Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID transcript_name strand transcript_status amino_acid_change ucsc_cons normal_depth normal_vaf tumor_depth tumor_vaf rna_depth rna_vaf polyphen sift condel domain AGRN 375790 genome.wustl.edu 37 1 986164 986164 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_198576.2 +1 validated p.R1734C 0.988 27 0% 29 20.7% 61 13.1% probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_LamG,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_1 AGRN 375790 genome.wustl.edu 37 1 986190 986190 + Missense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_198576.2 +1 validated p.D1742E 0.175 24 0% 20 45% 54 38.8% benign(0.003) tolerated(0.09) neutral(0.296) HMMSmart_LamG,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_1 AGRN 375790 genome.wustl.edu 37 1 987133 987133 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000419249 +1 known p.R166C 0.992 106 0.9% 111 45.9% 71 46.4% - - - superfamily_Concanavalin A-like lectins/glucanases DVL1 1855 genome.wustl.edu 37 1 1273682 1273682 + Nonsense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_004421.2 -1 reviewed p.Q467* 1.000 75 0% 69 17.4% 129 20.9% - - - HMMPfam_DEP,HMMSmart_DEP,superfamily_SSF46785 PLCH2 9651 genome.wustl.edu 37 1 2418745 2418745 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_014638.2 +1 provisional p.D348 1.000 137 0% 125 41.6% 2 0% - - - HMMPfam_PI-PLC-X,HMMSmart_SM00148,superfamily_PLC-like phosphodiesterases TP73 7161 genome.wustl.edu 37 1 3638591 3638591 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_005427.2 +1 reviewed p.P146S 1.000 299 0% 238 33.6% 0 - probably_damaging(0.999) tolerated(0.12) deleterious(0.751) superfamily_p53-like transcription factors,HMMPfam_P53 SPSB1 80176 genome.wustl.edu 37 1 9416592 9416592 + Silent SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_025106.3 +1 validated p.S214 0.998 249 0% 226 37.6% 11 45.4% - - - HMMPfam_SPRY,HMMSmart_SPRY MFN2 9927 genome.wustl.edu 37 1 12056351 12056351 + Frame_Shift_Del DEL C C - novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001127660.1 +1 reviewed p.S151fs 1.000 - - - - - - - - - HMMPfam_Dynamin_N,superfamily_P-loop containing nucleoside triphosphate hydrolases KAZ 23254 genome.wustl.edu 37 1 15430590 15430590 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_201628.2 +1 validated p.A651 0.037 65 0% 52 19.2% 0 - - - - HMMSmart_SM00454,superfamily_SAM/Pointed domain,HMMPfam_SAM_2 CASP9 842 genome.wustl.edu 37 1 15833559 15833559 + Silent SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001229.2 -1 reviewed p.L155 0.988 50 0% 48 27.1% 9 11.1% - - - HMMSmart_SM00115,superfamily_Caspase-like SLC25A34 284723 genome.wustl.edu 37 1 16065836 16065836 + Missense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_207348.1 +1 provisional p.L284I 1.000 47 0% 37 27% 0 - possibly_damaging(0.804) deleterious(0) deleterious(0.747) superfamily_Mitoch_carrier,HMMPfam_Mito_carr TMEM82 388595 genome.wustl.edu 37 1 16069549 16069549 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001013641.1 +1 provisional p.R66W 0.030 32 0% 59 20.3% 0 - probably_damaging(0.997) deleterious(0.01) deleterious(0.872) NULL NUDC 10726 genome.wustl.edu 37 1 27271945 27271945 + Missense_Mutation SNP T T A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_006600.2 +1 provisional p.I269N 1.000 118 0% 110 39.1% 199 47.2% probably_damaging(0.993) deleterious(0) deleterious(0.895) NULL C1orf38 9473 genome.wustl.edu 37 1 28206388 28206388 + Missense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001105556.1 +1 validated p.L157M 0.170 73 0% 97 20.6% 14 21.4% probably_damaging(0.962) deleterious(0) deleterious(0.850) NULL CSMD2 114784 genome.wustl.edu 37 1 34101980 34101980 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_052896.3 -1 validated p.N1610S 0.990 49 0% 45 40% 0 - benign(0.023) tolerated(0.3) neutral(0.030) HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain OSCP1 127700 genome.wustl.edu 37 1 36887751 36887751 + Missense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_145047.4 -1 validated p.Q283H 1.000 279 0% 256 26.6% 10 10% benign(0.006) tolerated(0.13) neutral(0.253) NULL RRAGC 64121 genome.wustl.edu 37 1 39318045 39318045 + Splice_Site SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_022157.2 -1 provisional e4+1 1.000 230 0% 122 15.6% 0 - - - - - ZMYND12 84217 genome.wustl.edu 37 1 42915663 42915663 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000433602 -1 known p.T7I 0.763 148 0% 149 20.1% 2 0% unknown(0) deleterious(0) - NULL RNF220 55182 genome.wustl.edu 37 1 45111129 45111129 + Nonsense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_018150.2 +1 validated p.Q472* 1.000 188 0% 147 24.5% 51 13.7% - - - NULL FAAH 2166 genome.wustl.edu 37 1 46874213 46874213 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001441.2 +1 reviewed p.A345V 0.999 146 0% 116 33.6% 14 21.4% probably_damaging(1) tolerated(0.07) deleterious(0.819) HMMPfam_Amidase,superfamily_Amidase_sig_enz GLIS1 148979 genome.wustl.edu 37 1 53986418 53986418 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_147193.2 -1 validated p.E364K 0.999 80 0% 92 20.7% 2 0% benign(0.325) deleterious(0.03) neutral(0.466) NULL ACOT11 26027 genome.wustl.edu 37 1 55050476 55050478 + In_Frame_Del DEL GTG GTG - novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 GTG GTG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_015547.2 +1 reviewed p.G62in_frame_del 0.999:0.032:0.998 - - - - - - - - - superfamily_Thioesterase/thiol ester dehydrase-isomerase LRRC7 57554 genome.wustl.edu 37 1 70573498 70573498 + Missense_Mutation SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_020794.2 +1 validated p.K1499E 1.000 334 0% 275 13.5% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like NEXN 91624 genome.wustl.edu 37 1 78383333 78383333 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_144573.3 +1 reviewed p.A37V 1.000 441 0% 324 42.9% 0 - benign(0.001) tolerated(0.1) neutral(0.286) NULL SPATA1 100505741 genome.wustl.edu 37 1 84988111 84988111 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001081472.1 +1 validated p.R83H 0.153 294 0% 135 51.9% 0 - - - - NULL LRRC8B 23507 genome.wustl.edu 37 1 90049813 90049813 + Missense_Mutation SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001134476.1 +1 validated p.Q535R 1.000 143 0% 113 51.3% 1 100% benign(0.004) tolerated(1) - superfamily_SSF52058 PTBP2 58155 genome.wustl.edu 37 1 97216992 97216992 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_021190.2 +1 reviewed p.D17 1.000 248 0% 149 32.2% 2 50% - - - NULL SNX7 51375 genome.wustl.edu 37 1 99156709 99156709 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_015976.3 +1 reviewed p.L148 1.000 395 0% 262 35.9% 2 100% - - - HMMPfam_PX,HMMSmart_PX,superfamily_PX AMPD2 271 genome.wustl.edu 37 1 110168976 110168976 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_004037.6 +1 validated p.R207Q 0.994 98 0% 69 53.6% 6 33.3% benign(0.001) tolerated(0.67) neutral(0.003) NULL GSTM3 2947 genome.wustl.edu 37 1 110280933 110280933 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_000849.4 -1 reviewed p.R82H 1.000 473 0.2% 411 41.4% 17 47% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_GST_N,superfamily_Thioredoxin-like RAP1A 5906 genome.wustl.edu 37 1 112246984 112246984 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001010935.1 +1 reviewed p.G115D 1.000 461 0% 354 37.3% 53 41.5% probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases CSDE1 7812 genome.wustl.edu 37 1 115277125 115277125 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001130523.1 -1 validated p.R189C 1.000 222 0% 184 23.4% 14 28.5% probably_damaging(0.999) tolerated(0.19) deleterious(0.540) NULL CHD1L 9557 genome.wustl.edu 37 1 146757118 146757118 + Missense_Mutation SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_004284.3 +1 validated p.I658V 0.000 304 0% 401 41.6% 20 55% benign(0.005) tolerated(0.3) neutral(0.029) NULL BCL9 607 genome.wustl.edu 37 1 147091587 147091587 + Silent SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_004326.2 +1 reviewed p.H542 0.494 43 0% 74 18.9% 13 38.4% - - - NULL BCL9 607 genome.wustl.edu 37 1 147092460 147092461 + Frame_Shift_Ins INS - - GC novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_004326.2 +1 reviewed p.P834fs 0.609:0.997 - - - - - - - - - NULL BCL9 607 genome.wustl.edu 37 1 147092464 147092464 + Missense_Mutation SNP C C G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_004326.2 +1 reviewed p.P835A 1.000 87 0% 132 15.9% 21 0% possibly_damaging(0.882) tolerated(0.7) neutral(0.346) NULL HIST2H2AB 317772 genome.wustl.edu 37 1 149859148 149859148 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_175065.2 -1 reviewed p.G107S 1.000 178 0% 254 25.2% 7 14.2% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMSmart_H2A,superfamily_Histone-fold CERS2 29956 genome.wustl.edu 37 1 150938708 150938708 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_022075.3 -1 reviewed p.E353 0.955 226 0% 393 43.3% 98 60.2% - - - NULL CRNN 49860 genome.wustl.edu 37 1 152383229 152383229 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_016190.2 -1 reviewed p.S110L 0.000 126 0% 210 24.8% 0 - benign(0.022) deleterious(0.01) neutral(0.407) NULL NUP210L 91181 genome.wustl.edu 37 1 154125309 154125309 + Silent SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_207308.2 -1 validated p.L81 1.000 385 0% 573 43.6% 0 - - - - NULL UBAP2L 9898 genome.wustl.edu 37 1 154221772 154221772 + Missense_Mutation SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_014847.3 +1 validated p.T358A 1.000 274 0% 525 10.5% 26 15.3% probably_damaging(0.995) tolerated(0.56) neutral(0.464) NULL LENEP 55891 genome.wustl.edu 37 1 154966229 154966231 + In_Frame_Del DEL TCC TCC - novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 TCC TCC Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_018655.2 +1 reviewed p.L51in_frame_del 0.996:1.000:1.000 - - - - - - - - - NULL MEF2D 4209 genome.wustl.edu 37 1 156437912 156437912 + Missense_Mutation SNP C C T rs111450230 byCluster;byFrequency TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_005920.2 -1 provisional p.G476E 0.946 59 0% 90 36.7% 42 45.2% benign(0.309) deleterious(0.01) deleterious(0.502) NULL HAPLN2 60484 genome.wustl.edu 37 1 156594141 156594141 + Splice_Site SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_021817.2 +1 validated e3-2 0.999 32 0% 41 22% 0 - - - - - CRP 1401 genome.wustl.edu 37 1 159683891 159683891 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_000567.2 -1 reviewed p.S33 0.000 145 0% 252 12.7% 0 - - - - HMMPfam_Pentaxin,HMMSmart_SM00159,superfamily_Concanavalin A-like lectins/glucanases TBX19 9095 genome.wustl.edu 37 1 168274287 168274287 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_005149.2 +1 reviewed p.A257T 0.329 239 0% 387 42.1% 2 0% benign(0.001) tolerated(0.44) neutral(0.013) NULL PAPPA2 60676 genome.wustl.edu 37 1 176525563 176525563 + Silent SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_020318.2 +1 validated p.V35 0.095 92 0% 170 11.8% 0 - - - - NULL CEP350 9857 genome.wustl.edu 37 1 180023593 180023593 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_014810.4 +1 reviewed p.R1740W 0.996 105 0% 161 25.5% 1 0% probably_damaging(1) deleterious(0) deleterious(0.945) NULL STX6 10228 genome.wustl.edu 37 1 180974490 180974490 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_005819.4 -1 validated p.E49K 1.000 495 0.2% 755 19.9% 19 21% probably_damaging(0.99) deleterious(0) deleterious(0.886) superfamily_t-snare proteins,HMMPfam_Syntaxin-6_N HMCN1 83872 genome.wustl.edu 37 1 186135359 186135359 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_031935.2 +1 reviewed p.C5121 1.000 231 0% 364 17.9% 4 0% - - - PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181,PatternScan_EGF_CA,superfamily_EGF/Laminin TPR 7175 genome.wustl.edu 37 1 186330946 186330946 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_003292.2 -1 reviewed p.H282R 1.000 577 0% 611 15.5% 2 0% possibly_damaging(0.815) tolerated(0.28) neutral(0.339) NULL TNNI1 7135 genome.wustl.edu 37 1 201380574 201380574 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_003281.3 -1 reviewed p.M123V 1.000 138 0% 283 13.1% 8 12.5% possibly_damaging(0.847) deleterious(0) deleterious(0.770) HMMPfam_Troponin LGR6 59352 genome.wustl.edu 37 1 202249926 202249926 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001017403.1 +1 reviewed p.R221H 0.677 265 0% 433 22.6% 2 0% benign(0.013) tolerated(0.16) neutral(0.060) HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00365,superfamily_RNI-like ADORA1 134 genome.wustl.edu 37 1 203098003 203098003 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_000674.2 +1 reviewed p.Y12H 1.000 62 0% 132 21.2% 1 0% probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_Family A G protein-coupled receptor-like PLXNA2 5362 genome.wustl.edu 37 1 208390487 208390487 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_025179.3 -1 reviewed p.E261K 1.000 109 0% 254 43.7% 4 25% benign(0) tolerated(1) - HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain ITPKB 3707 genome.wustl.edu 37 1 226924156 226924158 + In_Frame_Del DEL TCC TCC - novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 TCC TCC Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_002221.3 -1 reviewed p.E334in_frame_del 0.001:0.002:0.001 - - - - - - - - - NULL PSEN2 5664 genome.wustl.edu 37 1 227081780 227081780 + Missense_Mutation SNP G G C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_000447.2 +1 reviewed p.S382T 1.000 55 1.8% 105 33.3% 53 60.3% possibly_damaging(0.916) deleterious(0.04) deleterious(0.716) HMMPfam_Presenilin,HMMSmart_SM00730 LOC644006 644006 genome.wustl.edu 37 1 231157689 231157689 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c XM_929433.4 +1 model p.H111 0.870 197 0% 304 25% 0 - - - - NULL SDCCAG8 10806 genome.wustl.edu 37 1 243456500 243456500 + Silent SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_006642.2 +1 validated p.S218 0.007 188 0% 228 11.8% 6 0% - - - NULL ZNF496 84838 genome.wustl.edu 37 1 247473645 247473645 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_032752.1 -1 provisional p.Y255 0.079 146 0% 225 12% 7 0% - - - HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box OR2T3 343173 genome.wustl.edu 37 1 248637431 248637431 + Silent SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001005495.1 +1 provisional p.S260 0.008 581 0% 1069 26.4% 0 - - - - HMMPfam_7tm_1,superfamily_SSF81321 PXDN 7837 genome.wustl.edu 37 2 1652514 1652514 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_012293.1 -1 validated p.T1013I 1.000 37 0% 62 21% 2 0% possibly_damaging(0.789) deleterious(0.03) deleterious(0.660) HMMPfam_An_peroxidase,superfamily_Heme-dependent peroxidases RRM2 6241 genome.wustl.edu 37 2 10263941 10263941 + Missense_Mutation SNP T T G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001034.3 +1 reviewed p.F133V 1.000 224 0% 145 31% 5 0% probably_damaging(0.998) deleterious(0) deleterious(0.919) HMMPfam_Ribonuc_red_sm,superfamily_Ferritin/RR_like ROCK2 9475 genome.wustl.edu 37 2 11351885 11351885 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_004850.3 -1 reviewed p.K709E 1.000 665 0% 539 16.9% 2 0% probably_damaging(0.998) tolerated(0.09) deleterious(0.771) NULL GREB1 9687 genome.wustl.edu 37 2 11706687 11706687 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_014668.3 +1 reviewed p.V120A 1.000 72 0% 110 26.4% 2 100% probably_damaging(0.994) deleterious(0) deleterious(0.897) NULL APOB 338 genome.wustl.edu 37 2 21249763 21249763 + Missense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_000384.2 -1 reviewed p.S714I 1.000 273 0% 193 37.3% 0 - probably_damaging(0.999) - - HMMPfam_DUF1943,superfamily_Lipovitellin-phosvitin complex beta-sheet shell regions DPYSL5 56896 genome.wustl.edu 37 2 27165508 27165508 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_020134.3 +1 validated p.R444C 0.998 32 0% 37 13.5% 0 - probably_damaging(0.955) deleterious(0) deleterious(0.843) superfamily_Metalo_hydrolase LTBP1 4052 genome.wustl.edu 37 2 33500109 33500109 + Missense_Mutation SNP A A C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_206943.2 +1 reviewed p.I942L 1.000 278 0% 172 23.8% 2 0% benign(0.084) tolerated(0.73) neutral(0.007) PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMSmart_SM00181,PatternScan_EGF_2,HMMPfam_EGF_CA,superfamily_EGF/Laminin CALM2 805 genome.wustl.edu 37 2 47403610 47403610 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000456319 -1 known p.A14V 0.002 82 0% 75 49.3% 52 36.5% benign(0) - - NULL ANKRD36 375248 genome.wustl.edu 37 2 97851207 97851207 + Silent SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000461153 +1 known p.N667 0.001 752 0% 571 42.4% 0 - - - - NULL LONRF2 164832 genome.wustl.edu 37 2 100900774 100900774 + Nonsense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_198461.3 -1 validated p.E751* 0.001 51 0% 45 60% 3 100% - - - NULL IL18R1 8809 genome.wustl.edu 37 2 103012990 103012990 + Splice_Site SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_003855.2 +1 reviewed e10-1 1.000 137 0% 65 41.5% 0 - - - - - RGPD3 653489 genome.wustl.edu 37 2 107042525 107042525 + Silent SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001144013.1 -1 validated p.S875 1.000 663 0% 643 13.1% 1 0% - - - NULL BIN1 274 genome.wustl.edu 37 2 127809843 127809843 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_139343.1 -1 reviewed p.P453 0.997 28 0% 26 15.4% 1 0% - - - NULL HS6ST1 9394 genome.wustl.edu 37 2 129026019 129026019 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_004807.2 -1 reviewed p.Q318R 1.000 77 0% 89 38.2% 13 30.7% probably_damaging(0.955) tolerated(0.05) deleterious(0.744) HMMPfam_HS6ST LCT 3938 genome.wustl.edu 37 2 136566100 136566100 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_002299.2 -1 reviewed p.E1273K 1.000 334 0.3% 291 41.2% 1 0% probably_damaging(0.982) deleterious(0.01) deleterious(0.832) HMMPfam_Glyco_hydro_1,superfamily_Glyco_hydro_cat,PatternScan_GLYCOSYL_HYDROL_F1_1 LRP1B 53353 genome.wustl.edu 37 2 141072502 141072502 + Splice_Site SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_018557.2 -1 validated e83+2 1.000 227 0% 181 27.6% 0 - - - - - LRP1B 53353 genome.wustl.edu 37 2 141946116 141946116 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_018557.2 -1 validated p.N296S 1.000 209 0% 169 17.2% 7 28.5% probably_damaging(0.998) tolerated(0.06) deleterious(0.797) HMMPfam_Ldl_recept_b,HMMSmart_LY,superfamily_SSF63825 TNFAIP6 7130 genome.wustl.edu 37 2 152236046 152236048 + In_Frame_Del DEL AAA AAA - rs71403164 byCluster TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 AAA AAA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_007115.2 +1 reviewed p.*278in_frame_del 0.961:0.953 - - - - - - - - - NULL NEB 4703 genome.wustl.edu 37 2 152348642 152348642 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_004543.4 -1 reviewed p.R6487W 1.000 463 0% 345 38.6% 4 0% probably_damaging(1) - - NULL UPP2 151531 genome.wustl.edu 37 2 158978093 158978093 + Silent SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001135098.1 +1 validated p.L266 0.998 354 0% 199 41.2% 0 - - - - HMMPfam_PNP_UDP_1,superfamily_Purine and uridine phosphorylases XIRP2 129446 genome.wustl.edu 37 2 168099408 168099408 + Silent SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_152381.4 +1 validated p.Y502 1.000 112 0% 62 12.9% 0 - - - - NULL XIRP2 129446 genome.wustl.edu 37 2 168107703 168107703 + Missense_Mutation SNP G G T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_152381.4 +1 validated p.K3267N 0.000 45 0% 40 30% 0 - benign(0.013) tolerated(0.31) neutral(0.028) NULL LRP2 4036 genome.wustl.edu 37 2 170072889 170072889 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_004525.2 -1 reviewed p.I1900 0.996 261 0% 229 12.2% 0 - - - - HMMPfam_Ldl_recept_b,HMMSmart_LY,superfamily_SSF63825 OLA1 29789 genome.wustl.edu 37 2 174945897 174945897 + Splice_Site SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000424954 -1 known e8-1 1.000 233 0% 192 21.9% 369 25.2% probably_damaging(1) deleterious(0) deleterious(0.945) - TTN 7273 genome.wustl.edu 37 2 179451274 179451274 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000356127 -1 known p.P18882S 1.000 167 0% 143 33.6% 0 - benign(0.27) - - HMMPfam_fn3 TTN 7273 genome.wustl.edu 37 2 179482698 179482698 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000356127 -1 known p.V13226I 0.705 164 0% 168 33.3% 3 100% benign(0.049) - - HMMPfam_fn3,HMMSmart_SM00060 TTN 7273 genome.wustl.edu 37 2 179523751 179523751 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000356127 -1 known p.P10574 0.605 678 0% 487 21.4% 0 - - - - HMMPfam_PPAK GTF3C3 9330 genome.wustl.edu 37 2 197657782 197657782 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_012086.2 -1 provisional p.E103 0.968 176 0% 129 40.3% 3 100% - - - NULL UNC80 285175 genome.wustl.edu 37 2 210737624 210737624 + Missense_Mutation SNP C C G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_032504.1 +1 validated p.P1259R 1.000 107 0% 63 22.2% 0 - probably_damaging(0.998) deleterious(0.01) deleterious(0.880) NULL CPS1 1373 genome.wustl.edu 37 2 211421567 211421567 + Missense_Mutation SNP G G T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001122633.1 +1 reviewed p.R43M 1.000 248 0% 156 16% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL FN1 2335 genome.wustl.edu 37 2 216269244 216269244 + Nonsense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_212482.1 -1 reviewed p.Q1041* 1.000 166 0% 142 45.1% 0 - - - - HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III UGT1A3 54659 genome.wustl.edu 37 2 234638044 234638044 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_019093.2 +1 reviewed p.R91H 0.001 240 0% 187 36.9% 0 - benign(0) tolerated(0.15) neutral(0.241) HMMPfam_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase HDLBP 3069 genome.wustl.edu 37 2 242179085 242179085 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_005336.3 -1 validated p.T848A 1.000 95 0% 100 34% 86 45.3% benign(0.011) deleterious(0.04) neutral(0.349) HMMSmart_KH,HMMPfam_KH_1,superfamily_SSF54791 CPNE9 151835 genome.wustl.edu 37 3 9767710 9767710 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_153635.2 +1 validated p.T440M 0.971 355 0% 285 15.4% 0 - benign(0.014) tolerated(0.1) neutral(0.287) HMMSmart_VWA,HMMPfam_Copine,superfamily_SSF53300 TSEN2 80746 genome.wustl.edu 37 3 12571271 12571273 + In_Frame_Del DEL ATT ATT - novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 ATT ATT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001145392.1 +1 reviewed p.I384in_frame_del 0.994:0.980:0.003 - - - - - - - - - HMMPfam_tRNA_int_endo,superfamily_tRNA-intron endonuclease catalytic domain-like GALNTL2 117248 genome.wustl.edu 37 3 16254206 16254213 + Frame_Shift_Del DEL CCTGGCTG CCTGGCTG - novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 CCTGGCTG CCTGGCTG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_054110.4 +1 validated p.T443fs 1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000 - - - - - - - - - superfamily_SSF53448 THRB 7068 genome.wustl.edu 37 3 24231704 24231704 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_000461.4 -1 reviewed p.T48 0.000 530 0.2% 432 38.4% 0 - - - - NULL C3orf35 339883 genome.wustl.edu 37 3 37458906 37458906 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_178339.2 +1 validated p.R50Q 0.000 245 0% 199 42.2% 0 - benign(0.004) - - NULL CSRNP1 64651 genome.wustl.edu 37 3 39184627 39184627 + Silent SNP G G T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_033027.3 -1 reviewed p.A563 0.000 34 0% 44 34.1% 13 46.1% - - - NULL CCR8 1237 genome.wustl.edu 37 3 39374672 39374672 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_005201.3 +1 reviewed p.V284I 0.776 277 0.4% 189 41.8% 0 - benign(0.056) deleterious(0.04) neutral(0.352) HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like LIMD1 8994 genome.wustl.edu 37 3 45718491 45718491 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_014240.2 +1 validated p.C657 1.000 148 0% 137 14.6% 0 - - - - HMMPfam_LIM,HMMSmart_LIM SCAP 22937 genome.wustl.edu 37 3 47476517 47476517 + Missense_Mutation SNP G G T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_012235.2 -1 reviewed p.P78H 0.014 261 0% 182 37.9% 8 25% benign(0.027) tolerated(0.15) neutral(0.242) NULL CELSR3 1951 genome.wustl.edu 37 3 48694505 48694505 + Missense_Mutation SNP G G T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001407.2 -1 reviewed p.A1342D 0.096 46 0% 46 41.3% 0 - benign(0) tolerated(0.19) neutral(0.050) NULL CELSR3 1951 genome.wustl.edu 37 3 48694515 48694515 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001407.2 -1 reviewed p.G1339R 0.608 62 0% 58 36.2% 0 - probably_damaging(0.998) tolerated(0.19) deleterious(0.524) NULL ARIH2 10425 genome.wustl.edu 37 3 48965057 48965058 + In_Frame_Ins INS - - GAA novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_006321.2 +1 provisional p.26in_frame_insE 0.989:1.000 - - - - - - - - - NULL BSN 8927 genome.wustl.edu 37 3 49662497 49662497 + Missense_Mutation SNP G G C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_003458.3 +1 reviewed p.G105A 1.000 60 0% 72 38.9% 0 - possibly_damaging(0.891) - - NULL GRM2 2912 genome.wustl.edu 37 3 51747287 51747287 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_000839.3 +1 reviewed p.R417C 0.989 26 0% 35 48.6% 0 - probably_damaging(0.996) deleterious(0.01) deleterious(0.867) HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I GNL3 26354 genome.wustl.edu 37 3 52721366 52721368 + In_Frame_Del DEL TCT TCT - novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 TCT TCT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_014366.4 +1 validated p.L61in_frame_del 0.821:0.845:0.996 - - - - - - - - - HMMPfam_GN3L_Grn1 FLNB 2317 genome.wustl.edu 37 3 58148908 58148908 + Missense_Mutation SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001457.3 +1 reviewed p.H2350R 1.000 245 0% 202 19.3% 28 28.5% possibly_damaging(0.794) tolerated(1) neutral(0.298) HMMSmart_IG_FLMN,superfamily_Ig_E-set,HMMPfam_Filamin PSMD6 9861 genome.wustl.edu 37 3 64008103 64008103 + Missense_Mutation SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_014814.1 -1 provisional p.L81S 1.000 500 0% 490 38.6% 47 38.2% probably_damaging(0.974) deleterious(0) deleterious(0.861) HMMPfam_RPN7 PRICKLE2 166336 genome.wustl.edu 37 3 64132683 64132683 + Silent SNP G G T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_198859.3 -1 validated p.R495 0.997 173 0% 158 17.7% 0 - - - - NULL FOXP1 27086 genome.wustl.edu 37 3 71247379 71247379 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_032682.4 -1 reviewed p.A52T 0.993 45 0% 41 58.5% 12 33.3% benign(0.004) tolerated(0.13) neutral(0.253) NULL SIDT1 54847 genome.wustl.edu 37 3 113251993 113251993 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_017699.2 +1 validated p.A42V 0.287 29 0% 28 21.4% 2 50% benign(0.002) tolerated(0.33) neutral(0.024) NULL POLQ 10721 genome.wustl.edu 37 3 121263679 121263679 + Missense_Mutation SNP C C G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_199420.3 -1 validated p.V80L 1.000 504 0% 272 34.6% 0 - possibly_damaging(0.485) tolerated(0.2) neutral(0.210) superfamily_P-loop containing nucleoside triphosphate hydrolases MCM2 4171 genome.wustl.edu 37 3 127327730 127327730 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_004526.2 +1 reviewed p.G431D 1.000 210 0% 202 41.1% 8 12.5% probably_damaging(0.998) deleterious(0) deleterious(0.919) HMMSmart_MCM,superfamily_Nucleic_acid_OB COPG1 22820 genome.wustl.edu 37 3 128990639 128990639 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_016128.3 +1 validated p.G625S 0.000 176 0% 195 15.4% 90 15.5% benign(0) tolerated(0.73) neutral(0.002) superfamily_Clathrin adaptor appendage domain,HMMPfam_Gamma-COP NME9 347736 genome.wustl.edu 37 3 138023757 138023757 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_178130.2 -1 provisional p.G189D 1.000 106 0% 100 37% 2 0% probably_damaging(1) deleterious(0.03) deleterious(0.865) HMMPfam_NDK,HMMSmart_NDK,superfamily_NDK RASA2 5922 genome.wustl.edu 37 3 141277769 141277769 + Missense_Mutation SNP G G T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_006506.2 +1 reviewed p.Q242H 1.000 156 0% 100 20% 4 25% benign(0.001) tolerated(0.14) neutral(0.249) HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB ATR 545 ucsc.edu 37 3 142217557 142217557 + Frame_Shift_Del DEL T - - novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001184.3 -1 reviewed p.R1814fs 1 - - - - - - - - - HMMPfam_FAT,superfamily_ARM repeat,superfamily_TPR-like ATR 545 genome.wustl.edu 37 3 142285036 142285036 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001184.3 -1 reviewed p.Q73 1.000 205 0% 166 34.9% 1 100% - - - NULL TRIM59 286827 genome.wustl.edu 37 3 160155852 160155853 + Frame_Shift_Del DEL TT TT - novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 TT TT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_173084.2 -1 validated p.S374fs 0.937:0.936 - - - - - - - - - NULL RTP1 132112 genome.wustl.edu 37 3 186917829 186917829 + Missense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_153708.2 +1 validated p.L255M 1.000 99 0% 120 21.7% 0 - probably_damaging(0.998) deleterious(0) deleterious(0.919) NULL CCDC50 152137 genome.wustl.edu 37 3 191074905 191074905 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_178335.2 +1 reviewed p.D26 1.000 642 0% 537 44.1% 10 20% - - - NULL FAM157A 728262 genome.wustl.edu 37 3 197880210 197880210 + Missense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001145248.1 +1 inferred p.L97M 0.026 314 0% 253 12.6% 0 - unknown(0) deleterious(0) - NULL CRIPAK 285464 genome.wustl.edu 37 4 1388539 1388539 + Silent SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_175918.3 +1 validated p.P80 0.000 196 0% 207 17.9% 14 14.2% - - - NULL EVC 2121 genome.wustl.edu 37 4 5754687 5754687 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_153717.2 +1 reviewed p.A408V 0.019 72 0% 73 30.1% 0 - unknown(0) tolerated(0.13) - NULL WFS1 7466 genome.wustl.edu 37 4 6302497 6302497 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000506362 +1 known p.T203M 0.998 459 0% 508 15.9% 3 0% - - - NULL ABLIM2 84448 genome.wustl.edu 37 4 8098906 8098906 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001130083.1 -1 validated p.C86 0.999 34 0% 49 34.7% 0 - - - - HMMPfam_LIM,HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,superfamily_Glucocorticoid receptor-like (DNA-binding domain) BOD1L 259282 genome.wustl.edu 37 4 13604214 13604214 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_148894.2 -1 validated p.G1437D 0.000 251 0% 171 40.4% 1 100% benign(0.023) tolerated(0.18) neutral(0.057) superfamily_SSF81995 ENAM 10117 genome.wustl.edu 37 4 71508607 71508607 + Silent SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_031889.2 +1 reviewed p.V488 0.770 96 0% 50 16% 0 - - - - NULL SHROOM3 57619 genome.wustl.edu 37 4 77357335 77357335 + Missense_Mutation SNP G G T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_020859.3 +1 validated p.G44C 1.000 430 0% 340 44.7% 5 80% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like SEC31A 22872 genome.wustl.edu 37 4 83778843 83778843 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000507828 -1 known p.G184R 0.935 286 0% 230 21.3% 3 33.3% - - - NULL PDHA2 5161 genome.wustl.edu 37 4 96762309 96762309 + Silent SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_005390.4 +1 validated p.I336 0.659 160 0% 158 39.2% 0 - - - - HMMPfam_E1_dh,superfamily_SSF52518 SLC9B2 133308 genome.wustl.edu 37 4 103970157 103970157 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_178833.4 -1 validated p.G202 0.992 191 0% 152 39.5% 1 0% - - - HMMPfam_Na_H_Exchanger TACR3 6870 genome.wustl.edu 37 4 104579486 104579486 + Nonsense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001059.1 -1 reviewed p.W208* 1.000 333 0% 264 20.8% 0 - - - - HMMPfam_7tm_1,superfamily_SSF81321 FAT4 79633 genome.wustl.edu 37 4 126372285 126372285 + Missense_Mutation SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_024582.4 +1 validated p.K3372E 1.000 192 0% 156 41% 0 - benign(0.313) tolerated(0.08) neutral(0.397) HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like LARP1B 55132 genome.wustl.edu 37 4 129127662 129127662 + Nonsense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_018078.2 +1 reviewed p.Q797* 1.000 180 0% 87 25.3% 0 - - - - HMMSmart_SM00684 HHIP 64399 genome.wustl.edu 37 4 145658914 145658914 + Splice_Site SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_022475.1 +1 reviewed e13-2 1.000 231 0% 217 33.2% 0 - - - - - DCHS2 54798 genome.wustl.edu 37 4 155156254 155156254 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_017639.3 -1 validated p.P2729S 0.000 244 0% 237 44.3% 0 - benign(0) tolerated(0.32) neutral(0.024) NULL PLRG1 5356 genome.wustl.edu 37 4 155461175 155461175 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_002669.2 -1 provisional p.H324Y 1.000 455 0% 324 37% 29 51.7% possibly_damaging(0.818) tolerated(0.08) deleterious(0.609) HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40 PLRG1 5356 genome.wustl.edu 37 4 155463420 155463420 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_002669.2 -1 provisional p.G202 0.984 251 0% 181 34.3% 12 41.6% - - - HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40 TMA16 55319 genome.wustl.edu 37 4 164428216 164428216 + Frame_Shift_Del DEL G G - rs34907234 byCluster;byFrequency;by1000genomes TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_018352.2 +1 validated p.E13fs 0.840 - - - - - - - - - NULL CLCN3 1182 genome.wustl.edu 37 4 170618569 170618569 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_173872.2 +1 validated p.R416H 1.000 258 0% 227 53.3% 1 100% possibly_damaging(0.563) deleterious(0.03) deleterious(0.557) HMMPfam_Voltage_CLC,superfamily_Cl-channel_core MTNR1A 4543 genome.wustl.edu 37 4 187476403 187476403 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000509111 -1 known p.W21* 1.000 21 0% 34 29.4% 0 - - - - NULL TRIO 7204 genome.wustl.edu 37 5 14406753 14406753 + Missense_Mutation SNP C C T rs55687522 TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_007118.2 +1 validated p.T1644M 1.000 91 0% 76 60.5% 2 0% unknown(0) tolerated(0.09) - superfamily_SH3-domain RAD1 5810 genome.wustl.edu 37 5 34914997 34914997 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_002853.3 -1 reviewed p.M1V 0.974 97 0% 85 38.8% 16 37.5% possibly_damaging(0.46) deleterious(0) deleterious(0.596) NULL RICTOR 253260 genome.wustl.edu 37 5 38950098 38950098 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_152756.3 -1 validated p.S1284 0.449 156 0% 126 34.1% 2 0% - - - superfamily_ARM repeat ITGA2 3673 genome.wustl.edu 37 5 52385816 52385816 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_002203.3 +1 reviewed p.V1130A 0.988 413 0% 260 38.1% 0 - possibly_damaging(0.873) deleterious(0) deleterious(0.784) superfamily_Integrin domains MTX3 345778 genome.wustl.edu 37 5 79286054 79286054 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001010891.4 -1 validated p.V53I 1.000 351 0% 210 39.5% 0 - benign(0.104) deleterious(0.05) neutral(0.353) HMMPfam_Tom37 XRCC4 7518 genome.wustl.edu 37 5 82400845 82400845 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_022406.2 +1 reviewed p.L36P 1.000 250 0% 159 40.9% 4 0% probably_damaging(0.997) deleterious(0) deleterious(0.911) superfamily_XRCC4 N-terminal domain,HMMPfam_XRCC4 ERAP1 51752 genome.wustl.edu 37 5 96139461 96139461 + Missense_Mutation SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_016442.3 -1 validated p.Y57H 0.000 433 0% 421 14.3% 1 0% benign(0) tolerated(0.54) neutral(0.007) HMMPfam_Peptidase_M1,superfamily_SSF63737 FEM1C 56929 genome.wustl.edu 37 5 114879071 114879071 + Silent SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_020177.2 -1 validated p.N40 0.419 80 0% 96 16.7% 3 33.3% - - - HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK MEGF10 84466 genome.wustl.edu 37 5 126746208 126746208 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_032446.2 +1 validated p.R349C 0.185 130 0% 142 43% 0 - benign(0.188) tolerated(0.06) neutral(0.340) HMMSmart_SM00180,HMMSmart_SM00181,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_EGF/Laminin KDM3B 51780 genome.wustl.edu 37 5 137722304 137722304 + Silent SNP G G T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_016604.3 +1 validated p.S458 0.994 101 0% 99 39.4% 0 - - - - NULL WDR55 54853 genome.wustl.edu 37 5 140049100 140049100 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_017706.4 +1 validated p.R338H 1.000 144 0% 134 17.2% 15 13.3% probably_damaging(0.999) tolerated(0.08) deleterious(0.790) NULL PCDHA2 56146 genome.wustl.edu 37 5 140175986 140175986 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_018905.2 +1 reviewed p.A479 0.020 99 0% 127 37% 1 100% - - - HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like PCDHB6 56130 genome.wustl.edu 37 5 140531158 140531158 + Silent SNP C C T rs146356849 by1000genomes TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_018939.2 +1 reviewed p.S440 0.365 189 0% 202 36.6% 3 0% - - - HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin PCDHB6 56130 genome.wustl.edu 37 5 140531242 140531242 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_018939.2 +1 reviewed p.I468 0.009 142 0% 153 50.3% 16 50% - - - HMMPfam_Cadherin,superfamily_Cadherin PCDHGA6 56109 genome.wustl.edu 37 5 140754086 140754086 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_018919.2 +1 reviewed p.A146T 0.472 102 1% 69 33.3% 0 - benign(0.001) tolerated(0.34) neutral(0.023) HMMPfam_Cadherin,superfamily_Cadherin-like PCDHGA7 56108 genome.wustl.edu 37 5 140762611 140762611 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_018920.2 +1 reviewed p.A49T 1.000 45 0% 53 43.4% 0 - benign(0.077) deleterious(0.03) neutral(0.370) HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like ARHGAP26 23092 genome.wustl.edu 37 5 142283115 142283115 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_015071.4 +1 reviewed p.R238H 1.000 114 0% 54 38.9% 0 - possibly_damaging(0.488) tolerated(0.33) neutral(0.186) NULL PPARGC1B 133522 genome.wustl.edu 37 5 149216388 149216389 + Frame_Shift_Del DEL TG TG - novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 TG TG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_133263.3 +1 reviewed p.V791fs 0.062:0.957 - - - - - - - - - NULL PDGFRB 5159 genome.wustl.edu 37 5 149497407 149497407 + Missense_Mutation SNP G G T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_002609.3 -1 reviewed p.Q971K 1.000 120 0.8% 106 49.1% 4 25% benign(0.002) tolerated(0.45) neutral(0.012) NULL KIF4B 285643 genome.wustl.edu 37 5 154395704 154395704 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001099293.1 +1 provisional p.R762H 1.000 184 0% 135 31.1% 0 - possibly_damaging(0.444) tolerated(0.73) neutral(0.146) NULL C5orf52 100190949 genome.wustl.edu 37 5 157098685 157098685 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001145132.1 +1 validated p.T21 0.001 7 0.000 13 0.385 0 - - - - NULL ENSG00000241956 0 genome.wustl.edu 37 5 164028109 164028109 + RNA SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000486913 +1 known NULL 1.000 68 0% 74 10.8% 0 - - - - - TMED9 54732 genome.wustl.edu 37 5 177022352 177022352 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_017510.4 +1 validated p.V215M 1.000 82 0% 65 20% 193 22.7% possibly_damaging(0.949) deleterious(0.01) deleterious(0.798) HMMPfam_EMP24_GP25L HIVEP1 3096 genome.wustl.edu 37 6 12164036 12164036 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_002114.2 +1 validated p.G2500D 1.000 86 0% 90 35.6% 4 25% probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL JARID2 3720 genome.wustl.edu 37 6 15508607 15508607 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_004973.2 +1 reviewed p.F923S 1.000 394 0% 311 44.1% 2 50% probably_damaging(0.997) deleterious(0) deleterious(0.911) HMMSmart_SM00558,HMMPfam_JmjC MRS2 57380 genome.wustl.edu 37 6 24412567 24412567 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_020662.2 +1 validated p.V178I 0.999 505 0% 376 38.3% 14 64.2% probably_damaging(0.991) tolerated(0.21) deleterious(0.488) HMMPfam_CorA HFE 3077 genome.wustl.edu 37 6 26093075 26093075 + Missense_Mutation SNP G G T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_000410.3 +1 reviewed p.G260V 1.000 183 0% 179 15.6% 1 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_C1-set,HMMSmart_SM00407,superfamily_Immunoglobulin HIST1H2BG 8339 genome.wustl.edu 37 6 26216772 26216772 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_003518.3 -1 reviewed p.R34C 1.000 424 0% 366 40.2% 8 37.5% unknown(0) deleterious(0.04) - HMMSmart_SM00427,HMMPfam_Histone,superfamily_Histone-fold HIST1H2AJ 8331 genome.wustl.edu 37 6 27782476 27782476 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_021066.2 -1 reviewed p.A15T 1.000 128 0% 80 27.5% 2 50% unknown(0) deleterious(0.01) - HMMSmart_SM00414,superfamily_Histone-fold TNXB 7148 genome.wustl.edu 37 6 32064811 32064811 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_019105.6 -1 reviewed p.D273 0.564 67 0% 95 16.8% 0 - - - - HMMSmart_SM00181,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,superfamily_EGF/Laminin FANCE 2178 genome.wustl.edu 37 6 35430691 35430691 + Silent SNP C C T rs147166240 by1000genomes TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_021922.2 +1 reviewed p.N503 0.000 111 0% 105 40% 1 100% - - - NULL PIM1 5292 genome.wustl.edu 37 6 37141801 37141801 + Missense_Mutation SNP T T A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_002648.3 +1 validated p.D292E 0.951 87 0% 71 33.8% 64 39% benign(0) tolerated(0.68) neutral(0.002) superfamily_Protein kinase-like (PK-like) MEP1A 4224 genome.wustl.edu 37 6 46801256 46801256 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_005588.2 +1 validated p.S530 0.000 90 0% 94 19.1% 0 - - - - HMMPfam_MATH,HMMSmart_MATH,superfamily_Traf_like HMGCLL1 54511 genome.wustl.edu 37 6 55443827 55443827 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_019036.2 -1 validated p.K9 1.000 23 0% 41 43.9% 0 - - - - NULL PHF3 23469 genome.wustl.edu 37 6 64356462 64356462 + Silent SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_015153.2 +1 provisional p.D2 1.000 114 0% 79 11.4% 1 0% - - - NULL FAM135A 57579 genome.wustl.edu 37 6 71235370 71235370 + Silent SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001105531.2 +1 validated p.P665 0.997 126 0% 69 39.1% 5 60% - - - NULL HTR1E 3354 genome.wustl.edu 37 6 87725545 87725545 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_000865.2 +1 validated p.R165C 0.318 123 0% 122 44.3% 0 - benign(0.005) deleterious(0.02) neutral(0.383) HMMPfam_7tm_1,superfamily_SSF81321 MICAL1 64780 genome.wustl.edu 37 6 109773792 109773792 + Missense_Mutation SNP G G T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_022765.3 -1 validated p.P200T 1.000 50 0% 52 55.8% 5 40% probably_damaging(0.987) deleterious(0) deleterious(0.881) superfamily_FAD/NAD(P)-binding domain LAMA4 3910 genome.wustl.edu 37 6 112575086 112575086 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001105208.1 -1 reviewed p.F89 0.000 137 0% 105 32.4% 13 15.3% - - - NULL DSE 29940 genome.wustl.edu 37 6 116754598 116754598 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001080976.1 +1 reviewed p.R335C 1.000 251 0% 217 40.1% 1 100% probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL EPB41L2 2037 genome.wustl.edu 37 6 131190992 131190992 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001431.3 -1 validated p.Y773C 0.001 245 0% 285 16.5% 7 0% probably_damaging(0.974) tolerated(0.21) neutral(0.460) NULL IPCEF1 26034 genome.wustl.edu 37 6 154533925 154533925 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001130699.1 -1 validated p.H172 0.003 447 0% 372 18.5% 1 0% - - - NULL RSPH3 83861 genome.wustl.edu 37 6 159420727 159420728 + Frame_Shift_Ins INS - - A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_031924.4 -1 validated p.P96fs 0.515:0.515 - - - - - - - - - NULL PNLDC1 154197 genome.wustl.edu 37 6 160221854 160221854 + Nonsense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_173516.1 +1 provisional p.Q32* 0.997 214 0% 248 47.2% 0 - - - - superfamily_Ribonuclease H-like TMEM184A 202915 genome.wustl.edu 37 7 1588260 1588260 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001097620.1 -1 validated p.A237T 1.000 406 0.2% 432 10.6% 13 0% possibly_damaging(0.892) deleterious(0.01) deleterious(0.757) HMMPfam_DUF300 GNA12 2768 genome.wustl.edu 37 7 2771110 2771110 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_007353.2 -1 validated p.K284R 1.000 155 0% 179 21.2% 4 0% probably_damaging(0.989) tolerated(0.57) neutral(0.446) HMMPfam_G-alpha,superfamily_SSF52540 TNRC18 84629 genome.wustl.edu 37 7 5352184 5352184 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001080495.2 -1 provisional p.A2780T 1.000 18 0% 33 33.3% 100 15% possibly_damaging(0.845) - - NULL GRID2IP 392862 genome.wustl.edu 37 7 6547758 6547758 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001145118.1 -1 validated p.P801L 0.994 4 0.000 8 0.875 1 100% probably_damaging(0.998) deleterious(0.01) deleterious(0.880) superfamily_FH2_actin_bd LOC100131257 100131257 genome.wustl.edu 37 7 7118413 7118413 + Missense_Mutation SNP G G T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c XM_001716696.1 -1 model p.P264H 0.967 51 0% 46 21.7% 0 - - - - superfamily_C2H2 and C2HC zinc fingers FAM126A 84668 genome.wustl.edu 37 7 22985626 22985626 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_032581.3 -1 reviewed p.R383Q 1.000 196 0% 137 21.2% 4 100% possibly_damaging(0.868) tolerated(0.14) deleterious(0.587) NULL HOXA10 3206 genome.wustl.edu 37 7 27211692 27211694 + In_Frame_Del DEL CTT CTT - novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 CTT CTT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_018951.3 -1 reviewed p.K353in_frame_del 1.000:1.000:1.000 - - - - - - - - - HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like SFRP4 6424 genome.wustl.edu 37 7 37951817 37951817 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_003014.3 -1 reviewed p.R232Q 0.983 467 0% 469 13.9% 123 