Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID transcript_name strand transcript_status amino_acid_change ucsc_cons normal_depth normal_vaf tumor_depth tumor_vaf rna_depth rna_vaf polyphen sift condel domain PLEKHN1 84069 genome.wustl.edu 37 1 909265 909265 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_032129.2 +1 validated p.P496L 0.280 39 0% 26 23.1% 8 62.5% possibly_damaging(0.894) tolerated(0.25) neutral(0.389) NULL ARHGEF16 27237 genome.wustl.edu 37 1 3379836 3379836 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_014448.3 +1 reviewed p.P63L 0.000 30 0% 25 28% 19 63.1% benign(0.003) deleterious(0.01) neutral(0.406) NULL RPL22 6146 ucsc.edu 37 1 6257785 6257785 + Frame_Shift_Del DEL T - - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_000983.3 -1 reviewed p.K15fs 1 - - - - - - - - - HMMPfam_Ribosomal_L22e MTOR 2475 genome.wustl.edu 37 1 11273543 11273543 + Missense_Mutation SNP T T A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004958.3 -1 reviewed p.E1066D 0.976 108 0% 141 32.6% 9 44.4% probably_damaging(0.99) deleterious(0.02) deleterious(0.825) superfamily_ARM-type_fold PTCHD2 57540 genome.wustl.edu 37 1 11594485 11594485 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000304391 +1 known p.A28T 1.000 146 0% 146 32.2% 1 0% unknown(0) - - NULL KIAA2013 90231 genome.wustl.edu 37 1 11983474 11983474 + Missense_Mutation SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_138346.1 -1 provisional p.M369T 1.000 124 0% 109 33% 119 36.9% benign(0.269) tolerated(0.09) neutral(0.325) HMMPfam_DUF2152 SPEN 23013 genome.wustl.edu 37 1 16258764 16258764 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_015001.2 +1 reviewed p.R2010H 0.047 32 0% 18 22.2% 5 0% possibly_damaging(0.574) tolerated(0.08) deleterious(0.497) NULL ZBTB17 7709 genome.wustl.edu 37 1 16271569 16271569 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_003443.2 -1 validated p.E264K 1.000 232 0% 288 34.7% 18 27.7% possibly_damaging(0.942) deleterious(0.05) deleterious(0.732) NULL AKR7A2 8574 genome.wustl.edu 37 1 19632595 19632595 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_003689.2 -1 validated p.A279T 1.000 124 0% 115 34.8% 144 37.5% probably_damaging(0.997) tolerated(0.11) deleterious(0.738) superfamily_Aldo/ket_red EIF4G3 8672 genome.wustl.edu 37 1 21137239 21137239 + Missense_Mutation SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_003760.3 -1 validated p.Q1523R 1.000 215 0% 276 29.3% 72 45.8% possibly_damaging(0.511) deleterious(0.03) deleterious(0.536) HMMPfam_W2,HMMSmart_SM00515,superfamily_ARM repeat ECE1 1889 genome.wustl.edu 37 1 21586832 21586832 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001397.2 -1 reviewed p.R183C 1.000 353 0% 279 28.3% 52 19.2% benign(0.117) deleterious(0.05) neutral(0.355) "HMMPfam_Peptidase_M13_N,superfamily_Metalloproteases (""zincins"") catalytic domain" ECE1 1889 genome.wustl.edu 37 1 21605779 21605779 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001397.2 -1 reviewed p.R62Q 0.993 120 0% 91 14.3% 31 6.4% possibly_damaging(0.859) deleterious(0.03) deleterious(0.697) NULL IL28RA 163702 genome.wustl.edu 37 1 24495946 24495946 + Missense_Mutation SNP G G T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_170743.2 -1 reviewed p.P110T 0.396 137 0% 106 20.8% 0 - benign(0.163) deleterious(0.04) neutral(0.363) superfamily_Fibronectin type III RUNX3 864 genome.wustl.edu 37 1 25256086 25256086 + Missense_Mutation SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001031680.2 -1 reviewed p.A106S 1.000 23 0% 24 62.5% 1 0% possibly_damaging(0.497) deleterious(0.01) deleterious(0.572) superfamily_p53-like transcription factors,HMMPfam_Runt MAN1C1 57134 genome.wustl.edu 37 1 26107499 26107499 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_020379.2 +1 validated p.E516K 1.000 64 0% 49 38.8% 8 0% benign(0.132) deleterious(0.04) neutral(0.360) HMMPfam_Glyco_hydro_47,superfamily_Glyco_hydro_47 ARID1A 8289 genome.wustl.edu 37 1 27106245 27106245 + Frame_Shift_Del DEL C C - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_006015.4 +1 reviewed p.K1953fs 1.000 - - - - - - - - - NULL SFN 2810 genome.wustl.edu 37 1 27189997 27189997 + Silent SNP C C G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_006142.3 +1 validated p.T98 0.020 71 0% 84 31% 110 40% - - - HMMPfam_14-3-3,HMMSmart_SM00101,superfamily_14-3-3 protein ZMYM4 9202 genome.wustl.edu 37 1 35827384 35827384 + Silent SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000457946 +1 known p.C27R 1.000 228 0% 331 30.5% 6 50% - - - NULL TEKT2 27285 genome.wustl.edu 37 1 36552435 36552435 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_014466.2 +1 reviewed p.R207C 0.990 183 0% 150 31.3% 194 48.4% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Tektin ADPRHL2 54936 genome.wustl.edu 37 1 36557321 36557321 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_017825.2 +1 reviewed p.E137 1.000 183 0% 139 10.8% 37 0% - - - HMMPfam_ADP_ribosyl_GH,superfamily_Ribosyl_crysJ1 IPO13 9670 genome.wustl.edu 37 1 44421995 44421995 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_014652.3 +1 reviewed p.Y275 0.672 125 0% 153 32% 15 26.6% - - - superfamily_ARM-type_fold PTCH2 8643 genome.wustl.edu 37 1 45288829 45288829 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_003738.4 -1 reviewed p.A1090V 1.000 110 0% 142 33.1% 5 0% benign(0.001) tolerated(0.5) neutral(0.010) HMMPfam_Patched,superfamily_Multidrug efflux transporter AcrB transmembrane domain TESK2 10420 genome.wustl.edu 37 1 45810729 45810729 + Missense_Mutation SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_007170.2 -1 reviewed p.R500L 0.999 175 0% 268 28.4% 3 66.6% benign(0.267) tolerated(0.11) neutral(0.300) NULL EPS15 2060 genome.wustl.edu 37 1 51873966 51873966 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001981.2 -1 reviewed p.S438 0.006 450 0% 479 36.5% 9 22.2% - - - NULL FAM159A 348378 genome.wustl.edu 37 1 53108542 53108542 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001042693.1 +1 validated p.A64T 0.998 352 0% 390 26.4% 3 33.3% probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL L1TD1 54596 genome.wustl.edu 37 1 62675692 62675694 + In_Frame_Del DEL GAA GAA - rs137939193 byCluster;by1000genomes TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 GAA GAA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_019079.4 +1 validated p.E419in_frame_del 0.016:0.007:0.000 - - - - - - - - - NULL FPGT 8790 genome.wustl.edu 37 1 74665362 74665362 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_003838.2 +1 reviewed p.R33C 0.931 340 0% 439 27.8% 5 0% probably_damaging(0.991) tolerated(0.08) deleterious(0.744) NULL IFI44L 10964 genome.wustl.edu 37 1 79093741 79093741 + Missense_Mutation SNP G G T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_006820.2 +1 validated p.Q47H 0.900 210 0% 268 25.7% 5 20% probably_damaging(0.996) deleterious(0) deleterious(0.906) NULL RNPC3 55599 genome.wustl.edu 37 1 104076415 104076415 + Missense_Mutation SNP T T A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_017619.3 +1 reviewed p.F99I 1.000 300 0% 363 29.5% 2 0% possibly_damaging(0.712) deleterious(0.02) deleterious(0.641) superfamily_SSF54928 LOC100129138 100129138 genome.wustl.edu 37 1 104615785 104615785 + RNA SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef XR_036957.2 +1 model NULL 0.006 54 0% 38 44.7% 1 0% - - - - KCNC4 3749 genome.wustl.edu 37 1 110774881 110774881 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004978.3 +1 reviewed p.P620S 0.027 178 0% 162 32.7% 4 25% benign(0) tolerated(0.56) neutral(0.006) NULL KCND3 3752 genome.wustl.edu 37 1 112524667 112524669 + In_Frame_Del DEL AGA AGA - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 AGA AGA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004980.3 -1 reviewed p.F227in_frame_del 1.000:0.998:1.000 - - - - - - - - - superfamily_Voltage-gated potassium channels WNT2B 7482 genome.wustl.edu 37 1 113052049 113052049 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_024494.2 +1 reviewed p.R55 0.983 42 0% 21 19% 2 0% - - - NULL PDE4DIP 9659 genome.wustl.edu 37 1 144867984 144867984 + Missense_Mutation SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_014644.4 -1 validated p.G1819W 1.000 568 0% 527 15.4% 3 0% probably_damaging(1) deleterious(0) deleterious(0.945) NULL TCHH 7062 genome.wustl.edu 37 1 152085445 152085445 + Missense_Mutation SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_007113.2 -1 provisional p.Q83R 1.000 249 0% 204 17.2% 0 - probably_damaging(0.962) - - superfamily_SSF47473 HRNR 388697 genome.wustl.edu 37 1 152191382 152191382 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001009931.1 -1 validated p.R908Q 0.000 146 0% 195 30.8% 0 - unknown(0) - - NULL INTS3 65123 genome.wustl.edu 37 1 153745128 153745128 + Silent SNP G G A rs6663011 byCluster;byFrequency;by2Hit2Allele;by1000genomes TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_023015.3 +1 validated p.T945 0.955 116 0% 98 34.7% 83 49.3% - - - NULL ASH1L 55870 genome.wustl.edu 37 1 155452086 155452086 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_018489.2 -1 reviewed p.T192M 0.999 279 0% 370 31.4% 0 - benign(0.01) tolerated(0.09) neutral(0.297) NULL GON4L 54856 genome.wustl.edu 37 1 155735399 155735399 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001037533.1 -1 validated p.R1289C 0.200 249 0% 304 35.9% 8 50% possibly_damaging(0.783) deleterious(0) deleterious(0.738) NULL ETV3L 440695 genome.wustl.edu 37 1 157069064 157069064 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001004341.2 -1 validated p.R55 1.000 195 0% 198 29.3% 2 0% - - - HMMPfam_Ets,HMMSmart_ETS,superfamily_SSF46785 ETV3 2117 genome.wustl.edu 37 1 157103900 157103900 + Missense_Mutation SNP T T G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_005240.1 -1 validated p.K135T 1.000 534 0% 595 32.1% 1 100% benign(0) tolerated(0.78) neutral(0.001) superfamily_SSF46785 OR6K2 81448 genome.wustl.edu 37 1 158669691 158669691 + Missense_Mutation SNP A A C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001005279.1 -1 provisional p.L251R 0.009 257 0% 321 37.1% 0 - probably_damaging(0.998) deleterious(0) deleterious(0.919) HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like C1orf111 284680 genome.wustl.edu 37 1 162344068 162344068 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_182581.3 -1 validated p.V186M 0.022 88 0% 80 37.5% 1 0% benign(0.002) tolerated(0.5) neutral(0.010) NULL CFHR2 3080 genome.wustl.edu 37 1 196920147 196920147 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_005666.2 +1 validated p.C140Y 0.053 228 0.4% 315 29.8% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain LHX9 56956 genome.wustl.edu 37 1 197890498 197890498 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_020204.2 +1 reviewed p.R148C 1.000 65 0% 48 10.4% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_LIM,HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,superfamily_Glucocorticoid receptor-like (DNA-binding domain) SLC26A9 115019 genome.wustl.edu 37 1 205901027 205901027 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_134325.2 -1 reviewed p.H171 0.967 83 0% 89 27% 1 0% - - - NULL DTL 51514 genome.wustl.edu 37 1 212273891 212273891 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_016448.2 +1 validated p.S520L 0.445 167 0% 187 28.9% 7 28.5% possibly_damaging(0.918) deleterious(0.02) deleterious(0.752) NULL ANGEL2 90806 genome.wustl.edu 37 1 213180442 213180444 + In_Frame_Del DEL AAA AAA - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 AAA AAA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000310246 -1 known p.F226in_frame_del 0.007:0.006:0.011 - - - - - - - - - HMMPfam_Exo_endo_phos OBSCN 84033 genome.wustl.edu 37 1 228403423 228403423 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001098623.1 +1 reviewed p.R663H 0.075 33 0% 35 11.4% 1 0% probably_damaging(0.991) - - HMMSmart_SM00409,superfamily_Immunoglobulin AGT 183 genome.wustl.edu 37 1 230839047 230839047 + Missense_Mutation SNP T T G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_000029.3 -1 reviewed p.E433A 0.945 201 0% 227 36.6% 1 100% benign(0.004) tolerated(0.39) neutral(0.016) HMMPfam_Serpin,HMMSmart_SM00093,superfamily_Serpins GNPAT 8443 genome.wustl.edu 37 1 231401831 231401831 + Missense_Mutation SNP A A T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_014236.3 +1 reviewed p.I282F 1.000 348 0% 477 34.2% 34 47% probably_damaging(0.999) deleterious(0.01) deleterious(0.896) HMMPfam_Acyltransferase,HMMSmart_PlsC,superfamily_SSF69593 SLC35F3 148641 genome.wustl.edu 37 1 234041319 234041319 + Missense_Mutation SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_173508.2 +1 provisional p.D33G 1.000 33 0% 27 18.5% 0 - probably_damaging(0.998) deleterious(0) deleterious(0.919) NULL B3GALNT2 148789 genome.wustl.edu 37 1 235658047 235658047 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_152490.2 -1 validated p.N68 0.953 332 0% 348 31.3% 5 20% - - - NULL FMN2 56776 genome.wustl.edu 37 1 240256677 240256677 + Frame_Shift_Del DEL C C - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_020066.4 +1 validated p.R424fs 1.000 - - - - - - - - - NULL MAP1LC3C 440738 genome.wustl.edu 37 1 242161826 242161826 + Missense_Mutation SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001004343.2 -1 validated p.S71G 0.919 64 0% 52 40.4% 0 - benign(0) tolerated(0.13) neutral(0.253) HMMPfam_MAP1_LC3,superfamily_SSF54236 OR2M3 127062 genome.wustl.edu 37 1 248367072 248367072 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001004689.1 +1 provisional p.R235C 0.000 400 0% 538 29.6% 0 - benign(0.002) deleterious(0.01) neutral(0.406) HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like GRHL1 29841 genome.wustl.edu 37 2 10136032 10136032 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_198182.2 +1 reviewed p.G320S 0.001 228 0.4% 416 26.9% 16 25% benign(0) tolerated(0.54) neutral(0.007) NULL KLF11 8462 genome.wustl.edu 37 2 10187922 10187922 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_003597.4 +1 reviewed p.A153V 0.000 98 0% 96 22.9% 8 0% benign(0) tolerated(0.76) neutral(0.001) NULL NBAS 51594 genome.wustl.edu 37 2 15330431 15330431 + Nonsense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000442506 -1 known p.W1224* 0.128 410 0% 548 20.6% 77 25.9% benign(0.134) tolerated(0.85) neutral(0.012) NULL NBAS 51594 genome.wustl.edu 37 2 15608548 15608548 + Missense_Mutation SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_015909.2 -1 validated p.L612P 1.000 368 0% 560 35.7% 5 20% unknown(0) deleterious(0.01) - NULL ADCY3 109 genome.wustl.edu 37 2 25046099 25046099 + Missense_Mutation SNP T T A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004036.3 -1 reviewed p.E954D 1.000 121 0% 194 25.3% 11 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Guanylate_cyc,HMMSmart_CYCc,superfamily_A/G_cyclase OTOF 9381 genome.wustl.edu 37 2 26705445 26705445 + Nonsense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_194248.2 -1 reviewed p.Q470* 1.000 85 0% 107 18.7% 0 - - - - HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB) CAD 790 genome.wustl.edu 37 2 27464041 27464041 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000456311 +1 known p.A223T 1.000 119 0% 171 23.4% 38 23.6% - - - superfamily_Aspartate/ornithine carbamoyltransferase XDH 7498 genome.wustl.edu 37 2 31609394 31609394 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_000379.3 -1 reviewed p.L227 1.000 190 0% 234 20.9% 0 - - - - superfamily_FAD-binding_2 SRD5A2 6716 genome.wustl.edu 37 2 31805778 31805778 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000233139 -1 known p.A64T 0.993 12 0% 24 41.7% 0 - - - - NULL LRPPRC 10128 genome.wustl.edu 37 2 44175302 44175302 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_133259.3 -1 reviewed p.R627C 1.000 378 0.3% 674 15% 18 0% benign(0.035) tolerated(0.11) neutral(0.274) NULL TTC7A 57217 genome.wustl.edu 37 2 47288073 47288073 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_020458.2 +1 validated p.T773M 0.994 51 0% 66 31.8% 50 32% probably_damaging(0.987) deleterious(0) deleterious(0.881) HMMPfam_TPR_2,HMMSmart_SM00028,superfamily_TPR-like C2orf61 285051 genome.wustl.edu 37 2 47314163 47314163 + Missense_Mutation SNP T T A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000449846 -1 known p.I124F 0.940 580 0% 994 16.6% 0 - unknown(0) - - NULL ERLEC1 27248 genome.wustl.edu 37 2 54024698 54024698 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_015701.3 +1 validated p.R132Q 1.000 337 0% 461 18.4% 44 18.1% probably_damaging(0.996) deleterious(0.01) deleterious(0.867) HMMPfam_PRKCSH PRADC1 84279 genome.wustl.edu 37 2 73455586 73455586 + Missense_Mutation SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_032319.1 -1 provisional p.W188L 1.000 165 0% 253 49.8% 45 51.1% probably_damaging(0.991) deleterious(0) deleterious(0.889) superfamily_Transferrin receptor ectodomain apical domain SEMA4F 10505 genome.wustl.edu 37 2 74901710 74901710 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004263.3 +1 provisional p.G303D 1.000 267 0% 317 54.9% 2 0% benign(0.183) tolerated(0.28) neutral(0.049) HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain SEMA4F 10505 genome.wustl.edu 37 2 74902418 74902418 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004263.3 +1 provisional p.L427 1.000 132 0% 200 27% 4 25% - - - HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain ANKRD36BP2 645784 genome.wustl.edu 37 2 89084340 89084340 + RNA SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NR_015424.1 +1 predicted NULL 0.030 81 0% 182 52.2% 0 - - - - - SNRNP200 23020 genome.wustl.edu 37 2 96970473 96970473 + Missense_Mutation SNP T T A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_014014.3 -1 reviewed p.K60I 1.000 247 0% 317 17% 28 17.8% possibly_damaging(0.928) deleterious(0.01) deleterious(0.781) NULL CNNM4 26504 genome.wustl.edu 37 2 97474316 97474316 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_020184.3 +1 reviewed p.P656L 0.301 185 0% 270 29.6% 13 15.3% benign(0.003) tolerated(0.08) neutral(0.300) HMMSmart_cNMP CNNM4 26504 genome.wustl.edu 37 2 97474387 97474387 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_020184.3 +1 reviewed p.A680T 0.037 222 0% 330 47% 10 70% benign(0.006) tolerated(0.11) neutral(0.272) HMMSmart_cNMP MFSD9 84804 genome.wustl.edu 37 2 103353082 103353082 + Missense_Mutation SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000421966 -1 known p.G63V 0.002 48 0% 36 19.4% 1 0% unknown(0) - - NULL RGPD4 285190 genome.wustl.edu 37 2 108460042 108460042 + Missense_Mutation SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_182588.2 +1 validated p.E213G 0.994 724 0% 1078 6.1% 0 - possibly_damaging(0.85) tolerated(0.1) deleterious(0.613) superfamily_SSF48452 POTEF 728378 genome.wustl.edu 37 2 130877731 130877731 + Missense_Mutation SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001099771.2 -1 validated p.W120R 0.000 169 0% 193 41.5% 0 - benign(0.014) deleterious(0.01) neutral(0.406) superfamily_ANK LRP1B 53353 genome.wustl.edu 37 2 141298572 141298572 + Nonsense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_018557.2 -1 validated p.R2495* 0.981 414 0% 606 44.6% 0 - - - - HMMSmart_EGF,superfamily_SSF63825 DAPL1 92196 genome.wustl.edu 37 2 159718937 159718937 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000343761 +1 known p.T81M 0.012 25 0% 44 31.8% 1 0% benign(0.022) deleterious(0.01) neutral(0.407) NULL TANK 10010 genome.wustl.edu 37 2 162088035 162088035 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004180.2 +1 reviewed p.P358 0.998 42 0% 107 45.8% 91 58.2% - - - NULL COBLL1 22837 genome.wustl.edu 37 2 165557176 165557176 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_014900.3 -1 validated p.P478L 0.067 382 0% 585 42.7% 2 0% benign(0) tolerated(0.53) neutral(0.007) NULL SCN2A 6326 genome.wustl.edu 37 2 166165261 166165261 + Missense_Mutation SNP C C T rs121917748 TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001040142.1 +1 reviewed p.R188W 0.998 479 0.2% 751 25.2% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels SP3 6670 genome.wustl.edu 37 2 174820868 174820868 + Silent SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000416195 -1 known p.V81A 1.000 193 0% 236 25.4% 16 37.5% - - - NULL TTN 7273 genome.wustl.edu 37 2 179422066 179422066 + Missense_Mutation SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000356127 -1 known p.Y26738C 1.000 474 0% 795 50.1% 0 - probably_damaging(1) - - HMMPfam_fn3,HMMSmart_SM00060 TTN 7273 genome.wustl.edu 37 2 179576811 179576811 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000356127 -1 known p.T8005M 0.038 108 0% 118 25.4% 0 - unknown(0) - - HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set TTN 7273 genome.wustl.edu 37 2 179643691 179643691 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_133379.3 -1 reviewed p.A1373V 1.000 204 0% 241 25.3% 0 - possibly_damaging(0.741) - - HMMPfam_I-set,superfamily_SSF48726 COL5A2 1290 genome.wustl.edu 37 2 189943268 189943269 + Frame_Shift_Del DEL CT CT - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 CT CT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_000393.3 -1 reviewed p.G345fs 1.000:0.999 - - - - - - - - - HMMPfam_Collagen CASP10 843 genome.wustl.edu 37 2 202050825 202050825 + Nonsense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_032977.3 +1 reviewed p.R109* 0.000 76 0% 85 31.8% 4 0% - - - superfamily_DEATH_like ALS2 57679 genome.wustl.edu 37 2 202625903 202625903 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_020919.3 -1 reviewed p.A272T 0.986 450 0% 684 22.2% 20 25% possibly_damaging(0.575) deleterious(0.02) deleterious(0.580) NULL NRP2 8828 genome.wustl.edu 37 2 206562437 206562437 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_201266.1 +1 reviewed p.H81 0.956 136 0% 276 41.7% 18 22.2% - - - HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain SMARCAL1 50485 genome.wustl.edu 37 2 217340071 217340071 + Missense_Mutation SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001127207.1 +1 reviewed p.E775G 0.082 97 0% 116 44.8% 28 28.5% benign(0.008) tolerated(0.17) neutral(0.059) HMMPfam_Helicase_C,HMMSmart_HELICc,superfamily_SSF52540 VIL1 7429 genome.wustl.edu 37 2 219292995 219292995 + Missense_Mutation SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_007127.2 +1 reviewed p.L168M 1.000 185 0% 344 45.1% 4 75% probably_damaging(0.98) deleterious(0.03) deleterious(0.788) HMMSmart_GEL,HMMPfam_Gelsolin,superfamily_SSF55753 STK36 27148 genome.wustl.edu 37 2 219559337 219559337 + Silent SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000431040 +1 known p.M24T 1.000 89 0% 146 43.8% 30 40% - - - NULL DOCK10 55619 genome.wustl.edu 37 2 225651773 225651773 + Missense_Mutation SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_014689.2 -1 validated p.F1874S 1.000 224 0% 279 18.6% 3 0% benign(0.023) deleterious(0) neutral(0.446) NULL DNER 92737 genome.wustl.edu 37 2 230231608 230231608 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_139072.3 -1 validated p.A695T 1.000 49 0% 100 43% 0 - possibly_damaging(0.905) deleterious(0) deleterious(0.804) NULL SH3BP4 23677 genome.wustl.edu 37 2 235951774 235951774 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_014521.2 +1 reviewed p.C787 1.000 34 0% 35 28.6% 36 38.8% - - - NULL D2HGDH 728294 genome.wustl.edu 37 2 242689645 242689645 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000432449 +1 known p.V65I 1.000 92 0% 140 49.3% 29 68.9% - - - HMMPfam_FAD-oxidase_C,superfamily_FAD-linked oxidases C-terminal domain ITPR1 3708 genome.wustl.edu 37 3 4825556 4825556 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001099952.2 +1 reviewed p.D2141 0.055 349 0% 384 27.3% 15 0% - - - NULL RPUSD3 285367 genome.wustl.edu 37 3 9879839 9879839 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_173659.3 -1 validated p.A306V 0.934 110 0% 131 31.3% 52 30.7% benign(0.065) tolerated(0.34) neutral(0.028) superfamily_Pseudouridine synthase ACVR2B 93 genome.wustl.edu 37 3 38518825 38518825 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001106.3 +1 reviewed p.A34T 1.000 82 0% 73 28.8% 9 55.5% benign(0.001) tolerated(0.55) neutral(0.007) HMMPfam_Activin_recp,superfamily_Snake toxin-like SCN10A 6336 genome.wustl.edu 37 3 38753770 38753770 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_006514.2 -1 validated p.S1324L 0.000 239 0% 252 27% 0 - benign(0.005) deleterious(0.02) neutral(0.383) HMMPfam_Ion_trans,superfamily_SSF81324 FYCO1 79443 genome.wustl.edu 37 3 46016789 46016789 + Missense_Mutation SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_024513.2 -1 validated p.V113L 1.000 229 0% 293 32.4% 8 12.5% benign(0.098) deleterious(0.03) neutral(0.372) NULL NBEAL2 23218 genome.wustl.edu 37 3 47037248 47037248 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_015175.1 +1 validated p.A648V 0.019 212 0.9% 200 33.5% 7 57.1% possibly_damaging(0.633) tolerated(0.67) neutral(0.224) NULL CCDC51 79714 genome.wustl.edu 37 3 48475152 48475152 + Silent SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_024661.3 -1 validated p.L148 1.000 129 0% 127 29.9% 17 35.2% - - - NULL GRM2 2912 genome.wustl.edu 37 3 51743246 51743246 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_000839.3 +1 reviewed p.R83C 1.000 52 0% 51 19.6% 0 - possibly_damaging(0.66) deleterious(0) deleterious(0.677) HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I DNAH1 25981 genome.wustl.edu 37 3 52382985 52382985 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_015512.4 +1 validated p.R730W 0.922 69 0% 93 30.1% 2 50% benign(0.145) tolerated(0.06) neutral(0.335) NULL IL17RD 54756 genome.wustl.edu 37 3 57132318 57132318 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_017563.3 -1 validated p.A471 0.244 79 0% 69 37.7% 4 0% - - - HMMPfam_SEFIR ROBO1 6091 genome.wustl.edu 37 3 78700896 78700896 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_002941.3 -1 reviewed p.A933V 1.000 145 0% 146 30.1% 6 0% benign(0.109) deleterious(0) neutral(0.453) NULL MYLK 4638 genome.wustl.edu 37 3 123419554 123419554 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_053025.3 -1 reviewed p.E921K 0.993 129 0% 131 35.9% 43 6.9% probably_damaging(1) deleterious(0) deleterious(0.945) NULL MME 4311 genome.wustl.edu 37 3 154834290 154834290 + Silent SNP T T A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_000902.3 +1 reviewed p.T127 0.000 283 0% 387 27.9% 2 0% - - - "HMMPfam_Peptidase_M13_N,superfamily_Metalloproteases (""zincins"") catalytic domain" RSRC1 51319 genome.wustl.edu 37 3 158178785 158178785 + Nonsense_Mutation SNP G G T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000482822 +1 known p.G109* 0.993 314 0% 482 29.5% 19 36.8% probably_damaging(0.99) deleterious(0) deleterious(0.886) NULL ZBBX 79740 genome.wustl.edu 37 3 167023446 167023446 + Silent SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_024687.2 -1 validated p.T570 0.003 202 0% 161 27.3% 28 60.7% - - - NULL PIK3CA 5290 genome.wustl.edu 37 3 178936095 178936095 + Missense_Mutation SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_006218.2 +1 reviewed p.Q546R 1.000 250 0% 289 31.8% 4 25% probably_damaging(0.998) deleterious(0.05) deleterious(0.820) HMMPfam_PI3Ka,HMMSmart_PI3Ka,superfamily_ARM-type_fold DVL3 1857 genome.wustl.edu 37 3 183885816 183885816 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004423.3 +1 reviewed p.S487 0.062 214 0% 188 33% 96 40.6% - - - HMMPfam_DEP,HMMSmart_DEP,superfamily_SSF46785 LRRC15 131578 genome.wustl.edu 37 3 194080772 194080772 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001135057.2 -1 validated p.P340L 0.792 109 0% 83 33.7% 0 - possibly_damaging(0.896) deleterious(0.04) deleterious(0.702) HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_L domain-like LRRC33 375387 genome.wustl.edu 37 3 196388277 196388277 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_198565.1 +1 provisional p.T588I 0.085 100 0% 58 29.3% 3 0% benign(0.282) deleterious(0.03) neutral(0.451) superfamily_SSF52058 FGFRL1 53834 genome.wustl.edu 37 4 1018978 1018978 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001004356.2 +1 reviewed p.P453L 0.009 18 0% 15 53.3% 7 28.5% benign(0) tolerated(0.75) neutral(0.002) NULL SLBP 7884 genome.wustl.edu 37 4 1705398 1705398 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_006527.2 -1 reviewed p.R69H 0.523 431 0% 532 36.1% 27 29.6% benign(0.099) tolerated(0.25) neutral(0.044) NULL SH3TC1 54436 genome.wustl.edu 37 4 8228830 8228830 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_018986.3 +1 validated p.A470V 0.000 34 0% 26 26.9% 1 0% benign(0.042) tolerated(0.28) neutral(0.034) NULL KLF3 51274 genome.wustl.edu 37 4 38691425 38691425 + Missense_Mutation SNP G G T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_016531.5 +1 validated p.R207M 1.000 266 0% 302 36.4% 20 10% possibly_damaging(0.911) deleterious(0) deleterious(0.807) NULL LOC441016 441016 genome.wustl.edu 37 4 54442357 54442357 + Missense_Mutation SNP G G T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef XM_496693.4 +1 model p.D209Y 0.273 19 0% 13 30.8% 0 - - - - HMMPfam_HCaRG CLOCK 9575 genome.wustl.edu 37 4 56345859 56345859 + Missense_Mutation SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004898.2 -1 reviewed p.S19G 0.999 561 0% 792 29.2% 0 - benign(0) tolerated(0.94) - NULL LPHN3 23284 genome.wustl.edu 37 4 62845457 62845457 + Silent SNP C C G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000502815 +1 known p.L384V 1.000 178 0% 140 22.1% 0 - - - - HMMPfam_7tm_2,superfamily_Family A G protein-coupled receptor-like UGT2B15 7366 genome.wustl.edu 37 4 69536171 69536171 + Silent SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001076.2 -1 validated p.L56 0.817 177 0% 333 28.5% 0 - - - - HMMPfam_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase SEC31A 22872 genome.wustl.edu 37 4 83788367 83788367 + Missense_Mutation SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001077207.1 -1 reviewed p.S329G 1.000 282 0% 399 28.8% 28 0% benign(0.147) deleterious(0.02) neutral(0.396) HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40 MEPE 56955 genome.wustl.edu 37 4 88766590 88766590 + Missense_Mutation SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_020203.3 +1 validated p.H190Q 0.000 141 0% 169 36.1% 0 - possibly_damaging(0.574) tolerated(0.31) neutral(0.224) HMMPfam_Osteoregulin PKD2 5311 genome.wustl.edu 37 4 88967960 88967960 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_000297.2 +1 reviewed p.R496C 1.000 512 0% 636 27.2% 10 0% probably_damaging(0.999) deleterious(0.02) deleterious(0.873) HMMPfam_PKD_channel,superfamily_SSF81324 DAPP1 27071 genome.wustl.edu 37 4 100756887 100756888 + Frame_Shift_Ins INS - - CT novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_014395.2 +1 validated p.S74fs 1.000:1.000 - - - - - - - - - HMMPfam_SH2,HMMSmart_SM00252,superfamily_SH2 domain EXOSC9 5393 genome.wustl.edu 37 4 122731125 122731126 + Frame_Shift_Del DEL AT AT - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 AT AT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001034194.1 +1 validated p.Y204fs 0.451:0.982 - - - - - - - - - HMMPfam_RNase_PH_C,superfamily_3_ExoRNase INPP4B 8821 genome.wustl.edu 37 4 143129594 143129594 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001101669.1 -1 reviewed p.H352 0.911 437 0% 445 35.7% 1 0% - - - NULL FSTL5 56884 genome.wustl.edu 37 4 162841740 162841740 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_020116.3 -1 validated p.H75 1.000 189 0% 187 34.8% 0 - - - - superfamily_SSF100895 KLHL2 11275 genome.wustl.edu 37 4 166150052 166150052 + Missense_Mutation SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000421009 +1 known p.M26T 0.988 399 0% 474 23.2% 6 50% benign(0) tolerated(0.08) neutral(0.300) NULL MTNR1A 4543 genome.wustl.edu 37 4 187455454 187455454 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_005958.3 -1 reviewed p.V148M 0.317 194 0.5% 214 26.2% 0 - probably_damaging(0.962) tolerated(0.19) neutral(0.455) HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like FAT1 2195 genome.wustl.edu 37 4 187629099 187629099 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_005245.3 -1 reviewed p.R628Q 1.000 178 0% 165 26.7% 1 0% benign(0) tolerated(0.35) neutral(0.021) HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like BRD9 65980 genome.wustl.edu 37 5 876276 876276 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_023924.4 -1 validated p.D345 0.804 149 0% 125 24% 25 36% - - - NULL SLC6A19 340024 genome.wustl.edu 37 5 1222001 1222001 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001003841.2 +1 reviewed p.N629 0.672 106 0% 125 35.2% 0 - - - - HMMPfam_SNF C5orf38 153571 genome.wustl.edu 37 5 2752497 2752497 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_178569.2 +1 provisional p.R40H 0.819 20 0% 22 27.3% 0 - unknown(0) - - NULL ADAMTS16 170690 genome.wustl.edu 37 5 5303391 5303391 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_139056.2 +1 reviewed p.G934R 0.997 56 0% 33 42.4% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat ANKH 56172 genome.wustl.edu 37 5 14716827 14716827 + Missense_Mutation SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_054027.4 -1 reviewed p.F377L 1.000 194 0% 289 27.7% 15 0% possibly_damaging(0.882) tolerated(0.93) neutral(0.344) NULL PDZD2 23037 genome.wustl.edu 37 5 32087481 32087481 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_178140.2 +1 reviewed p.S1309 0.001 51 0% 74 32.4% 1 0% - - - NULL CCDC125 202243 genome.wustl.edu 37 5 68595926 68595926 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_176816.3 -1 validated p.L243 0.648 361 0% 425 29.9% 8 100% - - - NULL PAPD4 167153 genome.wustl.edu 37 5 78981027 78981027 + Nonsense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001114393.1 +1 validated p.W462* 1.000 278 0% 304 30.6% 17 17.6% - - - superfamily_PAP/OAS1 substrate-binding domain PCSK1 5122 genome.wustl.edu 37 5 95768621 95768621 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_000439.4 -1 reviewed p.G42 0.150 133 0% 116 29.3% 0 - - - - superfamily_Prot_inh_propept FBN2 2201 genome.wustl.edu 37 5 127710322 127710323 + Frame_Shift_Ins INS - - AC novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001999.3 -1 reviewed p.D699fs 0.309:1.000 - - - - - - - - - superfamily_TB module/8-cys domain,superfamily_Concanavalin A-like lectins/glucanases,superfamily_EGF/Laminin TGFBI 7045 genome.wustl.edu 37 5 135391469 135391469 + Missense_Mutation SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_000358.2 +1 reviewed p.T504N 1.000 113 0% 98 22.4% 69 0% benign(0.011) tolerated(0.11) neutral(0.272) superfamily_FAS1 domain FAM13B 51306 genome.wustl.edu 37 5 137342768 137342768 + Missense_Mutation SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_016603.2 -1 validated p.E253D 0.023 667 0% 827 25.3% 3 33.3% benign(0) tolerated(0.95) - NULL FAM53C 51307 genome.wustl.edu 37 5 137682562 137682562 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001135647.1 +1 validated p.R365W 0.921 69 0% 100 19% 8 37.5% probably_damaging(0.991) deleterious(0.01) deleterious(0.850) NULL KDM3B 51780 genome.wustl.edu 37 5 137763761 137763761 + Missense_Mutation SNP G G T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_016604.3 +1 validated p.G1580V 1.000 495 0% 653 28.8% 63 36.5% benign(0.408) tolerated(0.27) neutral(0.166) HMMSmart_SM00558,superfamily_Clavaminate synthase-like HSPA9 3313 genome.wustl.edu 37 5 137892255 137892255 + Silent SNP G G T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004134.6 -1 reviewed p.S616 1.000 294 0% 304 29.6% 149 41.6% unknown(0) - - HMMPfam_HSP70 MZB1 51237 genome.wustl.edu 37 5 138725493 138725493 + Frame_Shift_Del DEL G G - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_016459.3 -1 validated p.P18fs 0.628 - - - - - - - - - NULL PCDHA4 56144 genome.wustl.edu 37 5 140187491 140187491 + Missense_Mutation SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_018907.2 +1 reviewed p.P240Q 1.000 92 0% 116 22.4% 1 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like PCDHA5 56143 genome.wustl.edu 37 5 140201623 140201623 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_018908.2 +1 reviewed p.R88Q 0.945 116 0% 114 26.3% 0 - probably_damaging(0.991) deleterious(0) deleterious(0.889) HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like PCDHA11 56138 genome.wustl.edu 37 5 140250356 140250356 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_018902.3 +1 reviewed p.D556 0.982 63 0% 31 45.2% 0 - - - - HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like PCDHB7 56129 genome.wustl.edu 37 5 140553098 140553098 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_018940.2 +1 reviewed p.V228M 0.037 100 0% 87 42.5% 3 0% possibly_damaging(0.864) deleterious(0) deleterious(0.779) HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like PCDHB15 56121 genome.wustl.edu 37 5 140627399 140627399 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_018935.2 +1 reviewed p.Y751 0.978 145 0% 176 28.4% 3 0% - - - NULL PCDHGA3 56112 genome.wustl.edu 37 5 140725565 140725565 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_018916.3 +1 reviewed p.S655 0.018 63 0% 44 15.9% 1 0% - - - HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like SYNPO 11346 genome.wustl.edu 37 5 149998219 149998219 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000314840 +1 known p.A97V 0.000 52 0% 48 22.9% 0 - benign(0) tolerated(0.26) neutral(0.034) NULL TIMD4 91937 genome.wustl.edu 37 5 156349116 156349116 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_138379.2 -1 validated p.L336 0.230 301 0% 373 25.2% 0 - - - - NULL C1QTNF2 114898 genome.wustl.edu 37 5 159776715 159776715 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_031908.4 -1 validated p.G151 0.962 33 0% 29 24.1% 1 0% - - - HMMPfam_Collagen ODZ2 57451 genome.wustl.edu 37 5 167689338 167689338 + Missense_Mutation SNP G G T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001122679.1 +1 inferred p.K2607N 1.000 53 0% 40 15% 0 - possibly_damaging(0.846) tolerated(0.05) deleterious(0.670) NULL SLIT3 6586 genome.wustl.edu 37 5 168180912 168180912 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_003062.2 -1 validated p.V596M 0.581 109 0.9% 103 12.6% 11 18.1% benign(0.002) tolerated(0.1) neutral(0.286) HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_RNI-like DOCK2 1794 genome.wustl.edu 37 5 169506138 169506138 + Silent SNP G G T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004946.2 +1 validated p.S1718 0.813 106 0% 153 41.2% 11 0% - - - NULL UIMC1 51720 genome.wustl.edu 37 5 176335628 176335628 + Missense_Mutation SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_016290.3 -1 provisional p.C582R 1.000 203 0% 249 25.3% 27 48.1% probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL SLC34A1 6569 genome.wustl.edu 37 5 176825050 176825050 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_003052.4 +1 reviewed p.L561 1.000 109 0% 109 38.5% 0 - - - - NULL ADAMTS2 9509 genome.wustl.edu 37 5 178559304 178559304 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_014244.2 -1 reviewed p.I739 0.995 222 0.5% 238 33.2% 11 0% - - - HMMPfam_ADAM_spacer1 RUFY1 80230 genome.wustl.edu 37 5 179036467 179036467 + Missense_Mutation SNP T T A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_025158.3 +1 validated p.C692S 1.000 29 0% 28 14.3% 68 8.8% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_FYVE,HMMSmart_SM00064,superfamily_FYVE/PHD zinc finger IRF4 3662 genome.wustl.edu 37 6 394897 394897 + Missense_Mutation SNP G G T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_002460.2 +1 validated p.R98L 0.998 84 0% 87 29.9% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) "HMMPfam_IRF,HMMSmart_SM00348,superfamily_""Winged helix"" DNA-binding domain" BPHL 670 genome.wustl.edu 37 6 3140668 3140668 + Missense_Mutation SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004332.2 +1 reviewed p.I238T 0.881 140 0% 135 25.2% 45 22.2% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Abhydrolase_1,superfamily_alpha/beta-Hydrolases PSMG4 389362 genome.wustl.edu 37 6 3263988 3263988 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001128592.1 +1 validated p.R82H 1.000 110 0% 118 33.1% 41 36.5% probably_damaging(1) deleterious(0.01) deleterious(0.905) NULL TXNDC5 81567 genome.wustl.edu 37 6 7899812 7899812 + Silent SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_030810.2 -1 reviewed p.P172 0.000 129 0% 93 32.3% 77 28.5% - - - NULL RBM24 221662 genome.wustl.edu 37 6 17292140 17292140 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000503965 +1 known p.P132L 0.583 31 0% 17 47.1% 6 50% - - - NULL LRRC16A 55604 genome.wustl.edu 37 6 25619728 25619728 + Missense_Mutation SNP C C T rs192384666 by1000genomes TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_017640.5 +1 validated p.R1300W 0.084 224 0% 277 28.9% 26 30.7% benign(0) tolerated(0.13) neutral(0.253) NULL HIST1H2BD 3017 genome.wustl.edu 37 6 26158426 26158426 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_021063.2 +1 reviewed p.A10V 1.000 361 0% 377 22.8% 112 32.1% benign(0.132) tolerated(0.06) neutral(0.334) superfamily_Histone-fold HIST1H4I 8294 genome.wustl.edu 37 6 27107259 27107259 + Missense_Mutation SNP G G T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_003495.2 +1 reviewed p.V58L 1.000 114 0% 138 32.6% 4 25% benign(0.268) deleterious(0.01) neutral(0.434) HMMSmart_SM00417,HMMSmart_SM00803,HMMPfam_Histone,superfamily_Histone-fold HIST1H2AH 85235 genome.wustl.edu 37 6 27115271 27115272 + Frame_Shift_Del DEL GA GA - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 GA GA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_080596.1 +1 reviewed p.S123fs 1.000:1.000 - - - - - - - - - HMMSmart_SM00414,superfamily_Histone-fold ZNF187 7741 genome.wustl.edu 37 6 28244190 28244191 + Frame_Shift_Del DEL AC AC - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 AC AC Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_152736.4 +1 validated p.T120fs 0.000:0.000 - - - - - - - - - superfamily_C2H2 and C2HC zinc fingers DDR1 780 genome.wustl.edu 37 6 30865356 30865356 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_013994.2 +1 reviewed p.A739V 0.007 45 0% 38 34.2% 142 39.4% benign(0.008) tolerated(0.3) neutral(0.029) HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like) MSH5 4439 genome.wustl.edu 37 6 31721180 31721180 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_025259.5 +1 reviewed p.M322I 0.999 146 0.7% 196 31.1% 2 50% benign(0.256) tolerated(0.6) neutral(0.031) HMMPfam_MutS_III,HMMSmart_MUTSd,superfamily_DNA_repair_MutS_domIII HSPA1L 3305 genome.wustl.edu 37 6 31778370 31778370 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_005527.3 -1 reviewed p.R460 0.998 197 0% 198 35.4% 6 33.3% - - - HMMPfam_HSP70,superfamily_SSF100920 LRFN2 57497 genome.wustl.edu 37 6 40400259 40400259 + Frame_Shift_Del DEL T T - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_020737.1 -1 provisional p.K198fs 0.955 - - - - - - - - - HMMSmart_SM00369,superfamily_L domain-like CAPN11 11131 genome.wustl.edu 37 6 44145028 44145028 + Silent SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_007058.3 +1 reviewed p.D429 0.964 68 0% 65 26.2% 1 0% - - - HMMPfam_Calpain_III,HMMSmart_calpain_III,superfamily_Peptidase_C2 EFHC1 114327 genome.wustl.edu 37 6 52319011 52319011 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_018100.3 +1 reviewed p.R281Q 1.000 334 0% 368 32.3% 90 37.7% benign(0.127) tolerated(0.33) neutral(0.035) HMMSmart_SM00676,HMMPfam_DUF1126 EYS 346007 genome.wustl.edu 37 6 65300468 65300468 + Silent SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001142800.1 -1 reviewed p.I1764 0.000 130 0% 142 26.8% 0 - - - - superfamily_Concanavalin A-like lectins/glucanases FBXL4 26235 genome.wustl.edu 37 6 99374458 99374458 + Missense_Mutation SNP T T A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_012160.3 -1 reviewed p.Y136F 1.000 101 0% 153 19% 7 42.8% probably_damaging(0.997) deleterious(0.04) deleterious(0.815) NULL ALDH8A1 64577 genome.wustl.edu 37 6 135254073 135254073 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_022568.2 -1 reviewed p.T230 0.053 63 0% 47 27.7% 0 - - - - HMMPfam_Aldedh,superfamily_ALDH-like MAP7 9053 genome.wustl.edu 37 6 136710602 136710602 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_003980.3 -1 reviewed p.E100K 1.000 359 0% 370 30.3% 10 30% unknown(0) deleterious(0) - NULL KIAA1244 57221 genome.wustl.edu 37 6 138608314 138608315 + Frame_Shift_Del DEL CA CA - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 CA CA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_020340.4 +1 validated p.Q965fs 0.218:0.222 - - - - - - - - - NULL ARID1B 57492 genome.wustl.edu 37 6 157528378 157528378 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_017519.2 +1 validated p.L2017 1.000 144 0% 223 37.2% 29 37.9% - - - NULL TMEM181 57583 genome.wustl.edu 37 6 159010786 159010786 + Missense_Mutation SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_020823.1 +1 validated p.K292R 0.002 298 0% 333 36.9% 9 22.2% benign(0.059) tolerated(0.51) neutral(0.013) NULL TAGAP 117289 genome.wustl.edu 37 6 159457356 159457356 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_054114.3 -1 reviewed p.R567C 0.000 50 0% 32 50% 3 0% possibly_damaging(0.736) deleterious(0.04) deleterious(0.618) NULL WTAP 9589 genome.wustl.edu 37 6 160169389 160169389 + Missense_Mutation SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004906.3 +1 reviewed p.F147S 1.000 233 0% 364 38.7% 45 24.4% probably_damaging(1) deleterious(0.01) deleterious(0.905) NULL LPA 4018 genome.wustl.edu 37 6 160969563 160969563 + Missense_Mutation SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_005577.2 -1 reviewed p.V1701A 0.000 191 0% 179 27.4% 0 - probably_damaging(0.962) tolerated(0.26) neutral(0.439) superfamily_Kringle-like FAM20C 56975 genome.wustl.edu 37 7 195605 195605 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_020223.2 +1 validated p.A219 0.000 83 0% 63 36.5% 8 0% - - - NULL FAM20C 56975 genome.wustl.edu 37 7 299804 299804 + Missense_Mutation SNP T T G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_020223.2 +1 validated p.L538R 1.000 16 0% 15 33.3% 11 0% unknown(0) deleterious(0) - HMMPfam_DUF1193 INTS1 26173 genome.wustl.edu 37 7 1524821 1524821 + Silent SNP A A C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001080453.2 -1 validated p.T1058 0.005 142 0.7% 169 35.5% 25 40% - - - NULL CARD11 84433 genome.wustl.edu 37 7 2969648 2969648 + Missense_Mutation SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_032415.3 -1 validated p.I544T 0.921 78 0% 63 46% 2 0% benign(0.002) tolerated(0.08) neutral(0.300) NULL SDK1 221935 genome.wustl.edu 37 7 4002440 4002440 + Silent SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_152744.3 +1 validated p.N462 0.212 57 0% 76 35.5% 1 0% - - - HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin SDK1 221935 genome.wustl.edu 37 7 4050719 4050719 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_152744.3 +1 validated p.R751 1.000 56 0% 65 26.2% 1 0% - - - HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III PAPOLB 56903 genome.wustl.edu 37 7 4899793 4899793 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_020144.4 -1 validated p.S550N 0.427 144 0% 197 29.4% 0 - benign(0.025) tolerated(0.24) neutral(0.038) NULL FAM126A 84668 genome.wustl.edu 37 7 23030705 23030705 + Missense_Mutation SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_032581.3 -1 reviewed p.V9A 1.000 553 0% 608 23.2% 5 0% probably_damaging(0.971) deleterious(0) deleterious(0.857) HMMPfam_Hyccin HOXA7 3204 genome.wustl.edu 37 7 27195919 27195919 + Nonsense_Mutation SNP G G T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_006896.3 -1 reviewed p.C82* 0.998 28 0% 30 40% 0 - - - - NULL ANLN 54443 genome.wustl.edu 37 7 36464297 36464297 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000446635 +1 known p.C239Y 0.827 313 0% 382 35.1% 3 66.6% - - - NULL CDK13 8621 genome.wustl.edu 37 7 40027496 40027496 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_003718.4 +1 reviewed p.A504T 0.494 114 1.8% 158 31.6% 20 30% possibly_damaging(0.792) deleterious(0.03) deleterious(0.661) NULL TYW1 55253 genome.wustl.edu 37 7 66703327 66703327 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_018264.2 +1 validated p.I670 0.997 542 0.2% 659 23.4% 4 50% - - - NULL SEMA3D 223117 genome.wustl.edu 37 7 84629153 84629153 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_152754.2 -1 validated p.T646M 1.000 182 0% 183 35.5% 1 100% possibly_damaging(0.949) tolerated(0.15) deleterious(0.634) HMMSmart_IG,HMMPfam_V-set,superfamily_SSF48726 ABCB1 5243 genome.wustl.edu 37 7 87196106 87196106 + Silent SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_000927.3 -1 reviewed p.L175 0.987 293 0% 346 33.8% 4 0% - - - HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain SAMD9 54809 genome.wustl.edu 37 7 92731627 92731627 + Missense_Mutation SNP A A C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_017654.2 -1 validated p.F1262V 0.000 103 0% 86 39.5% 6 66.6% benign(0.006) tolerated(0.14) neutral(0.249) NULL TRRAP 8295 genome.wustl.edu 37 7 98497120 98497120 + Missense_Mutation SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_003496.2 +1 validated p.Q237K 1.000 502 0.6% 644 27% 3 66.6% unknown(0) deleterious(0) - superfamily_ARM repeat ZNF394 84124 genome.wustl.edu 37 7 99091517 99091517 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_032164.2 -1 provisional p.H441Y 0.128 302 0.3% 258 27.5% 25 36% benign(0) tolerated(0.34) neutral(0.023) NULL NAPEPLD 222236 genome.wustl.edu 37 7 102755565 102755565 + Missense_Mutation SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001122838.1 -1 validated p.D333G 1.000 532 0% 544 29.8% 3 66.6% probably_damaging(0.999) deleterious(0.01) deleterious(0.896) superfamily_SSF56281 LAMB1 3912 genome.wustl.edu 37 7 107618564 107618565 + Frame_Shift_Del DEL CA CA - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 CA CA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_002291.2 -1 reviewed p.C309fs 1.000:1.000 - - - - - - - - - HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,PatternScan_EGF_1,superfamily_EGF/Laminin FOXP2 93986 genome.wustl.edu 37 7 114270012 114270012 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_148898.2 +1 reviewed p.Q208 0.996 24 0% 73 34.2% 1 0% - - - NULL TES 26136 genome.wustl.edu 37 7 115889244 115889244 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_015641.2 +1 reviewed p.T95M 1.000 205 0% 258 34.9% 63 41.2% probably_damaging(0.99) deleterious(0.01) deleterious(0.847) HMMPfam_PET SPAM1 6677 genome.wustl.edu 37 7 123594428 123594428 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_003117.4 +1 reviewed p.Q268 0.000 208 0.5% 289 11.1% 0 - - - - HMMPfam_Glyco_hydro_56,superfamily_Glyco_hydro_cat MEST 4232 genome.wustl.edu 37 7 130138027 130138027 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_002402.2 +1 reviewed p.A129 0.009 192 0% 186 30.6% 45 37.7% - - - HMMPfam_Abhydrolase_1,superfamily_alpha/beta-Hydrolases PODXL 5420 genome.wustl.edu 37 7 131191403 131191403 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001018111.2 -1 reviewed p.C395Y 0.127 204 0% 220 27.7% 33 9% probably_damaging(0.998) deleterious(0) deleterious(0.919) HMMPfam_CD34_antigen PLXNA4 91584 genome.wustl.edu 37 7 131870086 131870086 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_020911.1 -1 validated p.R1044W 1.000 233 0% 209 28.7% 0 - probably_damaging(0.982) deleterious(0.01) deleterious(0.832) HMMPfam_TIG,HMMSmart_SM00429,superfamily_E set domains SLC13A4 26266 genome.wustl.edu 37 7 135368986 135368986 + Silent SNP G G T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_012450.2 -1 validated p.P543 0.235 143 0.7% 262 27.5% 3 66.6% - - - HMMPfam_Na_sulph_symp TRBV4-1 28617 genome.wustl.edu 37 7 142013390 142013390 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000390357 +1 known p.R82H 0.004 185 1.1% 270 25.9% 3 0% possibly_damaging(0.85) deleterious(0) deleterious(0.772) HMMPfam_V-set,superfamily_Immunoglobulin ZYX 7791 genome.wustl.edu 37 7 143079447 143079447 + Silent SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001010972.1 +1 reviewed p.P105 1.000 28 0% 30 23.3% 168 8.9% - - - NULL EPHA1 2041 genome.wustl.edu 37 7 143095948 143095948 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_005232.4 -1 reviewed p.R361H 0.924 58 0% 39 28.2% 9 55.5% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III CNTNAP2 26047 genome.wustl.edu 37 7 147964161 147964161 + Missense_Mutation SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_014141.5 +1 reviewed p.S1140G 0.510 536 0% 619 28.8% 0 - benign(0.001) tolerated(0.25) neutral(0.037) HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2 HTR5A 3361 genome.wustl.edu 37 7 154876043 154876043 + Missense_Mutation SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_024012.2 +1 reviewed p.I307T 1.000 383 0% 439 35.5% 0 - benign(0.015) tolerated(0.5) neutral(0.011) HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like RBM33 155435 genome.wustl.edu 37 7 155504005 155504005 + Missense_Mutation SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_053043.2 +1 validated p.P353T 1.000 87 1.1% 125 30.4% 3 0% unknown(0) deleterious(0.05) - NULL PTPRN2 5799 genome.wustl.edu 37 7 157475480 157475480 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_002847.3 -1 reviewed p.R646 0.651 173 0% 203 22.7% 3 0% - - - NULL ERICH1 157697 genome.wustl.edu 37 8 623731 623731 + Missense_Mutation SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_207332.1 -1 provisional p.E207D 0.000 96 0% 109 32.1% 7 28.5% possibly_damaging(0.649) tolerated(0.09) deleterious(0.524) NULL MTMR7 9108 genome.wustl.edu 37 8 17157434 17157434 + Silent SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004686.4 -1 reviewed p.H640 0.000 112 0% 117 24.8% 1 100% - - - NULL PIWIL2 55124 genome.wustl.edu 37 8 22146110 22146110 + Missense_Mutation SNP T T A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001135721.1 +1 validated p.I306N 1.000 368 0% 400 31.5% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) superfamily_PAZ domain SLC25A37 51312 genome.wustl.edu 37 8 23423645 23423645 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_016612.2 +1 provisional p.D79N 0.998 82 0% 88 25% 5 0% benign(0.016) tolerated(0.45) neutral(0.013) superfamily_Mitochondrial carrier,HMMPfam_Mito_carr FBXO16 157574 genome.wustl.edu 37 8 28314423 28314423 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_172366.2 -1 reviewed p.A123T 0.613 155 0% 210 35.7% 9 66.6% benign(0) tolerated(1) - HMMPfam_F-box,HMMSmart_FBOX,superfamily_SSF81383 GSR 2936 genome.wustl.edu 37 8 30541704 30541704 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_000637.2 -1 validated p.D352N 1.000 381 0% 438 36.5% 106 39.6% benign(0.172) tolerated(1) neutral(0.015) HMMPfam_Pyr_redox_2,superfamily_FAD/NAD(P)-binding domain KAT6A 7994 genome.wustl.edu 37 8 41790512 41790512 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001099412.1 -1 validated p.G1742 1.000 350 0.3% 385 32.2% 12 50% - - - NULL KAT6A 7994 genome.wustl.edu 37 8 41790636 41790636 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001099412.1 -1 validated p.P1701L 0.909 86 0% 91 37.4% 1 0% probably_damaging(0.998) deleterious(0.01) deleterious(0.880) NULL KIAA0146 23514 genome.wustl.edu 37 8 48320451 48320451 + Missense_Mutation SNP C C G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001080394.1 +1 predicted p.L269V 1.000 283 0% 392 32.4% 19 21% possibly_damaging(0.868) deleterious(0.02) deleterious(0.720) NULL PRDM14 63978 genome.wustl.edu 37 8 70981731 70981731 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_024504.2 -1 validated p.A122V 0.000 35 0% 33 39.4% 0 - benign(0.009) tolerated(0.15) neutral(0.241) NULL ZFHX4 79776 genome.wustl.edu 37 8 77763461 77763461 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_024721.4 +1 validated p.R1390H 1.000 82 0% 102 39.2% 0 - possibly_damaging(0.646) - - HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers RUNX1T1 862 genome.wustl.edu 37 8 92998418 92998418 + Missense_Mutation SNP C C G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_175634.1 -1 reviewed p.G405R 1.000 127 0% 107 31.8% 3 0% possibly_damaging(0.904) tolerated(0.31) neutral(0.386) NULL ESRP1 54845 genome.wustl.edu 37 8 95683864 95683864 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_017697.3 +1 validated p.R473C 1.000 248 0% 219 28.8% 33 36.3% probably_damaging(0.999) tolerated(0.06) deleterious(0.813) HMMSmart_SM00360,superfamily_RNA-binding domain RBD CSMD3 114788 genome.wustl.edu 37 8 113402991 113402991 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_198123.1 -1 validated p.R1946C 1.000 319 0% 361 33.8% 0 - probably_damaging(1) deleterious(0.03) deleterious(0.865) HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain TNFRSF11B 4982 genome.wustl.edu 37 8 119941025 119941025 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_002546.3 -1 reviewed p.D182N 1.000 520 0.2% 592 32.3% 2 0% probably_damaging(0.999) deleterious(0.03) deleterious(0.855) HMMSmart_SM00208 ZNF623 9831 genome.wustl.edu 37 8 144732159 144732159 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_014789.3 +1 validated p.T39 0.000 97 0% 119 31.9% 7 28.5% - - - NULL FOXH1 8928 genome.wustl.edu 37 8 145700372 145700372 + Missense_Mutation SNP G G T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_003923.2 -1 reviewed p.P116Q 0.935 12 0% 10 40% 0 - probably_damaging(0.998) deleterious(0) deleterious(0.919) HMMPfam_Fork_head,HMMSmart_FH,superfamily_SSF46785 KIAA2026 158358 genome.wustl.edu 37 9 5921511 5921511 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001017969.2 -1 validated p.A1495 0.051 241 0% 274 27% 10 10% - - - NULL RECK 8434 genome.wustl.edu 37 9 36110070 36110070 + Missense_Mutation SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_021111.2 +1 reviewed p.F628L 1.000 253 0% 315 33.3% 4 0% benign(0.001) tolerated(0.2) neutral(0.049) superfamily_Kazal-type serine protease inhibitors SHB 6461 genome.wustl.edu 37 9 37948720 37948720 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_003028.2 -1 validated p.A420T 0.995 91 0% 85 22.4% 34 23.5% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_SH2,HMMSmart_SM00252,superfamily_SH2 domain C9orf57 138240 genome.wustl.edu 37 9 74667321 74667321 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001128618.1 -1 validated p.C126Y 1.000 337 0% 326 33.1% 0 - possibly_damaging(0.819) - - NULL TLE1 7088 genome.wustl.edu 37 9 84202674 84202674 + Silent SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_005077.3 -1 provisional p.T633 0.630 175 0% 161 34.2% 49 32.6% - - - HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40 NTRK2 4915 genome.wustl.edu 37 9 87570325 87570325 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_006180.3 +1 reviewed p.V689M 1.000 76 0% 80 35% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_TYR,superfamily_Kinase_like PTCH1 5727 genome.wustl.edu 37 9 98224138 98224138 + Missense_Mutation SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_000264.3 -1 reviewed p.Q901H 1.000 146 0% 169 34.3% 23 60.8% probably_damaging(0.991) tolerated(0.13) deleterious(0.697) HMMPfam_Patched ZNF189 7743 genome.wustl.edu 37 9 104171915 104171915 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_003452.2 +1 validated p.T622I 0.990 108 0% 135 29.6% 16 12.5% benign(0) tolerated(0.08) neutral(0.300) superfamily_C2H2 and C2HC zinc fingers PBX3 5090 genome.wustl.edu 37 9 128724473 128724473 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_006195.5 +1 validated p.G368R 1.000 271 0% 275 37.1% 2 0% probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL GARNL3 84253 genome.wustl.edu 37 9 130147340 130147340 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_032293.4 +1 validated p.T768 0.633 111 0.9% 84 36.9% 5 0% - - - HMMPfam_CNH,HMMSmart_SM00036 SLC2A8 29988 genome.wustl.edu 37 9 130164873 130164873 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000419132 +1 known p.A98V 1.000 26 0% 16 37.5% 19 26.3% - - - HMMPfam_Sugar_tr,superfamily_MFS general substrate transporter SPTAN1 6709 genome.wustl.edu 37 9 131331071 131331071 + Silent SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001130438.1 +1 validated p.Q86 0.957 145 0% 199 26.6% 37 21.6% - - - HMMPfam_Spectrin,HMMSmart_SPEC,superfamily_Spectrin RAPGEF1 2889 genome.wustl.edu 37 9 134526254 134526254 + Silent SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_198679.1 -1 reviewed p.S49 0.849 738 0% 843 27.6% 3 33.3% - - - NULL CEL 1056 genome.wustl.edu 37 9 135939901 135939901 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001807.3 +1 reviewed p.T62 0.063 162 0% 184 29.3% 39 41% - - - HMMPfam_COesterase,superfamily_alpha/beta-Hydrolases PTGDS 5730 genome.wustl.edu 37 9 139875307 139875307 + Nonstop_Mutation SNP G G T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_000954.5 +1 reviewed p.*191Y 0.986 122 0% 112 26.8% 289 0.3% - - - NULL TPRN 286262 genome.wustl.edu 37 9 140087025 140087027 + In_Frame_Del DEL TCC TCC - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 TCC TCC Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_173691.3 -1 validated p.E557in_frame_del 0.745:0.829:0.911 - - - - - - - - - NULL COBRA1 25920 genome.wustl.edu 37 9 140157577 140157577 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_015456.3 +1 validated p.T229M 1.000 107 0.9% 117 37.6% 84 29.7% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_COBRA1 SFMBT2 57713 genome.wustl.edu 37 10 7262396 7262396 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001029880.1 -1 provisional p.R436Q 0.441 277 0% 301 28.9% 0 - probably_damaging(0.976) tolerated(0.33) neutral(0.442) HMMPfam_MBT,HMMSmart_SM00561,superfamily_Tudor/PWWP/MBT USP6NL 9712 genome.wustl.edu 37 10 11505297 11505297 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001080491.2 -1 validated p.R561W 1.000 54 0% 52 34.6% 11 18.1% probably_damaging(1) deleterious(0) deleterious(0.945) NULL DHTKD1 55526 genome.wustl.edu 37 10 12136161 12136161 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_018706.5 +1 validated p.R417C 1.000 247 0.4% 255 29.8% 9 11.1% probably_damaging(0.998) deleterious(0) deleterious(0.919) HMMPfam_E1_dh,superfamily_Thiamin diphosphate-binding fold (THDP-binding) CAMK1D 57118 genome.wustl.edu 37 10 12858303 12858303 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_153498.2 +1 reviewed p.C270Y 1.000 123 0% 176 34.1% 4 0% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase RPP38 10557 genome.wustl.edu 37 10 15145393 15145393 + Missense_Mutation SNP A A T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001097590.1 +1 validated p.N27I 1.000 87 0% 125 37.6% 31 45.1% probably_damaging(0.999) deleterious(0.01) deleterious(0.896) NULL ARMC3 219681 genome.wustl.edu 37 10 23248346 23248346 + Missense_Mutation SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_173081.3 +1 validated p.E127G 1.000 97 0% 137 13.9% 56 48.2% probably_damaging(1) deleterious(0.03) deleterious(0.865) HMMSmart_SM00185,superfamily_ARM repeat KIAA1217 56243 genome.wustl.edu 37 10 24816898 24816898 + Missense_Mutation SNP A A C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_019590.3 +1 validated p.N978H 1.000 275 0.4% 462 26.4% 26 53.8% probably_damaging(0.999) deleterious(0.01) deleterious(0.896) NULL KIAA1217 56243 genome.wustl.edu 37 10 24817012 24817012 + Silent SNP A A C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_019590.3 +1 validated p.R1016 0.292 100 0% 133 23.3% 20 40% - - - NULL KIAA1217 56243 genome.wustl.edu 37 10 24832087 24832087 + Silent SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_019590.3 +1 validated p.T1296 0.337 86 0% 102 30.4% 33 42.4% - - - NULL GPR158 57512 genome.wustl.edu 37 10 25465030 25465030 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_020752.2 +1 validated p.R227 1.000 29 0% 19 52.6% 0 - - - - NULL APBB1IP 54518 genome.wustl.edu 37 10 26856408 26856408 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000445780 +1 known p.R608C 0.800 39 0% 64 26.6% 14 0% unknown(0) - - NULL MTPAP 55149 genome.wustl.edu 37 10 30629364 30629364 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_018109.3 -1 validated p.V116I 0.881 155 0% 196 18.4% 10 20% benign(0.33) deleterious(0) deleterious(0.548) NULL ANKRD30A 91074 genome.wustl.edu 37 10 37508239 37508239 + Missense_Mutation SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_052997.2 +1 validated p.P1144H 0.124 73 0% 134 36.6% 0 - probably_damaging(0.984) deleterious(0.01) deleterious(0.836) NULL BMS1 9790 genome.wustl.edu 37 10 43297586 43297586 + Missense_Mutation SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_014753.3 +1 reviewed p.V750A 1.000 271 0% 416 25.5% 8 12.5% probably_damaging(0.988) tolerated(0.25) deleterious(0.474) superfamily_P-loop containing nucleoside triphosphate hydrolases ZNF32 7580 genome.wustl.edu 37 10 44141556 44141556 + Frame_Shift_Del DEL A A - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001005368.1 -1 validated p.L9fs 1.000 - - - - - - - - - NULL BICC1 80114 genome.wustl.edu 37 10 60549561 60549561 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001080512.1 +1 reviewed p.S305 1.000 278 0% 361 26.3% 2 0% - - - HMMSmart_SM00322,HMMPfam_KH_1,superfamily_Eukaryotic type KH-domain (KH-domain type I) ARID5B 84159 genome.wustl.edu 37 10 63845592 63845607 + Frame_Shift_Del DEL TCAAACATGAAATACC TCAAACATGAAATACC - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 TCAAACATGAAATACC TCAAACATGAAATACC Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_032199.2 +1 validated p.H446fs 1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.999:1.000:1.000:1.000:1.000:1.000:0.994:0.986:0.961 - - - - - - - - - NULL H2AFY2 55506 genome.wustl.edu 37 10 71860048 71860048 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_018649.2 +1 validated p.A258V 0.996 105 0% 179 32.4% 104 33.6% probably_damaging(0.984) deleterious(0.01) deleterious(0.836) HMMPfam_Macro,superfamily_SSF52949 PTEN 5728 genome.wustl.edu 37 10 89720749 89720749 + Frame_Shift_Del DEL C C - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000371953 +1 known p.I300fs 1.000 - - - - - - - - - superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_PTEN_C2 KIF20B 9585 genome.wustl.edu 37 10 91469149 91469149 + Silent SNP T T G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_016195.2 +1 validated p.P94 0.866 294 0.3% 366 32% 1 100% - - - HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases MARCH5 54708 genome.wustl.edu 37 10 94109562 94109562 + Missense_Mutation SNP A A T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_017824.4 +1 validated p.S230C 1.000 295 0% 367 32.4% 39 33.3% probably_damaging(0.995) deleterious(0.01) deleterious(0.863) NULL LOXL4 84171 genome.wustl.edu 37 10 100010926 100010926 + Missense_Mutation SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_032211.6 -1 reviewed p.V699A 1.000 133 0% 129 26.4% 3 0% possibly_damaging(0.678) deleterious(0) deleterious(0.686) HMMPfam_Lysyl_oxidase PITX3 5309 genome.wustl.edu 37 10 103990448 103990448 + Silent SNP G G C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_005029.3 -1 reviewed p.A244 0.329 18 0% 22 22.7% 0 - - - - NULL GBF1 8729 genome.wustl.edu 37 10 104135324 104135324 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004193.1 +1 provisional p.A1289V 0.773 86 0% 73 27.4% 40 25% benign(0) tolerated(0.61) neutral(0.004) NULL CUEDC2 79004 genome.wustl.edu 37 10 104183256 104183256 + Missense_Mutation SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_024040.2 -1 validated p.R264L 1.000 231 0% 305 32.1% 105 33.3% probably_damaging(0.986) deleterious(0.01) deleterious(0.840) NULL CYP17A1 1586 genome.wustl.edu 37 10 104595135 104595135 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_000102.3 -1 reviewed p.I104 0.953 134 0% 91 24.2% 0 - - - - HMMPfam_p450,superfamily_Cytochrome P450 INA 9118 genome.wustl.edu 37 10 105048271 105048273 + In_Frame_Del DEL GAG GAG - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 GAG GAG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_032727.3 +1 reviewed p.E452in_frame_del 1.000:1.000:1.000 - - - - - - - - - NULL ITPRIP 85450 genome.wustl.edu 37 10 106075011 106075011 + Missense_Mutation SNP G G T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_033397.2 -1 provisional p.L267M 1.000 40 0% 24 29.2% 6 16.6% probably_damaging(1) tolerated(0.07) deleterious(0.819) NULL INPP5F 22876 genome.wustl.edu 37 10 121586603 121586603 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_014937.2 +1 reviewed p.R904W 1.000 166 0.6% 202 31.7% 5 0% probably_damaging(1) deleterious(0) deleterious(0.945) NULL TUBGCP2 10844 genome.wustl.edu 37 10 135101667 135101667 + Frame_Shift_Del DEL G G - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_006659.2 -1 validated p.T563fs 1.000 - - - - - - - - - HMMPfam_Spc97_Spc98 PHRF1 57661 genome.wustl.edu 37 11 606568 606568 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_020901.2 +1 validated p.R526 0.014 21 0% 11 36.4% 14 42.8% - - - NULL AP2A2 161 genome.wustl.edu 37 11 993936 993936 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_012305.2 +1 validated p.R578H 1.000 45 0% 29 41.4% 73 41% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Adaptin_N,superfamily_ARM repeat IGF2-AS1 51214 genome.wustl.edu 37 11 2167602 2167602 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000381361 +1 known p.G144 0.000 85 0% 82 26.8% 1 0% - - - NULL OR52A5 390054 genome.wustl.edu 37 11 5153839 5153840 + Frame_Shift_Ins