Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID transcript_name strand transcript_status amino_acid_change ucsc_cons normal_depth normal_vaf tumor_depth tumor_vaf rna_depth rna_vaf polyphen sift condel domain ESPN 83715 genome.wustl.edu 37 1 6512126 6512126 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_031475.2 +1 reviewed p.K765N 1.000 11 0% 47 38.3% 223 51.5% probably_damaging(0.984) deleterious(0) deleterious(0.875) NULL UBE4B 10277 genome.wustl.edu 37 1 10190802 10190802 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001105562.1 +1 reviewed p.G614 1.000 63 0% 181 39.2% 2 100% - - - HMMPfam_Ufd2P_core MTOR 2475 genome.wustl.edu 37 1 11189847 11189847 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004958.3 -1 reviewed p.F1888V 1.000 30 0% 104 40.4% 16 56.2% possibly_damaging(0.864) deleterious(0) deleterious(0.779) HMMPfam_FAT,superfamily_ARM-type_fold TMCO4 255104 genome.wustl.edu 37 1 20073669 20073669 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_181719.4 -1 validated p.G200 0.953 43 0% 41 34.1% 20 35% - - - HMMPfam_DUF726 OTUD3 23252 genome.wustl.edu 37 1 20220921 20220921 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015207.1 +1 validated p.R144I 1.000 35 0% 169 43.8% 1 0% probably_damaging(1) tolerated(0.33) deleterious(0.524) HMMPfam_OTU,superfamily_SSF54001 EIF4G3 8672 genome.wustl.edu 37 1 21219989 21219989 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000374933 -1 known p.Q245H 0.044 22 0% 86 34.9% 0 - probably_damaging(0.954) deleterious(0) deleterious(0.842) NULL EPHA8 2046 genome.wustl.edu 37 1 22903143 22903143 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020526.3 +1 reviewed p.R198H 1.000 17 0% 25 48% 0 - probably_damaging(1) tolerated(0.13) deleterious(0.752) HMMPfam_Ephrin_lbd,HMMSmart_EPH_lbd,PatternScan_RECEPTOR_TYR_KIN_V_1,superfamily_Gal_bind_like MYOM3 127294 genome.wustl.edu 37 1 24400740 24400740 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152372.3 -1 validated p.E960* 0.914 38 0% 98 26.5% 0 - - - - HMMSmart_SM00409,superfamily_Immunoglobulin RHCE 6006 genome.wustl.edu 37 1 25747172 25747172 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020485.3 -1 reviewed p.A36T 0.000 75 0% 260 35% 0 - benign(0.005) tolerated(0.81) neutral(0.001) HMMPfam_Ammonium_transp LDLRAP1 26119 genome.wustl.edu 37 1 25891695 25891695 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015627.2 +1 reviewed p.S260L 1.000 53 0% 289 35.3% 15 66.6% probably_damaging(0.996) deleterious(0) deleterious(0.906) NULL FAM54B 56181 genome.wustl.edu 37 1 26153266 26153266 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001099625.1 +1 validated p.E134K 1.000 9 0.000 19 0.421 50 52% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_DUF729 ARID1A 8289 genome.wustl.edu 37 1 27106354 27106354 + Nonsense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006015.4 +1 reviewed p.R1989* 1.000 26 0% 88 37.5% 29 58.6% - - - NULL CSMD2 114784 genome.wustl.edu 37 1 34076791 34076791 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_052896.3 -1 validated p.R2025W 1.000 36 0% 125 37.6% 0 - probably_damaging(0.999) deleterious(0.01) deleterious(0.896) HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain CLSPN 63967 genome.wustl.edu 37 1 36204752 36204752 + Nonsense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_022111.2 -1 reviewed p.R1139* 1.000 25 0% 84 36.9% 2 0% - - - NULL CSF3R 1441 genome.wustl.edu 37 1 36939178 36939178 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_156039.2 -1 reviewed p.C177 0.783 37 0% 47 40.4% 1 0% - - - HMMSmart_FN3,superfamily_FN_III-like GRIK3 2899 genome.wustl.edu 37 1 37285386 37285386 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000831.3 -1 reviewed p.F608L 1.000 54 0% 98 32.7% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Lig_chan,HMMSmart_PBPe,superfamily_SSF53850 MACF1 23499 genome.wustl.edu 37 1 39799307 39799307 + Silent SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_033044.2 +1 reviewed p.V789 0.994 33 0% 68 47.1% 0 - - - - HMMSmart_PLEC,superfamily_SSF75399 MACF1 23499 genome.wustl.edu 37 1 39800846 39800846 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_033044.2 +1 reviewed p.K1302N 0.000 67 0% 90 42.2% 0 - benign(0.079) - - superfamily_SSF75399 PPIE 10450 genome.wustl.edu 37 1 40205860 40205860 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006112.2 +1 reviewed p.D19N 1.000 70 0% 222 35.6% 29 55.1% benign(0.065) deleterious(0) neutral(0.449) HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD HIVEP3 59269 genome.wustl.edu 37 1 42041226 42041226 + Silent SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024503.3 -1 validated p.I1732 1.000 21 0% 102 34.3% 0 - - - - NULL EBNA1BP2 10969 genome.wustl.edu 37 1 43630462 43630462 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006824.2 -1 validated p.R241Q 1.000 31 0% 106 30.2% 68 42.6% possibly_damaging(0.434) deleterious(0.04) deleterious(0.490) HMMPfam_Ebp2 ST3GAL3 6487 genome.wustl.edu 37 1 44290509 44290509 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_174963.2 +1 reviewed p.L121V 0.011 45 0% 148 30.4% 0 - benign(0.092) tolerated(0.42) neutral(0.021) NULL ZSWIM5 57643 genome.wustl.edu 37 1 45484261 45484261 + Missense_Mutation SNP A A T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020883.1 -1 validated p.F1141L 1.000 57 0% 189 40.2% 0 - probably_damaging(0.999) deleterious(0.01) deleterious(0.896) NULL ZSWIM5 57643 genome.wustl.edu 37 1 45484270 45484270 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020883.1 -1 validated p.F1138L 1.000 59 0% 205 39% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL DMBX1 127343 genome.wustl.edu 37 1 46976147 46976147 + Splice_Site SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_172225.1 +1 reviewed e2-1 1.000 21 0% 30 53.3% 0 - - - - - ZFYVE9 9372 genome.wustl.edu 37 1 52703442 52703442 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004799.2 +1 reviewed p.R118I 0.992 26 0% 52 42.3% 0 - probably_damaging(0.992) deleterious(0) deleterious(0.892) NULL ZYG11A 440590 genome.wustl.edu 37 1 53323158 53323158 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000371528 +1 known p.L249I 0.988 29 0% 95 38.9% 0 - benign(0.006) tolerated(0.39) neutral(0.016) superfamily_RNI-like TCEANC2 127428 genome.wustl.edu 37 1 54534497 54534497 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_153035.1 +1 predicted p.E57D 0.978 77 0% 132 37.9% 4 50% benign(0.029) tolerated(0.33) neutral(0.026) HMMSmart_SM00509,HMMPfam_TFIIS,superfamily_Conserved domain common to transcription factors TFIIS elongin A CRSP70 C1orf177 163747 genome.wustl.edu 37 1 55279590 55279590 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001110533.1 +1 validated p.P289L 0.413 70 0% 179 39.1% 0 - probably_damaging(1) deleterious(0.02) deleterious(0.883) NULL C8B 732 genome.wustl.edu 37 1 57399006 57399006 + Splice_Site SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000066.2 -1 reviewed e10+2 1.000 14 0% 23 43.5% 0 - - - - - OMA1 115209 genome.wustl.edu 37 1 59004840 59004840 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_145243.3 -1 provisional p.V43I 0.000 51 0% 123 38.2% 4 50% benign(0) tolerated(1) - NULL MYSM1 114803 genome.wustl.edu 37 1 59155904 59155904 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001085487.1 -1 provisional p.K105T 1.000 194 0% 302 34.1% 0 - probably_damaging(0.978) deleterious(0) deleterious(0.865) NULL L1TD1 54596 genome.wustl.edu 37 1 62673111 62673111 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_019079.4 +1 validated p.D271Y 0.014 79 0% 69 47.8% 0 - unknown(0) deleterious(0.02) - HMMPfam_Transposase_22 L1TD1 54596 genome.wustl.edu 37 1 62675968 62675968 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_019079.4 +1 validated p.E508* 0.001 36 0% 61 37.7% 0 - - - - NULL L1TD1 54596 genome.wustl.edu 37 1 62676462 62676462 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_019079.4 +1 validated p.E672D 0.000 79 0% 86 45.3% 0 - possibly_damaging(0.806) tolerated(0.39) neutral(0.320) HMMPfam_Transposase_22 DOCK7 85440 genome.wustl.edu 37 1 63113405 63113405 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_033407.2 -1 validated p.E259* 1.000 110 0% 231 36.8% 0 - - - - NULL JAK1 3716 genome.wustl.edu 37 1 65332628 65332628 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002227.2 -1 reviewed p.S304L 0.017 51 0% 159 37.1% 14 64.2% benign(0) tolerated(0.3) neutral(0.029) NULL SGIP1 84251 genome.wustl.edu 37 1 67155971 67155971 + Silent SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_032291.2 +1 validated p.S514 0.940 64 0% 119 38.7% 1 0% - - - NULL TCTEX1D1 200132 genome.wustl.edu 37 1 67220427 67220427 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152665.2 +1 validated p.F29C 0.004 48 0% 133 41.4% 1 0% possibly_damaging(0.716) deleterious(0.02) deleterious(0.642) NULL LRRC7 57554 genome.wustl.edu 37 1 70397244 70397244 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020794.2 +1 validated p.F196 1.000 37 0% 86 37.2% 0 - - - - HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00364,HMMSmart_SM00365,superfamily_L domain-like LRRC7 57554 genome.wustl.edu 37 1 70486791 70486791 + Silent SNP C C T rs145241026 by1000genomes TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020794.2 +1 validated p.D470 0.052 27 0% 89 40.4% 0 - probably_damaging(0.999) - - NULL ACADM 34 genome.wustl.edu 37 1 76199306 76199306 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001127328.1 +1 reviewed p.S131Y 1.000 99 0% 393 38.9% 5 60% possibly_damaging(0.931) deleterious(0.01) deleterious(0.783) HMMPfam_Acyl-CoA_dh_N,superfamily_Acyl-CoA dehydrogenase NM domain-like MSH4 4438 genome.wustl.edu 37 1 76354969 76354969 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002440.2 +1 validated p.R714I 1.000 104 0% 179 41.9% 0 - probably_damaging(0.998) tolerated(0.08) deleterious(0.774) HMMPfam_MutS_V,HMMSmart_MUTSac,superfamily_SSF52540 ZZZ3 26009 genome.wustl.edu 37 1 78098979 78098979 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015534.4 -1 provisional p.E21* 1.000 44 0% 54 42.6% 1 100% - - - NULL USP33 23032 genome.wustl.edu 37 1 78194070 78194070 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015017.3 -1 validated p.E380K 1.000 115 0% 289 37.4% 2 100% benign(0.042) deleterious(0.02) neutral(0.386) HMMPfam_UCH,superfamily_Cysteine proteinases PTGFR 5737 genome.wustl.edu 37 1 78959072 78959072 + Missense_Mutation SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000959.3 +1 reviewed p.V215A 0.999 56 0% 167 39.5% 0 - possibly_damaging(0.529) deleterious(0) deleterious(0.623) HMMPfam_7tm_1,superfamily_SSF81321 PTGFR 5737 genome.wustl.edu 37 1 78963588 78963588 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001039585.1 +1 reviewed p.E276D 0.549 124 0% 161 39.8% 0 - benign(0) tolerated(0.43) neutral(0.013) HMMPfam_7tm_1 IFI44L 10964 genome.wustl.edu 37 1 79102721 79102721 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006820.2 +1 validated p.N294T 0.705 66 0% 138 41.3% 3 66.6% benign(0.323) deleterious(0.01) deleterious(0.507) superfamily_P-loop containing nucleoside triphosphate hydrolases LPHN2 23266 genome.wustl.edu 37 1 82421628 82421628 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_012302.2 +1 reviewed p.S617Y 1.000 34 0% 98 35.7% 5 20% possibly_damaging(0.905) tolerated(0.1) deleterious(0.646) NULL DNASE2B 58511 genome.wustl.edu 37 1 84878043 84878043 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_021233.2 +1 reviewed p.L187V 0.987 65 0% 147 44.9% 0 - benign(0.361) tolerated(0.28) neutral(0.146) HMMPfam_DNase_II MCOLN3 55283 genome.wustl.edu 37 1 85486825 85486825 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018298.9 -1 validated p.F485L 1.000 78 0% 147 42.9% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Ion_trans SYDE2 84144 genome.wustl.edu 37 1 85648386 85648386 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_032184.1 -1 validated p.E647* 1.000 103 0% 168 42.3% 0 - - - - NULL SYDE2 84144 genome.wustl.edu 37 1 85648760 85648760 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_032184.1 -1 validated p.S522Y 1.000 52 0% 159 41.5% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) NULL COL24A1 255631 genome.wustl.edu 37 1 86515835 86515835 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152890.5 -1 validated p.A626V 0.277 100 0% 213 42.3% 0 - benign(0) tolerated(0.37) neutral(0.019) NULL ODF2L 57489 genome.wustl.edu 37 1 86850427 86850427 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020729.2 -1 validated p.E102K 0.999 172 0% 193 38.3% 5 40% probably_damaging(0.995) tolerated(1) neutral(0.458) NULL CLCA1 1179 genome.wustl.edu 37 1 86965705 86965705 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001285.3 +1 reviewed p.E908* 0.128 38 0% 44 40.9% 0 - - - - NULL ZNF644 84146 genome.wustl.edu 37 1 91404171 91404171 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_201269.1 -1 validated p.D914N 0.996 43 0% 105 47.6% 1 0% probably_damaging(1) deleterious(0) deleterious(0.945) NULL HFM1 164045 genome.wustl.edu 37 1 91779540 91779540 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001017975.3 -1 validated p.S1073N 1.000 190 0% 187 42.2% 0 - benign(0.136) tolerated(0.25) neutral(0.049) HMMPfam_Sec63 HFM1 164045 genome.wustl.edu 37 1 91861906 91861906 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001017975.3 -1 validated p.S43* 1.000 105 0% 226 41.2% 0 - - - - NULL CDC7 8317 genome.wustl.edu 37 1 91977408 91977408 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001134419.1 +1 reviewed p.R167H 1.000 121 0% 234 42.7% 2 0% possibly_damaging(0.698) tolerated(0.39) neutral(0.267) HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase BRDT 676 genome.wustl.edu 37 1 92479778 92479778 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001726.3 +1 validated p.D931N 1.000 51 0% 115 39.1% 0 - probably_damaging(0.991) deleterious(0) deleterious(0.889) NULL RPL5 6125 genome.wustl.edu 37 1 93306176 93306176 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000969.3 +1 reviewed p.K258N 1.000 47 0% 107 48.6% 2154 48.1% benign(0.297) deleterious(0) deleterious(0.536) NULL ABCA4 24 genome.wustl.edu 37 1 94481340 94481340 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000350.2 -1 reviewed p.S1756Y 0.998 41 0% 76 47.4% 0 - probably_damaging(0.999) deleterious(0.01) deleterious(0.896) NULL ABCD3 5825 genome.wustl.edu 37 1 94972162 94972162 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002858.3 +1 reviewed p.V603 1.000 29 0% 158 39.2% 58 55.1% - - - HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases COL11A1 1301 genome.wustl.edu 37 1 103379940 103379940 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_080629.2 -1 reviewed p.D1328Y 1.000 29 0% 56 44.6% 0 - unknown(0) deleterious(0) - NULL AMY2B 280 genome.wustl.edu 37 1 104115864 104115864 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020978.3 +1 reviewed p.N165K 1.000 245 0% 465 32.7% 2 0% benign(0.192) deleterious(0) neutral(0.463) HMMPfam_Alpha-amylase,HMMSmart_SM00642,superfamily_(Trans)glycosidases LOC126987 126987 genome.wustl.edu 37 1 106623481 106623481 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XM_002342097.1 -1 model p.R193Q 0.081 14 0% 23 39.1% 0 - - - - NULL AKNAD1 254268 genome.wustl.edu 37 1 109395119 109395119 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152763.3 -1 validated p.E56D 0.001 42 0% 148 48% 0 - possibly_damaging(0.822) tolerated(0.38) neutral(0.329) NULL GNAT2 2780 genome.wustl.edu 37 1 110148685 110148685 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005272.3 -1 reviewed p.K209N 1.000 29 0% 127 39.4% 1 0% probably_damaging(0.974) deleterious(0) deleterious(0.861) HMMPfam_G-alpha,HMMSmart_SM00275,superfamily_P-loop containing nucleoside triphosphate hydrolases PHTF1 10745 genome.wustl.edu 37 1 114248492 114248492 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000447664 -1 known p.K321T 0.000 67 0% 109 45% 1 100% benign(0) - - NULL PTPN22 26191 genome.wustl.edu 37 1 114397639 114397639 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015967.4 -1 reviewed p.K191N 1.000 43 0% 133 42.9% 0 - probably_damaging(0.987) tolerated(0.11) deleterious(0.708) HMMPfam_Y_phosphatase,HMMSmart_PTPc,superfamily_SSF52799 TSHB 7252 genome.wustl.edu 37 1 115576655 115576655 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000549.3 +1 reviewed p.R75I 0.987 48 0% 139 43.9% 0 - benign(0.347) deleterious(0.01) deleterious(0.516) HMMSmart_SM00068,HMMPfam_Cys_knot,superfamily_Cystine-knot cytokines HAO2 51179 genome.wustl.edu 37 1 119927408 119927408 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001005783.1 +1 reviewed p.A98V 0.675 13 0% 31 45.2% 0 - benign(0.038) tolerated(0.06) neutral(0.325) HMMPfam_FMN_dh,superfamily_FMN-linked oxidoreductases FCGR1B 2210 genome.wustl.edu 37 1 120927355 120927355 + Missense_Mutation SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001017986.2 -1 validated p.F209L 0.237 109 0% 278 19.8% 3 0% probably_damaging(0.973) deleterious(0.02) deleterious(0.798) NULL PSMB4 5692 genome.wustl.edu 37 1 151372509 151372509 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002796.2 +1 reviewed p.V65L 1.000 20 0% 44 59.1% 465 94.8% possibly_damaging(0.928) deleterious(0.01) deleterious(0.781) HMMPfam_Proteasome,PatternScan_PROTEASOME_B,superfamily_SSF56235 HRNR 388697 genome.wustl.edu 37 1 152193869 152193869 + Missense_Mutation SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001009931.1 -1 validated p.F79S 0.984 82 0% 246 40.7% 0 - probably_damaging(0.999) - - superfamily_SSF47473 FLG2 388698 genome.wustl.edu 37 1 152328228 152328228 + Silent SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001014342.2 -1 provisional p.S678 0.000 67 0% 259 39.8% 0 - - - - NULL LCE2D 353141 genome.wustl.edu 37 1 152636864 152636864 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_178430.2 +1 validated p.E95* 0.000 26 0% 58 79.3% 0 - - - - NULL CRTC2 200186 genome.wustl.edu 37 1 153920640 153920640 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_181715.1 -1 provisional p.A676V 1.000 28 0% 70 32.9% 101 43.5% benign(0.135) tolerated(0.08) neutral(0.311) NULL NUP210L 91181 genome.wustl.edu 37 1 154042914 154042914 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_207308.2 -1 validated p.V797F 0.998 43 0% 175 38.3% 0 - probably_damaging(0.974) tolerated(0.27) neutral(0.450) NULL PAQR6 79957 genome.wustl.edu 37 1 156215385 156215385 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024897.2 -1 provisional p.F45L 0.996 9 0.000 9 0.556 3 100% benign(0) tolerated(0.61) neutral(0.004) HMMPfam_HlyIII PEX19 5824 genome.wustl.edu 37 1 160253413 160253413 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002857.3 -1 reviewed p.F29 1.000 52 0% 118 76.3% 5 100% - - - NULL FMO4 2329 genome.wustl.edu 37 1 171302015 171302015 + Silent SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002022.1 +1 reviewed p.N265 1.000 69 0% 174 41.4% 0 - - - - HMMPfam_FMO-like HMCN1 83872 genome.wustl.edu 37 1 185985299 185985299 + Nonsense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_031935.2 +1 reviewed p.R1707* 0.789 32 0% 77 74% 0 - - - - HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin ASPM 259266 genome.wustl.edu 37 1 197070282 197070282 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018136.4 -1 reviewed p.R2700Q 1.000 35 0% 29 82.8% 0 - probably_damaging(0.999) deleterious(0.01) deleterious(0.896) HMMPfam_IQ,HMMSmart_SM00015,superfamily_P-loop containing nucleoside triphosphate hydrolases PIK3C2B 5287 genome.wustl.edu 37 1 204425072 204425072 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002646.3 -1 reviewed p.D619Y 0.003 17 0% 41 82.9% 0 - benign(0) deleterious(0.04) neutral(0.349) HMMSmart_SM00142 SRGAP2 23380 genome.wustl.edu 37 1 206610339 206610339 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015326.2 +1 validated p.G442R 1.000 96 0% 270 44.8% 2 0% probably_damaging(1) deleterious(0) deleterious(0.945) NULL CR1L 1379 genome.wustl.edu 37 1 207890813 207890813 + Silent SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_175710.1 +1 validated p.I473 0.547 84 0% 184 37% 2 0% - - - superfamily_Complement control module/SCR domain CENPF 1063 genome.wustl.edu 37 1 214818329 214818329 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_016343.3 +1 reviewed p.E1806* 0.565 27 0% 47 40.4% 1 0% - - - NULL LBR 3930 genome.wustl.edu 37 1 225611635 225611635 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002296.2 -1 reviewed p.E48A 0.920 65 0% 185 41.6% 2 50% benign(0.06) tolerated(0.15) neutral(0.245) HMMSmart_TUDOR,HMMPfam_LBR_tudor ITPKB 3707 genome.wustl.edu 37 1 226923648 226923648 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002221.3 -1 reviewed p.G504 0.001 22 0% 33 66.7% 6 83.3% - - - NULL ITPKB 3707 genome.wustl.edu 37 1 226924666 226924666 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002221.3 -1 reviewed p.R165H 0.998 14 0% 18 94.4% 4 100% possibly_damaging(0.441) deleterious(0) deleterious(0.589) NULL FAM89A 375061 genome.wustl.edu 37 1 231155813 231155813 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_198552.2 -1 validated p.S117 0.938 9 0.000 36 0.472 3 0% - - - NULL C1orf131 128061 genome.wustl.edu 37 1 231360044 231360044 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152379.2 -1 validated p.S288Y 1.000 84 0% 204 78.9% 11 90.9% probably_damaging(0.998) deleterious(0.01) deleterious(0.880) NULL ERO1LB 56605 genome.wustl.edu 37 1 236384239 236384239 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_019891.3 -1 validated p.K412N 1.000 80 0% 210 80% 2 100% probably_damaging(0.987) deleterious(0) deleterious(0.881) HMMPfam_ERO1,superfamily_ERO1 RYR2 6262 genome.wustl.edu 37 1 237787125 237787125 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001035.2 +1 reviewed p.R1993C 0.997 82 0% 226 40.3% 0 - probably_damaging(0.998) - - NULL RYR2 6262 genome.wustl.edu 37 1 237791238 237791238 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001035.2 +1 reviewed p.R2100W 0.995 45 0% 108 82.4% 0 - probably_damaging(0.974) - - NULL C1orf101 257044 genome.wustl.edu 37 1 244803309 244803309 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001130957.1 +1 validated p.R928W 0.001 125 0% 472 83.5% 3 100% benign(0) tolerated(0.12) neutral(0.261) NULL ZNF670 93474 genome.wustl.edu 37 1 247200935 247200935 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_033213.2 -1 validated p.R329K 0.994 104 0% 210 44.3% 4 75% benign(0.045) tolerated(0.21) neutral(0.046) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 SH3YL1 26751 genome.wustl.edu 37 2 229928 229928 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000431160 -1 known p.I229M 0.121 33 0% 98 42.9% 0 - benign(0.006) deleterious(0.01) neutral(0.406) NULL MYT1L 23040 genome.wustl.edu 37 2 1805566 1805566 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015025.2 -1 validated p.E1058* 1.000 280 0.4% 506 37.5% 0 - - - - NULL ATP6V1C2 245973 genome.wustl.edu 37 2 10912016 10912016 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001039362.1 +1 reviewed p.F174 0.989 35 0% 89 37.1% 3 100% - - - HMMPfam_V-ATPase_C GEN1 348654 genome.wustl.edu 37 2 17963129 17963129 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001130009.1 +1 validated p.E884* 0.000 35 0% 80 35% 0 - - - - NULL OSR1 130497 genome.wustl.edu 37 2 19552980 19552980 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_145260.2 -1 validated p.T196M 1.000 41 0% 100 43% 3 66.6% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 APOB 338 genome.wustl.edu 37 2 21230633 21230633 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000384.2 -1 reviewed p.S3036Y 0.998 29 0% 46 37% 0 - probably_damaging(1) - - NULL NCOA1 8648 genome.wustl.edu 37 2 24896324 24896324 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003743.4 +1 reviewed p.L116I 1.000 43 2.3% 172 39.5% 2 100% probably_damaging(0.999) deleterious(0.01) deleterious(0.896) HMMSmart_SM00091,HMMPfam_PAS,superfamily_PYP-like sensor domain (PAS domain) NCOA1 8648 genome.wustl.edu 37 2 24930613 24930613 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003743.4 +1 reviewed p.K758N 1.000 74 0% 118 44.9% 4 50% probably_damaging(1) tolerated(0.16) deleterious(0.559) NULL CENPO 79172 genome.wustl.edu 37 2 25039552 25039552 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024322.1 +1 provisional p.R211I 1.000 26 0% 100 36% 0 - probably_damaging(0.999) tolerated(0.05) deleterious(0.836) NULL GPR113 165082 genome.wustl.edu 37 2 26540976 26540976 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001145168.1 -1 validated p.A65V 0.009 45 0% 83 51.8% 0 - benign(0.023) deleterious(0.02) neutral(0.384) NULL OTOF 9381 genome.wustl.edu 37 2 26688698 26688698 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_194248.2 -1 reviewed p.I1547 0.998 46 0% 117 35% 0 - - - - HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB) AGBL5 60509 genome.wustl.edu 37 2 27278556 27278556 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_021831.5 +1 validated p.D305E 1.000 19 0% 39 33.3% 58 51.7% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Peptidase_M14,superfamily_Zn-dependent exopeptidases GPN1 11321 genome.wustl.edu 37 2 27853899 27853899 + Missense_Mutation SNP C C T rs183551437 by1000genomes TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_007266.3 +1 reviewed p.R85C 1.000 177 0% 296 36.8% 8 25% probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_AAA,HMMPfam_ATP_bind_1,superfamily_SSF52540 BRE 9577 genome.wustl.edu 37 2 28352238 28352238 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004899.3 +1 validated p.R224Q 1.000 52 0% 187 39% 37 48.6% possibly_damaging(0.733) tolerated(0.09) deleterious(0.565) HMMPfam_BRE SPDYA 245711 genome.wustl.edu 37 2 29045265 29045265 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001142634.1 +1 validated p.F123L 1.000 341 0% 399 44.4% 0 - probably_damaging(0.999) tolerated(0.06) deleterious(0.813) NULL WDR43 23160 genome.wustl.edu 37 2 29169592 29169592 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015131.1 +1 validated p.E661* 0.983 98 0% 188 41.5% 21 23.8% - - - NULL LCLAT1 253558 genome.wustl.edu 37 2 30863262 30863262 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_182551.3 +1 validated p.R341K 1.000 70 0% 177 52% 2 0% benign(0.041) deleterious(0) neutral(0.447) NULL MEMO1 51072 genome.wustl.edu 37 2 32145888 32145888 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015955.2 -1 validated p.D102Y 1.000 45 0% 78 28.2% 16 31.2% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Memo CEBPZ 10153 genome.wustl.edu 37 2 37454714 37454714 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005760.2 -1 validated p.S541L 1.000 21 0% 61 36.1% 16 25% probably_damaging(0.997) deleterious(0.03) deleterious(0.831) HMMPfam_CBF,superfamily_ARM repeat MAP4K3 8491 genome.wustl.edu 37 2 39487797 39487797 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003618.2 -1 reviewed p.R753Q 1.000 34 0% 140 36.4% 9 44.4% benign(0.012) tolerated(0.33) neutral(0.025) HMMPfam_CNH,HMMSmart_SM00036 MAP4K3 8491 genome.wustl.edu 37 2 39492422 39492422 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003618.2 -1 reviewed p.K686N 1.000 81 0% 98 49% 4 25% probably_damaging(1) tolerated(0.1) deleterious(0.786) HMMPfam_CNH,HMMSmart_SM00036 THADA 63892 genome.wustl.edu 37 2 43458127 43458127 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001083953.1 -1 validated p.S1941L 0.000 24 0% 72 33.3% 53 41.5% benign(0.002) tolerated(0.08) neutral(0.300) NULL SOCS5 9655 genome.wustl.edu 37 2 46985888 46985888 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014011.4 +1 reviewed p.K73N 0.748 65 0% 103 42.7% 2 0% benign(0.15) tolerated(0.06) neutral(0.336) NULL