0% benign(0.172) deleterious(0.01) neutral(0.421) superfamily_TIMP_like,HMMPfam_NTR,HMMSmart_C345C ZNF736 728927 genome.wustl.edu 37 7 63808690 63808690 + Missense_Mutation SNP G G T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000423484 +1 known p.C150F 0.999 531 0% 345 36.8% 0 - probably_damaging(0.999) deleterious(0.02) deleterious(0.873) superfamily_C2H2 and C2HC zinc fingers TYW1 55253 genome.wustl.edu 37 7 66703426 66703426 + Nonsense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_018264.2 +1 validated p.W703* 1.000 563 0.2% 479 38.6% 10 70% - - - NULL ELN 2006 genome.wustl.edu 37 7 73480308 73480308 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_000501.2 +1 reviewed p.A689 0.423 230 0% 168 31% 4 25% - - - NULL MAGI2 9863 genome.wustl.edu 37 7 77973181 77973181 + Missense_Mutation SNP A A T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_012301.3 -1 reviewed p.I441N 1.000 382 0% 316 16.1% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like SEMA3D 223117 genome.wustl.edu 37 7 84642151 84642151 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_152754.2 -1 validated p.R572H 1.000 277 0% 183 38.3% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_PSI,superfamily_Plexin-like_fold ABCB1 5243 genome.wustl.edu 37 7 87179168 87179168 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_000927.3 -1 reviewed p.H518R 0.988 368 0% 302 19.2% 0 - benign(0.014) tolerated(0.14) neutral(0.250) HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases SAMD9L 219285 genome.wustl.edu 37 7 92763172 92763172 + Missense_Mutation SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_152703.2 -1 validated p.Y705H 0.995 46 0% 42 47.6% 0 - probably_damaging(0.991) tolerated(0.16) deleterious(0.504) NULL ASB4 51666 genome.wustl.edu 37 7 95157343 95157343 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_016116.1 +1 reviewed p.R236C 1.000 88 0% 92 55.4% 0 - probably_damaging(1) tolerated(0.14) deleterious(0.750) HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat TRRAP 8295 genome.wustl.edu 37 7 98529083 98529083 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_003496.2 +1 validated p.R1216Q 1.000 69 0% 72 16.7% 2 0% possibly_damaging(0.855) deleterious(0.01) deleterious(0.736) superfamily_ARM repeat TRRAP 8295 genome.wustl.edu 37 7 98547410 98547410 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_003496.2 +1 validated p.A1669V 1.000 59 0% 56 46.4% 3 33.3% benign(0.428) tolerated(0.51) neutral(0.148) superfamily_ARM repeat TRRAP 8295 genome.wustl.edu 37 7 98591318 98591318 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000456197 +1 known p.S3050L 1.000 653 0.5% 509 37.3% 11 9% - - - superfamily_ARM repeat ZNF3 7551 genome.wustl.edu 37 7 99668911 99668911 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_032924.3 -1 validated p.S399N 0.676 312 0.3% 279 38.7% 15 40% benign(0.009) tolerated(0.67) neutral(0.003) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 C7orf43 55262 genome.wustl.edu 37 7 99754149 99754149 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_018275.3 -1 predicted p.R367H 1.000 198 0% 175 36% 25 60% probably_damaging(0.999) deleterious(0.01) deleterious(0.896) NULL MUC12 10071 genome.wustl.edu 37 7 100635320 100635320 + Silent SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000379442 +1 known p.K635 0.025 347 0% 378 18.3% 0 - - - - NULL MUC17 140453 genome.wustl.edu 37 7 100677699 100677699 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001040105.1 +1 provisional p.S1001N 0.031 405 0% 524 45.2% 0 - unknown(0) - - NULL PIK3CG 5294 genome.wustl.edu 37 7 106513168 106513168 + Missense_Mutation SNP T T A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_002649.2 +1 reviewed p.I691N 1.000 307 0% 246 42.7% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_PI3Ka,HMMSmart_SM00145,superfamily_ARM repeat PTPRZ1 5803 genome.wustl.edu 37 7 121676699 121676699 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_002851.2 +1 reviewed p.G1777D 1.000 260 0% 170 17.1% 2 0% probably_damaging(1) tolerated(0.25) deleterious(0.537) HMMPfam_Y_phosphatase,HMMSmart_SM00194,superfamily_(Phosphotyrosine protein) phosphatases II CADPS2 93664 genome.wustl.edu 37 7 121985636 121985636 + Missense_Mutation SNP A A T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_017954.10 -1 reviewed p.L1202I 0.826 624 0% 458 35.6% 31 51.6% benign(0.006) tolerated(0.14) neutral(0.249) NULL GCC1 79571 genome.wustl.edu 37 7 127223206 127223206 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_024523.5 -1 reviewed p.R397H 1.000 99 0% 94 53.2% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) NULL LRRC4 64101 genome.wustl.edu 37 7 127670301 127670301 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_022143.4 -1 validated p.F131 0.995 185 0% 186 43% 5 40% - - - HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_L domain-like JHDM1D 80853 genome.wustl.edu 37 7 139796398 139796398 + Silent SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000472616 -1 known p.M372T 0.021 393 0% 334 43.1% 2 100% - - - NULL ABP1 26 genome.wustl.edu 37 7 150555997 150555997 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001091.2 +1 reviewed p.L573 0.463 33 0% 32 21.9% 1 0% - - - HMMPfam_Cu_amine_oxid,superfamily_Amine oxidase catalytic domain AGAP3 116988 genome.wustl.edu 37 7 150840945 150840945 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_031946.4 +1 validated p.C884Y 0.976 19 0% 22 22.7% 142 14.7% benign(0.001) tolerated(1) - NULL SMARCD3 6604 genome.wustl.edu 37 7 150937219 150937221 + In_Frame_Del DEL CTC CTC - novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 CTC CTC Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001003801.1 -1 reviewed p.E384in_frame_del 1.000:1.000:1.000 - - - - - - - - - NULL CSMD1 64478 genome.wustl.edu 37 8 2944677 2944677 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_033225.5 -1 validated p.T2473 0.309 237 0% 186 20.4% 0 - - - - HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain SGK223 157285 genome.wustl.edu 37 8 8185832 8185832 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001080826.1 -1 validated p.S820 1.000 117 0% 118 50.8% 0 - - - - NULL SLC7A2 6542 genome.wustl.edu 37 8 17412565 17412565 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_003046.5 +1 validated p.A429V 1.000 335 0% 284 34.5% 0 - probably_damaging(0.999) deleterious(0.03) deleterious(0.855) HMMPfam_AA_permease MTUS1 57509 genome.wustl.edu 37 8 17611238 17611238 + Silent SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001001924.2 -1 reviewed p.G693 0.001 339 0% 183 37.2% 1 100% - - - NULL DOCK5 80005 genome.wustl.edu 37 8 25136110 25136110 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_024940.6 +1 validated p.E84K 0.997 244 0% 246 41.5% 0 - probably_damaging(0.979) deleterious(0.02) deleterious(0.805) NULL CDCA2 157313 genome.wustl.edu 37 8 25364100 25364100 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_152562.2 +1 validated p.R640C 0.001 92 0% 36 16.7% 1 100% benign(0.03) tolerated(0.06) neutral(0.324) NULL RP1 6101 genome.wustl.edu 37 8 55541829 55541829 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_006269.1 +1 reviewed p.T1796M 0.000 186 0% 172 18% 0 - benign(0.167) deleterious(0) neutral(0.460) NULL CLVS1 157807 genome.wustl.edu 37 8 62212627 62212627 + Nonsense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_173519.2 +1 validated p.R81* 0.997 199 0% 199 38.7% 0 - - - - HMMPfam_CRAL_TRIO_N,superfamily_CRAL/TRIO N-terminal domain TRPA1 8989 genome.wustl.edu 37 8 72967782 72967782 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_007332.2 -1 reviewed p.R473K 0.999 310 0% 207 50.7% 0 - benign(0.393) tolerated(1) neutral(0.126) HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,PatternScan_EF_HAND_1 VPS13B 157680 genome.wustl.edu 37 8 100148970 100148970 + Silent SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_017890.3 +1 reviewed p.T547 1.000 543 0% 403 40% 4 75% - - - NULL CSMD3 114788 genome.wustl.edu 37 8 113363470 113363470 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_198123.1 -1 validated p.H2087Y 1.000 313 0% 196 11.2% 0 - possibly_damaging(0.903) tolerated(0.18) neutral(0.414) HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain ZFAT 57623 genome.wustl.edu 37 8 135533239 135533239 + Missense_Mutation SNP A A C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_020863.3 -1 reviewed p.L1041V 0.906 264 0% 175 19.4% 8 37.5% possibly_damaging(0.88) tolerated(0.06) deleterious(0.665) HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers CYP11B1 1584 genome.wustl.edu 37 8 143957674 143957674 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_000497.3 -1 reviewed p.A313T 0.986 206 0% 194 16.5% 0 - benign(0.336) deleterious(0.02) deleterious(0.489) HMMPfam_p450,superfamily_Cytochrome_P450 EEF1D 1936 genome.wustl.edu 37 8 144671300 144671300 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001130053.1 -1 reviewed p.S318G 0.997 6 0.000 13 0.308 41 43.9% benign(0.002) tolerated(0.06) neutral(0.323) NULL GPAA1 8733 genome.wustl.edu 37 8 145139945 145139945 + Splice_Site SNP C C T rs187027021 by1000genomes TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_003801.3 +1 reviewed e9-1 0.309 127 0% 87 43.7% 7 71.4% - - - - RANBP6 26953 genome.wustl.edu 37 9 6013878 6013878 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_012416.2 -1 validated p.G577E 1.000 356 0% 256 32.4% 8 25% probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_ARM-type_fold KLHL9 55958 genome.wustl.edu 37 9 21333570 21333570 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_018847.2 -1 validated p.A430V 1.000 384 0% 287 35.5% 7 57.1% possibly_damaging(0.731) deleterious(0.04) deleterious(0.616) HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain KLHL9 55958 genome.wustl.edu 37 9 21333734 21333734 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_018847.2 -1 validated p.R375 0.994 185 0% 160 35% 6 16.6% - - - HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain ACO1 48 genome.wustl.edu 37 9 32450068 32450068 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_002197.2 +1 reviewed p.G877R 1.000 194 0% 193 33.7% 11 36.3% probably_damaging(0.992) deleterious(0.01) deleterious(0.853) superfamily_Aconitase ANKRD18B 441459 genome.wustl.edu 37 9 33548515 33548515 + Missense_Mutation SNP A A T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c XM_001718334.2 +1 model p.S643C 0.171 354 0% 287 38% 0 - probably_damaging(0.989) tolerated(0.13) deleterious(0.692) NULL ZCCHC7 84186 genome.wustl.edu 37 9 37327831 37327831 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_032226.2 +1 validated p.T329 0.992 343 0.6% 277 45.1% 20 55% - - - superfamily_Retrovirus zinc finger-like domains ZNF658 26149 genome.wustl.edu 37 9 40784527 40784527 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_033160.5 -1 validated p.T31M 0.005 192 0% 213 35.7% 0 - probably_damaging(0.995) deleterious(0.02) deleterious(0.841) HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352) CEP78 84131 genome.wustl.edu 37 9 80855050 80855050 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001098802.1 +1 validated p.L122P 0.937 278 0.4% 213 20.2% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_SSF52047 LOC100129901 100129901 genome.wustl.edu 37 9 88396261 88396261 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c XM_001716099.2 +1 model p.R42Q 0.004 231 0% 157 40.8% 1 100% - - - NULL ROR2 4920 genome.wustl.edu 37 9 94487076 94487076 + Missense_Mutation SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_004560.2 -1 reviewed p.M567T 1.000 34 0% 35 42.9% 1 100% probably_damaging(0.969) tolerated(0.59) neutral(0.416) HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like BARX1 56033 genome.wustl.edu 37 9 96714572 96714572 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_021570.3 -1 reviewed p.P213 0.963 98 0% 67 34.3% 60 53.3% - - - NULL FAM22G 441457 genome.wustl.edu 37 9 99700951 99700951 + Missense_Mutation SNP G G T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000372322 +1 known p.Q582H 0.001 199 0% 194 13.4% 0 - probably_damaging(1) tolerated(0.07) deleterious(0.819) NULL CORO2A 7464 genome.wustl.edu 37 9 100895356 100895356 + Silent SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_003389.3 -1 reviewed p.I204 0.998 306 0% 306 42.8% 1 100% - - - HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40 C9orf84 158401 genome.wustl.edu 37 9 114456526 114456526 + Frame_Shift_Del DEL T T - novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_173521.3 -1 validated p.V1037fs 0.973 - - - - - - - - - NULL ZNF618 114991 genome.wustl.edu 37 9 116811195 116811195 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_133374.2 +1 validated p.T445I 1.000 38 0% 28 25% 5 0% probably_damaging(1) deleterious(0) deleterious(0.945) NULL DBC1 1620 genome.wustl.edu 37 9 121929375 121929375 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_014618.2 -1 validated p.A758V 1.000 441 0% 368 14.9% 0 - benign(0) tolerated(0.13) neutral(0.253) NULL GOLGA1 2800 genome.wustl.edu 37 9 127661675 127661675 + Missense_Mutation SNP A A T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_002077.3 -1 reviewed p.L415Q 0.969 115 0% 132 18.2% 3 0% - - - NULL LOC100289277 100289277 genome.wustl.edu 37 9 135139995 135139995 + Missense_Mutation SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c XM_002344239.1 +1 model p.K97E 0.000 172 0% 173 24.3% 12 50% - - - NULL TSC1 7248 genome.wustl.edu 37 9 135772056 135772056 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_000368.4 -1 reviewed p.P1021S 0.987 37 0% 28 35.7% 4 75% benign(0.002) tolerated(0.55) neutral(0.007) NULL ITIH5 80760 genome.wustl.edu 37 10 7607998 7607998 + Missense_Mutation SNP A A C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_030569.5 -1 validated p.L841R 0.997 136 0% 124 50% 3 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_ITI_HC_C PHYH 5264 genome.wustl.edu 37 10 13330465 13330465 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_006214.3 -1 reviewed p.C191 0.804 77 0% 74 31.1% 27 29.6% - - - HMMPfam_PhyH ARMC4 55130 genome.wustl.edu 37 10 28272820 28272820 + Silent SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_018076.2 -1 validated p.G257 0.004 110 0% 81 17.3% 0 - - - - NULL PBLD 64081 genome.wustl.edu 37 10 70051885 70051885 + Splice_Site SNP C C G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_022129.3 -1 validated e4+1 1.000 200 0% 117 35.9% 0 - - - - - KIAA0913 23053 genome.wustl.edu 37 10 75558964 75558964 + Missense_Mutation SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_015037.2 +1 validated p.M1461V 0.797 108 0% 86 43% 13 23% benign(0) tolerated(0.53) neutral(0.007) NULL KIF11 3832 genome.wustl.edu 37 10 94392246 94392246 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_004523.3 +1 reviewed p.L500F 1.000 99 0% 63 17.5% 0 - probably_damaging(0.997) deleterious(0.01) deleterious(0.872) NULL SEC31B 25956 genome.wustl.edu 37 10 102269202 102269202 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_015490.3 -1 reviewed p.G90 0.979 115 0.9% 132 33.3% 2 0% - - - superfamily_WD40 repeat-like BTRC 8945 genome.wustl.edu 37 10 103294576 103294576 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_033637.2 +1 reviewed p.R419Q 1.000 332 0% 284 13.4% 3 33.3% benign(0.234) tolerated(0.4) neutral(0.040) HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40 INPP5F 22876 genome.wustl.edu 37 10 121510592 121510592 + Silent SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_014937.2 +1 reviewed p.T34 0.942 764 0% 470 37.9% 4 50% - - - NULL FGFR2 2263 genome.wustl.edu 37 10 123279677 123279677 + Missense_Mutation SNP G G C rs79184941 byCluster TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_022970.3 -1 reviewed p.S252W 1.000 89 0% 112 48.2% 1 100% probably_damaging(0.963) tolerated(0.07) deleterious(0.725) NULL CPXM2 119587 genome.wustl.edu 37 10 125521574 125521574 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_198148.2 -1 validated p.R531W 0.971 72 0% 58 39.7% 1 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Peptidase_M14,HMMSmart_SM00631,superfamily_Zn-dependent exopeptidases DOCK1 1793 genome.wustl.edu 37 10 128798496 128798496 + Missense_Mutation SNP G G A rs140885933 by1000genomes TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000398025 +1 known p.V304M 0.998 230 0% 160 26.3% 4 25% probably_damaging(0.991) deleterious(0) deleterious(0.889) NULL CLRN3 119467 genome.wustl.edu 37 10 129676685 129676685 + Splice_Site SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_152311.3 -1 validated e3-1 0.985 145 0% 116 38.8% 2 100% - - - - MUC5B 727897 genome.wustl.edu 37 11 1271835 1271835 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_002458.1 +1 validated p.T4578 0.000 574 0.5% 735 36.7% 1 0% benign(0.014) tolerated(0.29) neutral(0.030) NULL PGAP2 27315 genome.wustl.edu 37 11 3846853 3846855 + RNA DEL CTC CTC - rs3217617 byCluster;by1000genomes TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 CTC CTC Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NR_027014.1 +1 validated NULL 0.231:0.226:0.001 - - - - - - - - - - CNGA4 1262 genome.wustl.edu 37 11 6261781 6261781 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001037329.2 +1 validated p.L253 1.000 56 0% 48 41.7% 0 - - - - HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels NLRP14 338323 genome.wustl.edu 37 11 7064373 7064373 + Nonsense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_176822.3 +1 reviewed p.C372* 0.999 170 0% 164 37.2% 0 - - - - NULL LOC100288260 100288260 genome.wustl.edu 37 11 9090905 9090905 + Nonsense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c XM_002343071.1 +1 model p.W342* 0.001 42 0% 43 25.6% 1 100% - - - NULL IPO7 10527 genome.wustl.edu 37 11 9406315 9406315 + Missense_Mutation SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_006391.2 +1 reviewed p.D2G 1.000 34 0% 30 53.3% 4 25% unknown(0) deleterious(0) - superfamily_ARM-type_fold CTR9 9646 genome.wustl.edu 37 11 10789525 10789525 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_014633.3 +1 provisional p.R620Q 1.000 311 0% 231 42.4% 0 - possibly_damaging(0.477) deleterious(0.04) deleterious(0.506) superfamily_SSF48452 SPTY2D1 144108 genome.wustl.edu 37 11 18636576 18636576 + Silent SNP G G T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_194285.2 -1 validated p.S415 0.928 22 0% 22 45.5% 0 - - - - NULL E2F8 79733 genome.wustl.edu 37 11 19251266 19251266 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_024680.2 -1 validated p.T543M 0.072 223 0% 233 37.3% 0 - benign(0.18) tolerated(0.1) neutral(0.303) NULL ANO5 203859 genome.wustl.edu 37 11 22261223 22261223 + Missense_Mutation SNP T T A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_213599.2 +1 reviewed p.L291M 0.994 253 0% 181 16.6% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) NULL CCDC34 91057 genome.wustl.edu 37 11 27384546 27384546 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_030771.1 -1 validated p.L66 0.938 163 0% 155 23.2% 23 26% - - - NULL ACCS 84680 genome.wustl.edu 37 11 44098876 44098876 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001127219.1 +1 validated p.V202M 0.768 121 0% 105 44.8% 9 55.5% benign(0.029) tolerated(0.15) neutral(0.242) HMMPfam_Aminotran_1_2,superfamily_PyrdxlP-dep_Trfase_major MADD 8567 genome.wustl.edu 37 11 47303242 47303242 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_003682.3 +1 reviewed p.P469 0.945 258 0% 199 13.1% 4 50% - - - NULL OR4C45 403257 genome.wustl.edu 37 11 48367508 48367508 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000360720 -1 known p.A104V 0.010 71 0% 68 23.5% 0 - - - - HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like OR5F1 338674 genome.wustl.edu 37 11 55761459 55761459 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_003697.1 -1 provisional p.L215F 0.001 75 0% 62 32.3% 0 - probably_damaging(0.996) tolerated(0.14) deleterious(0.711) HMMPfam_7tm_1,superfamily_SSF81321 P2RX3 5024 genome.wustl.edu 37 11 57106068 57106068 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_002559.2 +1 reviewed p.S15L 0.999 398 0.5% 317 15.5% 0 - probably_damaging(0.998) tolerated(0.33) deleterious(0.498) HMMPfam_P2X_receptor CTNND1 1500 genome.wustl.edu 37 11 57575861 57575861 + Splice_Site SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001085458.1 +1 validated e12-1 1.000 197 0% 177 37.9% 0 - - - - - OTUB1 55611 genome.wustl.edu 37 11 63764926 63764926 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_017670.2 +1 reviewed p.G242S 1.000 70 0% 57 15.8% 295 23% benign(0.001) tolerated(0.81) neutral(0.001) HMMPfam_Peptidase_C65,superfamily_Cysteine proteinases NDUFV1 4723 genome.wustl.edu 37 11 67378879 67378879 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_007103.3 +1 reviewed p.V307I 1.000 63 0% 74 40.5% 208 39.9% benign(0.065) tolerated(0.36) neutral(0.025) HMMPfam_SLBB ARAP1 116985 genome.wustl.edu 37 11 72437799 72437799 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001040118.2 -1 reviewed p.P125 0.039 13 0% 10 50% 1 100% - - - NULL ARHGEF17 9828 genome.wustl.edu 37 11 73021494 73021494 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_014786.3 +1 validated p.R604H 0.970 67 0% 85 23.5% 3 0% probably_damaging(0.974) deleterious(0) deleterious(0.861) NULL MTNR1B 4544 genome.wustl.edu 37 11 92714818 92714818 + Nonsense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_005959.3 +1 reviewed p.C143* 0.995 173 0% 229 13.5% 0 - - - - HMMPfam_7tm_1,superfamily_SSF81321 DCUN1D5 84259 genome.wustl.edu 37 11 102953482 102953482 + Silent SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_032299.3 -1 validated p.S112 1.000 231 0% 117 47.9% 7 85.7% - - - NULL DDI1 414301 genome.wustl.edu 37 11 103908727 103908727 + Nonsense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001001711.2 +1 validated p.R393* 0.000 160 0% 96 36.5% 0 - - - - NULL KBTBD3 143879 genome.wustl.edu 37 11 105924443 105924443 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_152433.3 -1 validated p.P325S 0.959 162 0% 141 38.3% 0 - benign(0) tolerated(0.11) neutral(0.272) superfamily_Galactose oxidase central domain TMPRSS13 84000 genome.wustl.edu 37 11 117784550 117784550 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001077263.1 -1 validated p.S251G 0.999 71 0% 99 20.2% 0 - probably_damaging(0.971) tolerated(0.05) deleterious(0.758) HMMSmart_SM00202,superfamily_SRCR-like ATP5L 10632 genome.wustl.edu 37 11 118277730 118277730 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_006476.4 +1 reviewed p.A44V 1.000 391 0.3% 342 16.1% 1224 14.4% benign(0.007) deleterious(0.02) neutral(0.383) HMMPfam_ATP-synt_G ARHGEF12 23365 genome.wustl.edu 37 11 120348879 120348879 + Silent SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_015313.1 +1 reviewed p.L1183 0.987 206 0% 169 35.5% 6 33.3% - - - NULL HSPA8 3312 genome.wustl.edu 37 11 122931330 122931330 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_006597.3 -1 reviewed p.K128E 1.000 312 0% 232 37.5% 62 41.9% possibly_damaging(0.916) deleterious(0.01) deleterious(0.772) HMMPfam_HSP70,superfamily_Actin-like ATPase domain OPCML 4978 genome.wustl.edu 37 11 132399019 132399019 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_002545.3 -1 reviewed p.T154 0.988 157 0% 129 20.2% 0 - - - - HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin NCAPD3 23310 genome.wustl.edu 37 11 134064580 134064580 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_015261.2 -1 validated p.V557I 1.000 237 0.4% 153 30.1% 0 - probably_damaging(1) deleterious(0.03) deleterious(0.865) HMMPfam_HEAT,superfamily_ARM-type_fold RAD52 5893 genome.wustl.edu 37 12 1039020 1039020 + Frame_Shift_Del DEL C C - novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_134424.2 -1 reviewed p.V105fs 1.000 - - - - - - - - - HMMPfam_Rad52_Rad22,superfamily_dsRNA-binding domain-like CACNA1C 775 genome.wustl.edu 37 12 2224659 2224659 + Missense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_199460.2 +1 reviewed p.L107M 1.000 27 0% 26 38.5% 0 - possibly_damaging(0.481) deleterious(0.03) deleterious(0.524) NULL EFCAB4B 84766 genome.wustl.edu 37 12 3768748 3768748 + Missense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001144958.1 -1 validated p.K248N 1.000 420 0% 334 21.6% 1 0% probably_damaging(0.974) deleterious(0.02) deleterious(0.799) NULL LEPREL2 10536 genome.wustl.edu 37 12 6938023 6938024 + Frame_Shift_Ins INS - - G rs112583020 byCluster;by1000genomes TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000290510 +1 known p.R141fs 1.000:1.000 - - - - - - - - - NULL CDCA3 83461 genome.wustl.edu 37 12 6958831 6958831 + Missense_Mutation SNP G G C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_031299.4 -1 validated p.Q148E 0.262 98 0% 66 43.9% 30 40% possibly_damaging(0.933) deleterious(0.04) deleterious(0.728) NULL A2ML1 144568 genome.wustl.edu 37 12 8988222 8988222 + Silent SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_144670.3 +1 validated p.A201 0.947 343 0% 302 16.9% 0 - - - - HMMPfam_A2M_N GRIN2B 2904 genome.wustl.edu 37 12 13722946 13722946 + Missense_Mutation SNP A A C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_000834.3 -1 reviewed p.L726R 1.000 103 0% 49 46.9% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Lig_chan,HMMSmart_PBPe,superfamily_SSF53850 BICD1 636 genome.wustl.edu 37 12 32480565 32480565 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001714.2 +1 reviewed p.D392 0.236 144 0% 126 38.1% 9 22.2% - - - HMMPfam_BicD NCKAP5L 57701 genome.wustl.edu 37 12 50189409 50189409 + Missense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001037806.3 -1 validated p.G745V 0.001 60 0% 39 23.1% 4 25% benign(0.032) deleterious(0.03) neutral(0.366) NULL LARP4 113251 genome.wustl.edu 37 12 50869557 50869557 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_199188.2 +1 validated p.Q701 1.000 140 0% 119 12.6% 7 14.2% - - - NULL STAT6 6778 genome.wustl.edu 37 12 57501513 57501513 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_003153.4 -1 reviewed p.G44S 0.966 86 0% 66 42.4% 18 50% probably_damaging(0.995) tolerated(0.6) neutral(0.462) HMMPfam_STAT_int,superfamily_Transcription factor STAT-4 N-domain HELB 92797 genome.wustl.edu 37 12 66712564 66712564 + Missense_Mutation SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_033647.2 +1 reviewed p.H716R 0.043 322 0% 180 41.7% 0 - benign(0.02) tolerated(0.36) neutral(0.021) superfamily_P-loop containing nucleoside triphosphate hydrolases DYRK2 8445 genome.wustl.edu 37 12 68051906 68051906 + Missense_Mutation SNP A A T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_006482.2 +1 reviewed p.S407C 1.000 136 0% 132 16.7% 10 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase PPFIA2 8499 genome.wustl.edu 37 12 81751977 81751977 + Missense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_003625.2 -1 reviewed p.A553S 0.794 179 0% 130 39.2% 0 - benign(0) tolerated(0.43) neutral(0.013) NULL PPFIA2 8499 genome.wustl.edu 37 12 81768423 81768423 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_003625.2 -1 reviewed p.A419V 1.000 277 0% 211 42.2% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) NULL TMCC3 57458 genome.wustl.edu 37 12 94975997 94975999 + In_Frame_Del DEL CTT CTT - novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 CTT CTT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_020698.2 -1 validated p.K132in_frame_del 0.998:1.000:1.000 - - - - - - - - - HMMPfam_Tmemb_cc2 MYBPC1 4604 genome.wustl.edu 37 12 102071162 102071162 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_002465.2 +1 validated p.I1033 0.617 209 0% 143 39.2% 0 - - - - superfamily_Fibronectin type III NUP37 79023 genome.wustl.edu 37 12 102471111 102471111 + Silent SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_024057.2 -1 provisional p.I237 0.994 232 0% 203 48.8% 27 59.2% - - - superfamily_WD40 repeat-like POLR3B 55703 genome.wustl.edu 37 12 106895204 106895204 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_018082.5 +1 validated p.V1030I 1.000 133 0.8% 91 13.2% 9 0% benign(0.004) tolerated(0.69) neutral(0.002) HMMPfam_RNA_pol_Rpb2_6,superfamily_beta and beta-prime subunits of DNA dependent RNA-polymerase PPTC7 160760 genome.wustl.edu 37 12 110975949 110975949 + Missense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_139283.1 -1 provisional p.G286C 1.000 174 0.6% 156 21.2% 1 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_PP2C_SIG,HMMSmart_PP2Cc,superfamily_PP2C-related,HMMPfam_SpoIIE LHX5 64211 genome.wustl.edu 37 12 113901242 113901242 + Missense_Mutation SNP G G T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_022363.2 -1 reviewed p.T321K 1.000 14 0% 15 60% 0 - possibly_damaging(0.947) tolerated(0.06) deleterious(0.713) NULL RNF34 80196 genome.wustl.edu 37 12 121858458 121858458 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_194271.1 +1 reviewed p.V270M 1.000 204 0% 172 24.4% 6 50% probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL ORAI1 84876 genome.wustl.edu 37 12 122079446 122079446 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_032790.3 +1 reviewed p.R268Q 1.000 60 1.7% 72 15.3% 14 14.2% probably_damaging(0.997) tolerated(0.12) deleterious(0.727) HMMPfam_DUF1650 SETD1B 23067 genome.wustl.edu 37 12 122242663 122242663 + Missense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_015048.1 +1 validated p.P7H 1.000 71 0% 58 13.8% 2 0% unknown(0) - - NULL B3GNT4 79369 genome.wustl.edu 37 12 122691586 122691587 + Frame_Shift_Ins INS - - A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_030765.2 +1 reviewed p.P264fs 1.000:0.000 - - - - - - - - - HMMPfam_Galactosyl_T WASF3 10810 genome.wustl.edu 37 13 27246014 27246014 + Missense_Mutation SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_006646.5 +1 reviewed p.D143G 1.000 194 0% 135 39.3% 0 - probably_damaging(0.999) deleterious(0.01) deleterious(0.896) NULL KIAA0564 23078 genome.wustl.edu 37 13 42164826 42164826 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_015058.1 -1 validated p.L1688 0.999 349 0% 287 17.1% 4 0% - - - NULL FAM124A 220108 genome.wustl.edu 37 13 51805511 51805511 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_145019.2 +1 predicted p.T32 1.000 356 0% 266 35.3% 2 100% - - - NULL OLFM4 10562 genome.wustl.edu 37 13 53617301 53617301 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_006418.3 +1 reviewed p.A211V 0.826 238 0% 149 40.3% 2 50% benign(0.016) tolerated(0.56) neutral(0.007) NULL LMO7 4008 genome.wustl.edu 37 13 76382253 76382253 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_015842.2 +1 reviewed p.C379R 1.000 131 0% 137 38% 0 - probably_damaging(0.999) deleterious(0.01) deleterious(0.896) NULL GPR18 2841 genome.wustl.edu 37 13 99907488 99907488 + Missense_Mutation SNP A A T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001098200.1 -1 validated p.N213K 0.991 225 0% 214 18.7% 0 - benign(0.048) deleterious(0.01) neutral(0.409) HMMPfam_7tm_1,superfamily_SSF81321 