INS - - G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001005160.2 -1 validated p.S11fs 0.127:0.132 - - - - - - - - - superfamily_SSF81321 OR2D3 120775 genome.wustl.edu 37 11 6942409 6942409 + Missense_Mutation SNP G G C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001004684.1 +1 provisional p.Q59H 0.077 349 0% 321 27.4% 0 - benign(0.004) tolerated(0.54) neutral(0.007) HMMPfam_7tm_1,superfamily_SSF81321 TUB 7275 genome.wustl.edu 37 11 8118337 8118337 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_003320.4 +1 reviewed p.S279N 1.000 109 0% 105 29.5% 1 0% probably_damaging(1) tolerated(0.53) deleterious(0.507) NULL ST5 6764 genome.wustl.edu 37 11 8732677 8732678 + Frame_Shift_Del DEL CT CT - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 CT CT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_005418.3 -1 reviewed p.E758fs 0.979:1.000 - - - - - - - - - HMMPfam_uDENN,HMMSmart_SM00800 IGSF22 283284 genome.wustl.edu 37 11 18731225 18731225 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_173588.3 -1 validated p.P802S 1.000 66 0% 38 36.8% 0 - probably_damaging(0.998) tolerated(0.13) deleterious(0.727) HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like C11orf41 25758 genome.wustl.edu 37 11 33604925 33604925 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_012194.1 +1 validated p.A1191T 1.000 139 0% 121 38.8% 0 - probably_damaging(1) deleterious(0.01) deleterious(0.905) NULL NAT10 55226 genome.wustl.edu 37 11 34139806 34139806 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_024662.2 +1 validated p.V213I 0.001 174 0% 199 34.2% 10 50% benign(0) tolerated(0.67) neutral(0.003) NULL ABTB2 25841 genome.wustl.edu 37 11 34173941 34173941 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_145804.1 -1 provisional p.R838Q 1.000 20 0% 13 38.5% 3 33.3% probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL OR4A47 403253 genome.wustl.edu 37 11 48510665 48510665 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001005512.2 +1 validated p.G107 0.004 219 0% 293 25.3% 0 - - - - HMMPfam_7tm_1,superfamily_SSF81321 FAM111B 374393 genome.wustl.edu 37 11 58892887 58892887 + Silent SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_198947.3 +1 validated p.G439 0.036 146 0% 169 34.3% 1 100% - - - superfamily_Trypsin-like serine proteases SLC22A25 387601 genome.wustl.edu 37 11 62931534 62931534 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_199352.3 -1 validated p.T469I 0.000 176 0% 211 28% 0 - benign(0.001) tolerated(0.39) neutral(0.016) HMMPfam_MFS_1,superfamily_MFS general substrate transporter SLC22A11 55867 genome.wustl.edu 37 11 64329795 64329795 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_018484.2 +1 reviewed p.A237T 0.000 37 0% 22 45.5% 0 - benign(0.005) tolerated(0.13) neutral(0.253) HMMPfam_MFS_1,superfamily_MFS general substrate transporter CCDC87 55231 genome.wustl.edu 37 11 66360143 66360143 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_018219.2 -1 validated p.R115Q 0.994 43 0% 35 48.6% 0 - probably_damaging(0.999) tolerated(0.17) deleterious(0.549) NULL CARNS1 57571 genome.wustl.edu 37 11 67191964 67191964 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_020811.1 +1 validated p.A792 0.839 25 0% 20 30% 4 75% - - - superfamily_Glutathione synthetase ATP-binding domain-like GPR152 390212 genome.wustl.edu 37 11 67219093 67219093 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_206997.1 -1 validated p.S368L 0.000 89 0% 70 31.4% 1 100% benign(0) tolerated(1) - NULL CCND1 595 genome.wustl.edu 37 11 69466019 69466019 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_053056.2 +1 reviewed p.T286I 1.000 13 0% 17 35.3% 38 47.3% probably_damaging(1) deleterious(0) deleterious(0.945) NULL ARAP1 116985 genome.wustl.edu 37 11 72437837 72437837 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001040118.2 -1 reviewed p.A113T 0.000 26 0% 30 33.3% 0 - benign(0) tolerated(0.14) neutral(0.249) NULL PGM2L1 283209 genome.wustl.edu 37 11 74056662 74056662 + Missense_Mutation SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_173582.3 -1 validated p.L357S 0.998 396 0% 569 25.3% 3 33.3% benign(0.416) deleterious(0) deleterious(0.579) superfamily_Phosphoglucomutase first 3 domains KCTD14 65987 genome.wustl.edu 37 11 77727840 77727840 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_023930.3 -1 validated p.L189 1.000 184 0% 218 32.1% 12 16.6% - - - NULL SESN3 143686 genome.wustl.edu 37 11 94923096 94923099 + Frame_Shift_Del DEL TAAG TAAG - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 TAAG TAAG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_144665.2 -1 provisional p.Y123fs 1.000:1.000:0.822:0.988 - - - - - - - - - HMMPfam_PA26 DIXDC1 85458 genome.wustl.edu 37 11 111865796 111865796 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001037954.2 +1 validated p.R497Q 0.013 128 0% 195 29.2% 20 5% - - - NULL IL10RA 3587 genome.wustl.edu 37 11 117869601 117869601 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001558.3 +1 reviewed p.L328 1.000 96 0% 116 25.9% 9 0% - - - NULL HMBS 3145 genome.wustl.edu 37 11 118963199 118963199 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_000190.3 +1 reviewed p.R246H 1.000 117 0% 75 25.3% 26 26.9% possibly_damaging(0.917) deleterious(0) deleterious(0.812) HMMPfam_Porphobil_deamC,superfamily_Porphobilinogen deaminase (hydroxymethylbilane synthase) C-terminal domain HINFP 25988 genome.wustl.edu 37 11 119003827 119003827 + Missense_Mutation SNP A A C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_015517.3 +1 validated p.K346T 1.000 132 0% 145 22.8% 17 35.2% possibly_damaging(0.553) tolerated(0.54) neutral(0.196) HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,superfamily_SSF57667 CBL 867 genome.wustl.edu 37 11 119170319 119170319 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_005188.2 +1 reviewed p.A850V 0.000 106 0% 127 44.1% 2 50% benign(0.086) deleterious(0.05) neutral(0.352) NULL SNORD14D 85390 genome.wustl.edu 37 11 122929542 122929542 + RNA SNP G G C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NR_001454.2 -1 provisional NULL 0.002 142 0% 157 33.8% 3 0% - - - - KDM5A 5927 genome.wustl.edu 37 12 432362 432362 + Missense_Mutation SNP G G T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001042603.1 -1 reviewed p.P721T 1.000 74 0% 115 28.7% 4 0% benign(0) tolerated(1) - HMMPfam_zf-C5HC2 NCAPD2 9918 genome.wustl.edu 37 12 6619866 6619866 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_014865.3 +1 validated p.A112T 0.888 208 0% 272 32.7% 10 60% benign(0.056) tolerated(0.67) neutral(0.006) NULL LAG3 3902 genome.wustl.edu 37 12 6886966 6886966 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_002286.5 +1 reviewed p.R437H 0.000 131 0% 149 10.1% 14 0% probably_damaging(0.998) tolerated(0.05) deleterious(0.820) NULL GUCY2C 2984 genome.wustl.edu 37 12 14772224 14772224 + Silent SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004963.3 -1 validated p.V932 0.942 204 0% 237 16.9% 8 37.5% - - - HMMPfam_Guanylate_cyc,HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain,PatternScan_GUANYLATE_CYCLASE_1 KLHDC5 57542 genome.wustl.edu 37 12 27944687 27944687 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_020782.1 +1 validated p.G307R 1.000 265 0% 276 30.4% 10 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain ZCRB1 85437 genome.wustl.edu 37 12 42711698 42711698 + Missense_Mutation SNP A A T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_033114.3 -1 reviewed p.V39D 1.000 205 0% 235 35.3% 83 34.9% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_RRM_1,HMMSmart_RRM,superfamily_SSF54928 TMEM117 84216 genome.wustl.edu 37 12 44238578 44238578 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_032256.1 +1 provisional p.A42T 1.000 487 0% 482 25.5% 3 66.6% probably_damaging(0.998) tolerated(0.09) deleterious(0.771) NULL CCNT1 904 genome.wustl.edu 37 12 49087433 49087434 + In_Frame_Ins INS - - ATG novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001240.2 -1 reviewed p.521in_frame_insH 1.000:0.817 - - - - - - - - - NULL FAM186B 84070 genome.wustl.edu 37 12 49993459 49993459 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_032130.2 -1 validated p.A655V 0.000 105 0% 114 28.1% 2 0% benign(0.001) tolerated(0.5) neutral(0.010) NULL KRT6C 286887 genome.wustl.edu 37 12 52867004 52867006 + In_Frame_Del DEL TTG TTG - rs58401785 TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 TTG TTG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_173086.4 -1 reviewed p.N172in_frame_del 1.000:1.000:1.000 - - - - - - - - - HMMPfam_Filament ITGA5 3678 genome.wustl.edu 37 12 54803020 54803020 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_002205.2 -1 reviewed p.R193 1.000 118 0% 102 20.6% 10 0% - - - superfamily_SSF69318 TIMELESS 8914 genome.wustl.edu 37 12 56816656 56816656 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_003920.3 -1 validated p.E805K 0.999 179 0% 181 34.8% 10 60% benign(0.245) tolerated(0.59) neutral(0.030) HMMPfam_TIMELESS_C BAZ2A 11176 genome.wustl.edu 37 12 56994977 56994977 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_013449.3 -1 validated p.Q1429 1.000 196 0.5% 223 29.6% 17 23.5% - - - NULL TMEM194A 23306 genome.wustl.edu 37 12 57464673 57464673 + Nonsense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001130963.1 -1 validated p.R86* 0.996 144 0% 133 30.8% 2 0% - - - NULL KIF5A 3798 genome.wustl.edu 37 12 57944175 57944175 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004984.2 +1 reviewed p.V41I 1.000 52 0% 58 29.3% 0 - benign(0) tolerated(0.21) neutral(0.044) HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases AGAP2 116986 genome.wustl.edu 37 12 58125612 58125612 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001122772.1 -1 validated p.R645C 1.000 53 0% 56 41.1% 3 0% probably_damaging(1) deleterious(0.01) deleterious(0.905) NULL TSPAN31 6302 genome.wustl.edu 37 12 58139530 58139530 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_005981.3 +1 reviewed p.L22 1.000 438 0% 445 27.9% 19 10.5% - - - HMMPfam_Tetraspannin USP15 9958 genome.wustl.edu 37 12 62786931 62786932 + Frame_Shift_Del DEL AC AC - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 AC AC Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_006313.1 +1 provisional p.Y811fs 1.000:1.000 - - - - - - - - - HMMPfam_UCH,superfamily_SSF54001 AVPR1A 552 genome.wustl.edu 37 12 63544126 63544126 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_000706.3 -1 reviewed p.A164V 1.000 40 0% 19 47.4% 6 0% benign(0.064) tolerated(0.06) neutral(0.327) HMMPfam_7tm_1,superfamily_SSF81321 ENSG00000246966 0 genome.wustl.edu 37 12 70931917 70931917 + RNA SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000501222 +1 known NULL 0.000 247 0% 280 29.6% 0 - - - - - CEP290 80184 genome.wustl.edu 37 12 88496784 88496784 + Missense_Mutation SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_025114.3 -1 reviewed p.M941T 0.999 138 0% 152 24.3% 3 0% benign(0.001) tolerated(0.98) - NULL STAB2 55576 genome.wustl.edu 37 12 104084218 104084218 + Missense_Mutation SNP G G T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_017564.9 +1 reviewed p.G1067C 0.987 356 0% 428 32.5% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Fasciclin,HMMSmart_FAS1,superfamily_BIgH3_FAS1 ACACB 32 genome.wustl.edu 37 12 109625926 109625926 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001093.3 +1 reviewed p.G701 0.782 208 0% 191 28.3% 1 0% - - - HMMPfam_Biotin_carb_C,superfamily_Rudiment single hybrid motif ACACB 32 genome.wustl.edu 37 12 109675151 109675151 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001093.3 +1 reviewed p.R1543H 1.000 194 0% 204 36.3% 1 0% possibly_damaging(0.797) deleterious(0) deleterious(0.744) HMMPfam_ACC_central GLTP 51228 genome.wustl.edu 37 12 110295443 110295443 + Missense_Mutation SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_016433.3 -1 reviewed p.T62A 1.000 260 0% 327 13.8% 63 9.5% benign(0.014) deleterious(0.02) neutral(0.384) HMMPfam_GLTP,superfamily_Glycolipid transfer protein GLTP SLC24A6 80024 genome.wustl.edu 37 12 113737756 113737756 + Silent SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_024959.2 -1 validated p.V527 0.998 62 0% 53 47.2% 18 22.2% - - - HMMPfam_Na_Ca_ex CCDC64 92558 genome.wustl.edu 37 12 120518739 120518739 + Nonsense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_207311.2 +1 validated p.R453* 1.000 149 0% 186 20.4% 5 0% - - - NULL EP400 57634 genome.wustl.edu 37 12 132471209 132471209 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_015409.3 +1 validated p.A693T 0.805 182 0% 190 31.6% 3 33.3% unknown(0) - - NULL CHFR 55743 genome.wustl.edu 37 12 133434124 133434124 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_018223.2 -1 validated p.T282 0.980 92 0% 98 18.4% 12 16.6% - - - HMMSmart_SM00184,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_RING/U-box PSPC1 55269 genome.wustl.edu 37 13 20279934 20279934 + Silent SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001042414.1 -1 validated p.P418 1.000 429 0.2% 493 16% 71 32.3% - - - NULL SACS 26278 genome.wustl.edu 37 13 23907759 23907759 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_014363.4 -1 reviewed p.R3419H 1.000 172 0% 174 36.2% 1 0% possibly_damaging(0.895) deleterious(0.03) deleterious(0.718) NULL SPATA13 221178 genome.wustl.edu 37 13 24871623 24871623 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000424834 +1 known p.Q1149* 1.000 141 0% 179 28.5% 4 25% - - - HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like FAM123A 219287 genome.wustl.edu 37 13 25744772 25744772 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_152704.2 -1 validated p.T329M 0.388 30 0% 35 31.4% 0 - probably_damaging(1) deleterious(0.03) deleterious(0.865) HMMPfam_WTX LNX2 222484 genome.wustl.edu 37 13 28127466 28127466 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_153371.3 -1 validated p.L553F 0.971 153 0% 123 25.2% 5 60% probably_damaging(0.98) deleterious(0.05) deleterious(0.769) HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ SLC7A1 6541 genome.wustl.edu 37 13 30088675 30088675 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_003045.4 -1 validated p.A611V 1.000 40 0% 31 19.4% 6 33.3% possibly_damaging(0.897) tolerated(0.31) neutral(0.381) NULL DCLK1 9201 genome.wustl.edu 37 13 36686146 36686146 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004734.3 -1 validated p.V195M 1.000 166 0% 153 36.6% 1 0% benign(0.253) deleterious(0.02) neutral(0.409) HMMSmart_DCX,superfamily_SSF89837 CCNA1 8900 genome.wustl.edu 37 13 37012830 37012830 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_003914.3 +1 reviewed p.T240M 1.000 233 0.4% 343 16% 63 12.6% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Cyclin_N,superfamily_Cyclin-like FREM2 341640 genome.wustl.edu 37 13 39264281 39264281 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_207361.4 +1 reviewed p.R934W 0.942 66 0% 65 27.7% 0 - probably_damaging(0.982) deleterious(0.03) deleterious(0.791) NULL FOXO1 2308 genome.wustl.edu 37 13 41134406 41134406 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_002015.3 -1 reviewed p.A408T 1.000 157 0% 234 29.9% 11 0% benign(0) tolerated(0.98) - NULL ELF1 1997 genome.wustl.edu 37 13 41508071 41508072 + Frame_Shift_Del DEL TG TG - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 TG TG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_172373.3 -1 reviewed p.T450fs 1.000:1.000 - - - - - - - - - NULL KIAA0564 23078 genome.wustl.edu 37 13 42306245 42306245 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_015058.1 -1 validated p.G825R 1.000 264 0% 305 24.6% 12 25% probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_SM00382,HMMPfam_AAA_5,superfamily_P-loop containing nucleoside triphosphate hydrolases TSC22D1 8848 genome.wustl.edu 37 13 45148708 45148708 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_183422.2 -1 validated p.Q501 0.000 53 0% 51 37.3% 18 44.4% - - - NULL FAM194B 220081 genome.wustl.edu 37 13 46115775 46115775 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_182542.2 -1 predicted p.T638I 0.000 483 0.2% 489 23.7% 0 - benign(0.01) tolerated(0.1) neutral(0.287) NULL ENSG00000247181 0 genome.wustl.edu 37 13 76100787 76100787 + RNA SNP G G T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000499458 +1 known NULL 0.000 268 0% 226 31.4% 0 - - - - - LMO7 4008 genome.wustl.edu 37 13 76395591 76395591 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_015842.2 +1 reviewed p.R596H 0.255 173 0% 173 24.3% 21 47.6% benign(0.001) tolerated(0.59) neutral(0.004) NULL DOCK9 23348 genome.wustl.edu 37 13 99489817 99489817 + Silent SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000450257 -1 known p.K89R 1.000 206 0% 310 24.8% 10 30% - - - NULL NALCN 259232 genome.wustl.edu 37 13 101736067 101736067 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_052867.2 -1 validated p.R1193H 1.000 199 0% 189 34.4% 1 0% probably_damaging(0.956) deleterious(0.01) deleterious(0.805) NULL GRK1 6011 genome.wustl.edu 37 13 114438067 114438067 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000335678 +1 known p.D475N 1.000 93 0% 78 30.8% 0 - probably_damaging(0.997) deleterious(0.01) deleterious(0.872) HMMSmart_S_TK_X,superfamily_Kinase_like NDRG2 57447 genome.wustl.edu 37 14 21490570 21490570 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_201535.1 -1 reviewed p.Y68 1.000 426 0% 451 27.5% 108 