SPTBN1 6711 genome.wustl.edu 37 2 54839406 54839406 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003128.2 +1 reviewed p.D137Y 1.000 15 0% 65 46.2% 5 20% probably_damaging(1) deleterious(0) deleterious(0.945) PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain USP34 9736 genome.wustl.edu 37 2 61538990 61538990 + Silent SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014709.3 -1 validated p.L1200 1.000 37 0% 89 39.3% 2 0% - - - NULL LOC100129162 100129162 genome.wustl.edu 37 2 62780138 62780138 + Nonsense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XM_001725437.1 -1 model p.R178* 0.405 13 0% 21 42.9% 0 - - - - NULL CLEC4F 165530 genome.wustl.edu 37 2 71043127 71043127 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_173535.2 -1 validated p.Q462H 0.284 84 0% 172 39% 0 - benign(0.051) tolerated(0.17) neutral(0.062) NULL ATP6V1B1 525 genome.wustl.edu 37 2 71170845 71170845 + Splice_Site SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001692.3 +1 reviewed e2+2 1.000 26 0% 70 40% 0 - - - - - ZNF638 27332 genome.wustl.edu 37 2 71576839 71576839 + Missense_Mutation SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001014972.1 +1 reviewed p.V252A 0.996 47 0% 105 36.2% 4 75% probably_damaging(0.988) deleterious(0) deleterious(0.882) NULL DYSF 8291 genome.wustl.edu 37 2 71816813 71816813 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001130987.1 +1 reviewed p.D1165N 1.000 46 0% 106 37.7% 2 0% probably_damaging(0.994) tolerated(0.4) neutral(0.468) superfamily_C2_CaLB CYP26B1 56603 genome.wustl.edu 37 2 72359652 72359652 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_019885.2 -1 reviewed p.D415N 1.000 13 0% 32 31.2% 0 - possibly_damaging(0.845) deleterious(0) deleterious(0.768) HMMPfam_p450,superfamily_Cytochrome_P450 SMYD5 10322 genome.wustl.edu 37 2 73446016 73446016 + Missense_Mutation SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006062.2 +1 validated p.I42V 1.000 29 0% 101 25.7% 9 44.4% benign(0.116) tolerated(0.1) neutral(0.295) HMMSmart_SET,superfamily_SSF82199 STAMBP 10617 genome.wustl.edu 37 2 74076600 74076600 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006463.3 +1 reviewed p.L285I 1.000 25 0% 86 36% 32 59.3% probably_damaging(0.992) deleterious(0) deleterious(0.892) HMMPfam_Mov34,HMMSmart_JAB_MPN,superfamily_SSF102712 GCFC2 6936 genome.wustl.edu 37 2 75897329 75897329 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003203.4 -1 validated p.R680C 1.000 57 0% 114 33.3% 7 28.5% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_GCFC GCFC2 6936 genome.wustl.edu 37 2 75923336 75923336 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003203.4 -1 validated p.L275V 0.905 150 0% 151 38.4% 1 0% probably_damaging(0.991) deleterious(0.01) deleterious(0.850) HMMPfam_GCFC GCFC2 6936 genome.wustl.edu 37 2 75928322 75928322 + Silent SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003203.4 -1 validated p.I237 0.364 154 0% 377 39.8% 3 33.3% - - - NULL POLR1A 25885 genome.wustl.edu 37 2 86327173 86327173 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015425.3 -1 validated p.C67F 1.000 34 0% 97 38.1% 2 100% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_RNA_pol_Rpb1_1,superfamily_beta and beta-prime subunits of DNA dependent RNA-polymerase CHMP3 51652 genome.wustl.edu 37 2 86737492 86737492 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_016079.2 -1 reviewed p.E133* 1.000 24 0% 106 42.5% 50 6% - - - HMMPfam_Snf7 IGKV2-24 28923 genome.wustl.edu 37 2 89475932 89475932 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000484817 -1 known p.F80L 0.001 44 0% 147 37.4% 0 - benign(0) tolerated(0.71) neutral(0.002) HMMSmart_SM00406,HMMPfam_V-set,superfamily_Immunoglobulin IGKV1D-16 28901 genome.wustl.edu 37 2 90139147 90139147 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000492446 +1 known p.L15F 0.971 38 0% 148 31.8% 0 - benign(0.229) tolerated(0.13) neutral(0.276) NULL LMAN2L 81562 genome.wustl.edu 37 2 97400201 97400201 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000434865 -1 known p.E84* 1.000 69 0% 275 37.5% 13 38.4% - - - NULL FAHD2B 151313 genome.wustl.edu 37 2 97757409 97757409 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_199336.1 -1 provisional p.A12V 0.757 35 0% 85 48.2% 1 0% benign(0.001) tolerated(0.18) neutral(0.056) NULL ANKRD36B 57730 genome.wustl.edu 37 2 98156527 98156527 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_025190.3 -1 provisional p.E421* 0.000 206 0% 188 35.1% 0 - - - - NULL TMEM131 23505 genome.wustl.edu 37 2 98373825 98373825 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015348.1 -1 validated p.G1797S 0.977 86 0% 189 40.2% 120 49.1% benign(0) tolerated(0.49) neutral(0.011) NULL TMEM131 23505 genome.wustl.edu 37 2 98430749 98430749 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015348.1 -1 validated p.A465 0.487 48 0% 123 41.5% 3 66.6% - - - NULL RGPD3 653489 genome.wustl.edu 37 2 107040008 107040008 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001144013.1 -1 validated p.S1472Y 0.001 70 0% 50 30% 1 0% benign(0.205) deleterious(0.04) neutral(0.369) NULL RGPD3 653489 genome.wustl.edu 37 2 107040325 107040325 + Silent SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001144013.1 -1 validated p.R1366 0.995 127 0% 190 42.1% 0 - - - - HMMPfam_Ran_BP1,HMMSmart_RanBD,superfamily_SSF50729 GCC2 9648 genome.wustl.edu 37 2 109099602 109099602 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_181453.3 +1 reviewed p.E1144* 1.000 110 0% 147 28.6% 1 100% - - - NULL RANBP2 5903 genome.wustl.edu 37 2 109381105 109381105 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006267.4 +1 reviewed p.K1370N 0.696 28 0% 81 43.2% 3 33.3% benign(0.05) - - HMMPfam_zf-RanBP,HMMSmart_ZnF_RBZ,PatternScan_ZF_RANBP2_1 DPP10 57628 genome.wustl.edu 37 2 116572518 116572518 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020868.3 +1 validated p.R617Q 0.996 51 0% 155 36.8% 0 - benign(0.179) tolerated(0.11) neutral(0.288) HMMPfam_Peptidase_S9,superfamily_alpha/beta-Hydrolases CLASP1 23332 genome.wustl.edu 37 2 122162009 122162009 + Nonsense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015282.2 -1 validated p.R891* 1.000 59 0% 112 40.2% 4 0% - - - superfamily_ARM repeat WDR33 55339 genome.wustl.edu 37 2 128522061 128522061 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001006622.1 -1 reviewed p.E323* 1.000 79 0% 77 39% 0 - - - - NULL AMMECR1L 83607 genome.wustl.edu 37 2 128627099 128627099 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_031445.2 -1 validated p.R218Q 1.000 52 0% 127 40.2% 2 0% benign(0.175) tolerated(0.08) neutral(0.316) HMMPfam_AMMECR1 UGGT1 56886 genome.wustl.edu 37 2 128937366 128937366 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020120.3 +1 validated p.M1274I 1.000 79 0% 224 39.3% 8 25% probably_damaging(0.999) deleterious(0) deleterious(0.935) superfamily_Nucleotide-diphospho-sugar transferases POTEF 728378 genome.wustl.edu 37 2 130833023 130833023 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001099771.2 -1 validated p.K674N 0.044 114 0% 180 43.9% 0 - possibly_damaging(0.873) deleterious(0) deleterious(0.784) NULL POTEE 445582 genome.wustl.edu 37 2 131984493 131984493 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001083538.1 +1 validated p.R303I 0.001 326 0% 403 38.5% 0 - possibly_damaging(0.681) deleterious(0) deleterious(0.688) HMMPfam_Ank,superfamily_Ankyrin repeat LOC150786 150786 genome.wustl.edu 37 2 132120889 132120889 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001077637.1 -1 validated p.Q135H 1.000 143 0% 509 41.7% 0 - - - - HMMSmart_RAB,HMMPfam_Ras,superfamily_SSF52540 NCKAP5 344148 genome.wustl.edu 37 2 133540708 133540708 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_207363.2 -1 validated p.E1226K 0.075 35 0% 111 41.4% 1 0% possibly_damaging(0.888) deleterious(0.02) deleterious(0.730) NULL NCKAP5 344148 genome.wustl.edu 37 2 133543089 133543089 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_207363.2 -1 validated p.S432L 1.000 54 0% 171 12.9% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL NCKAP5 344148 genome.wustl.edu 37 2 133751790 133751790 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_207363.2 -1 validated p.L122I 1.000 119 0% 279 37.6% 0 - probably_damaging(0.98) deleterious(0) deleterious(0.869) NULL YSK4 80122 genome.wustl.edu 37 2 135741333 135741333 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_025052.3 -1 validated p.K1045N 0.853 64 0% 133 37.6% 5 0% benign(0.047) deleterious(0.04) neutral(0.352) superfamily_Protein kinase-like (PK-like) YSK4 80122 genome.wustl.edu 37 2 135743405 135743405 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_025052.3 -1 validated p.E1013* 0.038 95 0% 255 45.1% 5 20% - - - NULL LRP1B 53353 genome.wustl.edu 37 2 141660576 141660576 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018557.2 -1 validated p.V1227L 1.000 36 0% 112 42.9% 0 - benign(0.009) tolerated(0.71) neutral(0.002) HMMSmart_EGF,superfamily_SSF57196 ZEB2 9839 genome.wustl.edu 37 2 145158777 145158777 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014795.3 -1 reviewed p.R302Q 1.000 30 0% 154 38.3% 1 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 NEB 4703 genome.wustl.edu 37 2 152566195 152566195 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004543.4 -1 reviewed p.K337T 1.000 62 0% 268 39.2% 0 - probably_damaging(0.999) deleterious(0.01) deleterious(0.896) HMMPfam_Nebulin,HMMSmart_SM00227 WDSUB1 151525 genome.wustl.edu 37 2 160105008 160105008 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001128212.1 -1 validated p.R383H 0.998 56 0% 189 36% 4 50% probably_damaging(1) deleterious(0.05) deleterious(0.845) HMMSmart_SM00454,superfamily_SAM/Pointed domain,HMMPfam_SAM_2 BAZ2B 29994 genome.wustl.edu 37 2 160255348 160255348 + Nonsense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_013450.2 -1 validated p.R986* 1.000 87 0% 304 33.6% 1 0% - - - NULL MARCH7 64844 genome.wustl.edu 37 2 160585683 160585683 + Nonsense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_022826.2 +1 validated p.Y50* 1.000 49 0% 88 36.4% 4 25% - - - NULL LY75 4065 genome.wustl.edu 37 2 160661611 160661611 + Nonsense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002349.2 -1 validated p.R1705* 1.000 41 0% 115 38.3% 23 65.2% - - - NULL LY75 4065 genome.wustl.edu 37 2 160661723 160661723 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002349.2 -1 validated p.Y1667 1.000 41 0% 122 34.4% 25 40% - - - NULL LY75 4065 genome.wustl.edu 37 2 160676425 160676425 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002349.2 -1 validated p.S1322Y 0.991 52 0% 172 39.5% 3 33.3% probably_damaging(0.998) deleterious(0.02) deleterious(0.857) HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like PLA2R1 22925 genome.wustl.edu 37 2 160825840 160825840 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_007366.3 -1 validated p.Q897H 0.999 76 0% 227 41% 3 66.6% probably_damaging(0.996) tolerated(0.47) deleterious(0.473) HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like FAP 2191 genome.wustl.edu 37 2 163076434 163076434 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004460.2 -1 reviewed p.E139* 0.927 37 0% 91 36.3% 0 - - - - HMMPfam_DPPIV_N,superfamily_SSF82171 GRB14 2888 genome.wustl.edu 37 2 165383646 165383646 + Splice_Site SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004490.2 -1 reviewed e4-1 1.000 144 0% 165 38.2% 0 - - - - - SCN3A 6328 genome.wustl.edu 37 2 165947005 165947005 + Silent SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006922.3 -1 reviewed p.V1886 1.000 94 0% 106 34.9% 0 - - - - NULL TTC21B 79809 genome.wustl.edu 37 2 166737279 166737279 + Missense_Mutation SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024753.3 -1 validated p.Y1239H 1.000 33 0% 163 36.2% 9 33.3% benign(0.023) tolerated(0.22) neutral(0.043) superfamily_TPR-like SCN7A 6332 genome.wustl.edu 37 2 167333982 167333982 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002976.2 -1 validated p.K75N 0.013 55 0% 104 48.1% 0 - benign(0.003) tolerated(1) - superfamily_Voltage-gated potassium channels XIRP2 129446 genome.wustl.edu 37 2 167760210 167760210 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152381.4 +1 validated p.S73L 0.000 41 0% 81 34.6% 0 - benign(0) deleterious(0.02) neutral(0.383) NULL XIRP2 129446 genome.wustl.edu 37 2 168100928 168100928 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152381.4 +1 validated p.I1009S 0.999 35 0% 67 43.3% 0 - probably_damaging(0.996) deleterious(0) deleterious(0.906) NULL XIRP2 129446 genome.wustl.edu 37 2 168114854 168114854 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001079810.2 +1 validated p.L600V 0.000 45 0% 57 35.1% 0 - possibly_damaging(0.8) tolerated(0.1) deleterious(0.587) NULL G6PC2 57818 genome.wustl.edu 37 2 169764535 169764535 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_021176.2 +1 reviewed p.F338L 0.710 63 0% 195 40% 0 - benign(0) tolerated(1) - NULL LRP2 4036 genome.wustl.edu 37 2 170028611 170028611 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004525.2 -1 reviewed p.R3726H 1.000 18 0% 68 25% 2 50% probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMPfam_Ldl_recept_a,HMMSmart_LDLa,superfamily_LDL_rcpt_classA_cys-rich C2orf77 129881 genome.wustl.edu 37 2 170506893 170506893 + Silent SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001085447.1 -1 validated p.K366 0.931 256 0% 476 37.2% 8 50% - - - NULL C2orf77 129881 genome.wustl.edu 37 2 170518917 170518917 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001085447.1 -1 validated p.R231I 0.009 263 0% 396 40.7% 2 100% benign(0.039) tolerated(0.2) neutral(0.051) NULL SSB 6741 genome.wustl.edu 37 2 170663556 170663556 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003142.3 +1 provisional p.E177* 1.000 132 0% 266 39.5% 16 6.2% - - - HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD MYO3B 140469 genome.wustl.edu 37 2 171258191 171258191 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_138995.3 +1 validated p.E707K 1.000 24 0% 41 43.9% 0 - benign(0) tolerated(0.83) neutral(0.001) HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases ITGA6 3655 genome.wustl.edu 37 2 173349579 173349579 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001079818.1 +1 reviewed p.R540Q 0.998 23 0% 33 42.4% 12 100% benign(0.167) tolerated(0.39) neutral(0.031) HMMPfam_Integrin_alpha2,superfamily_Integrin domains ITGA6 3655 genome.wustl.edu 37 2 173354279 173354279 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001079818.1 +1 reviewed p.E858* 1.000 75 0% 127 46.5% 14 14.2% - - - HMMPfam_Integrin_alpha2,superfamily_Integrin domains PDK1 5163 genome.wustl.edu 37 2 173429748 173429748 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002610.3 +1 reviewed p.R213Q 1.000 78 0% 202 43.6% 3 33.3% benign(0.003) tolerated(0.11) neutral(0.272) superfamily_ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase,HMMPfam_BCDHK_Adom3 RBM45 129831 genome.wustl.edu 37 2 178990818 178990818 + Nonsense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000424099 +1 known p.W45* 1.000 103 0% 190 33.7% 17 64.7% probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_RNA-binding domain RBD OSBPL6 114880 genome.wustl.edu 37 2 179247254 179247254 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000357080 +1 known p.F480 0.003 25 0% 82 31.7% 0 - - - - NULL PLEKHA3 65977 genome.wustl.edu 37 2 179367202 179367202 + Silent SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000421187 +1 known p.I114 0.002 47 0% 24 37.5% 0 - - - - NULL TTN 7273 genome.wustl.edu 37 2 179411451 179411451 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000356127 -1 known p.F28998L 1.000 15 0% 32 28.1% 0 - possibly_damaging(0.77) - - HMMPfam_fn3,HMMSmart_SM00060 TTN 7273 genome.wustl.edu 37 2 179416614 179416614 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000356127 -1 known p.S27768Y 1.000 59 0% 115 40.9% 0 - probably_damaging(0.991) - - HMMPfam_fn3,HMMSmart_SM00060 TTN 7273 genome.wustl.edu 37 2 179418274 179418274 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000356127 -1 known p.E27250* 1.000 35 0% 59 30.5% 1 100% - - - HMMPfam_fn3 TTN 7273 genome.wustl.edu 37 2 179434109 179434109 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000356127 -1 known p.E23014* 1.000 38 0% 56 46.4% 0 - - - - HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set TTN 7273 genome.wustl.edu 37 2 179593354 179593354 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000356127 -1 known p.M5189I 1.000 71 0% 74 41.9% 0 - unknown(0) - - HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set TTN 7273 genome.wustl.edu 37 2 179602935 179602935 + Nonsense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000356127 -1 known p.R3505* 0.874 18 0% 44 22.7% 0 - - - - HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set TTN 7273 genome.wustl.edu 37 2 179606598 179606598 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000342175 -1 known p.E3617K 0.284 64 0% 73 35.6% 0 - possibly_damaging(0.539) - - NULL TTN 7273 genome.wustl.edu 37 2 179611243 179611243 + Missense_Mutation SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_133379.3 -1 reviewed p.D5295G 1.000 36 0% 74 45.9% 0 - probably_damaging(0.981) deleterious(0) deleterious(0.870) NULL TTN 7273 genome.wustl.edu 37 2 179613947 179613947 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_133379.3 -1 reviewed p.E4394* 0.095 123 0% 67 46.3% 0 - - - - NULL TTN 7273 genome.wustl.edu 37 2 179631337 179631337 + Silent SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_133379.3 -1 reviewed p.V3158 0.984 26 0% 73 27.4% 0 - - - - HMMSmart_IG,HMMPfam_I-set,superfamily_SSF48726 TTN 7273 genome.wustl.edu 37 2 179632555 179632555 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_133379.3 -1 reviewed p.N3134 1.000 37 0% 94 37.2% 0 - - - - HMMSmart_IG,HMMPfam_I-set,superfamily_SSF48726 TTN 7273 genome.wustl.edu 37 2 179632845 179632845 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_133379.3 -1 reviewed p.I3067M 0.998 35 0% 144 43.8% 0 - possibly_damaging(0.741) - - HMMSmart_IG,HMMPfam_I-set,superfamily_SSF48726 TTN 7273 genome.wustl.edu 37 2 179633572 179633572 + Silent SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_133379.3 -1 reviewed p.I2997 1.000 78 0% 293 42.3% 0 - - - - HMMSmart_IG,HMMPfam_I-set,superfamily_SSF48726 CCDC141 285025 genome.wustl.edu 37 2 179742769 179742769 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_173648.2 -1 provisional p.E32D 0.020 77 0% 153 9.8% 0 - benign(0.076) tolerated(0.14) neutral(0.255) NULL ITGA4 3676 genome.wustl.edu 37 2 182394329 182394329 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000885.4 +1 reviewed p.S831Y 1.000 62 0% 185 42.7% 0 - probably_damaging(0.957) tolerated(0.06) deleterious(0.723) HMMPfam_Integrin_alpha2,superfamily_Integrin domains DNAJC10 54431 genome.wustl.edu 37 2 183621186 183621186 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018981.1 +1 provisional p.R600I 1.000 43 0% 153 47.7% 127 47.2% benign(0.23) deleterious(0.01) neutral(0.429) superfamily_Thioredoxin-like,HMMPfam_Thioredoxin ZNF804A 91752 genome.wustl.edu 37 2 185801374 185801374 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_194250.1 +1 provisional p.F417L 0.001 42 0% 83 42.2% 0 - benign(0) tolerated(1) - NULL CALCRL 10203 genome.wustl.edu 37 2 188245470 188245470 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005795.4 -1 validated p.D77N 0.987 16 0% 76 34.2% 1 0% possibly_damaging(0.841) deleterious(0.02) deleterious(0.705) HMMPfam_HRM,HMMSmart_HormR,PatternScan_G_PROTEIN_RECEP_F2_1,superfamily_SSF111418 TMEFF2 23671 genome.wustl.edu 37 2 192862995 192862995 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_016192.2 -1 provisional p.D246E 1.000 143 0% 251 39.4% 0 - possibly_damaging(0.722) tolerated(0.58) neutral(0.267) NULL DNAH7 56171 genome.wustl.edu 37 2 196737151 196737151 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018897.2 -1 validated p.I2152 0.987 56 0% 154 39.6% 1 0% - - - superfamily_P-loop containing nucleoside triphosphate hydrolases STK17B 9262 genome.wustl.edu 37 2 197002227 197002227 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004226.3 -1 validated p.R355C 1.000 70 0% 174 43.1% 7 42.8% probably_damaging(1) deleterious(0) deleterious(0.945) NULL HECW2 57520 genome.wustl.edu 37 2 197085594 197085594 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020760.1 -1 provisional p.I1406 0.990 72 0% 318 40.9% 0 - - - - HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain SF3B1 23451 genome.wustl.edu 37 2 198265007 198265007 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_012433.2 -1 reviewed p.R957Q 1.000 86 0% 130 46.2% 105 49.5% probably_damaging(0.997) tolerated(0.09) deleterious(0.762) HMMPfam_HEAT,superfamily_ARM repeat PLCL1 5334 genome.wustl.edu 37 2 198949139 198949139 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006226.3 +1 validated p.E202K 0.914 76 0% 108 40.7% 0 - benign(0) tolerated(1) - superfamily_SSF47473 ALS2CR12 130540 genome.wustl.edu 37 2 202172323 202172323 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000415745 -1 known p.S41L 1.000 90 0% 210 43.3% 1 0% - - - NULL DYTN 391475 genome.wustl.edu 37 2 207530685 207530685 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001093730.1 -1 provisional p.R350I 0.012 137 0% 468 40.4% 0 - possibly_damaging(0.852) deleterious(0.01) deleterious(0.733) NULL PIKFYVE 200576 genome.wustl.edu 37 2 209136403 209136403 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015040.3 +1 reviewed p.R54C 1.000 117 0% 238 35.3% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) NULL UNC80 285175 genome.wustl.edu 37 2 210707151 210707151 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_032504.1 +1 validated p.E1147D 1.000 84 0% 204 38.2% 0 - possibly_damaging(0.945) deleterious(0.02) deleterious(0.772) NULL UNC80 285175 genome.wustl.edu 37 2 210808169 210808169 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_032504.1 +1 validated p.F2261L 1.000 32 0% 137 37.2% 0 - possibly_damaging(0.94) deleterious(0) deleterious(0.830) NULL ERBB4 2066 genome.wustl.edu 37 2 212488718 212488718 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005235.2 -1 reviewed p.R711C 1.000 66 0% 149 36.9% 2 100% probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_Protein kinase-like (PK-like) ABCA12 26154 genome.wustl.edu 37 2 215798877 215798877 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_173076.2 -1 reviewed p.I2535M 1.000 52 0% 128 43% 2 50% possibly_damaging(0.868) deleterious(0) deleterious(0.782) NULL ABCA12 26154 genome.wustl.edu 37 2 215910723 215910723 + Missense_Mutation SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_173076.2 -1 reviewed p.N237S 0.980 54 0% 122 36.9% 0 - benign(0) tolerated(0.14) neutral(0.249) NULL PLCD4 84812 genome.wustl.edu 37 2 219498505 219498505 + Missense_Mutation SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000457426 +1 known p.M193V 0.000 43 0% 86 39.5% 0 - - - - HMMSmart_SM00149 FARSB 10056 genome.wustl.edu 37 2 223504322 223504322 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005687.3 -1 reviewed p.E144D 1.000 69 0% 168 39.3% 8 87.5% benign(0.002) tolerated(1) - HMMPfam_B3_4 ACSL3 2181 genome.wustl.edu 37 2 223786113 223786113 + Silent SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004457.3 +1 reviewed p.G307 0.995 41 0% 128 29.7% 12 66.6% - - - HMMPfam_AMP-binding,superfamily_SSF56801 SCG2 7857 genome.wustl.edu 37 2 224462447 224462447 + Silent SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003469.3 -1 reviewed p.I518 0.993 35 0% 179 41.3% 0 - - - - HMMPfam_Granin DNER 92737 genome.wustl.edu 37 2 230456389 230456389 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_139072.3 -1 validated p.K164N 0.000 25 0% 79 50.6% 0 - benign(0.173) deleterious(0.02) neutral(0.399) NULL TRIP12 9320 genome.wustl.edu 37 2 230661330 230661330 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004238.1 -1 provisional p.L1190I 1.000 105 0% 211 33.6% 5 20% probably_damaging(0.994) deleterious(0.03) deleterious(0.817) NULL SP140 11262 genome.wustl.edu 37 2 231109707 231109707 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_007237.4 +1 validated p.F192L 0.002 38 0% 130 40.8% 0 - benign(0.138) tolerated(0.65) neutral(0.014) NULL SP100 6672 genome.wustl.edu 37 2 231379957 231379957 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003113.3 +1 validated p.E748* 1.000 61 0% 137 32.1% 5 40% - - - HMMPfam_HMG_box,HMMSmart_SM00398,superfamily_HMG-box GPR55 9290 genome.wustl.edu 37 2 231775515 231775515 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005683.3 -1 validated p.D55N 0.005 25 0% 28 35.7% 0 - benign(0.255) tolerated(0.05) neutral(0.372) HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like ARMC9 80210 genome.wustl.edu 37 2 232100086 232100086 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_025139.3 +1 validated p.G258S 1.000 34 0% 125 42.4% 14 42.8% probably_damaging(1) tolerated(0.1) deleterious(0.786) superfamily_ARM-type_fold EIF4E2 9470 genome.wustl.edu 37 2 233431843 233431843 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004846.2 +1 validated p.R195Q 1.000 40 0% 75 34.7% 221 48.4% possibly_damaging(0.851) tolerated(0.09) deleterious(0.623) HMMPfam_IF4E,superfamily_Translation initiation factor eIF4e UGT1A10 54575 genome.wustl.edu 37 2 234545590 234545590 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_019075.2 +1 reviewed p.S141Y 0.158 187 0% 411 37.5% 0 - benign(0.353) tolerated(0.3) neutral(0.140) HMMPfam_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase SPP2 6694 genome.wustl.edu 37 2 234975902 234975902 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006944.2 +1 reviewed p.F178L 0.000 65 0% 253 42.7% 0 - benign(0.001) tolerated(1) - HMMPfam_Spp-24 LRRFIP1 9208 genome.wustl.edu 37 2 238659843 238659843 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001137552.1 +1 validated p.E138* 1.000 54 0% 214 33.6% 1 0% - - - HMMPfam_DUF2051 PER2 8864 genome.wustl.edu 37 2 239168626 239168626 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_022817.2 -1 reviewed p.K537N 0.742 420 0% 602 12.8% 3 0% possibly_damaging(0.909) tolerated(0.15) deleterious(0.603) NULL CNTN4 152330 genome.wustl.edu 37 3 2942427 2942427 + Silent SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_175607.1 +1 reviewed p.V333 0.812 58 0% 128 40.6% 0 - - - - HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin TRNT1 51095 genome.wustl.edu 37 3 3179062 3179062 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_182916.2 +1 validated p.M89I 1.000 49 0% 165 32.7% 3 66.6% probably_damaging(0.994) deleterious(0) deleterious(0.897) HMMPfam_PolyA_pol,superfamily_Nucleotidyltransferase GRM7 2917 genome.wustl.edu 37 3 7721866 7721866 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_181874.2 +1 reviewed p.R861Q 1.000 18 0% 32 34.4% 0 - probably_damaging(1) tolerated(0.35) deleterious(0.520) NULL THUMPD3 25917 genome.wustl.edu 37 3 9416270 9416270 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000441127 +1 known p.E150* 1.000 78 0% 207 39.1% 21 19% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_UPF0020 GHRLOS2 84657 genome.wustl.edu 37 3 10327344 10327344 + RNA SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NR_026829.1 +1 validated NULL 0.016 21 0% 20 45% 2 50% - - - - CAND2 23066 genome.wustl.edu 37 3 12892311 12892311 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000454887 +1 known p.D141Y 1.000 24 0% 50 46% 3 0% unknown(0) tolerated(0.07) - NULL NUP210 23225 genome.wustl.edu 37 3 13441304 13441304 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024923.2 -1 reviewed p.Q75 1.000 7 0.000 16 0.375 0 - - - - NULL SATB1 6304 