NALCN 259232 genome.wustl.edu 37 13 101795468 101795468 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_052867.2 -1 validated p.R694H 0.998 655 0.2% 532 37.6% 0 - probably_damaging(0.991) tolerated(0.07) deleterious(0.763) NULL LOC643677 643677 genome.wustl.edu 37 13 103392159 103392159 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c XM_002344085.1 -1 model p.I3559V 0.001 475 0% 333 39.3% 0 - - - - NULL COL4A2 1284 genome.wustl.edu 37 13 111141854 111141854 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001846.2 +1 reviewed p.F1090 0.000 215 0% 257 39.3% 25 40% - - - HMMPfam_Collagen ARHGEF7 8874 genome.wustl.edu 37 13 111870209 111870209 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001113511.1 +1 reviewed p.R239C 1.000 79 0% 85 35.3% 0 - probably_damaging(0.996) deleterious(0) deleterious(0.906) HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain MCF2L 23263 genome.wustl.edu 37 13 113719271 113719271 + Missense_Mutation SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001112732.1 +1 validated p.M267V 0.996 81 1.2% 98 18.4% 10 20% benign(0.001) tolerated(0.37) neutral(0.019) NULL ABHD4 63874 genome.wustl.edu 37 14 23075425 23075425 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000428304 +1 known p.T273M 0.636 229 0% 177 13% 7 0% - - - NULL LOC100288791 100288791 genome.wustl.edu 37 14 23311679 23311679 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c XM_002343265.1 -1 model p.R213C 0.992 62 0% 83 38.6% 5 40% - - - NULL RBM23 55147 genome.wustl.edu 37 14 23374595 23374595 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001077351.1 -1 reviewed p.A175T 1.000 117 0% 117 39.3% 5 40% benign(0.013) tolerated(0.17) neutral(0.059) HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD JPH4 84502 genome.wustl.edu 37 14 24046490 24046490 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_032452.2 -1 reviewed p.G58E 1.000 12 0.000 8 0.500 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_MORN,superfamily_SSF82185 KIAA0391 9692 genome.wustl.edu 37 14 35596684 35596684 + Splice_Site SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_014672.2 +1 provisional e3-1 1.000 116 0% 78 37.2% 1 100% - - - - SSTR1 6751 genome.wustl.edu 37 14 38678630 38678630 + Missense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000455187 +1 known p.L108I 1.000 44 0% 35 11.4% 0 - - - - NULL PYGL 5836 genome.wustl.edu 37 14 51410917 51410917 + Missense_Mutation SNP T T A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_002863.4 -1 reviewed p.I69F 1.000 53 0% 61 13.1% 9 0% probably_damaging(0.986) deleterious(0.02) deleterious(0.818) superfamily_SSF53756 TMX1 81542 genome.wustl.edu 37 14 51707068 51707068 + Missense_Mutation SNP G G T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_030755.4 +1 validated p.G20C 0.004 102 0% 116 40.5% 5 40% unknown(0) tolerated(0.06) - NULL BMP4 652 genome.wustl.edu 37 14 54417120 54417120 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001202.3 -1 reviewed p.R286Q 0.995 47 0% 45 13.3% 23 30.4% benign(0.003) tolerated(0.11) neutral(0.272) NULL SLC35F4 341880 genome.wustl.edu 37 14 58038642 58038642 + Silent SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001080455.1 -1 provisional p.V337 0.980 195 0% 135 46.7% 0 - - - - NULL DPF3 8110 genome.wustl.edu 37 14 73181177 73181177 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_012074.3 -1 provisional p.H186 0.981 96 0% 77 44.2% 0 - - - - NULL C14orf102 55051 genome.wustl.edu 37 14 90767598 90767598 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_017970.2 -1 validated p.L510 0.995 166 0.6% 141 14.2% 1 100% - - - HMMPfam_DUF1740,superfamily_Prenyl_trans DICER1 23405 genome.wustl.edu 37 14 95557604 95557604 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_030621.3 -1 reviewed p.M1821I 1.000 312 0% 269 41.3% 13 7.6% possibly_damaging(0.552) deleterious(0.01) deleterious(0.594) HMMPfam_Ribonuclease_3,HMMSmart_RIBOc,superfamily_RNase_III DICER1 23405 genome.wustl.edu 37 14 95560464 95560464 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_030621.3 -1 reviewed p.D1709N 1.000 104 0% 96 39.6% 8 50% probably_damaging(0.994) deleterious(0) deleterious(0.897) HMMPfam_Ribonuclease_3,HMMSmart_RIBOc,PatternScan_RNASE_3_1,superfamily_RNase_III WDR25 79446 genome.wustl.edu 37 14 100934379 100934379 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_024515.4 +1 validated p.G282R 0.959 112 0% 88 13.6% 4 25% possibly_damaging(0.676) tolerated(0.62) neutral(0.244) HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40 DYNC1H1 1778 genome.wustl.edu 37 14 102452738 102452738 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001376.4 +1 reviewed p.R726W 0.968 108 0% 117 17.1% 0 - probably_damaging(0.999) deleterious(0.01) deleterious(0.896) HMMPfam_DHC_N1 MOK 5891 genome.wustl.edu 37 14 102732208 102732208 + Missense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_014226.1 -1 provisional p.R55M 1.000 479 0% 388 21.4% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase AKT1 207 genome.wustl.edu 37 14 105242084 105242084 + Missense_Mutation SNP C C G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001014431.1 -1 reviewed p.E114Q 1.000 149 0% 164 13.4% 23 13% benign(0.008) tolerated(0.43) neutral(0.013) superfamily_PH domain-like AHNAK2 113146 genome.wustl.edu 37 14 105407769 105407769 + Silent SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_138420.2 -1 validated p.H4673 0.001 60 0% 51 51% 1 0% - - - NULL AHNAK2 113146 genome.wustl.edu 37 14 105414444 105414444 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_138420.2 -1 validated p.S2448 0.000 259 0% 236 19.1% 0 - - - - NULL AHNAK2 113146 genome.wustl.edu 37 14 105418659 105418659 + Silent SNP G G T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_138420.2 -1 validated p.T1043 0.000 182 0% 243 21.4% 1 100% - - - NULL MTA1 9112 genome.wustl.edu 37 14 105931019 105931019 + Missense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_004689.3 +1 reviewed p.H451Q 0.997 18 0% 27 48.1% 99 40.4% benign(0.039) tolerated(0.16) neutral(0.061) superfamily_Glucocorticoid receptor-like (DNA-binding domain) IGHM 3507 genome.wustl.edu 37 14 106321875 106321875 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000496208 -1 known p.R119H 0.019 19 0% 38 42.1% 3 0% probably_damaging(1) deleterious(0.04) deleterious(0.849) HMMPfam_C1-set,superfamily_Immunoglobulin ENSG00000229584 0 genome.wustl.edu 37 15 21369460 21369460 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000450252 +1 known p.V39M 1.000 189 0% 178 41.6% 0 - - - - HMMPfam_DUF663 HERC2 8924 genome.wustl.edu 37 15 28424159 28424159 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_004667.4 -1 reviewed p.V3013M 1.000 68 0% 68 13.2% 1 0% probably_damaging(0.981) deleterious(0.01) deleterious(0.831) HMMPfam_RCC1,HMMSmart_SM00706,superfamily_RCC1/BLIP-II ENSG00000221138 0 genome.wustl.edu 37 15 33256249 33256249 + RNA SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000408211 -1 novel NULL 0.013 220 0.5% 176 29% 0 - - - - - ACTC1 70 genome.wustl.edu 37 15 35086985 35086985 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_005159.4 -1 reviewed p.A9T 1.000 40 0% 37 40.5% 0 - benign(0.264) - - HMMPfam_Actin,HMMSmart_SM00268,superfamily_Actin-like ATPase domain FAM82A2 55177 genome.wustl.edu 37 15 41036319 41036319 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_018145.1 -1 provisional p.R279H 1.000 103 0% 107 19.6% 27 25.9% probably_damaging(1) deleterious(0) deleterious(0.945) NULL OIP5 11339 genome.wustl.edu 37 15 41624506 41624506 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_007280.1 -1 provisional p.A85V 0.923 26 0% 27 40.7% 4 50% probably_damaging(0.998) deleterious(0.03) deleterious(0.839) NULL PLA2G4D 283748 genome.wustl.edu 37 15 42362241 42362241 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_178034.3 -1 validated p.R699Q 0.005 39 0% 42 45.2% 0 - benign(0.072) tolerated(0.21) neutral(0.049) HMMSmart_SM00022,superfamily_FabD/lysophospholipase-like CDAN1 146059 genome.wustl.edu 37 15 43022811 43022811 + Missense_Mutation SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_138477.2 -1 reviewed p.L720P 1.000 73 0% 72 34.7% 16 37.5% probably_damaging(1) deleterious(0) deleterious(0.945) NULL TUBGCP4 27229 genome.wustl.edu 37 15 43690301 43690301 + Missense_Mutation SNP G G C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_014444.2 +1 provisional p.G448R 1.000 239 0% 163 18.4% 2 0% probably_damaging(0.998) deleterious(0) deleterious(0.919) HMMPfam_Spc97_Spc98 DUOX1 53905 genome.wustl.edu 37 15 45428784 45428784 + Missense_Mutation SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_017434.3 +1 reviewed p.Q328R 1.000 174 0% 154 42.2% 2 0% benign(0.01) tolerated(1) neutral(0.001) HMMPfam_An_peroxidase,superfamily_Heme-dependent peroxidases AP4E1 23431 genome.wustl.edu 37 15 51285771 51285771 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_007347.3 +1 validated p.L765 1.000 293 0% 229 22.7% 0 - - - - NULL ALDH1A2 8854 genome.wustl.edu 37 15 58357778 58357778 + Missense_Mutation SNP T T A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_003888.2 -1 reviewed p.H24L 1.000 48 0% 48 10.4% 0 - benign(0.009) tolerated(0.41) neutral(0.015) superfamily_ALDH-like HERC1 8925 genome.wustl.edu 37 15 63955325 63955325 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_003922.3 -1 reviewed p.A2920V 1.000 288 0% 272 20.2% 0 - possibly_damaging(0.643) - - NULL AP3B2 8120 genome.wustl.edu 37 15 83346489 83346489 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_004644.3 -1 validated p.T438A 1.000 78 0% 80 15% 1 0% benign(0.012) tolerated(0.42) neutral(0.015) HMMPfam_Adaptin_N,superfamily_ARM-type_fold WHAMM 123720 genome.wustl.edu 37 15 83499641 83499641 + Silent SNP T T A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001080435.1 +1 provisional p.P644 0.000 47 0% 31 25.8% 3 66.6% - - - NULL BTBD1 53339 genome.wustl.edu 37 15 83698937 83698937 + Nonsense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_025238.3 -1 reviewed p.Q336* 1.000 365 0% 296 38.2% 4 50% - - - HMMPfam_PHR NTRK3 4916 genome.wustl.edu 37 15 88576150 88576150 + Missense_Mutation SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001012338.1 -1 reviewed p.I508T 1.000 56 0% 74 41.9% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL ZNF710 374655 genome.wustl.edu 37 15 90610437 90610437 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_198526.2 +1 validated p.A23V 1.000 29 0% 48 25% 4 25% possibly_damaging(0.515) deleterious(0) deleterious(0.618) NULL LRRK1 79705 genome.wustl.edu 37 15 101606112 101606112 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_024652.3 +1 validated p.L1824 1.000 104 0% 113 47.8% 2 100% - - - NULL MPG 4350 genome.wustl.edu 37 16 129665 129665 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_002434.2 +1 validated p.P94L 0.998 84 0% 83 44.6% 57 43.8% probably_damaging(0.999) deleterious(0.01) deleterious(0.896) HMMPfam_Pur_DNA_glyco,superfamily_FMT C-terminal domain-like FBXL16 146330 genome.wustl.edu 37 16 745727 745727 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_153350.3 -1 validated p.A277V 1.000 12 0% 29 24.1% 0 - probably_damaging(1) deleterious(0.04) deleterious(0.849) superfamily_SSF52047 RPUSD1 113000 genome.wustl.edu 37 16 836267 836267 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_058192.2 -1 validated p.L208 1.000 45 0% 38 55.3% 32 53.1% - - - superfamily_PsdUridine_synth_cat_dom IFT140 9742 genome.wustl.edu 37 16 1608121 1608121 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_014714.3 -1 validated p.D738 0.000 238 0% 210 33.8% 3 66.6% - - - NULL IFT140 9742 genome.wustl.edu 37 16 1657237 1657237 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_014714.3 -1 validated p.A11T 0.999 289 0% 233 44.2% 3 66.6% probably_damaging(0.998) tolerated(0.11) deleterious(0.746) NULL CCDC64B 146439 genome.wustl.edu 37 16 3079571 3079571 + Missense_Mutation SNP C C G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001103175.1 -1 validated p.G311A 0.000 24 0% 33 33.3% 44 40.9% benign(0) tolerated(0.76) neutral(0.001) NULL NUDT16L1 84309 genome.wustl.edu 37 16 4744991 4744991 + Silent SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_032349.2 +1 provisional p.T149 1.000 49 0% 32 21.9% 52 40.3% - - - NULL ANKS3 124401 genome.wustl.edu 37 16 4776997 4776997 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_133450.2 -1 provisional p.A118T 1.000 87 0% 93 14% 6 0% probably_damaging(0.999) deleterious(0.02) deleterious(0.873) HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK KIAA0430 9665 genome.wustl.edu 37 16 15718925 15718925 + Missense_Mutation SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_014647.3 -1 validated p.S687P 0.033 179 0% 177 37.9% 0 - benign(0) tolerated(1) - NULL GDE1 51573 genome.wustl.edu 37 16 19528400 19528400 + Nonsense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_016641.3 -1 validated p.R125* 0.038 383 0% 276 18.1% 7 0% - - - HMMPfam_GDPD,superfamily_PLC-like_Pdiesterase_TIM-brl IL21R 50615 genome.wustl.edu 37 16 27456580 27456580 + Missense_Mutation SNP G G T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_021798.2 +1 reviewed p.K256N 0.457 305 0% 267 41.6% 0 - benign(0.386) tolerated(0.19) neutral(0.173) NULL GTF3C1 2975 genome.wustl.edu 37 16 27514202 27514202 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001520.3 -1 validated p.R629C 1.000 427 0% 495 37.8% 2 0% probably_damaging(1) deleterious(0) deleterious(0.945) NULL SULT1A1 6817 genome.wustl.edu 37 16 28617472 28617472 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001055.2 -1 reviewed p.T227M 0.531 498 0% 438 17.6% 24 16.6% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Sulfotransfer_1,superfamily_P-loop containing nucleoside triphosphate hydrolases RABEP2 79874 genome.wustl.edu 37 16 28922223 28922223 + Missense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_024816.2 -1 validated p.V359L 0.998 39 0% 32 25% 51 35.2% possibly_damaging(0.751) deleterious(0.01) deleterious(0.681) HMMPfam_Rab5-bind RNF40 9810 genome.wustl.edu 37 16 30779624 30779624 + Silent SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_014771.2 +1 reviewed p.P584 0.000 40 0% 40 40% 17 23.5% - - - NULL FBXL19 54620 genome.wustl.edu 37 16 30939115 30939115 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001099784.2 +1 provisional p.G173D 0.975 18 0% 25 36% 13 69.2% probably_damaging(0.999) tolerated(0.62) deleterious(0.494) NULL ABCC11 85320 genome.wustl.edu 37 16 48226588 48226588 + Missense_Mutation SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_032583.3 -1 reviewed p.L850P 0.002 257 0% 282 33% 0 - benign(0) tolerated(0.17) neutral(0.059) HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain BRD7 29117 genome.wustl.edu 37 16 50354601 50354601 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_013263.3 -1 validated p.V529I 0.001 303 0.7% 237 19% 45 13.3% benign(0) tolerated(1) - NULL NDRG4 65009 genome.wustl.edu 37 16 58540891 58540891 + Missense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001130487.1 +1 reviewed p.L250M 1.000 159 0% 140 32.1% 12 33.3% probably_damaging(0.998) deleterious(0) deleterious(0.919) HMMPfam_Ndr,superfamily_SSF53474 CNOT1 23019 genome.wustl.edu 37 16 58620486 58620486 + Missense_Mutation SNP T T A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_016284.3 -1 validated p.Q200H 1.000 303 0% 202 36.6% 3 