21.2% - - - HMMPfam_Ndr,superfamily_alpha/beta-Hydrolases MYH6 4624 genome.wustl.edu 37 14 23862174 23862174 + Missense_Mutation SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_002471.3 -1 validated p.E1066D 1.000 367 0% 436 29.1% 0 - probably_damaging(0.983) deleterious(0.04) deleterious(0.778) superfamily_Prefoldin RNF31 55072 genome.wustl.edu 37 14 24627149 24627149 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_017999.4 +1 validated p.G924S 1.000 133 0% 154 29.9% 67 43.2% possibly_damaging(0.919) deleterious(0.03) deleterious(0.734) HMMSmart_SM00647 TGM1 7051 genome.wustl.edu 37 14 24729227 24729227 + Missense_Mutation SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_000359.2 -1 reviewed p.Q265H 1.000 69 0% 107 29.9% 0 - benign(0) deleterious(0.03) neutral(0.364) superfamily_SSF54001 RIPK3 11035 genome.wustl.edu 37 14 24808368 24808368 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_006871.3 -1 reviewed p.S108 0.024 82 0% 67 28.4% 8 37.5% - - - HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase ARHGAP5 394 genome.wustl.edu 37 14 32560800 32560800 + Frame_Shift_Del DEL T T - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001030055.1 +1 reviewed p.L309fs 1.000 - - - - - - - - - HMMPfam_FF,HMMSmart_SM00441 AKAP6 9472 genome.wustl.edu 37 14 33014801 33014801 + Silent SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004274.4 +1 reviewed p.A314 0.007 104 1% 128 28.1% 0 - - - - NULL FAM179B 23116 genome.wustl.edu 37 14 45433542 45433542 + Missense_Mutation SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_015091.2 +1 validated p.Y640H 0.998 131 0% 191 28.3% 3 0% benign(0.183) deleterious(0.01) neutral(0.423) superfamily_ARM repeat PTGER2 5732 genome.wustl.edu 37 14 52781995 52781995 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_000956.3 +1 reviewed p.G243 0.001 58 0% 51 37.3% 3 33.3% - - - HMMPfam_7tm_1,superfamily_SSF81321 LGALS3 3958 genome.wustl.edu 37 14 55611931 55611931 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_002306.3 +1 reviewed p.S232N 0.000 205 0% 262 26.7% 674 25.9% benign(0.003) tolerated(1) - HMMPfam_Gal-bind_lectin,HMMSmart_SM00276,superfamily_Concanavalin A-like lectins/glucanases KTN1 3895 genome.wustl.edu 37 14 56096811 56096811 + Missense_Mutation SNP T T A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001079521.1 +1 validated p.M406K 1.000 165 0% 301 33.2% 44 31.8% benign(0.379) tolerated(0.08) neutral(0.421) NULL ARID4A 5926 genome.wustl.edu 37 14 58790256 58790256 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_002892.3 +1 reviewed p.R168H 0.997 286 0% 456 35.5% 2 0% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_RBB1NT ARID4A 5926 genome.wustl.edu 37 14 58830926 58830926 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_002892.3 +1 reviewed p.E707K 0.996 30 0% 29 24.1% 0 - possibly_damaging(0.614) deleterious(0.01) deleterious(0.619) NULL GALNTL1 57452 genome.wustl.edu 37 14 69806319 69806319 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_020692.2 +1 validated p.I390 0.804 121 0% 179 33.5% 2 0% - - - superfamily_Nucleotide-diphospho-sugar transferases DCAF4 26094 genome.wustl.edu 37 14 73404734 73404734 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_015604.3 +1 reviewed p.S16 0.029 93 0% 105 28.6% 4 50% - - - NULL C14orf43 91748 genome.wustl.edu 37 14 74203738 74203738 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001043318.1 -1 validated p.R571Q 1.000 79 0% 75 34.7% 9 44.4% probably_damaging(0.991) deleterious(0.04) deleterious(0.793) NULL C14orf142 84520 genome.wustl.edu 37 14 93670110 93670110 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_032490.4 -1 validated p.A76T 0.997 630 0% 945 28.7% 47 48.9% benign(0.118) tolerated(0.51) neutral(0.018) NULL SERPINA6 866 genome.wustl.edu 37 14 94780755 94780755 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001756.3 -1 reviewed p.L77 1.000 202 0% 208 29.3% 55 50.9% - - - HMMPfam_Serpin,HMMSmart_SM00093,superfamily_Serpins JAG2 3714 genome.wustl.edu 37 14 105611365 105611365 + Missense_Mutation SNP G G T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_002226.3 -1 reviewed p.R996S 1.000 16 0% 18 33.3% 22 27.2% probably_damaging(1) deleterious(0) deleterious(0.945) NULL ATP10A 57194 genome.wustl.edu 37 15 25924616 25924616 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_024490.3 -1 reviewed p.R1458W 0.001 48 0% 61 29.5% 2 0% probably_damaging(0.983) deleterious(0.04) deleterious(0.778) NULL OTUD7A 161725 genome.wustl.edu 37 15 31776860 31776860 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_130901.1 -1 provisional p.S473L 1.000 55 0% 89 29.2% 2 0% probably_damaging(0.955) deleterious(0) deleterious(0.843) NULL ZNF770 54989 genome.wustl.edu 37 15 35273760 35273760 + Nonsense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_014106.2 -1 validated p.R626* 1.000 278 0% 299 31.1% 21 14.2% - - - HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,superfamily_SSF57667 VPS18 57617 genome.wustl.edu 37 15 41192235 41192235 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_020857.2 +1 reviewed p.R407C 1.000 31 0% 28 35.7% 13 15.3% probably_damaging(0.99) deleterious(0.01) deleterious(0.847) HMMPfam_Pep3_Vps18 SHF 90525 genome.wustl.edu 37 15 45491044 45491045 + Frame_Shift_Del DEL TC TC - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 TC TC Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_138356.2 -1 validated p.K77fs 0.000:0.000 - - - - - - - - - NULL SEMA6D 80031 genome.wustl.edu 37 15 48063368 48063368 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_153618.1 +1 reviewed p.R870W 1.000 132 0% 161 27.3% 1 0% probably_damaging(0.999) deleterious(0.01) deleterious(0.896) NULL LIPC 3990 genome.wustl.edu 37 15 58837951 58837951 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_000236.2 +1 reviewed p.A195 0.003 266 0% 227 29.1% 0 - - - - HMMPfam_Lipase,superfamily_alpha/beta-Hydrolases RORA 6095 genome.wustl.edu 37 15 60803744 60803744 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_134260.2 -1 reviewed p.Q200 1.000 132 0% 169 34.3% 1 0% - - - NULL USP3 9960 genome.wustl.edu 37 15 63862667 63862667 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_006537.2 +1 validated p.R266H 1.000 242 0% 258 32.6% 15 20% possibly_damaging(0.515) tolerated(0.39) neutral(0.190) HMMPfam_UCH,superfamily_SSF54001 HERC1 8925 genome.wustl.edu 37 15 64017518 64017518 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_003922.3 -1 reviewed p.G1181S 1.000 164 0% 189 29.1% 0 - probably_damaging(1) - - NULL PDCD7 10081 genome.wustl.edu 37 15 65425258 65425258 + Missense_Mutation SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_005707.1 -1 reviewed p.K288E 1.000 155 0% 256 31.6% 7 14.2% probably_damaging(0.99) tolerated(0.45) neutral(0.454) NULL MAP2K5 5607 genome.wustl.edu 37 15 67984845 67984845 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_145160.1 +1 reviewed p.N292 1.000 619 0% 749 24.3% 10 30% - - - HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase ANP32A 8125 genome.wustl.edu 37 15 69080119 69080119 + Missense_Mutation SNP T T G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_006305.3 -1 validated p.K65T 1.000 417 0% 506 31.6% 168 36.3% probably_damaging(0.978) deleterious(0.02) deleterious(0.803) superfamily_SSF52058 ENSG00000246762 0 genome.wustl.edu 37 15 72637760 72637760 + RNA SNP C C G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000498972 +1 known NULL 0.000 107 0% 110 37.3% 5 60% - - - - CD276 80381 genome.wustl.edu 37 15 73994829 73994829 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001024736.1 +1 validated p.A105T 0.998 47 0% 37 32.4% 42 33.3% possibly_damaging(0.905) tolerated(0.07) deleterious(0.678) HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin RASGRF1 5923 genome.wustl.edu 37 15 79291062 79291062 + Missense_Mutation SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_002891.4 -1 reviewed p.Q967R 1.000 134 0% 101 26.7% 0 - benign(0.335) deleterious(0.02) deleterious(0.488) HMMPfam_RasGEF_N,HMMSmart_SM00229,superfamily_Ras GEF EFTUD1 79631 genome.wustl.edu 37 15 82444641 82444641 + Missense_Mutation SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_024580.5 -1 validated p.I718M 0.558 309 0% 400 27.3% 18 27.7% probably_damaging(0.999) deleterious(0.03) deleterious(0.855) superfamily_Ribosomal protein S5 domain 2-like RHCG 51458 genome.wustl.edu 37 15 90023542 90023542 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_016321.1 -1 provisional p.S207N 1.000 267 0% 273 29.3% 0 - benign(0.011) tolerated(0.09) neutral(0.297) HMMPfam_Ammonium_transp,superfamily_Ammonium ransporter (Pfam 00909) C15orf42 90381 genome.wustl.edu 37 15 90168724 90168724 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_152259.3 +1 validated p.S1728N 0.000 70 0% 83 33.7% 1 0% benign(0.039) tolerated(0.4) neutral(0.018) NULL KIF7 374654 genome.wustl.edu 37 15 90190109 90190109 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_198525.2 -1 validated p.P580 0.000 58 0% 72 37.5% 2 0% - - - NULL ANPEP 290 genome.wustl.edu 37 15 90347182 90347182 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001150.2 -1 reviewed p.E411K 1.000 84 0% 66 30.3% 7 28.5% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Peptidase_M1,superfamily_SSF55486 IQGAP1 8826 genome.wustl.edu 37 15 91017141 91017141 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_003870.3 +1 reviewed p.A816V 0.997 111 0% 146 30.8% 38 31.5% benign(0) tolerated(1) - HMMPfam_IQ,HMMSmart_SM00015,superfamily_P-loop containing nucleoside triphosphate hydrolases BLM 641 genome.wustl.edu 37 15 91354578 91354578 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_000057.2 +1 reviewed p.P1340S 0.063 254 0% 323 27.2% 10 50% benign(0) tolerated(0.86) neutral(0.001) NULL THOC6 79228 genome.wustl.edu 37 16 3077037 3077037 + Missense_Mutation SNP G G T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_024339.3 +1 validated p.R221L 1.000 381 0% 374 31.8% 62 38.7% benign(0.282) deleterious(0.04) neutral(0.435) superfamily_WD40 repeat-like CREBBP 1387 genome.wustl.edu 37 16 3778177 3778177 + Missense_Mutation SNP G G T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004380.2 -1 reviewed p.L2291M 1.000 65 0% 89 30.3% 39 30.7% unknown(0) tolerated(0.38) - NULL RBFOX1 54715 genome.wustl.edu 37 16 7568166 7568166 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_145891.2 +1 reviewed p.A35 0.924 116 0% 125 34.4% 0 - - - - NULL CIITA 4261 genome.wustl.edu 37 16 11016049 11016049 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_000246.3 +1 reviewed p.V1059M 0.000 172 0% 183 30.6% 14 0% possibly_damaging(0.944) tolerated(0.1) deleterious(0.675) HMMSmart_SM00368,superfamily_RNI-like DEXI 28955 genome.wustl.edu 37 16 11035795 11035795 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_014015.3 -1 validated p.P23L 0.966 64 0% 74 28.4% 11 45.4% possibly_damaging(0.877) deleterious(0.02) deleterious(0.725) NULL ABCC1 4363 genome.wustl.edu 37 16 16149959 16149959 + Missense_Mutation SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004996.3 +1 reviewed p.M495T 1.000 228 0% 212 26.4% 14 28.5% benign(0.349) deleterious(0) deleterious(0.555) HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain DNAH3 55567 genome.wustl.edu 37 16 21011750 21011750 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_017539.1 -1 provisional p.V2073M 1.000 415 0.2% 651 40.9% 4 50% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMSmart_SM00382,HMMPfam_AAA_5,superfamily_P-loop containing nucleoside triphosphate hydrolases TAOK2 9344 genome.wustl.edu 37 16 30002221 30002221 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004783.2 +1 validated p.Q854 0.997 31 0% 31 41.9% 28 32.1% - - - NULL TBC1D10B 26000 genome.wustl.edu 37 16 30369989 30369989 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_015527.3 -1 validated p.H598Y 1.000 46 0% 40 50% 37 29.7% benign(0.034) tolerated(0.12) neutral(0.263) superfamily_Ypt/Rab-GAP domain of gyp1p ZNF689 115509 genome.wustl.edu 37 16 30615594 30615594 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_138447.1 -1 provisional p.N498 0.000 33 0% 37 29.7% 3 0% - - - NULL TRIM72 493829 genome.wustl.edu 37 16 31234185 31234185 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001008274.3 +1 validated p.R260C 0.971 74 0% 76 31.6% 0 - probably_damaging(0.996) deleterious(0.03) deleterious(0.826) NULL ITGAX 3687 genome.wustl.edu 37 16 31368637 31368637 + Missense_Mutation SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_000887.3 +1 reviewed p.L128I 0.848 28 0% 30 33.3% 7 0% benign(0.4) deleterious(0.02) deleterious(0.512) superfamily_SSF69318 ABCC12 94160 genome.wustl.edu 37 16 48121955 48121955 + Missense_Mutation SNP G G T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_033226.2 -1 reviewed p.P1173T 1.000 68 0% 95 31.6% 0 - benign(0.205) tolerated(0.24) neutral(0.057) HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases BRD7 29117 genome.wustl.edu 37 16 50368678 50368679 + Frame_Shift_Del DEL CT CT - rs145896392 byCluster;by1000genomes TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 CT CT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_013263.3 -1 validated p.E277fs 0.079:0.258 - - - - - - - - - NULL KCTD19 146212 genome.wustl.edu 37 16 67333285 67333285 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001100915.1 -1 provisional p.V323I 1.000 128 0% 116 23.3% 0 - benign(0.052) tolerated(0.36) neutral(0.023) NULL TPPP3 51673 genome.wustl.edu 37 16 67424890 67424890 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_015964.2 -1 validated p.C42Y 1.000 198 0% 171 35.7% 2013 47.9% probably_damaging(0.995) deleterious(0) deleterious(0.902) HMMPfam_p25-alpha RLTPR 146206 genome.wustl.edu 37 16 67680144 67680144 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001013838.1 +1 provisional p.A102V 0.012 90 0% 90 34.4% 1 0% possibly_damaging(0.916) tolerated(0.06) deleterious(0.690) NULL HP 3240 genome.wustl.edu 37 16 72089958 72089959 + Frame_Shift_Ins INS - - TG novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000357763 +1 known p.V1fs 0.002:0.002 - - - - - - - - - NULL GAN 8139 genome.wustl.edu 37 16 81411040 81411040 + Missense_Mutation SNP C C T rs112201678 TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_022041.3 +1 reviewed p.R545C 1.000 253 0% 288 10.8% 1 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_Kelch,superfamily_Gal_oxid_central ZC3H18 124245 genome.wustl.edu 37 16 88691637 88691637 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_144604.3 +1 validated p.G690 1.000 62 0% 62 17.7% 20 25% - - - NULL PIEZO1 9780 genome.wustl.edu 37 16 88800396 88800398 + In_Frame_Del DEL CTG CTG - rs144777557 TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 CTG CTG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000451779 -1 known p.Q286in_frame_del 0.035:0.030:0.018 - - - - - - - - - NULL CBFA2T3 863 genome.wustl.edu 37 16 88958654 88958654 + Missense_Mutation SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_005187.4 -1 reviewed p.V207L 1.000 59 0% 59 40.7% 3 0% benign(0.003) deleterious(0.02) neutral(0.383) HMMPfam_TAFH,HMMSmart_SM00549 TUSC5 286753 genome.wustl.edu 37 17 1198837 1198837 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_172367.2 +1 validated p.R147H 1.000 63 0% 67 16.4% 0 - probably_damaging(0.973) deleterious(0) deleterious(0.859) HMMPfam_CD225 GGT6 124975 genome.wustl.edu 37 17 4461796 4461796 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001122890.1 -1 validated p.A332 0.001 18 0% 21 42.9% 22 50% - - - HMMPfam_G_glu_transpept SLC52A1 55065 genome.wustl.edu 37 17 4937879 4937879 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001104577.1 -1 validated p.R8H 0.391 102 0% 153 30.1% 7 57.1% benign(0.019) tolerated(0.15) neutral(0.242) NULL ZNF594 84622 genome.wustl.edu 37 17 5085452 5085452 + Silent SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_032530.1 -1 validated p.R700 0.201 246 0% 272 22.4% 2 0% - - - HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 SPEM1 374768 genome.wustl.edu 37 17 7324691 7324691 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_199339.2 +1 provisional p.A233T 0.000 25 0% 29 37.9% 0 - benign(0.063) tolerated(0.44) neutral(0.017) NULL CHD3 1107 genome.wustl.edu 37 17 7807196 7807196 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001005271.2 +1 reviewed p.A1320T 0.998 210 0% 222 24.8% 77 36.3% benign(0.001) - - NULL KCNAB3 9196 genome.wustl.edu 37 17 7827491 7827491 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004732.2 -1 reviewed p.M268I 1.000 241 0.4% 273 30.4% 4 0% benign(0.002) tolerated(0.22) neutral(0.042) HMMPfam_Aldo_ket_red,superfamily_Aldo/ket_red ALOX12B 242 genome.wustl.edu 37 17 7978925 7978925 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001139.2 -1 reviewed p.R548W 0.083 176 0% 161 26.7% 0 - probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMPfam_Lipoxygenase,superfamily_Lipoxygenase ALOX12B 242 genome.wustl.edu 37 17 7979620 7979620 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001139.2 -1 reviewed p.R469W 0.056 80 0% 73 31.5% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Lipoxygenase,superfamily_Lipoxygenase MYH2 4620 genome.wustl.edu 37 17 10430027 10430027 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001100112.1 -1 reviewed p.S1359F 1.000 494 0% 447 25.7% 0 - benign(0.258) deleterious(0) deleterious(0.472) HMMPfam_Myosin_tail_1 CCDC144A 9720 genome.wustl.edu 37 17 16593810 16593810 