genome.wustl.edu 37 3 18458526 18458526 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001131010.1 -1 validated p.A86T 0.999 33 0% 89 41.6% 1 0% benign(0.003) tolerated(0.66) neutral(0.003) NULL CLASP2 23122 genome.wustl.edu 37 3 33586266 33586266 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015097.1 -1 validated p.A1074V 1.000 70 0% 185 38.9% 5 40% possibly_damaging(0.481) tolerated(0.45) neutral(0.172) superfamily_ARM repeat SCN11A 11280 genome.wustl.edu 37 3 38913738 38913738 + Silent SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014139.2 -1 validated p.R1147 0.960 21 0% 38 21.1% 0 - - - - HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels SCN11A 11280 genome.wustl.edu 37 3 38951638 38951638 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014139.2 -1 validated p.T340 0.073 89 0% 123 36.6% 0 - - - - HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels XIRP1 165904 genome.wustl.edu 37 3 39226540 39226540 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_194293.2 -1 provisional p.R1466I 1.000 23 0% 19 47.4% 0 - benign(0.349) tolerated(0.11) neutral(0.382) NULL C3orf77 375337 genome.wustl.edu 37 3 44284510 44284510 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001145030.1 +1 validated p.R171Q 0.086 66 0% 74 36.5% 0 - benign(0.037) tolerated(0.27) neutral(0.036) NULL C3orf77 375337 genome.wustl.edu 37 3 44286556 44286556 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001145030.1 +1 validated p.I853S 1.000 54 0% 108 46.3% 0 - benign(0.04) deleterious(0) neutral(0.447) NULL TMEM42 131616 genome.wustl.edu 37 3 44906601 44906601 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_144638.1 +1 provisional p.L137I 1.000 35 0% 199 45.7% 44 43.1% possibly_damaging(0.945) tolerated(0.33) neutral(0.414) NULL SACM1L 22908 genome.wustl.edu 37 3 45751031 45751031 + Silent SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014016.3 +1 validated p.V125 1.000 81 0% 164 36.6% 4 25% - - - HMMPfam_Syja_N LTF 4057 genome.wustl.edu 37 3 46501265 46501265 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002343.2 -1 reviewed p.V30I 0.000 16 0% 120 34.2% 456 10.7% benign(0) tolerated(1) - HMMPfam_Transferrin,HMMSmart_TR_FER,superfamily_SSF53850 LRRC2 79442 genome.wustl.edu 37 3 46580568 46580568 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024512.3 -1 validated p.K153Q 0.864 67 0% 195 35.4% 0 - benign(0.002) deleterious(0.05) neutral(0.345) superfamily_SSF52058 ENSG00000232483 0 genome.wustl.edu 37 3 48731815 48731815 + RNA SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000421921 +1 novel NULL 0.008 93 0% 132 37.9% 3 66.6% - - - - IFRD2 7866 genome.wustl.edu 37 3 50325912 50325912 + Silent SNP G G T rs35360115 TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006764.4 -1 validated p.I456 1.000 37 0% 61 42.6% 91 36.2% - - - HMMPfam_IFRD_C VPRBP 9730 genome.wustl.edu 37 3 51505009 51505009 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014703.2 -1 validated p.L41F 1.000 51 0% 146 38.4% 0 - benign(0.302) deleterious(0.04) neutral(0.443) NULL DNAH1 25981 genome.wustl.edu 37 3 52420758 52420758 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015512.4 +1 validated p.K2964N 1.000 12 0% 16 25% 1 100% benign(0.406) tolerated(0.28) neutral(0.162) NULL PRKCD 5580 genome.wustl.edu 37 3 53223100 53223100 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006254.3 +1 reviewed p.F527L 1.000 32 0% 118 44.1% 137 46.7% probably_damaging(0.99) tolerated(0.76) neutral(0.443) HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase CACNA1D 776 genome.wustl.edu 37 3 53535718 53535718 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000720.2 +1 validated p.D152Y 1.000 241 0% 396 38.6% 0 - probably_damaging(0.964) deleterious(0) deleterious(0.851) superfamily_SSF81324 CCDC66 285331 genome.wustl.edu 37 3 56650046 56650046 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001141947.1 +1 validated p.S603Y 0.000 94 0% 240 42.9% 1 100% possibly_damaging(0.49) tolerated(0.1) neutral(0.450) NULL FAM208A 23272 genome.wustl.edu 37 3 56667140 56667140 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001112736.1 -1 validated p.V1227I 1.000 85 0% 169 40.8% 1 100% possibly_damaging(0.94) deleterious(0.02) deleterious(0.768) NULL DNAH12 201625 genome.wustl.edu 37 3 57422698 57422698 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_178504.4 -1 validated p.E1522D 1.000 104 0% 103 38.8% 2 100% probably_damaging(0.999) deleterious(0) deleterious(0.935) superfamily_P-loop containing nucleoside triphosphate hydrolases ADAMTS9 56999 genome.wustl.edu 37 3 64641351 64641351 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_182920.1 -1 reviewed p.S357Y 1.000 66 0% 100 43% 0 - possibly_damaging(0.947) deleterious(0) deleterious(0.835) "HMMPfam_Reprolysin,superfamily_Metalloproteases (""zincins"") catalytic domain" LMOD3 56203 genome.wustl.edu 37 3 69169187 69169187 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_198271.3 -1 validated p.E107* 0.941 126 0% 222 36.9% 0 - - - - NULL GBE1 2632 genome.wustl.edu 37 3 81698021 81698021 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000158.3 -1 reviewed p.E226* 1.000 72 0% 111 30.6% 10 40% benign(0.085) deleterious(0.05) neutral(0.351) NULL CRYBG3 131544 genome.wustl.edu 37 3 97596283 97596283 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_153605.2 +1 validated p.P134H 1.000 32 0% 30 40% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) NULL OR5K1 26339 genome.wustl.edu 37 3 98189026 98189026 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001004736.2 +1 provisional p.F202L 0.972 192 0% 283 38.9% 0 - benign(0.002) tolerated(0.52) neutral(0.009) HMMPfam_7tm_1,superfamily_SSF81321 OR5K1 26339 genome.wustl.edu 37 3 98189280 98189280 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001004736.2 +1 provisional p.P287H 1.000 143 0% 131 36.6% 0 - probably_damaging(0.997) deleterious(0) deleterious(0.911) HMMPfam_7tm_1,superfamily_SSF81321 CLDND1 56650 genome.wustl.edu 37 3 98240162 98240162 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001040182.1 -1 validated p.R59Q 0.997 58 0% 147 38.1% 11 45.4% benign(0.001) tolerated(0.49) neutral(0.011) NULL CBLB 868 genome.wustl.edu 37 3 105470379 105470379 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_170662.3 -1 validated p.K217T 1.000 48 0% 113 45.1% 2 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Cbl_N2,superfamily_EF-hand PHLDB2 90102 genome.wustl.edu 37 3 111603511 111603511 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001134438.1 +1 validated p.S196L 0.646 23 0% 36 38.9% 0 - possibly_damaging(0.889) deleterious(0.01) deleterious(0.755) NULL SLC9A10 285335 genome.wustl.edu 37 3 111997692 111997692 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_183061.1 -1 validated p.A68T 0.541 63 0% 103 41.7% 0 - probably_damaging(0.99) tolerated(0.77) neutral(0.443) HMMPfam_Na_H_Exchanger SPICE1 152185 genome.wustl.edu 37 3 113218408 113218408 + Missense_Mutation SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_144718.3 -1 validated p.K57E 1.000 140 0% 297 37.4% 2 0% probably_damaging(0.991) deleterious(0.02) deleterious(0.827) NULL GRAMD1C 54762 genome.wustl.edu 37 3 113619973 113619973 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_017577.4 +1 validated p.S212 0.060 31 0% 136 33.8% 0 - - - - NULL GSK3B 2932 genome.wustl.edu 37 3 119720937 119720937 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002093.3 -1 reviewed p.E80* 1.000 47 0% 188 43.6% 3 33.3% - - - HMMSmart_S_TKc,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase FSTL1 11167 genome.wustl.edu 37 3 120123732 120123732 + Silent SNP C C A rs138829728 by1000genomes TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_007085.4 -1 reviewed p.T183 0.996 86 0% 303 37% 36 25% - - - superfamily_SSF47473 STXBP5L 9515 genome.wustl.edu 37 3 121097679 121097679 + Nonsense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014980.2 +1 validated p.R789* 1.000 26 0% 42 47.6% 0 - - - - NULL HEG1 57493 genome.wustl.edu 37 3 124731647 124731647 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020733.1 -1 validated p.E926* 0.064 76 0% 215 47.4% 0 - - - - NULL NEK11 79858 genome.wustl.edu 37 3 130947432 130947432 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024800.4 +1 reviewed p.C487Y 1.000 45 0% 107 40.2% 21 28.5% benign(0.035) deleterious(0.03) neutral(0.366) NULL ACPP 55 genome.wustl.edu 37 3 132068846 132068846 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001134194.1 +1 reviewed p.A288 0.486 64 0% 196 35.7% 1 0% - - - HMMPfam_Acid_phosphat_A,PatternScan_HIS_ACID_PHOSPHAT_2,superfamily_SSF53254 EPHB1 2047 genome.wustl.edu 37 3 134898781 134898781 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004441.4 +1 reviewed p.E613D 1.000 52 0% 163 36.8% 0 - possibly_damaging(0.95) deleterious(0) deleterious(0.838) superfamily_Protein kinase-like (PK-like) NCK1 4690 genome.wustl.edu 37 3 136664729 136664729 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006153.3 +1 reviewed p.E177D 1.000 68 0% 157 39.5% 51 43.1% benign(0) tolerated(0.36) neutral(0.020) NULL ZBTB38 253461 genome.wustl.edu 37 3 141163681 141163681 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001080412.2 +1 validated p.T817 0.848 33 0% 73 41.1% 1 100% - - - NULL XRN1 54464 genome.wustl.edu 37 3 142139914 142139914 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_019001.3 -1 validated p.A373T 1.000 122 0% 260 38.5% 0 - benign(0.021) tolerated(0.2) neutral(0.050) NULL PLS1 5357 genome.wustl.edu 37 3 142422760 142422760 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001145319.1 +1 reviewed p.F474L 1.000 39 0% 83 41% 24 29.1% probably_damaging(1) deleterious(0.02) deleterious(0.883) HMMPfam_CH,HMMSmart_CH,superfamily_Calponin-homology U2SURP 23350 genome.wustl.edu 37 3 142741493 142741493 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001080415.1 +1 provisional p.K336T 1.000 68 0% 106 39.6% 5 0% possibly_damaging(0.808) tolerated(0.07) deleterious(0.623) HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD ZIC4 84107 genome.wustl.edu 37 3 147113930 147113930 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000383075 -1 known p.L133 1.000 10 0% 27 44.4% 0 - - - - NULL ANKUB1 389161 genome.wustl.edu 37 3 149485670 149485670 + Missense_Mutation SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001144960.1 -1 predicted p.V260A 0.999 24 0% 84 32.1% 9 77.7% probably_damaging(0.959) deleterious(0.02) deleterious(0.786) HMMSmart_SM00248,superfamily_Ankyrin repeat FAM194A 131831 genome.wustl.edu 37 3 150403619 150403619 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152394.3 -1 validated p.F231 0.064 137 0% 291 41.9% 0 - - - - NULL ARHGEF26 26084 genome.wustl.edu 37 3 153912458 153912458 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015595.3 +1 validated p.D599A 1.000 64 0% 121 41.3% 0 - probably_damaging(0.958) tolerated(0.2) neutral(0.451) HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain) KCNAB1 7881 genome.wustl.edu 37 3 156249276 156249276 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_172160.2 +1 reviewed p.G387D 1.000 30 0% 116 34.5% 0 - probably_damaging(0.974) tolerated(0.09) deleterious(0.712) HMMPfam_Aldo_ket_red,superfamily_NAD(P)-linked oxidoreductase MLF1 4291 genome.wustl.edu 37 3 158310341 158310341 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_022443.3 +1 validated p.G56* 0.000 76 0% 266 39.5% 11 9% - - - HMMPfam_Mlf1IP SMC4 10051 genome.wustl.edu 37 3 160151484 160151484 + Nonsense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001002800.1 +1 validated p.R1252* 1.000 60 0% 102 49% 5 80% - - - HMMPfam_SMC_N,superfamily_P-loop containing nucleoside triphosphate hydrolases TRIM59 286827 genome.wustl.edu 37 3 160156378 160156378 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_173084.2 -1 validated p.Q198H 1.000 67 0% 152 50.7% 1 0% benign(0.027) tolerated(0.31) neutral(0.029) NULL SI 6476 genome.wustl.edu 37 3 164700805 164700805 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001041.3 -1 reviewed p.Q1744H 0.950 152 0% 85 43.5% 0 - benign(0.001) tolerated(0.16) neutral(0.059) NULL SI 6476 genome.wustl.edu 37 3 164709222 164709222 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001041.3 -1 reviewed p.A1676D 1.000 37 0% 129 45.7% 0 - probably_damaging(0.994) deleterious(0) deleterious(0.897) HMMPfam_Glyco_hydro_31 SI 6476 genome.wustl.edu 37 3 164748573 164748573 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001041.3 -1 reviewed p.R940I 0.000 71 0% 71 39.4% 0 - benign(0.353) deleterious(0) deleterious(0.556) HMMSmart_SM00018,superfamily_Trefoil SI 6476 genome.wustl.edu 37 3 164777023 164777023 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001041.3 -1 reviewed p.A404E 0.012 49 0% 134 40.3% 0 - benign(0.027) tolerated(0.93) neutral(0.002) HMMPfam_Glyco_hydro_31,superfamily_(Trans)glycosidases SI 6476 genome.wustl.edu 37 3 164780270 164780270 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001041.3 -1 reviewed p.E303D 0.560 49 0% 75 45.3% 0 - benign(0.003) tolerated(0.56) neutral(0.006) NULL SI 6476 genome.wustl.edu 37 3 164793789 164793789 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001041.3 -1 reviewed p.K4N 0.514 56 0% 44 50% 0 - unknown(0) deleterious(0.02) - NULL SLITRK3 22865 genome.wustl.edu 37 3 164907646 164907646 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014926.2 -1 validated p.E325K 1.000 75 0% 301 42.2% 0 - benign(0.002) tolerated(0.19) neutral(0.050) NULL EIF5A2 56648 genome.wustl.edu 37 3 170612213 170612213 + Splice_Site SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020390.5 -1 validated e3-1 1.000 97 0% 204 37.7% 0 - - - - - TNIK 23043 genome.wustl.edu 37 3 170819401 170819401 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015028.2 -1 validated p.E810* 1.000 134 0% 383 37.9% 0 - - - - NULL TNIK 23043 genome.wustl.edu 37 