66.6% possibly_damaging(0.481) tolerated(0.12) neutral(0.420) NULL CDH11 1009 genome.wustl.edu 37 16 64984701 64984701 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001797.2 -1 reviewed p.I621 0.689 42 0% 44 40.9% 13 30.7% - - - NULL CDH11 1009 genome.wustl.edu 37 16 64984749 64984749 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001797.2 -1 reviewed p.N605 0.843 67 0% 64 39.1% 12 58.3% - - - NULL ENSG00000250685 0 genome.wustl.edu 37 16 65345433 65345433 + RNA SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000505989 -1 known NULL 0.000 280 0% 216 21.3% 0 - - - - - PKD1L3 342372 genome.wustl.edu 37 16 71976675 71976675 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000335106 -1 known p.R1369H 0.000 216 0% 178 42.1% 0 - - - - NULL PSMD7 5713 genome.wustl.edu 37 16 74338294 74338294 + Splice_Site SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_002811.3 +1 reviewed e6+2 1.000 255 0.4% 217 13.4% 8 87.5% - - - - PKD1L2 114780 genome.wustl.edu 37 16 81190627 81190627 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_052892.3 -1 reviewed p.T1321M 0.916 90 0% 117 29.9% 0 - probably_damaging(0.96) deleterious(0.01) deleterious(0.808) HMMPfam_GPS,HMMSmart_SM00303 MBTPS1 8720 genome.wustl.edu 37 16 84088084 84088084 + Missense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_003791.2 -1 reviewed p.Q1043H 0.998 77 0% 95 43.2% 145 35.1% benign(0.165) deleterious(0.02) neutral(0.398) NULL APRT 353 genome.wustl.edu 37 16 88876490 88876490 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_000485.2 -1 reviewed p.L130 0.994 77 0% 88 37.5% 564 37.7% - - - HMMPfam_Pribosyltran,PatternScan_PUR_PYR_PR_TRANSFER,superfamily_SSF53271 ANKRD11 29123 genome.wustl.edu 37 16 89349717 89349717 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_013275.4 -1 validated p.A1078V 0.000 414 0.2% 303 37.6% 3 33.3% benign(0.108) tolerated(0.06) neutral(0.331) superfamily_Ankyrin repeat SCARF1 8578 genome.wustl.edu 37 17 1538759 1538759 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_003693.2 -1 reviewed p.T596A 1.000 65 0% 74 21.6% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL PRPF8 10594 genome.wustl.edu 37 17 1555073 1555073 + Missense_Mutation SNP A A T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_006445.3 -1 reviewed p.Y2127N 0.999 73 0% 47 36.2% 73 34.2% possibly_damaging(0.744) deleterious(0) deleterious(0.718) HMMPfam_Mov34,HMMSmart_SM00232 P2RX1 5023 genome.wustl.edu 37 17 3806568 3806568 + Silent SNP G G T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_002558.2 -1 reviewed p.P225 0.120 143 0% 116 38.8% 0 - - - - HMMPfam_P2X_receptor GGT6 124975 genome.wustl.edu 37 17 4461937 4461937 + Missense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001122890.1 -1 validated p.E285D 0.015 21 0% 25 36% 2 0% possibly_damaging(0.621) tolerated(0.27) neutral(0.250) HMMPfam_G_glu_transpept SPAG7 9552 genome.wustl.edu 37 17 4863371 4863371 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_004890.2 -1 validated p.Y121 1.000 104 0% 69 29% 125 49.6% - - - NULL TEKT1 83659 genome.wustl.edu 37 17 6722627 6722627 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_053285.1 -1 reviewed p.L81F 1.000 338 0% 261 36% 0 - benign(0.091) tolerated(0.13) neutral(0.259) HMMPfam_Tektin ZBTB4 57659 genome.wustl.edu 37 17 7365389 7365389 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001128833.1 -1 validated p.A971V 1.000 89 0% 99 20.2% 4 25% probably_damaging(0.98) deleterious(0) deleterious(0.869) NULL ARHGEF15 22899 genome.wustl.edu 37 17 8216418 8216418 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_173728.2 +1 reviewed p.A260 0.079 76 0% 83 26.5% 0 - - - - NULL FAM211A 388341 genome.wustl.edu 37 17 16347111 16347113 + In_Frame_Del DEL AGA AGA - novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 AGA AGA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001113567.1 -1 validated p.F275in_frame_del 1.000:1.000:1.000 - - - - - - - - - superfamily_RNI-like LLGL1 3996 genome.wustl.edu 37 17 18137422 18137422 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_004140.3 +1 reviewed p.S216N 1.000 37 0% 34 41.2% 0 - possibly_damaging(0.916) tolerated(1) neutral(0.367) HMMSmart_SM00320,superfamily_WD40 repeat-like SPAG5 10615 genome.wustl.edu 37 17 26919653 26919656 + Frame_Shift_Del DEL CTCT CTCT - novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 CTCT CTCT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_006461.3 -1 reviewed p.E203fs 0.002:0.004:0.004:0.000 - - - - - - - - - NULL SUPT6H 6830 genome.wustl.edu 37 17 27023865 27023865 + Missense_Mutation SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_003170.3 +1 validated p.Y1325C 1.000 140 0% 145 42.1% 25 52% probably_damaging(0.999) deleterious(0.02) deleterious(0.873) superfamily_Nucleic acid-binding proteins SUPT6H 6830 genome.wustl.edu 37 17 27027980 27027980 + Nonsense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_003170.3 +1 validated p.Q1610* 1.000 459 0.2% 443 14.4% 118 5% - - - NULL BLMH 642 genome.wustl.edu 37 17 28598322 28598322 + Silent SNP G G C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_000386.2 -1 reviewed p.T371 1.000 253 0% 223 37.2% 35 42.8% - - - HMMPfam_Peptidase_C1_2,superfamily_Cysteine proteinases NLE1 54475 genome.wustl.edu 37 17 33466960 33466960 + Silent SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_018096.3 -1 validated p.A96 1.000 166 0% 123 15.4% 10 30% - - - NULL KRT38 8687 genome.wustl.edu 37 17 39594442 39594442 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_006771.3 -1 reviewed p.R382W 1.000 209 0% 178 42.7% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Filament KRT13 3860 genome.wustl.edu 37 17 39661598 39661598 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_153490.2 -1 reviewed p.L69F 0.000 639 0.2% 673 18.1% 1 0% unknown(0) tolerated(0.24) - NULL JUP 3728 genome.wustl.edu 37 17 39914006 39914006 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_002230.2 -1 reviewed p.R602C 1.000 22 0% 16 62.5% 151 41% probably_damaging(1) tolerated(0.06) deleterious(0.823) HMMPfam_Arm,HMMSmart_ARM,superfamily_ARM-type_fold JUP 3728 genome.wustl.edu 37 17 39914743 39914743 + Nonsense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_002230.2 -1 reviewed p.E561* 1.000 55 0% 38 18.4% 114 1.7% - - - HMMSmart_ARM,superfamily_ARM-type_fold FKBP10 60681 genome.wustl.edu 37 17 39978051 39978051 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000455106 +1 known p.A319V 0.870 140 0% 128 35.2% 208 44.7% - - - HMMSmart_SM00054,superfamily_EF-hand SLC4A1 6521 genome.wustl.edu 37 17 42328916 42328916 + Silent SNP G G T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_000342.3 -1 reviewed p.P784 0.910 172 0% 157 28.7% 0 - - - - HMMPfam_HCO3_cotransp COL1A1 1277 genome.wustl.edu 37 17 48264078 48264078 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_000088.3 -1 reviewed p.R1246Q 1.000 92 0% 95 43.2% 340 5.5% unknown(0) tolerated(0.22) - HMMPfam_COLFI,HMMSmart_SM00038 SPAG9 9043 genome.wustl.edu 37 17 49060027 49060027 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001130528.2 -1 reviewed p.Q1032R 1.000 174 0% 116 36.2% 4 50% benign(0.378) deleterious(0) deleterious(0.565) superfamily_WD40 repeat-like HLF 3131 genome.wustl.edu 37 17 53398155 53398155 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_002126.4 +1 reviewed p.R268H 1.000 41 0% 42 50% 0 - probably_damaging(1) tolerated(0.19) deleterious(0.549) HMMSmart_SM00338,HMMPfam_bZIP_2 CUEDC1 404093 genome.wustl.edu 37 17 55962643 55962643 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_017949.1 -1 provisional p.S95G 0.358 12 0% 16 37.5% 4 25% benign(0.009) tolerated(0.18) neutral(0.057) NULL EPX 8288 genome.wustl.edu 37 17 56281654 56281654 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_000502.4 +1 reviewed p.R673Q 1.000 177 0% 156 10.9% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_An_peroxidase,superfamily_Peroxidase_super SKA2 348235 genome.wustl.edu 37 17 57189646 57189646 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_182620.3 -1 validated p.D120N 0.230 355 0% 200 42% 78 62.8% benign(0.004) tolerated(0.21) neutral(0.044) NULL TEX2 55852 genome.wustl.edu 37 17 62290759 62290759 + Silent SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_018469.3 -1 validated p.D273 0.936 339 0% 304 16.4% 3 0% - - - PatternScan_PTS_HPR_SER ABCA6 23460 genome.wustl.edu 37 17 67079406 67079406 + Silent SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_080284.2 -1 reviewed p.A1474 0.932 132 0% 109 26.6% 0 - - - - HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases SDK2 54549 genome.wustl.edu 37 17 71412109 71412109 + Missense_Mutation SNP C C T rs34004346 TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001144952.1 -1 provisional p.V737M 0.997 103 0% 99 41.4% 0 - possibly_damaging(0.876) tolerated(0.23) neutral(0.383) HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III NAT9 26151 genome.wustl.edu 37 17 72767970 72767972 + In_Frame_Del DEL CCT CCT - novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 CCT CCT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_015654.3 -1 provisional p.E172in_frame_del 1.000:1.000:1.000 - - - - - - - - - NULL GALK1 2584 genome.wustl.edu 37 17 73754366 73754366 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_000154.1 -1 reviewed p.T344 0.020 14 0% 15 60% 59 35.5% - - - HMMPfam_GHMP_kinases_C,superfamily_SSF55060 MYOM1 8736 genome.wustl.edu 37 18 3129401 3129401 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_003803.3 -1 reviewed p.L875F 0.976 350 0% 368 45.4% 0 - benign(0.167) tolerated(0.37) neutral(0.034) NULL KCTD1 284252 genome.wustl.edu 37 18 24081111 24081111 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001142730.1 -1 validated p.A638V 1.000 529 0% 525 18.7% 15 6.6% probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMSmart_SM00225,superfamily_POZ domain TPGS2 25941 genome.wustl.edu 37 18 34378420 34378420 + Nonsense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_015476.2 -1 provisional p.Q217* 1.000 169 0% 177 20.9% 79 22.7% - - - NULL MYO5B 4645 genome.wustl.edu 37 18 47581652 47581652 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001080467.2 -1 reviewed p.L42 0.976 159 0% 121 14.9% 1 100% - - - superfamily_P-loop containing nucleoside triphosphate hydrolases TNFRSF11A 8792 genome.wustl.edu 37 18 60036265 60036265 + Missense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_003839.2 +1 reviewed p.P372H 0.572 71 0% 92 16.3% 0 - probably_damaging(0.993) deleterious(0.01) deleterious(0.856) NULL CSNK1G2 1455 genome.wustl.edu 37 19 1978629 1978629 + Silent SNP T T A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001319.6 +1 validated p.G109 0.989 24 0% 20 50% 61 42.6% - - - HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase CCDC94 55702 genome.wustl.edu 37 19 4258395 4258395 + Missense_Mutation SNP C C G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_018074.4 +1 provisional p.Q188E 1.000 17 0% 20 35% 24 12.5% benign(0) tolerated(1) - HMMPfam_DUF572 CHAF1A 10036 genome.wustl.edu 37 19 4409305 4409305 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_005483.2 +1 validated p.A170V 0.000 186 0% 166 33.1% 6 0% unknown(0) tolerated(0.39) - NULL MLLT1 4298 genome.wustl.edu 37 19 6222272 6222274 + In_Frame_Del DEL AGG AGG - novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 AGG AGG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_005934.3 -1 validated p.S323in_frame_del 0.643:0.503:0.456 - - - - - - - - - NULL ZNF557 79230 genome.wustl.edu 37 19 7083552 7083552 + Missense_Mutation SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001044387.1 +1 validated p.T364A 0.005 211 0% 147 31.3% 0 - possibly_damaging(0.638) tolerated(0.35) neutral(0.244) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 ARHGEF18 23370 genome.wustl.edu 37 19 7509211 7509211 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001130955.1 +1 reviewed p.C306 0.001 44 0% 65 43.1% 13 61.5% - - - HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain) OR7E24 26648 genome.wustl.edu 37 19 9362610 9362610 + Silent SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001079935.1 +1 provisional p.T297 0.080 181 0% 182 42.3% 0 - - - - HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like ZNF699 374879 genome.wustl.edu 37 19 9408089 9408089 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_198535.1 -1 provisional p.S118F 0.003 281 0.4% 153 15.7% 0 - probably_damaging(0.982) tolerated(0.68) neutral(0.428) NULL ZNF561 93134 genome.wustl.edu 37 19 9727721 9727721 + Nonsense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_152289.2 -1 validated p.E81* 0.026 325 0% 294 10.5% 8 0% - - - HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box OLFM2 93145 genome.wustl.edu 37 19 9965221 9965221 + Missense_Mutation SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_058164.2 -1 provisional p.Y336H 1.000 46 0% 52 44.2% 16 25% possibly_damaging(0.705) tolerated(0.06) deleterious(0.577) HMMPfam_OLF,HMMSmart_OLF DOCK6 57572 genome.wustl.edu 37 19 11323926 11323926 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_020812.2 -1 validated p.R1473C 1.000 36 0% 27 59.3% 12 33.3% benign(0) tolerated(0.05) neutral(0.345) NULL ZNF878 729747 genome.wustl.edu 37 19 12167108 12167108 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001080404.1 -1 inferred p.S7F 0.011 123 0% 99 11.1% 0 - unknown(0) - - NULL ZNF564 163050 genome.wustl.edu 37 19 12638197 12638197 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_144976.3 -1 validated p.R242K 0.001 322 0% 262 42.4% 1 0% benign(0.003) tolerated(0.4) neutral(0.016) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers MAST1 22983 genome.wustl.edu 37 19 12969354 12969354 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_014975.2 +1 validated p.Y389 1.000 81 0% 116 18.1% 12 25% - - - HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase LYL1 4066 genome.wustl.edu 37 19 13211811 13211811 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_005583.3 -1 provisional p.G59S 0.063 41 0% 20 30% 2 50% possibly_damaging(0.949) tolerated(0.24) neutral(0.430) NULL CACNA1A 773 genome.wustl.edu 37 19 13318811 13318811 + Silent SNP C C T rs147221323 by1000genomes TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001127222.1 -1 reviewed p.P2279 0.984 4 0.000 9 0.556 0 - - - - NULL MIR27A 407018 genome.wustl.edu 37 19 13947262 13947262 + RNA SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000385073 -1 known NULL 1.000 60 0% 80 36.2% 1 0% - - - - LPHN1 22859 genome.wustl.edu 37 19 14270975 14270975 + Silent SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001008701.2 -1 reviewed p.L588 0.951 43 2.3% 36 33.3% 6 16.6% - - - NULL CYP4F22 126410 genome.wustl.edu 37 19 15636258 15636258 + Silent SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_173483.3 +1 reviewed p.R37 0.776 157 0% 165 40.6% 0 - - - - NULL AP1M1 8907 genome.wustl.edu 37 19 16314297 16314297 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001130524.1 +1 reviewed p.D24N 1.000 249 0% 232 13.4% 6 16.6% benign(0.108) deleterious(0.02) neutral(0.392) superfamily_Longin_like UNC13A 23025 genome.wustl.edu 37 19 17728529 17728529 + Nonsense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001080421.2 -1 validated p.Q1602* 1.000 120 0% 127 34.6% 1 100% - - - NULL HOMER3 9454 genome.wustl.edu 37 19 19042848 19042848 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001145722.1 -1 reviewed p.A209 0.187 20 0% 17 29.4% 92 