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_014695.1 +1 provisional p.Q32 0.002 70 0% 82 36.6% 0 - - - - NULL MAP2K3 5606 genome.wustl.edu 37 17 21207763 21207763 + Missense_Mutation SNP C C G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_145109.2 +1 reviewed p.I198M 1.000 360 0% 459 15.5% 65 0% benign(0.043) tolerated(0.06) neutral(0.325) HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase LOC440419 440419 genome.wustl.edu 37 17 25746825 25746825 + RNA SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef XR_040504.2 +1 model NULL 0.897 74 0% 89 29.2% 0 - - - - - MYO18A 399687 genome.wustl.edu 37 17 27434173 27434173 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_078471.3 -1 validated p.R1122 0.981 185 0% 179 35.8% 7 42.8% - - - HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases TMEM132E 124842 genome.wustl.edu 37 17 32963205 32963205 + Missense_Mutation SNP C C G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_207313.1 +1 provisional p.S629R 1.000 44 0% 33 36.4% 0 - possibly_damaging(0.513) tolerated(0.87) neutral(0.173) NULL RAD51D 5892 genome.wustl.edu 37 17 33428353 33428353 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001142571.1 -1 reviewed p.S277N 0.974 105 0% 92 27.2% 11 18.1% benign(0.011) tolerated(0.5) neutral(0.011) HMMSmart_AAA,superfamily_SSF52540 MLLT6 4302 genome.wustl.edu 37 17 36871867 36871869 + In_Frame_Del DEL CTC CTC - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 CTC CTC Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_005937.3 +1 validated p.S277in_frame_del 0.967:0.994:0.998 - - - - - - - - - NULL MLLT6 4302 genome.wustl.edu 37 17 36876025 36876025 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_005937.3 +1 validated p.A678T 0.715 46 0% 50 28% 37 45.9% benign(0.005) tolerated(0.38) neutral(0.018) NULL KRTAP3-1 83896 genome.wustl.edu 37 17 39165306 39165306 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_031958.1 -1 reviewed p.R7 0.877 199 0% 245 27.3% 0 - - - - HMMPfam_Keratin_matx KRTAP1-5 83895 genome.wustl.edu 37 17 39183040 39183043 + Frame_Shift_Del DEL CTGT CTGT - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 CTGT CTGT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_031957.1 -1 reviewed p.D122fs 1.000:1.000:1.000:1.000 - - - - - - - - - HMMPfam_Keratin_B2 ENSG00000241241 0 genome.wustl.edu 37 17 39258307 39258307 + Missense_Mutation SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000440582 -1 known p.Q52R 0.000 46 0% 53 28.3% 0 - unknown(0) tolerated(0.52) - PatternScan_TNFR_NGFR_1,HMMPfam_Keratin_B2 KRTAP4-9 100132386 genome.wustl.edu 37 17 39262121 39262121 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000391415 +1 known p.R161C 0.005 89 0% 78 23.1% 0 - unknown(0) deleterious(0.02) - HMMPfam_Keratin_B2 LEPREL4 10609 genome.wustl.edu 37 17 39964157 39964157 + Missense_Mutation SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_006455.2 -1 validated p.H339R 1.000 93 0% 47 23.4% 18 27.7% probably_damaging(0.956) deleterious(0.01) deleterious(0.805) NULL NAGLU 4669 genome.wustl.edu 37 17 40695866 40695866 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_000263.3 +1 reviewed p.S614 0.005 45 0% 30 33.3% 34 44.1% - - - HMMPfam_NAGLU VPS25 84313 genome.wustl.edu 37 17 40925775 40925775 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_032353.2 +1 provisional p.R26 1.000 74 0% 32 18.8% 106 5.6% - - - "HMMPfam_ESCRT-II,superfamily_""Winged helix"" DNA-binding domain" AARSD1 80755 genome.wustl.edu 37 17 41113333 41113334 + Frame_Shift_Del DEL CA CA - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 CA CA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001136042.2 -1 validated p.V243fs 1.000:1.000 - - - - - - - - - NULL TMEM101 84336 genome.wustl.edu 37 17 42089473 42089473 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_032376.2 -1 provisional p.Y199 0.994 94 0% 100 29% 71 25.3% - - - NULL TEX34 124783 genome.wustl.edu 37 17 43333399 43333399 + Silent SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_152343.2 -1 validated p.V50 0.003 125 0% 105 35.2% 0 - - - - NULL PRR15L 79170 genome.wustl.edu 37 17 46030441 46030459 + Frame_Shift_Del DEL GGGTGTTAAAGTCGCTGTT GGGTGTTAAAGTCGCTGTT - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 GGGTGTTAAAGTCGCTGTT GGGTGTTAAAGTCGCTGTT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_024320.2 -1 provisional p.N48fs 1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.998:1.000:1.000:1.000:1.000:0.773:0.697:0.986:0.987:0.958:0.078:0.044 - - - - - - - - - NULL GNGT2 2793 genome.wustl.edu 37 17 47284761 47284763 + In_Frame_Del DEL CTT CTT - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 CTT CTT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_031498.2 -1 reviewed p.K8in_frame_del 1.000:1.000:1.000 - - - - - - - - - HMMPfam_G-gamma,HMMSmart_SM00224,superfamily_Transducin (heterotrimeric G protein) gamma chain SPOP 8405 genome.wustl.edu 37 17 47699372 47699372 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001007226.1 -1 reviewed p.E46K 1.000 242 0% 355 40% 22 18.1% probably_damaging(0.988) tolerated(0.3) neutral(0.466) HMMPfam_MATH,HMMSmart_SM00061,superfamily_TRAF domain-like CACNA1G 8913 genome.wustl.edu 37 17 48694808 48694808 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_018896.3 +1 validated p.Q1677 1.000 102 0% 109 27.5% 0 - - - - HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels ABCC3 8714 genome.wustl.edu 37 17 48745245 48745250 + In_Frame_Del DEL GTGTAC GTGTAC - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 GTGTAC GTGTAC Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_003786.3 +1 reviewed p.YV556in_frame_del 0.992:0.995:0.963:1.000:1.000:0.998 - - - - - - - - - HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain MED13 9969 genome.wustl.edu 37 17 60042472 60042472 + Missense_Mutation SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_005121.2 -1 reviewed p.Q1580R 1.000 266 0% 268 27.6% 10 30% benign(0.037) tolerated(0.44) neutral(0.015) HMMPfam_TRAP_240kDa KCNH6 81033 genome.wustl.edu 37 17 61611625 61611625 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_030779.2 +1 reviewed p.A352T 1.000 99 0% 106 30.2% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels ERN1 2081 genome.wustl.edu 37 17 62122749 62122749 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001433.3 -1 reviewed p.R875W 1.000 143 0% 144 32.6% 5 40% probably_damaging(0.984) deleterious(0.01) deleterious(0.836) HMMPfam_Ribonuc_2-5A HELZ 9931 genome.wustl.edu 37 17 65104745 65104745 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_014877.3 -1 validated p.S1529 0.000 294 0% 369 30.4% 7 71.4% - - - NULL ABCA8 10351 genome.wustl.edu 37 17 66871807 66871807 + Missense_Mutation SNP C C G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_007168.2 -1 reviewed p.E1440Q 1.000 162 0% 192 19.8% 5 0% probably_damaging(0.998) deleterious(0.01) deleterious(0.880) HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases GPR142 350383 genome.wustl.edu 37 17 72368479 72368479 + Missense_Mutation SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_181790.1 +1 provisional p.M377V 1.000 75 0% 67 31.3% 0 - benign(0.003) tolerated(0.36) neutral(0.020) HMMPfam_7tm_1,superfamily_SSF81321 UNK 85451 genome.wustl.edu 37 17 73805899 73805899 + Nonsense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001080419.1 +1 provisional p.Q131* 1.000 39 0% 37 21.6% 13 23% - - - NULL UNC13D 201294 genome.wustl.edu 37 17 73836363 73836363 + Silent SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_199242.2 -1 reviewed p.T267 0.074 81 0% 76 30.3% 6 16.6% - - - superfamily_C2 domain (Calcium/lipid-binding domain CaLB) RNF213 57674 genome.wustl.edu 37 17 78356844 78356844 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000508628 +1 known p.A4682T 0.000 356 0% 372 32.3% 25 36% possibly_damaging(0.455) tolerated(0.46) neutral(0.161) NULL ADCYAP1 116 genome.wustl.edu 37 18 905464 905464 + Missense_Mutation SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001099733.1 +1 reviewed p.P26H 1.000 52 0% 65 44.6% 1 0% probably_damaging(1) deleterious(0) deleterious(0.945) NULL PTPRM 5797 genome.wustl.edu 37 18 8296437 8296437 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001105244.1 +1 reviewed p.Y942 0.241 297 0% 540 28.3% 18 0% - - - HMMPfam_Y_phosphatase,HMMSmart_SM00194,superfamily_(Phosphotyrosine protein) phosphatases II MIB1 57534 genome.wustl.edu 37 18 19424189 19424189 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_020774.2 +1 validated p.A729V 1.000 297 0% 318 29.6% 16 18.7% benign(0.071) tolerated(0.06) neutral(0.328) HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK INO80C 125476 genome.wustl.edu 37 18 33077820 33077820 + Missense_Mutation SNP T T A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001098817.1 -1 validated p.I7F 0.556 78 0% 72 36.1% 12 41.6% possibly_damaging(0.733) deleterious(0) deleterious(0.713) NULL SETBP1 26040 genome.wustl.edu 37 18 42281471 42281471 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_015559.2 +1 validated p.R54C 0.918 88 0% 102 26.5% 4 0% probably_damaging(0.989) deleterious(0.03) deleterious(0.804) NULL SETBP1 26040 genome.wustl.edu 37 18 42532386 42532386 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_015559.2 +1 validated p.D1027 1.000 137 0% 121 26.4% 6 16.6% - - - HMMPfam_AT_hook,HMMSmart_SM00384 LOXHD1 125336 genome.wustl.edu 37 18 44057674 44057674 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001145472.2 -1 reviewed p.R1084C 1.000 107 0% 101 29.7% 0 - probably_damaging(0.997) deleterious(0.02) deleterious(0.849) HMMPfam_PLAT,superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain) CXXC1 30827 genome.wustl.edu 37 18 47809321 47809321 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001101654.1 -1 validated p.T580M 1.000 101 1% 144 25.7% 105 37.1% probably_damaging(1) deleterious(0) deleterious(0.945) NULL SHC2 25759 genome.wustl.edu 37 19 438736 438736 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_012435.2 -1 validated p.S234 0.001 81 1.2% 105 38.1% 22 9% - - - HMMPfam_PID,HMMSmart_PTB,superfamily_SSF50729 BSG 682 genome.wustl.edu 37 19 580779 580779 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001728.2 +1 reviewed p.D263 0.000 48 0% 57 35.1% 778 31.3% - - - HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin PTBP1 5725 genome.wustl.edu 37 19 804372 804372 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_002819.4 +1 reviewed p.G123 1.000 92 0% 97 27.8% 110 39% - - - HMMSmart_RRM,superfamily_SSF54928 C19orf6 91304 genome.wustl.edu 37 19 1014350 1014350 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001033026.1 -1 validated p.R116 0.997 39 0% 40 35% 84 35.7% - - - HMMPfam_Membralin SBNO2 22904 genome.wustl.edu 37 19 1149405 1149407 + In_Frame_Del DEL AGA AGA - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 AGA AGA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_014963.2 -1 validated p.F43in_frame_del 0.010:0.012:0.010 - - - - - - - - - NULL TLE2 7089 genome.wustl.edu 37 19 3006493 3006493 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_003260.4 -1 validated p.G475 0.762 24 0% 20 20% 42 19% - - - HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40 MPND 84954 genome.wustl.edu 37 19 4352912 4352935 + In_Frame_Del DEL GAGGAGGAGGAGTTGCTGATGGAA GAGGAGGAGGAGTTGCTGATGGAA - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 GAGGAGGAGGAGTTGCTGATGGAA GAGGAGGAGGAGTTGCTGATGGAA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_032868.4 +1 validated p.ELLMEEEE187in_frame_del 1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.997:1.000:1.000:1.000:0.999:0.999:0.998:0.998:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.999 - - - - - - - - - NULL CHAF1A 10036 genome.wustl.edu 37 19 4429578 4429578 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_005483.2 +1 validated p.A583V 0.986 125 0% 117 24.8% 14 21.4% possibly_damaging(0.911) deleterious(0.02) deleterious(0.746) NULL HDGFRP2 84717 genome.wustl.edu 37 19 4499546 4499546 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001001520.1 +1 reviewed p.R545Q 0.996 91 0% 129 32.6% 85 36.4% probably_damaging(0.999) deleterious(0.02) deleterious(0.873) NULL SAFB 6294 genome.wustl.edu 37 19 5667093 5667093 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_002967.2 +1 reviewed p.G791S 0.936 25 0% 31 29% 87 35.6% unknown(0) tolerated(0.22) - superfamily_SSF54928 PRR22 163154 genome.wustl.edu 37 19 5783604 5783604 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001134316.1 -1 validated p.L218 0.004 20 0% 24 25% 5 20% - - - NULL MUC16 94025 genome.wustl.edu 37 19 9073256 9073256 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_024690.2 -1 validated p.D4730 0.000 176 0% 193 41.5% 0 - - - - NULL OR1M1 125963 genome.wustl.edu 37 19 9204034 9204034 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001004456.1 +1 provisional p.M38I 0.000 187 0.5% 234 30.3% 0 - benign(0) deleterious(0) neutral(0.445) superfamily_Family A G protein-coupled receptor-like TYK2 7297 genome.wustl.edu 37 19 10476340 10476340 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_003331.4 -1 reviewed p.G288 0.000 25 0% 18 38.9% 22 22.7% - - - NULL ZNF442 79973 genome.wustl.edu 37 19 12460865 12460865 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_030824.2 -1 validated p.A512T 0.116 263 0.4% 377 24.1% 1 100% benign(0.029) deleterious(0.01) neutral(0.407) superfamily_SSF57667 CYP4F11 57834 genome.wustl.edu 37 19 16045079 16045079 + Missense_Mutation SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001128932.1 -1 reviewed p.R47L 0.000 119 0% 116 25% 0 - benign(0.029) tolerated(0.22) neutral(0.044) NULL IFI30 10437 genome.wustl.edu 37 19 18286486 18286486 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_006332.3 +1 reviewed p.D154 0.657 82 0% 86 29.1% 291 16.8% - - - HMMPfam_GILT KIAA1683 80726 genome.wustl.edu 37 19 18378170 18378170 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001145304.1 -1 validated p.K60 0.000 156 0% 163 33.7% 0 - - - - NULL UPF1 5976 genome.wustl.edu 37 19 18958581 18958581 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_002911.3 +1 reviewed p.V134M 1.000 230 0% 333 28.8% 22 40.9% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_UPF1_Zn_bind ZNF507 22847 genome.wustl.edu 37 19 32851497 32851497 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001136156.1 +1 validated p.R778Q 1.000 338 0% 419 26.7% 8 0% probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers LSM14A 26065 genome.wustl.edu 37 19 34712590 34712590 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001114093.1 +1 validated p.G439S 1.000 250 0% 267 31.5% 85 36.4% probably_damaging(0.974) deleterious(0.04) deleterious(0.765) NULL KIRREL2 84063 genome.wustl.edu 37 19 36349690 36349690 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_199180.2 +1 validated p.R149H 0.022 202 0% 138 38.4% 0 - benign(0.002) tolerated(0.46) neutral(0.012) HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_C2-set_2,superfamily_Immunoglobulin WDR87 83889 genome.wustl.edu 37 19 38385624 38385624 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_031951.3 -1 provisional p.S201N 0.010 90 0% 123 30.1% 0 - possibly_damaging(0.786) - - HMMSmart_SM00320,superfamily_WD40 repeat-like NUMBL 9253 genome.wustl.edu 37 19 41174010 41174010 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004756.3 -1 validated p.P398L 0.994 19 0% 29 37.9% 30 23.3% benign(0) deleterious(0.02) neutral(0.383) NULL ZNF574 64763 genome.wustl.edu 37 19 42585370 42585370 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_022752.5 +1 validated p.A871V 0.977 33 0% 36 25% 28 32.1% probably_damaging(0.965) tolerated(0.2) neutral(0.456) NULL CIC 23152 genome.wustl.edu 37 19 42794056 42794056 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_015125.3 +1 validated p.D473N 0.998 137 0% 141 34.8% 24 12.5% possibly_damaging(0.636) deleterious(0) deleterious(0.667) NULL XRCC1 7515 genome.wustl.edu 37 19 44056353 44056353 + Nonsense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_006297.2 -1 reviewed p.R300* 0.004 142 0% 91 30.8% 42 4.7% - - - NULL ZNF283 284349 genome.wustl.edu 37 19 44341227 44341227 + Missense_Mutation SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_181845.1 +1 validated p.V78A 1.000 627 0% 838 25.4% 4 0% possibly_damaging(0.942) deleterious(0) deleterious(0.832) HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352) SYMPK 8189 genome.wustl.edu 37 19 46330878 46330878 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004819.2 -1 reviewed p.R691C 1.000 99 0% 124 31.5% 81 41.9% probably_damaging(0.999) tolerated(0.18) deleterious(0.546) superfamily_ARM repeat ENSG00000230510 0 genome.wustl.edu 37 19 47030298 47030298 + Missense_Mutation SNP G G C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000414155 -1 known p.A37G 1.000 106 0% 168 11.9% 1 0% probably_damaging(0.998) tolerated(0.06) deleterious(0.797) NULL CYTH2 9266 genome.wustl.edu 37 19 48982432 48982432 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_017457.4 +1 reviewed p.R390W 1.000 166 0% 160 28.7% 120 34.1% probably_damaging(0.975) deleterious(0) deleterious(0.861) NULL TRPM4 54795 genome.wustl.edu 37 19 49713496 49713496 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_017636.2 +1 provisional p.S1054 0.994 115 0% 109 28.4% 214 45.3% - - - NULL PTH2 113091 genome.wustl.edu 37 19 49926533 49926533 + Missense_Mutation