3 170828506 170828506 + Nonsense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015028.2 -1 validated p.R761* 0.970 41 0% 65 43.1% 0 - - - - NULL PIK3CA 5290 genome.wustl.edu 37 3 178916725 178916725 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006218.2 +1 reviewed p.R38C 1.000 40 0% 72 38.9% 2 100% probably_damaging(1) deleterious(0.03) deleterious(0.865) HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B PIK3CA 5290 genome.wustl.edu 37 3 178916936 178916936 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006218.2 +1 reviewed p.R108H 1.000 48 0% 92 42.4% 0 - possibly_damaging(0.945) tolerated(0.06) deleterious(0.712) HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236 TTC14 151613 genome.wustl.edu 37 3 180321103 180321103 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_133462.3 +1 validated p.E160* 1.000 124 0% 313 39.3% 0 - - - - superfamily_Nucleic acid-binding proteins ATP11B 23200 genome.wustl.edu 37 3 182554145 182554145 + Nonsense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014616.1 +1 validated p.R147* 1.000 77 0% 142 35.9% 0 - - - - HMMPfam_E1-E2_ATPase,superfamily_SSF81653 MCF2L2 23101 genome.wustl.edu 37 3 182925454 182925454 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015078.2 -1 validated p.R885Q 0.913 82 0% 188 42% 0 - possibly_damaging(0.751) deleterious(0.02) deleterious(0.659) HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like B3GNT5 84002 genome.wustl.edu 37 3 182988300 182988300 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_032047.4 +1 reviewed p.Y238* 0.967 51 2% 72 26.4% 7 57.1% - - - HMMPfam_Galactosyl_T EIF4G1 1981 genome.wustl.edu 37 3 184045227 184045227 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_182917.3 +1 reviewed p.R1218W 0.787 16 0% 13 38.5% 173 44.5% probably_damaging(1) deleterious(0) deleterious(0.945) NULL EHHADH 1962 genome.wustl.edu 37 3 184910487 184910487 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001966.3 -1 reviewed p.E567* 1.000 39 0% 81 40.7% 1 100% - - - HMMPfam_3HCDH,superfamily_6DGDH_C_like KNG1 3827 genome.wustl.edu 37 3 186459780 186459780 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001102416.2 +1 reviewed p.T532I 0.268 25 0% 55 36.4% 0 - possibly_damaging(0.839) deleterious(0.04) deleterious(0.669) NULL RTP2 344892 genome.wustl.edu 37 3 187416457 187416457 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001004312.2 -1 validated p.E169D 1.000 18 0% 47 29.8% 0 - possibly_damaging(0.865) tolerated(0.09) deleterious(0.631) NULL LSG1 55341 genome.wustl.edu 37 3 194362881 194362881 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018385.2 -1 reviewed p.N631 0.000 35 0% 79 36.7% 12 50% - - - NULL LMLN 89782 genome.wustl.edu 37 3 197723056 197723056 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001136049.2 +1 reviewed p.R353Q 1.000 77 1.3% 161 39.8% 4 75% probably_damaging(0.99) tolerated(0.19) deleterious(0.491) "HMMPfam_Peptidase_M8,superfamily_Metalloproteases (""zincins"") catalytic domain" ZNF141 7700 genome.wustl.edu 37 4 367050 367050 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003441.2 +1 validated p.E275* 0.293 80 0% 94 39.4% 0 - probably_damaging(0.989) tolerated(0.26) deleterious(0.474) NULL NOP14 8602 genome.wustl.edu 37 4 2940596 2940596 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003703.1 -1 validated p.E846K 1.000 178 0% 300 42.7% 19 52.6% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_Nop14 MRFAP1L1 114932 genome.wustl.edu 37 4 6711193 6711193 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_203462.2 -1 validated p.S55I 0.610 38 0% 54 48.1% 134 51.4% possibly_damaging(0.805) deleterious(0.01) deleterious(0.709) NULL SH3TC1 54436 genome.wustl.edu 37 4 8216260 8216260 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018986.3 +1 validated p.F145C 0.995 30 0% 79 35.4% 2 50% probably_damaging(1) deleterious(0) deleterious(0.945) NULL BOD1L 259282 genome.wustl.edu 37 4 13615281 13615281 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_148894.2 -1 validated p.F393L 0.000 31 0% 55 41.8% 0 - benign(0.011) tolerated(0.66) neutral(0.003) superfamily_SSF81995 BOD1L 259282 genome.wustl.edu 37 4 13617097 13617097 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_148894.2 -1 validated p.R133Q 1.000 45 0% 146 37% 0 - probably_damaging(1) deleterious(0.02) deleterious(0.883) superfamily_SSF81995 LGI2 55203 genome.wustl.edu 37 4 25005431 25005431 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018176.3 -1 validated p.R427Q 0.162 28 0% 62 38.7% 1 100% benign(0.051) tolerated(0.42) neutral(0.017) HMMPfam_EPTP SEPSECS 51091 genome.wustl.edu 37 4 25157669 25157669 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_016955.3 -1 validated p.M100I 1.000 67 0% 291 40.2% 3 100% benign(0.012) tolerated(1) neutral(0.001) HMMPfam_SLA_LP_auto_ag,superfamily_PLP-dependent transferases CCKAR 886 genome.wustl.edu 37 4 26490892 26490892 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000730.2 -1 reviewed p.F109 0.987 70 0% 122 34.4% 0 - - - - HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like STIM2 57620 genome.wustl.edu 37 4 26959338 26959338 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020860.3 +1 reviewed p.K216N 1.000 47 0% 57 40.4% 6 66.6% probably_damaging(0.997) tolerated(0.35) deleterious(0.487) superfamily_SAM/Pointed domain KIAA1239 57495 genome.wustl.edu 37 4 37448023 37448023 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001144990.1 +1 validated p.K1471N 1.000 18 0% 57 35.1% 0 - probably_damaging(0.996) tolerated(0.05) deleterious(0.807) superfamily_WD40_like TLR10 81793 genome.wustl.edu 37 4 38775278 38775278 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001017388.1 -1 reviewed p.S645Y 0.995 86 0% 228 39.5% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_TIR,HMMSmart_TIR,superfamily_TIR NSUN7 79730 genome.wustl.edu 37 4 40792753 40792753 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024677.4 +1 validated p.E391* 1.000 78 0% 221 37.6% 1 0% - - - superfamily_S-adenosyl-L-methionine-dependent methyltransferases BEND4 389206 genome.wustl.edu 37 4 42122212 42122212 + Nonsense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_207406.3 -1 validated p.R416* 1.000 38 0% 134 38.8% 0 - - - - HMMPfam_BEN GRXCR1 389207 genome.wustl.edu 37 4 42895469 42895469 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001080476.1 +1 provisional p.Q62H 0.880 48 0% 50 52% 0 - benign(0) deleterious(0.03) neutral(0.364) NULL GABRA2 2555 genome.wustl.edu 37 4 46252502 46252502 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000807.2 -1 reviewed p.T393 0.659 78 0% 66 42.4% 0 - - - - HMMPfam_Neur_chan_memb,superfamily_Neurotransmitter-gated ion-channel transmembrane pore SPATA18 132671 genome.wustl.edu 37 4 52943055 52943055 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_145263.2 +1 provisional p.R290H 0.265 22 0% 38 39.5% 33 42.4% benign(0.064) tolerated(0.18) neutral(0.060) NULL KDR 3791 genome.wustl.edu 37 4 55956156 55956156 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002253.2 -1 reviewed p.I1053M 0.995 38 0% 97 52.6% 1 0% probably_damaging(0.992) deleterious(0) deleterious(0.892) HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like CEP135 9662 genome.wustl.edu 37 4 56841077 56841077 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_025009.3 +1 validated p.S472Y 1.000 41 0% 99 33.3% 2 0% benign(0.009) deleterious(0) neutral(0.445) NULL POLR2B 5431 genome.wustl.edu 37 4 57896508 57896508 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000938.1 +1 reviewed p.A1126 0.623 23 0% 101 41.6% 113 44.2% - - - HMMPfam_RNA_pol_Rpb2_7,superfamily_beta and beta-prime subunits of DNA dependent RNA-polymerase UGT2B15 7366 genome.wustl.edu 37 4 69535682 69535682 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001076.2 -1 validated p.L219I 0.203 85 0% 126 44.4% 0 - benign(0.019) tolerated(0.16) neutral(0.060) HMMPfam_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase UGT2A1 10941 genome.wustl.edu 37 4 70505247 70505247 + Splice_Site SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000457664 -1 known e2-1 1.000 56 0% 123 37.4% 0 - - - - - CSN3 1448 genome.wustl.edu 37 4 71110544 71110544 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005212.2 +1 validated p.S3I 0.000 109 0% 136 38.2% 0 - probably_damaging(0.995) deleterious(0) deleterious(0.902) HMMPfam_Casein_kappa CABS1 85438 genome.wustl.edu 37 4 71201148 71201148 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_033122.3 +1 validated p.S131Y 0.991 20 0% 28 46.4% 0 - possibly_damaging(0.449) deleterious(0) deleterious(0.592) NULL MUC7 4589 genome.wustl.edu 37 4 71347367 71347367 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001145006.1 +1 reviewed p.E302D 0.000 217 0% 706 40.5% 0 - unknown(0) tolerated(0.44) - NULL ENAM 10117 genome.wustl.edu 37 4 71508545 71508545 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_031889.2 +1 reviewed p.K468Q 0.979 51 0% 35 34.3% 0 - probably_damaging(0.999) deleterious(0.01) deleterious(0.896) NULL AFP 174 genome.wustl.edu 37 4 74315104 74315104 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001134.1 +1 reviewed p.L371I 0.925 96 0% 190 36.8% 0 - probably_damaging(0.999) deleterious(0.01) deleterious(0.896) superfamily_Serum_albumin,HMMPfam_Serum_albumin,HMMSmart_ALBUMIN IL8 3576 genome.wustl.edu 37 4 74606378 74606378 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000584.2 +1 reviewed p.M1I 1.000 23 0% 92 50% 74 77% possibly_damaging(0.797) deleterious(0.04) deleterious(0.648) NULL PF4V1 5197 genome.wustl.edu 37 4 74719815 74719815 + Silent SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002620.2 +1 provisional p.I97 0.000 49 0% 178 30.9% 93 31.1% - - - HMMPfam_IL8,HMMSmart_SM00199,superfamily_Interleukin 8-like chemokines EREG 2069 genome.wustl.edu 37 4 75248457 75248457 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001432.2 +1 validated p.L125R 0.970 75 1.3% 291 37.8% 0 - probably_damaging(0.998) deleterious(0.01) deleterious(0.880) NULL PPEF2 5470 genome.wustl.edu 37 4 76804147 76804147 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006239.2 -1 reviewed p.L289I 1.000 93 0% 257 39.7% 0 - probably_damaging(0.978) deleterious(0.02) deleterious(0.803) HMMPfam_Metallophos,HMMSmart_SM00156,superfamily_Metallo-dependent phosphatases SDAD1 55153 genome.wustl.edu 37 4 76881297 76881297 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018115.2 -1 validated p.E469* 1.000 146 0% 399 39.1% 5 0% - - - HMMPfam_SDA1,superfamily_ARM repeat MRPL1 65008 genome.wustl.edu 37 4 78804651 78804651 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000502384 +1 known p.E87* 1.000 65 0% 102 35.3% 13 15.3% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Ribosomal_L1,superfamily_Ribosomal protein L1 FRAS1 80144 genome.wustl.edu 37 4 79308556 79308556 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_025074.6 +1 reviewed p.L1225I 0.482 15 0% 43 41.9% 0 - probably_damaging(1) deleterious(0.02) deleterious(0.883) NULL FRAS1 80144 genome.wustl.edu 37 4 79440607 79440607 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_025074.6 +1 reviewed p.F3503L 1.000 24 0% 48 37.5% 2 50% probably_damaging(0.967) tolerated(0.08) deleterious(0.709) NULL GK2 2712 genome.wustl.edu 37 4 80328892 80328892 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_033214.2 -1 validated p.R155C 1.000 63 0% 196 43.9% 0 - benign(0.33) deleterious(0.02) deleterious(0.486) PatternScan_FGGY_KINASES_1,HMMPfam_FGGY_N,superfamily_SSF53067 PRKG2 5593 genome.wustl.edu 37 4 82070045 82070045 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006259.1 -1 provisional p.D383Y 0.999 27 0% 71 39.4% 1 0% probably_damaging(0.976) deleterious(0) deleterious(0.863) HMMPfam_cNMP_binding,HMMSmart_cNMP,superfamily_cNMP_binding SEC31A 22872 genome.wustl.edu 37 4 83763579 83763579 + Silent SNP T T A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000503937 -1 known p.D44V 1.000 17 0% 22 36.4% 253 48.2% - - - NULL SEC31A 22872 genome.wustl.edu 37 4 83763580 83763580 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001077207.1 -1 reviewed p.R894Q 1.000 17 0% 22 36.4% 251 48.6% benign(0.001) tolerated(0.76) neutral(0.001) NULL SEC31A 22872 genome.wustl.edu 37 4 83784526 83784526 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001077207.1 -1 reviewed p.S485Y 1.000 126 0% 285 40% 19 36.8% possibly_damaging(0.822) deleterious(0.03) deleterious(0.675) superfamily_WD40 repeat-like FAM175A 84142 genome.wustl.edu 37 4 84384689 84384689 + Nonsense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_139076.2 -1 validated p.R252* 0.005 200 0% 396 32.1% 2 50% - - - NULL AGPAT9 84803 genome.wustl.edu 37 4 84518018 84518018 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_032717.3 +1 validated p.E288* 1.000 163 0% 201 32.3% 1 0% - - - HMMPfam_Acyltransferase,HMMSmart_PlsC PTPN13 5783 genome.wustl.edu 37 4 87706500 87706500 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_080685.2 +1 reviewed p.A2084S 0.003 38 2.6% 92 32.6% 1 100% benign(0.002) deleterious(0.03) neutral(0.364) NULL SPARCL1 8404 genome.wustl.edu 37 4 88415559 88415559 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001128310.1 -1 validated p.E131D 0.000 85 0% 237 46.8% 9 0% benign(0.026) tolerated(0.06) neutral(0.324) NULL PPM1K 152926 genome.wustl.edu 37 4 89183867 89183867 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152542.3 -1 validated p.Y333 0.984 31 0% 110 45.5% 2 0% - - - HMMSmart_SM00331,HMMSmart_SM00332,superfamily_Protein serine/threonine phosphatase 2C catalytic domain,HMMPfam_PP2C HERC5 51191 genome.wustl.edu 37 4 89421093 89421093 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_016323.2 +1 reviewed p.L821 1.000 183 0% 248 38.7% 0 - - - - HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain C4orf37 285555 genome.wustl.edu 37 4 99049741 99049741 