29.3% - - - NULL SUGP2 10147 genome.wustl.edu 37 19 19115232 19115232 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001017392.3 -1 reviewed p.P892S 0.982 79 0% 105 12.4% 24 20.8% probably_damaging(0.998) tolerated(0.48) deleterious(0.485) NULL NCAN 1463 genome.wustl.edu 37 19 19356268 19356268 + Splice_Site SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_004386.2 +1 validated e12+2 0.999 154 0% 169 36.7% 0 - - - - - ANKRD27 84079 genome.wustl.edu 37 19 33113417 33113417 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_032139.2 -1 validated p.V580I 1.000 189 0% 181 20.4% 2 0% benign(0) tolerated(1) - HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK RHPN2 85415 genome.wustl.edu 37 19 33481510 33481510 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_033103.4 -1 reviewed p.T570 0.300 132 0% 164 48.8% 8 25% - - - HMMSmart_PDZ,superfamily_PDZ RHPN2 85415 genome.wustl.edu 37 19 33487112 33487112 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_033103.4 -1 reviewed p.R414C 0.760 32 0% 45 24.4% 1 0% benign(0.019) tolerated(0.06) neutral(0.324) HMMPfam_BRO1 IGFLR1 79713 genome.wustl.edu 37 19 36230612 36230612 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_024660.2 -1 provisional p.R240 0.000 61 0% 40 50% 12 25% - - - NULL ARHGAP33 115703 genome.wustl.edu 37 19 36277869 36277869 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_052948.3 +1 reviewed p.R672C 0.236 17 0% 10 50% 13 30.7% probably_damaging(0.995) deleterious(0) deleterious(0.902) NULL ECH1 1891 genome.wustl.edu 37 19 39306966 39306966 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001398.2 -1 reviewed p.R230H 1.000 35 0% 56 17.9% 375 14.6% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_ECH,superfamily_SSF52096 PLEKHG2 64857 genome.wustl.edu 37 19 39911931 39911931 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_022835.2 +1 validated p.G499R 0.009 428 0% 345 40% 14 35.7% benign(0) tolerated(1) - NULL SPTBN4 57731 genome.wustl.edu 37 19 41060255 41060255 + Missense_Mutation SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_020971.2 +1 reviewed p.Y1626C 1.000 35 0% 50 48% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat CYP2B7P1 1556 genome.wustl.edu 37 19 41430281 41430281 + RNA SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NR_001278.1 +1 provisional NULL 0.012 95 0% 66 37.9% 0 - benign(0.011) deleterious(0.04) neutral(0.349) - TMEM145 284339 genome.wustl.edu 37 19 42818848 42818848 + Silent SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_173633.2 +1 validated p.C119 1.000 90 0% 96 35.4% 0 - - - - NULL CADM4 199731 genome.wustl.edu 37 19 44129246 44129246 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_145296.1 -1 validated p.Y304 0.988 31 0% 52 38.5% 69 53.6% - - - HMMPfam_I-set,superfamily_SSF48726 SYMPK 8189 genome.wustl.edu 37 19 46330795 46330797 + In_Frame_Del DEL GAG GAG - rs189256616 by1000genomes TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 GAG GAG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_004819.2 -1 reviewed p.L718in_frame_del 0.848:1.000:1.000 - - - - - - - - - superfamily_ARM repeat PRKD2 25865 genome.wustl.edu 37 19 47201006 47201006 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001079880.1 -1 reviewed p.S408N 1.000 25 0% 39 41% 29 51.7% benign(0.005) deleterious(0) neutral(0.445) HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like ZC3H4 23211 genome.wustl.edu 37 19 47597290 47597290 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_015168.1 -1 validated p.S143 0.052 138 0% 123 13% 5 0% - - - NULL MYH14 79784 genome.wustl.edu 37 19 50713973 50713973 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001077186.1 +1 reviewed p.N117 1.000 32 0% 47 44.7% 0 - - - - HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases KLK15 55554 genome.wustl.edu 37 19 51329987 51329987 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_017509.2 -1 reviewed p.A170T 1.000 174 0% 150 34.7% 0 - possibly_damaging(0.521) tolerated(0.18) neutral(0.231) HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases ZNF320 162967 genome.wustl.edu 37 19 53384627 53384627 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_207333.2 -1 validated p.G251D 0.997 329 0% 257 16.3% 2 0% benign(0.004) tolerated(0.15) neutral(0.241) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 ZNF813 126017 genome.wustl.edu 37 19 53987090 53987090 + Missense_Mutation SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001004301.3 +1 validated p.Q5R 0.019 741 0% 761 14.7% 2 0% possibly_damaging(0.909) tolerated(0.11) deleterious(0.633) superfamily_Krueppel-associated_box RPL28 6158 genome.wustl.edu 37 19 55899311 55899311 + Silent SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001136135.1 +1 reviewed p.P73 0.876 71 0% 75 53.3% 8083 49.3% - - - HMMPfam_Ribosomal_L28e ZNF667 63934 genome.wustl.edu 37 19 56952552 56952552 + Silent SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_022103.3 -1 validated p.T604 0.271 199 0% 141 22% 1 0% - - - HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers ZNF548 147694 genome.wustl.edu 37 19 57910278 57910278 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_152909.3 +1 validated p.C208Y 0.000 166 0% 137 40.9% 0 - benign(0) tolerated(0.69) neutral(0.002) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers SLC4A11 83959 genome.wustl.edu 37 20 3210407 3210407 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_032034.3 -1 reviewed p.Y518C 0.992 165 0% 154 35.7% 5 20% probably_damaging(0.999) deleterious(0.04) deleterious(0.839) HMMPfam_HCO3_cotransp ATRN 8455 genome.wustl.edu 37 20 3565436 3565436 + Silent SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_139321.2 +1 reviewed p.A1031 0.157 223 0% 148 15.5% 2 0% - - - HMMPfam_PSI,HMMSmart_SM00423 SLC23A2 9962 genome.wustl.edu 37 20 4843493 4843493 + Missense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_005116.5 -1 reviewed p.G473W 1.000 81 0% 81 46.9% 1 100% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Xan_ur_permease JAG1 182 genome.wustl.edu 37 20 10628641 10628641 + Missense_Mutation SNP G G T rs6040052 TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_000214.2 -1 reviewed p.L563M 1.000 429 0% 382 40.1% 6 50% probably_damaging(0.999) tolerated(0.23) deleterious(0.532) superfamily_SSF57196 SEL1L2 80343 genome.wustl.edu 37 20 13912311 13912311 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_025229.1 -1 validated p.Q74R 0.001 448 0% 234 13.2% 0 - benign(0.071) tolerated(0.16) neutral(0.065) NULL DZANK1 55184 genome.wustl.edu 37 20 18424086 18424086 + Missense_Mutation SNP G G C rs190534960 by1000genomes TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001099407.1 -1 validated p.R218G 0.926 92 0% 71 33.8% 2 100% possibly_damaging(0.928) tolerated(0.05) deleterious(0.721) NULL RALGAPA2 57186 genome.wustl.edu 37 20 20553672 20553672 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000430436 -1 known p.P733L 0.994 143 0% 152 47.4% 1 100% - - - NULL CD93 22918 genome.wustl.edu 37 20 23065242 23065242 + Missense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_012072.3 -1 reviewed p.A530S 0.000 66 0% 37 43.2% 0 - benign(0) tolerated(0.83) neutral(0.001) NULL NINL 22981 genome.wustl.edu 37 20 25456834 25456834 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_025176.4 -1 validated p.P1031 0.000 83 0% 87 48.3% 11 36.3% - - - NULL TPX2 22974 genome.wustl.edu 37 20 30386283 30386283 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_012112.4 +1 validated p.Q687 0.116 125 0% 107 44.9% 27 48.1% - - - HMMPfam_TPX2 SRC 6714 genome.wustl.edu 37 20 36022308 36022308 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_005417.3 +1 reviewed p.W121R 1.000 61 0% 60 35% 10 30% possibly_damaging(0.865) deleterious(0) deleterious(0.780) HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain CHD6 84181 genome.wustl.edu 37 20 40033870 40033870 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_032221.3 -1 reviewed p.T2504M 0.248 94 0% 89 41.6% 9 22.2% possibly_damaging(0.842) deleterious(0) deleterious(0.766) NULL TTPAL 79183 genome.wustl.edu 37 20 43117916 43117916 + Missense_Mutation SNP G G T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001039199.1 +1 validated p.G255W 1.000 61 0% 41 12.2% 1 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_CRAL_TRIO,HMMSmart_SEC14,superfamily_CRAL_TRIO_C AURKA 6790 genome.wustl.edu 37 20 54961464 54961464 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_003600.2 -1 reviewed p.R56 0.209 296 0% 260 39.6% 4 25% - - - NULL TAF4 6874 genome.wustl.edu 37 20 60587964 60587964 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_003185.3 -1 reviewed p.R516 1.000 159 0% 113 12.4% 5 0% - - - NULL DOPEY2 9980 genome.wustl.edu 37 21 37618895 37618895 + Silent SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_005128.2 +1 validated p.T1539 0.000 55 0% 55 16.4% 2 0% - - - NULL SLC37A1 54020 genome.wustl.edu 37 21 43979171 43979171 + Missense_Mutation SNP T T A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_018964.3 +1 reviewed p.I318N 1.000 123 0% 128 18% 4 25% possibly_damaging(0.949) deleterious(0) deleterious(0.838) HMMPfam_MFS_1,superfamily_MFS general substrate transporter SUMO3 6612 genome.wustl.edu 37 21 46228918 46228918 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000397898 -1 known p.C89Y 0.000 196 0.5% 184 36.4% 0 - benign(0.014) deleterious(0.01) neutral(0.406) NULL CDC45 8318 genome.wustl.edu 37 22 19504136 19504136 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_003504.3 +1 reviewed p.I509 0.998 82 0% 91 41.8% 49 40.8% - - - HMMPfam_CDC45 LZTR1 8216 genome.wustl.edu 37 22 21346005 21346005 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_006767.3 +1 reviewed p.R294C 1.000 43 0% 49 51% 15 33.3% probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain MYO18B 84700 genome.wustl.edu 37 22 26304379 26304379 + Missense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_032608.5 +1 reviewed p.R1747S 1.000 120 0% 109 24.8% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) NULL CACNA1I 8911 genome.wustl.edu 37 22 40060844 40060844 + Missense_Mutation SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_021096.3 +1 reviewed p.V1256A 1.000 59 0% 71 12.7% 0 - benign(0.364) tolerated(0.12) neutral(0.377) HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels NAGA 4668 genome.wustl.edu 37 22 42462770 42462770 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_000262.2 -1 reviewed p.R181C 1.000 36 0% 32 25% 10 10% probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_Glyco_hydro_cat PACSIN2 11252 genome.wustl.edu 37 22 43289487 43289487 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_007229.3 -1 reviewed p.R65C 1.000 21 0% 37 29.7% 4 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_FCH,HMMSmart_SM00055 MPPED1 758 genome.wustl.edu 37 22 43821058 43821058 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001044370.1 +1 validated p.L23 1.000 61 0% 67 14.9% 0 - - - - NULL MPPED1 758 genome.wustl.edu 37 22 43870647 43870647 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001044370.1 +1 validated p.I146 1.000 126 0.8% 129 35.7% 0 - - - - HMMPfam_Metallophos,superfamily_Metallo-dependent phosphatases PHF21B 112885 genome.wustl.edu 37 22 45283873 45283873 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_138415.3 -1 validated p.G389 0.011 16 0% 11 72.7% 2 50% - - - HMMSmart_SM00249,superfamily_FYVE/PHD zinc finger,HMMPfam_PHD FAM47C 442444 genome.wustl.edu 37 X 37028088 37028088 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001013736.2 +1 validated p.H535 0.029 206 0% 243 21.8% 0 - - - - NULL PRRG1 5638 genome.wustl.edu 37 X 37312841 37312841 + Silent SNP T T C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_000950.2 +1 reviewed p.I208 0.998 204 0% 170 22.4% 2 0% - - - NULL USP9X 8239 genome.wustl.edu 37 X 41029342 41029342 + Missense_Mutation SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001039590.2 +1 reviewed p.T911A 1.000 476 0% 398 19.1% 1 0% benign(0.135) deleterious(0.01) neutral(0.417) NULL KDM6A 7403 genome.wustl.edu 37 X 44894187 44894187 + Silent SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_021140.2 +1 reviewed p.L192 1.000 907 0% 618 36.4% 0 - - - - superfamily_SSF48452 ZNF182 7569 genome.wustl.edu 37 X 47835701 47835701 + Missense_Mutation SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_006962.1 -1 reviewed p.E595D 1.000 352 0% 287 18.1% 4 0% benign(0.363) deleterious(0) deleterious(0.560) superfamily_SSF57667 PHF8 23133 genome.wustl.edu 37 X 54037560 54037560 + Missense_Mutation SNP G G T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_015107.2 -1 reviewed p.P314H 1.000 252 0.4% 175 39.4% 1 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_SM00558,HMMPfam_JmjC,superfamily_Clavaminate synthase-like MED12 9968 genome.wustl.edu 37 X 70361121 70361121 + Silent SNP A A G novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_005120.2 +1 reviewed p.Q2103 0.916 70 0% 100 35% 48 75% - - - NULL MED12 9968 genome.wustl.edu 37 X 70361205 70361205 + Silent SNP C C A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_005120.2 +1 reviewed p.P2131 1.000 165 0.6% 145 42.1% 114 0% - - - NULL LOC727838 727838 genome.wustl.edu 37 X 118207204 118207204 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c XM_002343842.1 +1 model p.D6N 0.000 8 0.000 11 0.455 0 - - - - NULL GRIA3 2892 genome.wustl.edu 37 X 122613916 122613916 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c ENST00000371256 +1 known p.T776M 1.000 358 0% 276 36.6% 0 - possibly_damaging(0.95) deleterious(0.01) deleterious(0.799) HMMPfam_Lig_chan,HMMSmart_PBPe,superfamily_SSF53850 SMARCA1 6594 genome.wustl.edu 37 X 128599660 128599660 + Missense_Mutation SNP G G T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_003069.3 -1 reviewed p.T956N 1.000 417 0% 314 40.1% 38 0% benign(0.089) tolerated(0.17) neutral(0.066) superfamily_Homeodomain-like,HMMPfam_SLIDE,superfamily_P-loop containing nucleoside triphosphate hydrolases FRMD7 90167 genome.wustl.edu 37 X 131234652 131234652 + Missense_Mutation SNP A A C novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_194277.2 -1 reviewed p.H50Q 0.998 324 0% 221 17.2% 0 - benign(0.008) tolerated(0.41) neutral(0.015) HMMPfam_FERM_N,HMMSmart_B41,superfamily_SSF54236 HS6ST2 90161 genome.wustl.edu 37 X 132091135 132091135 + Silent SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001077188.1 -1 reviewed p.L216 0.997 40 0% 61 44.3% 3 0% - - - HMMPfam_HS6ST TFDP3 51270 genome.wustl.edu 37 X 132352203 132352203 + Missense_Mutation SNP C C T novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_016521.2 -1 reviewed p.V29I 0.398 212 0% 237 40.9% 0 - possibly_damaging(0.76) tolerated(0.13) deleterious(0.534) NULL MTMR1 8776 genome.wustl.edu 37 X 149905204 149905204 + Silent SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_003828.2 +1 reviewed p.A398 0.000 316 0% 263 35% 1 100% - - - HMMSmart_SM00404,superfamily_(Phosphotyrosine protein) phosphatases II ATP2B3 492 genome.wustl.edu 37 X 152821594 152821594 + Missense_Mutation SNP G G A novel TCGA-DI-A0WH-01A-12D-A12J-09 TCGA-DI-A0WH-10B-01D-A12J-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 6b49e85b-4a93-463d-8af1-defb834b39c7 dbcfe0ad-a2a1-453d-b357-5dfa8352966c NM_001001344.2 +1 reviewed p.A716T 1.000 83 0% 74 37.8% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Hydrolase,superfamily_HAD-like,superfamily_Calcium ATPase transmembrane domain M