SNP G G C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_178449.3 -1 validated p.L22V 0.132 10 0.000 9 0.444 0 - unknown(0) deleterious(0) - NULL ZNF808 388558 genome.wustl.edu 37 19 53056766 53056766 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001039886.3 +1 validated p.R199 0.015 504 0% 677 37.4% 2 50% - - - NULL ZNF331 55422 genome.wustl.edu 37 19 54081146 54081146 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001079906.1 +1 validated p.C444 0.993 98 0% 78 39.7% 7 14.2% - - - HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 MBOAT7 79143 genome.wustl.edu 37 19 54684691 54684691 + Missense_Mutation SNP C C T rs185682596 by1000genomes TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_024298.3 -1 reviewed p.R218H 1.000 17 0% 27 25.9% 43 39.5% possibly_damaging(0.843) tolerated(0.2) neutral(0.372) HMMPfam_MBOAT TNNT1 7138 genome.wustl.edu 37 19 55658506 55658506 + Missense_Mutation SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_003283.4 -1 reviewed p.Q7R 0.993 167 0% 161 29.8% 2 50% unknown(0) tolerated(0.32) - NULL NLRP4 147945 genome.wustl.edu 37 19 56379194 56379194 + Missense_Mutation SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_134444.4 +1 validated p.L769P 0.000 265 0% 243 31.7% 0 - benign(0.004) tolerated(0.18) neutral(0.056) HMMSmart_SM00368,superfamily_RNI-like ZNF211 10520 genome.wustl.edu 37 19 58153484 58153484 + Missense_Mutation SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_006385.3 +1 validated p.K557E 0.970 202 0% 299 30.4% 12 25% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 ZNF606 80095 genome.wustl.edu 37 19 58512672 58512672 + Missense_Mutation SNP G G T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_025027.3 -1 validated p.P6T 0.885 95 0% 142 19.7% 1 0% unknown(0) deleterious(0) - NULL FAM110A 83541 genome.wustl.edu 37 20 825658 825658 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001042353.1 +1 validated p.L71 1.000 10 0% 14 35.7% 25 32% - - - NULL SLC4A11 83959 genome.wustl.edu 37 20 3209220 3209220 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_032034.3 -1 reviewed p.A792T 1.000 35 0% 45 33.3% 28 21.4% probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMPfam_HCO3_cotransp RBBP9 10741 genome.wustl.edu 37 20 18476509 18476509 + Missense_Mutation SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_006606.2 -1 reviewed p.C39R 1.000 249 0% 350 28% 6 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_DUF1234,superfamily_alpha/beta-Hydrolases RBM39 9584 genome.wustl.edu 37 20 34302145 34302145 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_184234.1 -1 reviewed p.T353I 1.000 311 0% 334 32% 164 37.8% probably_damaging(0.991) deleterious(0) deleterious(0.889) NULL SOGA1 140710 genome.wustl.edu 37 20 35422657 35422657 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000237536 -1 known p.I1276 0.892 62 1.6% 63 25.4% 1 100% - - - NULL CTNNBL1 56259 genome.wustl.edu 37 20 36468564 36468564 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_030877.3 +1 reviewed p.R425Q 1.000 172 0% 146 31.5% 61 27.8% probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_ARM repeat TGM2 7052 genome.wustl.edu 37 20 36770574 36770574 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004613.2 -1 reviewed p.R296H 0.961 320 0% 280 26.4% 126 3.9% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Transglut_core,HMMSmart_SM00460,superfamily_Cysteine proteinases HNF4A 3172 genome.wustl.edu 37 20 43043187 43043187 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_000457.3 +1 reviewed p.A178V 0.212 184 0% 193 25.9% 0 - benign(0) tolerated(0.34) neutral(0.023) superfamily_Nuclear receptor ligand-binding domain CSE1L 1434 genome.wustl.edu 37 20 47679882 47679885 + Splice_Site DEL GTAA GTAA - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 GTAA GTAA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001316.2 +1 reviewed e2+1 1.000:1.000 - - - - - - - - - - KCNG1 3755 genome.wustl.edu 37 20 49620691 49620691 + Missense_Mutation SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_002237.3 -1 reviewed p.R476M 0.998 126 0% 127 29.9% 7 42.8% probably_damaging(0.994) tolerated(0.06) deleterious(0.774) NULL RTEL1 51750 genome.wustl.edu 37 20 62321689 62321689 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_032957.3 +1 reviewed p.G770R 0.012 83 0% 73 32.9% 11 18.1% benign(0.138) tolerated(0.08) neutral(0.311) NULL UCKL1 54963 genome.wustl.edu 37 20 62572183 62572183 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000358711 -1 known p.A398T 0.982 35 0% 32 18.8% 47 34% possibly_damaging(0.507) - - NULL USP25 29761 genome.wustl.edu 37 21 17177486 17177486 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_013396.3 +1 validated p.A230V 1.000 493 0% 529 25.5% 10 20% benign(0.131) tolerated(0.1) neutral(0.297) HMMPfam_UCH,superfamily_Cysteine proteinases NCAM2 4685 genome.wustl.edu 37 21 22696749 22696750 + Frame_Shift_Del DEL AG AG - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 AG AG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004540.2 +1 reviewed p.G225fs 0.999:1.000 - - - - - - - - - HMMSmart_IGc2,HMMPfam_I-set,superfamily_SSF48726 KRTAP6-3 337968 genome.wustl.edu 37 21 31964993 31964993 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_181605.3 +1 validated p.D77N 0.705 327 0% 381 31.2% 0 - unknown(0) - - NULL C21orf59 56683 genome.wustl.edu 37 21 33979957 33979957 + Splice_Site SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_021254.1 -1 predicted e3+2 1.000 519 0% 542 23.8% 0 - - - - - SYNJ1 8867 genome.wustl.edu 37 21 34038359 34038359 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_003895.3 -1 validated p.T680I 1.000 151 0% 156 26.9% 1 0% probably_damaging(0.969) deleterious(0) deleterious(0.856) HMMSmart_SM00128,HMMPfam_Exo_endo_phos,superfamily_DNase I-like DOPEY2 9980 genome.wustl.edu 37 21 37623571 37623571 + Missense_Mutation SNP A A G rs144310448 by1000genomes TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_005128.2 +1 validated p.S1704G 1.000 235 0% 262 32.4% 9 33.3% possibly_damaging(0.458) tolerated(0.2) neutral(0.199) NULL ERG 2078 genome.wustl.edu 37 21 39764312 39764312 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001136154.1 -1 validated p.T274M 0.933 95 0% 90 34.4% 13 0% benign(0) tolerated(0.23) neutral(0.042) NULL PCNT 5116 genome.wustl.edu 37 21 47850530 47850530 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_006031.5 +1 reviewed p.R2675W 0.618 36 0% 36 33.3% 6 50% probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL MICAL3 57553 genome.wustl.edu 37 22 18314825 18314827 + In_Frame_Del DEL CTC CTC - novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 CTC CTC Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_015241.2 -1 provisional p.E950in_frame_del 0.639:0.995:1.000 - - - - - - - - - NULL FAM108A5P 729495 genome.wustl.edu 37 22 21024954 21024954 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef XM_002343784.1 -1 model p.V202M 1.000 103 0% 76 44.7% 0 - - - - superfamily_alpha/beta-Hydrolases ZNF70 7621 genome.wustl.edu 37 22 24087148 24087148 + Silent SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_021916.2 -1 provisional p.N60 0.000 170 0% 215 34% 1 0% - - - NULL ADRBK2 157 genome.wustl.edu 37 22 26091171 26091172 + Frame_Shift_Ins INS - - T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_005160.3 +1 reviewed p.L385fs 0.996:0.995 - - - - - - - - - HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase SRRD 402055 genome.wustl.edu 37 22 26884148 26884148 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001013694.2 +1 validated p.G135E 0.000 333 0.3% 320 29.4% 10 20% possibly_damaging(0.898) deleterious(0.02) deleterious(0.738) NULL TFIP11 24144 genome.wustl.edu 37 22 26892176 26892176 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001008697.1 -1 validated p.R571H 1.000 152 0.7% 160 27.5% 29 34.4% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_TFP11 PICK1 9463 genome.wustl.edu 37 22 38468494 38468494 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001039583.1 +1 reviewed p.D189 1.000 83 0% 77 29.9% 26 26.9% - - - HMMPfam_Arfaptin PLA2G6 8398 genome.wustl.edu 37 22 38536074 38536074 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_003560.2 -1 reviewed p.V238M 0.765 93 0% 84 45.2% 7 28.5% probably_damaging(0.992) tolerated(0.86) neutral(0.448) HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat KCNJ4 3761 genome.wustl.edu 37 22 38822948 38822948 + Missense_Mutation SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004981.1 -1 reviewed p.V397A 0.904 13 0% 11 36.4% 0 - benign(0) tolerated(1) - NULL CELSR1 9620 genome.wustl.edu 37 22 46794514 46794514 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_014246.1 -1 reviewed p.G1811 1.000 71 0% 49 26.5% 13 23% - - - HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2 GRAMD4 23151 genome.wustl.edu 37 22 47064785 47064785 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_015124.2 +1 validated p.R355H 1.000 214 0% 139 29.5% 32 31.2% possibly_damaging(0.951) deleterious(0.03) deleterious(0.758) NULL TUBGCP6 85378 genome.wustl.edu 37 22 50658202 50658202 + Missense_Mutation SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_020461.3 -1 reviewed p.S1396G 0.004 45 0% 26 30.8% 19 31.5% benign(0.003) tolerated(0.21) neutral(0.044) HMMPfam_Spc97_Spc98 TUBGCP6 85378 genome.wustl.edu 37 22 50666396 50666396 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_020461.3 -1 reviewed p.P451L 0.996 97 0% 104 30.8% 8 25% benign(0.002) tolerated(0.07) neutral(0.319) HMMPfam_Spc97_Spc98 ARSA 410 genome.wustl.edu 37 22 51065999 51065999 + Missense_Mutation SNP A A C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_000487.4 -1 reviewed p.L68R 0.994 17 0% 22 31.8% 37 35.1% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Sulfatase,PatternScan_SULFATASE_1,superfamily_Alkaline_phosphatase_core ENSG00000215608 0 genome.wustl.edu 37 GL000212.1 126762 126762 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000400673 +1 known p.E153K NULL 107 0% 99 55.6% 5 0% - - - NULL ENSG00000198888 0 genome.wustl.edu 37 MT 4224 4224 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000361390 +1 known p.S306 NULL 13 0.000 4 1.000 3849 67.5% - - - HMMPfam_NADHdh KLHL15 80311 genome.wustl.edu 37 X 24024737 24024737 + Missense_Mutation SNP T T A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_030624.2 -1 reviewed p.Y25F 1.000 134 0% 171 30.4% 0 - possibly_damaging(0.928) deleterious(0.02) deleterious(0.758) superfamily_BTB/POZ_fold,HMMPfam_BTB DMD 1756 genome.wustl.edu 37 X 31224764 31224764 + Missense_Mutation SNP C C G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004006.2 -1 reviewed p.R3195P 1.000 351 0% 453 30.5% 2 50% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_efhand_1,superfamily_EF-hand CXorf59 286464 genome.wustl.edu 37 X 36103594 36103594 + Missense_Mutation SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_173695.2 +1 validated p.N194D 0.000 262 0% 265 35.5% 5 100% possibly_damaging(0.873) tolerated(0.27) neutral(0.373) NULL CXorf27 25763 genome.wustl.edu 37 X 37850252 37850252 + Missense_Mutation SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_012274.1 +1 validated p.L54I 0.000 205 0% 223 31.8% 0 - possibly_damaging(0.868) deleterious(0) deleterious(0.782) superfamily_Histone-fold SYTL5 94122 genome.wustl.edu 37 X 37981397 37981397 + Missense_Mutation SNP A A T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_138780.2 +1 reviewed p.E590D 1.000 375 0.3% 464 29.5% 0 - probably_damaging(0.957) tolerated(0.15) deleterious(0.641) HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB GPR34 2857 genome.wustl.edu 37 X 41554957 41554957 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001097579.1 +1 validated p.R24H 0.000 147 0.7% 156 29.5% 5 0% benign(0) tolerated(0.75) neutral(0.002) superfamily_Family A G protein-coupled receptor-like CFP 5199 genome.wustl.edu 37 X 47486974 47486974 + Missense_Mutation SNP C C T rs34484382 TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001145252.1 -1 reviewed p.R157Q 0.000 56 0% 55 29.1% 3 0% benign(0.073) tolerated(0.6) neutral(0.009) HMMPfam_TSP_1,HMMSmart_TSP1,superfamily_TSP1 SSX3 10214 genome.wustl.edu 37 X 48213516 48213516 + Silent SNP G G T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_021014.2 -1 reviewed p.I66 0.000 546 0% 826 32.8% 0 - - - - HMMSmart_KRAB,superfamily_Krueppel-associated_box IQSEC2 23096 genome.wustl.edu 37 X 53265011 53265011 + Missense_Mutation SNP T T C novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001111125.1 -1 validated p.K1152R 1.000 47 0% 58 37.9% 0 - probably_damaging(0.998) deleterious(0.03) deleterious(0.839) NULL MAGED2 10916 genome.wustl.edu 37 X 54837339 54837339 + Splice_Site SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef ENST00000375060 +1 known e4+2 1.000 119 0% 135 25.2% 121 0% - - - - OTUD6A 139562 genome.wustl.edu 37 X 69283055 69283055 + Silent SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_207320.1 +1 provisional p.H227 0.138 45 0% 35 42.9% 0 - - - - HMMPfam_OTU,superfamily_SSF54001 MED12 9968 genome.wustl.edu 37 X 70343076 70343076 + Missense_Mutation SNP G G T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_005120.2 +1 reviewed p.E539D 1.000 227 0% 280 25% 10 10% benign(0.066) tolerated(0.24) neutral(0.042) NULL HDX 139324 genome.wustl.edu 37 X 83724391 83724391 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_144657.4 -1 validated p.A114T 0.397 772 0% 907 31.4% 0 - benign(0.049) deleterious(0.03) neutral(0.367) NULL KLHL4 56062 genome.wustl.edu 37 X 86890627 86890627 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_057162.2 +1 reviewed p.H593Y 1.000 335 0% 488 30.7% 0 - probably_damaging(0.998) deleterious(0) deleterious(0.919) HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain KLHL4 56062 genome.wustl.edu 37 X 86890711 86890711 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_057162.2 +1 reviewed p.V621I 1.000 269 0% 317 27.8% 0 - benign(0.103) deleterious(0) neutral(0.453) HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain DIAPH2 1730 genome.wustl.edu 37 X 96212929 96212929 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_006729.4 +1 reviewed p.G573R 0.002 229 0% 243 31.7% 2 0% unknown(0) deleterious(0.04) - NULL COL4A6 1288 genome.wustl.edu 37 X 107434698 107434698 + Missense_Mutation SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001847.2 -1 reviewed p.R417C 0.846 235 0% 248 28.2% 3 0% unknown(0) deleterious(0.01) - HMMPfam_Collagen NKRF 55922 genome.wustl.edu 37 X 118726439 118726439 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_017544.3 -1 reviewed p.A8T 1.000 441 0% 478 30.5% 3 100% probably_damaging(1) deleterious(0) deleterious(0.945) NULL TFDP3 51270 genome.wustl.edu 37 X 132351158 132351158 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_016521.2 -1 reviewed p.G377D 1.000 125 0% 89 22.5% 0 - probably_damaging(0.96) tolerated(0.11) deleterious(0.675) NULL ARHGEF6 9459 genome.wustl.edu 37 X 135863011 135863011 + Missense_Mutation SNP G G T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_004840.2 -1 reviewed p.L11I 1.000 273 0% 270 31.1% 1 0% probably_damaging(0.97) deleterious(0) deleterious(0.857) HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain RBMX 27316 genome.wustl.edu 37 X 135956318 135956318 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_002139.3 -1 reviewed p.G387S 1.000 142 0% 142 22.5% 132 0% unknown(0) deleterious(0.03) - NULL MAGEC1 9947 genome.wustl.edu 37 X 140992754 140992754 + Splice_Site SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_005462.4 +1 reviewed e1-2 0.058 230 0% 222 27% 0 - - - - - SLITRK4 139065 genome.wustl.edu 37 X 142718107 142718107 + Missense_Mutation SNP C C T novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_173078.3 -1 reviewed p.R273H 0.996 161 0% 155 26.5% 0 - benign(0.347) tolerated(0.16) neutral(0.169) NULL AFF2 2334 genome.wustl.edu 37 X 148068912 148068912 + Silent SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_002025.3 +1 reviewed p.P1213 0.223 218 0% 308 35.7% 0 - - - - HMMPfam_AF-4 MAMLD1 10046 genome.wustl.edu 37 X 149639660 149639660 + Silent SNP G G A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_005491.3 +1 reviewed p.Q605 0.998 96 0% 107 30.8% 1 0% - - - NULL ZNF185 7739 genome.wustl.edu 37 X 152083325 152083325 + Missense_Mutation SNP A A G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_007150.3 +1 reviewed p.K36E 1.000 90 0% 133 17.3% 3 0% probably_damaging(0.998) deleterious(0) deleterious(0.919) NULL FLNA 2316 genome.wustl.edu 37 X 153577918 153577918 + Missense_Mutation SNP C C G novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_001110556.1 -1 reviewed p.S2523T 0.981 114 0% 109 20.2% 915 6.3% benign(0) tolerated(0.16) neutral(0.059) NULL UBL4A 8266 genome.wustl.edu 37 X 153714111 153714111 + Missense_Mutation SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_014235.3 -1 provisional p.R121M 1.000 165 0% 112 33.9% 11 0% possibly_damaging(0.924) deleterious(0) deleterious(0.818) NULL UBL4A 8266 genome.wustl.edu 37 X 153714191 153714191 + Missense_Mutation SNP C C A novel TCGA-D1-A0ZO-01A-11D-A122-09 TCGA-D1-A0ZO-10A-01D-A122-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx e9b9c153-1487-41a6-8443-2dff1d0bf16e aea746b2-c02f-44d5-9709-c77c7a57adef NM_014235.3 -1 provisional p.Q94H 0.000 72 0% 66 12.1% 8 12.5% benign(0) tolerated(0.14) neutral(0.249) NULL