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_174952.2 -1 validated p.K75N 0.986 25 0% 67 43.3% 1 0% possibly_damaging(0.819) tolerated(0.08) deleterious(0.609) NULL NFKB1 4790 genome.wustl.edu 37 4 103528406 103528406 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003998.3 +1 reviewed p.S685F 0.980 14 0% 43 34.9% 41 53.6% probably_damaging(0.998) deleterious(0) deleterious(0.919) HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK MANBA 4126 genome.wustl.edu 37 4 103571759 103571759 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005908.3 -1 reviewed p.H602N 1.000 58 0% 240 27.9% 17 41.1% possibly_damaging(0.95) tolerated(0.34) neutral(0.417) HMMPfam_Glyco_hydro_2_C,superfamily_Glyco_hydro_cat MANBA 4126 genome.wustl.edu 37 4 103592468 103592468 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005908.3 -1 reviewed p.F400L 1.000 76 0% 227 43.2% 6 33.3% possibly_damaging(0.822) deleterious(0.02) deleterious(0.694) HMMPfam_Glyco_hydro_2_C,superfamily_Glyco_hydro_cat CCDC109B 55013 genome.wustl.edu 37 4 110581350 110581350 + Splice_Site SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_017918.4 +1 validated e3-1 1.000 26 0% 77 44.2% 1 0% - - - - CFI 3426 genome.wustl.edu 37 4 110673657 110673657 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000204.3 -1 reviewed p.E303* 0.067 87 0% 188 35.1% 101 0% - - - superfamily_LDL receptor-like module LRIT3 345193 genome.wustl.edu 37 4 110791254 110791254 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_198506.2 +1 validated p.R405I 0.368 84 0% 182 41.8% 0 - possibly_damaging(0.951) tolerated(0.19) neutral(0.444) NULL ANK2 287 genome.wustl.edu 37 4 114279329 114279329 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001148.4 +1 reviewed p.D3185 0.006 28 0% 31 51.6% 1 100% - - - NULL SEC24D 9871 genome.wustl.edu 37 4 119652527 119652527 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014822.2 -1 reviewed p.E938K 1.000 53 0% 117 36.8% 77 46.7% benign(0.178) tolerated(0.52) neutral(0.025) HMMPfam_Gelsolin,superfamily_C-terminal gelsolin-like domain of Sec23/24 SEC24D 9871 genome.wustl.edu 37 4 119660425 119660425 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014822.2 -1 reviewed p.T752 0.056 27 0% 53 45.3% 41 39% - - - HMMPfam_Sec23_BS,superfamily_beta-sandwich domain of Sec23/24 SEC24D 9871 genome.wustl.edu 37 4 119674014 119674014 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014822.2 -1 reviewed p.R484Q 1.000 59 0% 77 44.2% 9 33.3% possibly_damaging(0.904) tolerated(0.12) deleterious(0.619) HMMPfam_Sec23_trunk,superfamily_vWA-like SYNPO2 171024 genome.wustl.edu 37 4 119952165 119952165 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_133477.2 +1 validated p.F745L 1.000 40 0% 70 44.3% 1 0% probably_damaging(0.998) deleterious(0) deleterious(0.919) NULL MAD2L1 4085 genome.wustl.edu 37 4 120982090 120982090 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000333047 -1 known p.S88F 0.999 17 0% 103 37.9% 11 63.6% benign(0.113) - - NULL KIAA1109 84162 genome.wustl.edu 37 4 123270344 123270344 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015312.3 +1 reviewed p.R4438C 1.000 39 0% 177 36.2% 2 100% probably_damaging(1) tolerated(0.11) deleterious(0.772) HMMPfam_FSA_C FAT4 79633 genome.wustl.edu 37 4 126408688 126408688 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024582.4 +1 validated p.F4335 0.992 41 0% 64 32.8% 0 - - - - HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2 FAT4 79633 genome.wustl.edu 37 4 126412093 126412093 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024582.4 +1 validated p.F4706V 1.000 76 0% 112 38.4% 0 - probably_damaging(0.995) tolerated(0.49) neutral(0.468) NULL PCDH18 54510 genome.wustl.edu 37 4 138451306 138451306 + Missense_Mutation SNP G G T rs144644832 by1000genomes TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_019035.3 -1 reviewed p.S646Y 0.013 18 0% 36 30.6% 2 0% possibly_damaging(0.91) deleterious(0.04) deleterious(0.712) HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like NAA15 80155 genome.wustl.edu 37 4 140255353 140255353 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_057175.3 +1 validated p.R27I 1.000 64 0% 113 39.8% 2 0% probably_damaging(0.961) deleterious(0) deleterious(0.849) superfamily_TPR-like NAA15 80155 genome.wustl.edu 37 4 140306065 140306065 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_057175.3 +1 validated p.T745 0.076 84 0% 116 46.6% 9 55.5% - - - NULL MAML3 55534 genome.wustl.edu 37 4 140641423 140641423 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018717.4 -1 validated p.R819Q 1.000 30 0% 131 37.4% 2 50% probably_damaging(1) tolerated(0.19) deleterious(0.549) NULL INPP4B 8821 genome.wustl.edu 37 4 143029297 143029297 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001101669.1 -1 reviewed p.E775K 1.000 172 0% 187 43.3% 8 62.5% possibly_damaging(0.884) tolerated(0.71) neutral(0.346) NULL OTUD4 54726 genome.wustl.edu 37 4 146071810 146071810 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001102653.1 -1 reviewed p.K307Q 0.998 88 0% 377 39.5% 4 50% probably_damaging(1) tolerated(0.16) deleterious(0.559) NULL PRMT10 90826 genome.wustl.edu 37 4 148594947 148594947 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_138364.2 -1 provisional p.E139D 1.000 35 0% 131 43.5% 0 - possibly_damaging(0.766) deleterious(0.02) deleterious(0.667) superfamily_TPR-like,superfamily_S-adenosyl-L-methionine-dependent methyltransferases DCLK2 166614 genome.wustl.edu 37 4 151142908 151142908 + Missense_Mutation SNP T T A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001040260.2 +1 validated p.N404K 1.000 78 0% 223 44.4% 1 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase LRBA 987 genome.wustl.edu 37 4 151788952 151788952 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006726.2 -1 validated p.K879N 1.000 75 0% 152 48.7% 0 - probably_damaging(0.991) deleterious(0.02) deleterious(0.827) superfamily_ARM repeat FBXW7 55294 genome.wustl.edu 37 4 153259071 153259071 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_033632.2 -1 reviewed p.E248D 1.000 56 0% 191 39.8% 3 0% benign(0.01) tolerated(0.29) neutral(0.030) superfamily_WD40 repeat-like KIAA0922 23240 genome.wustl.edu 37 4 154506627 154506627 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015196.3 +1 validated p.S391F 0.363 22 0% 87 33.3% 0 - benign(0.41) tolerated(0.17) neutral(0.192) NULL DCHS2 54798 genome.wustl.edu 37 4 155156318 155156318 + Silent SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_017639.3 -1 validated p.Q2707 0.000 31 0% 69 31.9% 0 - - - - NULL DCHS2 54798 genome.wustl.edu 37 4 155160433 155160433 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_017639.3 -1 validated p.P2006T 0.827 43 0% 57 35.1% 0 - probably_damaging(0.978) tolerated(0.53) neutral(0.428) HMMPfam_Cadherin,superfamily_Cadherin-like FGB 2244 genome.wustl.edu 37 4 155489573 155489573 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005141.4 +1 reviewed p.E253D 1.000 51 0% 114 34.2% 0 - probably_damaging(0.986) tolerated(0.3) neutral(0.463) HMMPfam_Fibrinogen_C,HMMSmart_SM00186,superfamily_Fibrinogen C-terminal domain-like FGG 2266 genome.wustl.edu 37 4 155533543 155533543 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_021870.2 -1 reviewed p.F41 1.000 101 0% 123 46.3% 0 - - - - HMMPfam_Fib_gamma NPY5R 4889 genome.wustl.edu 37 4 164271473 164271473 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006174.2 +1 provisional p.E16D 1.000 43 0% 126 34.1% 0 - benign(0.137) tolerated(0.2) neutral(0.060) superfamily_SSF81321 TKTL2 84076 genome.wustl.edu 37 4 164394205 164394205 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_032136.4 -1 validated p.A228T 0.536 19 0% 73 41.1% 0 - possibly_damaging(0.445) deleterious(0) deleterious(0.590) HMMPfam_Transketolase_N,superfamily_SSF52518 ASB5 140458 genome.wustl.edu 37 4 177190068 177190068 + Silent SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_080874.2 -1 reviewed p.G64 0.997 42 0% 76 34.2% 0 - - - - superfamily_Ankyrin repeat C4orf47 441054 genome.wustl.edu 37 4 186353315 186353315 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001114357.1 +1 predicted p.L94I 0.269 66 0% 141 39.7% 3 100% benign(0.094) tolerated(0.62) neutral(0.011) NULL CYP4V2 285440 genome.wustl.edu 37 4 187131688 187131688 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_207352.3 +1 reviewed p.E491* 1.000 54 0% 160 38.8% 3 100% - - - HMMPfam_p450,superfamily_Cytochrome P450 FAT1 2195 genome.wustl.edu 37 4 187542795 187542795 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005245.3 -1 reviewed p.E1649* 1.000 15 0% 55 32.7% 0 - - - - HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like ZFP42 132625 genome.wustl.edu 37 4 188924697 188924697 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_174900.3 +1 validated p.R246W 0.999 25 0% 86 43% 0 - possibly_damaging(0.893) deleterious(0.01) deleterious(0.758) HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers TRIML2 205860 genome.wustl.edu 37 4 189012880 189012880 + Missense_Mutation SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_173553.1 -1 provisional p.Y271H 0.004 55 0% 86 32.6% 0 - benign(0.159) deleterious(0) neutral(0.459) HMMPfam_SPRY EXOC3 11336 genome.wustl.edu 37 5 462289 462289 + Nonsense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_007277.4 +1 reviewed p.L507* 1.000 50 0% 100 39% 11 0% - - - HMMPfam_Sec6 C5orf38 153571 genome.wustl.edu 37 5 2752551 2752551 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_178569.2 +1 provisional p.W58L 0.022 4 0.000 16 0.562 1 0% unknown(0) - - NULL SEMA5A 9037 genome.wustl.edu 37 5 9136646 9136646 + Silent SNP C C T rs17238609 byCluster;byFrequency;by1000genomes TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003966.2 -1 reviewed p.T523 0.564 22 0% 70 40% 0 - - - - HMMPfam_PSI,HMMSmart_PSI,superfamily_Plexin-like_fold DNAH5 1767 genome.wustl.edu 37 5 13841053 13841071 + Frame_Shift_Del DEL TAATCAGAGTCTCGTATTT TAATCAGAGTCTCGTATTT - novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 TAATCAGAGTCTCGTATTT TAATCAGAGTCTCGTATTT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001369.2 -1 reviewed p.K1885fs 1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.899:1.000:1.000:1.000:1.000:0.999 - - - - - - - - - NULL TRIO 7204 genome.wustl.edu 37 5 14290915 14290915 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_007118.2 +1 validated p.E211K 1.000 51 0% 123 37.4% 1 100% unknown(0) tolerated(0.16) - superfamily_CRAL/TRIO domain CDH12 1010 genome.wustl.edu 37 5 21752167 21752167 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004061.3 -1 reviewed p.K688N 1.000 87 0% 309 40.1% 0 - benign(0.026) tolerated(0.1) neutral(0.287) HMMPfam_Cadherin_C PRDM9 56979 genome.wustl.edu 37 5 23522948 23522948 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020227.2 +1 provisional p.R279Q 0.973 14 0% 85 43.5% 0 - possibly_damaging(0.516) tolerated(1) neutral(0.173) HMMSmart_SET,superfamily_SSF82199 CDH10 1008 genome.wustl.edu 37 5 24537668 24537668 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006727.2 -1 reviewed p.R116Q 1.000 43 0% 112 39.3% 0 - probably_damaging(0.984) deleterious(0.02) deleterious(0.814) HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin DROSHA 29102 genome.wustl.edu 37 5 31526816 31526816 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_013235.4 -1 validated p.R75Q 0.711 38 0% 49 26.5% 1 100% unknown(0) deleterious(0.01) - NULL NPR3 4883 genome.wustl.edu 37 5 32789604 32789604 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024563.3 +1 predicted p.L33I 0.017 41 0% 60 36.7% 1 100% benign(0.29) - - NULL ADAMTS12 81792 genome.wustl.edu 37 5 33614442 33614442 + Missense_Mutation SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_030955.2 -1 reviewed p.Y810H 1.000 20 0% 119 37.8% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_ADAM_spacer1 AGXT2 64902 genome.wustl.edu 37 5 34998917 34998917 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_031900.3 -1 reviewed p.A484 0.322 195 0% 372 39.5% 0 - - - - superfamily_PyrdxlP-dep_Trfase_major SLC1A3 6507 genome.wustl.edu 37 5 36680569 36680569 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004172.4 +1 reviewed p.F389L 0.990 21 0% 79 26.6% 3 33.3% possibly_damaging(0.941) deleterious(0) deleterious(0.831) HMMPfam_SDF EGFLAM 133584 genome.wustl.edu 37 5 38435340 38435340 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152403.2 +1 validated p.S756 0.515 29 0% 112 50% 2 0% - - - HMMSmart_LamG,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2 FYB 2533 genome.wustl.edu 37 5 39127904 39127904 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001465.3 -1 validated p.F616V 0.971 72 0% 198 40.4% 1 0% possibly_damaging(0.894) tolerated(0.18) neutral(0.408) NULL C9 735 genome.wustl.edu 37 5 39306748 39306748 + Missense_Mutation SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001737.3 -1 reviewed p.N463D 0.000 49 0% 106 29.2% 0 - benign(0.002) tolerated(0.62) neutral(0.004) HMMPfam_MACPF,HMMSmart_MACPF FBXO4 26272 genome.wustl.edu 37 5 41941351 41941351 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_012176.2 +1 reviewed p.L378I 1.000 68 0% 229 41.9% 12 75% probably_damaging(0.996) deleterious(0.04) deleterious(0.810) NULL GHR 2690 genome.wustl.edu 37 5 42713562 42713562 + Silent SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000163.2 +1 reviewed p.I272 1.000 258 0% 438 37% 0 - - - - NULL MOCS2 4338 genome.wustl.edu 37 5 52394488 52394488 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004531.3 -1 reviewed p.E171K 1.000 139 0% 223 35% 53 45.2% possibly_damaging(0.95) deleterious(0.03) deleterious(0.758) superfamily_Mb_biosynth_MoaE IL6ST 3572 genome.wustl.edu 37 5 55247319 55247319 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002184.2 -1 reviewed p.E605* 1.000 48 0% 110 41.8% 6 0% - - - HMMPfam_fn3,superfamily_Fibronectin type III MAP3K1 4214 genome.wustl.edu 37 5 56168494 56168494 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005921.1 +1 validated p.E484* 1.000 146 0% 226 39.4% 1 100% - - - HMMSmart_RING,superfamily_SSF57850 MAP3K1 4214 genome.wustl.edu 37 5 56177542 56177542 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005921.1 +1 validated p.E839* 1.000 51 0% 97 38.1% 2 0% - - - NULL ACTBL2 345651 genome.wustl.edu 37 5 56778460 56778460 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001017992.2 -1 validated p.D25 0.251 77 0% 42 40.5% 0 - - - - HMMPfam_Actin,HMMSmart_SM00268,superfamily_Actin-like ATPase domain DEPDC1B 55789 genome.wustl.edu 37 5 59893588 59893588 + Nonsense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018369.2 -1 validated p.R528* 1.000 96 0% 188 28.2% 2 100% - - - NULL ELOVL7 79993 genome.wustl.edu 37 5 60050476 60050476 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001104558.1 -1 validated p.G274V 0.838 71 0% 210 37.6% 2 0% possibly_damaging(0.859) deleterious(0.01) deleterious(0.738) NULL PIK3R1 5295 genome.wustl.edu 37 5 67588951 67588951 + Nonsense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_181523.1 +1 reviewed p.R348* 1.000 47 0% 131 42% 45 22.2% - - - HMMPfam_SH2,HMMSmart_SM00252,superfamily_SH2 domain CENPH 64946 genome.wustl.edu 37 5 68504123 68504123 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_022909.3 +1 reviewed p.K196N 0.127 139 0% 161 42.2% 6 16.6% probably_damaging(0.995) deleterious(0.02) deleterious(0.841) HMMPfam_CENP-H MAP1B 4131 genome.wustl.edu 37 5 71491402 71491402 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005909.3 +1 validated p.K740N 1.000 61 0% 70 37.1% 1 0% unknown(0) tolerated(0.36) - NULL TNPO1 3842 genome.wustl.edu 37 5 72157727 72157727 + Missense_Mutation SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002270.3 +1 reviewed p.Y150H 1.000 168 0% 397 41.6% 3 33.3% benign(0.115) tolerated(0.29) neutral(0.038) HMMPfam_HEAT,superfamily_ARM repeat ANKRD31 256006 genome.wustl.edu 37 5 74506671 74506671 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000274361 -1 known p.R103Q 0.831 137 0% 144 44.4% 0 - benign(0) - - NULL SV2C 22987 genome.wustl.edu 37 5 75427717 75427717 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014979.1 +1 provisional p.R48W 1.000 76 0% 95 43.2% 0 - probably_damaging(0.998) deleterious(0) deleterious(0.919) superfamily_MFS_gen_substrate_transporter IQGAP2 10788 genome.wustl.edu 37 5 75907009 75907009 + Splice_Site SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006633.2 +1 validated e13+1 1.000 69 0% 210 36.2% 0 - - - - - PDE8B 8622 genome.wustl.edu 37 5 76714057 76714057 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003719.2 +1 validated p.S639R 1.000 11 0% 49 34.7% 5 20% possibly_damaging(0.901) tolerated(0.36) neutral(0.377) HMMPfam_PDEase_I,HMMSmart_SM00471,superfamily_HD-domain/PDEase-like AP3B1 8546 genome.wustl.edu 37 5 77330266 77330266 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003664.3 -1 reviewed p.S938F 1.000 39 0% 72 41.7% 16 43.7% possibly_damaging(0.449) tolerated(0.71) neutral(0.148) NULL VCAN 1462 genome.wustl.edu 37 5 82835822 82835822 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004385.4 +1 reviewed p.E2334* 0.021 54 0% 74 43.2% 3 33.3% - - - NULL RASA1 5921 genome.wustl.edu 37 5 86645108 86645108 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002890.1 +1 reviewed p.E394* 1.000 74 0% 108 43.5% 1 0% - - - HMMPfam_SH2,HMMSmart_SM00252,superfamily_SH2 domain CETN3 1070 genome.wustl.edu 37 5 89695331 89695331 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004365.2 -1 reviewed p.E102* 1.000 51 0% 160 40.6% 12 8.3% - - - HMMSmart_EFh,HMMPfam_efhand,superfamily_SSF47473 ARRDC3 57561 genome.wustl.edu 37 5 90669530 90669530 + Silent SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020801.2 -1 validated p.R387 1.000 23 0% 103 42.7% 40 50% - - - NULL ANKRD32 84250 genome.wustl.edu 37 5 93989081 93989081 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_032290.3 +1 validated p.E329D 0.058 147 0% 219 38.8% 1 0% benign(0) tolerated(1) - NULL MCTP1 79772 genome.wustl.edu 37 5 94288995 94288995 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000503301 -1 known p.E112* 1.000 197 0% 302 42.1% 2 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB) ERAP2 64167 genome.wustl.edu 37 5 96248459 96248459 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001130140.1 +1 validated p.L825 0.266 36 0% 132 30.3% 54 53.7% - - - NULL MAN2A1 4124 genome.wustl.edu 37 5 109152986 109152986 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002372.2 +1 reviewed p.V652 0.993 47 0% 142 44.4% 1 0% - - - superfamily_Gal_mut_like,HMMPfam_Glyco_hydro_38C MAN2A1 4124 genome.wustl.edu 37 5 109190936 109190936 + Missense_Mutation SNP C C A rs71929671 byCluster;by1000genomes TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002372.2 +1 reviewed p.F1024L 0.000 22 0% 90 63.3% 11 45.4% benign(0) tolerated(0.66) neutral(0.003) superfamily_Gal_mut_like,HMMPfam_Glyco_hydro_38C WDR36 134430 genome.wustl.edu 37 5 110441018 110441018 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_139281.2 +1 reviewed p.F407C 1.000 73 0% 110 35.5% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40 EPB41L4A 64097 genome.wustl.edu 37 5 111504476 111504476 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_022140.3 -1 validated p.S631Y 0.995 70 0% 163 39.3% 3 33.3% possibly_damaging(0.437) deleterious(0) deleterious(0.587) NULL MCC 4163 genome.wustl.edu 37 5 112364657 112364657 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001085377.1 -1 reviewed p.F951 0.187 27 0% 115 42.6% 0 - - - - HMMPfam_MCC-bdg_PDZ YTHDC2 64848 genome.wustl.edu 37 5 112862360 112862360 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_022828.3 +1 validated p.E185K 1.000 86 0% 102 44.1% 0 - benign(0) tolerated(0.43) neutral(0.013) NULL PPIC 5480 genome.wustl.edu 37 5 122364492 122364492 + Silent SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000943.4 -1 reviewed p.I101 1.000 47 0% 126 42.1% 94 36.1% - - - HMMPfam_Pro_isomerase,superfamily_Cyclophilin-like CEP120 153241 genome.wustl.edu 37 5 122685651 122685651 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_153223.3 -1 reviewed p.N905H 1.000 80 0% 196 42.3% 7 28.5% probably_damaging(0.996) tolerated(0.06) deleterious(0.784) NULL CEP120 153241 genome.wustl.edu 37 5 122700210 122700210 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_153223.3 -1 reviewed p.E854* 1.000 57 0% 75 57.3% 0 - - - - NULL CSNK1G3 1456 genome.wustl.edu 37 5 122923797 122923797 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001044723.1 +1 validated p.H237N 1.000 109 0% 303 35.6% 5 40% probably_damaging(0.999) deleterious(0) deleterious(0.935) superfamily_Kinase_like,HMMPfam_Pkinase ZNF608 57507 genome.wustl.edu 37 5 123982611 123982611 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020747.2 -1 validated p.A1156T 1.000 50 0% 170 41.8% 6 33.3% benign(0.141) deleterious(0.01) neutral(0.418) NULL FBN2 2201 genome.wustl.edu 37 5 127624140 127624140 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001999.3 -1 reviewed p.M2249I 1.000 42 0% 122 45.9% 6 16.6% possibly_damaging(0.876) tolerated(0.11) deleterious(0.613) HMMSmart_SM00179,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,PatternScan_EGF_2,HMMPfam_EGF_CA,superfamily_EGF/Laminin ADAMTS19 171019 genome.wustl.edu 37 5 128862051 128862051 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_133638.3 +1 reviewed p.E324* 1.000 58 0% 98 37.8% 0 - - - - "superfamily_Metalloproteases (""zincins"") catalytic domain" IL5 3567 genome.wustl.edu 37 5 131879050 131879050 + Nonsense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000879.2 -1 reviewed p.R41* 0.007 41 0% 130 35.4% 0 - - - - HMMPfam_IL5,superfamily_4_helix_cytokine DDX46 9879 genome.wustl.edu 37 5 134109385 134109385 + Splice_Site SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014829.2 +1 reviewed e5-1 1.000 136 0% 227 38.8% 0 - - - - - C5orf24 134553 genome.wustl.edu 37 5 134190815 134190815 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001135586.1 +1 validated p.K75N 1.000 50 0% 57 43.9% 12 50% probably_damaging(0.957) tolerated(0.06) deleterious(0.723) NULL TGFBI 7045 genome.wustl.edu 37 5 135391397 135391397 + Missense_Mutation SNP C C T rs192398905 by1000genomes TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000358.2 +1 reviewed p.A480V 0.998 22 0% 63 50.8% 23 13% benign(0.021) tolerated(1) neutral(0.001) HMMPfam_Fasciclin,HMMSmart_SM00554,superfamily_FAS1 domain CTNNA1 1495 genome.wustl.edu 37 5 138117611 138117611 + Splice_Site SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001903.2 +1 validated e1-1 1.000 23 0% 83 41% 0 - - - - - SLC23A1 9963 genome.wustl.edu 37 5 138707860 138707860 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152685.3 -1 reviewed p.Y548 0.721 57 1.8% 138 43.5% 19 68.4% - - - NULL PCDHA10 56139 genome.wustl.edu 37 5 140238080 140238080 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_031859.1 +1 reviewed p.R816H 0.000 104 0% 274 40.1% 0 - - - - NULL PCDHB4 56131 genome.wustl.edu 37 5 140501597 140501597 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018938.2 +1 reviewed p.R6I 0.013 34 0% 191 38.7% 0 - benign(0.114) deleterious(0.01) neutral(0.415) NULL PCDHGB1 56104 genome.wustl.edu 37 5 140730136 140730136 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018922.2 +1 reviewed p.F103 0.658 34 0% 106 40.6% 0 - - - - HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like PCDHGA5 56110 genome.wustl.edu 37 5 140744962 140744962 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018918.2 +1 reviewed p.S355 0.000 26 0% 72 37.5% 1 0% - - - HMMPfam_Cadherin,superfamily_Cadherin-like PCDHGB3 56102 genome.wustl.edu 37 5 140750183 140750183 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018924.2 +1 reviewed p.F74L 0.047 11 0% 35 31.4% 0 - - - - HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like PCDHGB3 56102 genome.wustl.edu 37 5 140750741 140750741 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018924.2 +1 reviewed p.S260 0.000 33 0% 31 54.8% 0 - - - - HMMPfam_Cadherin,superfamily_Cadherin-like PCDHGA6 56109 genome.wustl.edu 37 5 140754084 140754084 + Missense_Mutation SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018919.2 +1 reviewed p.N145S 0.993 30 0% 69 29% 0 - benign(0.001) tolerated(1) - HMMPfam_Cadherin,superfamily_Cadherin-like PCDHGA6 56109 genome.wustl.edu 37 5 140754514 140754514 + Silent SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018919.2 +1 reviewed p.I288 0.906 16 0% 71 35.2% 0 - - - - HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like KIAA0141 9812 genome.wustl.edu 37 5 141314128 141314128 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001142603.1 +1 validated p.L376I 0.606 24 0% 71 39.4% 32 43.7% benign(0.055) deleterious(0.05) neutral(0.349) HMMPfam_Sel1,HMMSmart_SEL1,superfamily_SSF81901 DPYSL3 1809 genome.wustl.edu 37 5 146780396 146780396 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001387.2 -1 validated p.S323 0.999 22 0% 74 43.2% 3 0% - - - HMMPfam_Amidohydro_1,superfamily_Metalo_hydrolase,superfamily_SSF51556 JAKMIP2 9832 genome.wustl.edu 37 5 147051353 147051353 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014790.3 -1 provisional p.R6Q 1.000 27 0% 180 38.3% 0 - probably_damaging(1) deleterious(0.02) deleterious(0.883) NULL SPINK14 408187 genome.wustl.edu 37 5 147553882 147553882 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001001325.1 +1 provisional p.G66D 0.905 47 0% 109 37.6% 1 100% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Kazal_1,HMMSmart_KAZAL,PatternScan_KAZAL,superfamily_SSF100895 SH3TC2 79628 genome.wustl.edu 37 5 148407675 148407675 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024577.3 -1 reviewed p.R540 0.999 10 0% 21 38.1% 0 - - - - HMMSmart_SM00028,superfamily_TPR-like SLC26A2 1836 genome.wustl.edu 37 5 149360933 149360933 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000112.3 +1 reviewed p.E593* 1.000 44 0% 113 33.6% 3 100% - - - HMMPfam_STAS,superfamily_STAS TIGD6 81789 genome.wustl.edu 37 5 149374431 149374431 + Nonsense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_030953.2 -1 validated p.L494* 0.999 96 0% 176 48.9% 10 50% - - - NULL ZNF300 91975 genome.wustl.edu 37 5 150275515 150275515 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_052860.2 -1 reviewed p.R429I 1.000 60 0% 68 35.3% 8 37.5% probably_damaging(1) tolerated(0.06) deleterious(0.823) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers FAM114A2 10827 genome.wustl.edu 37 5 153413414 153413414 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018691.2 -1 validated p.A114T 1.000 40 0% 124 45.2% 2 0% probably_damaging(1) tolerated(0.09) deleterious(0.796) HMMPfam_DUF719 KIF4B 285643 genome.wustl.edu 37 5 154394629 154394629 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001099293.1 +1 provisional p.R404S 0.050 68 0% 167 38.9% 0 - benign(0.226) deleterious(0.03) neutral(0.387) NULL ATP10B 23120 genome.wustl.edu 37 5 160025945 160025945 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_025153.2 -1 validated p.F1132L 1.000 37 0% 62 46.8% 0 - benign(0.31) tolerated(0.65) neutral(0.100) NULL GABRA1 2554 genome.wustl.edu 37 5 161302642 161302642 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000806.5 +1 reviewed p.G185* 1.000 88 0% 197 44.2% 0 - - - - HMMPfam_Neur_chan_LBD,superfamily_Neur_chan_LBD GABRG2 2566 genome.wustl.edu 37 5 161578742 161578742 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_198903.2 +1 reviewed p.R419W 1.000 91 0% 158 32.3% 0 - benign(0.002) deleterious(0.01) neutral(0.406) HMMPfam_Neur_chan_memb,superfamily_Neurotransmitter-gated ion-channel transmembrane pore GABRG2 2566 genome.wustl.edu 37 5 161580244 161580244 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_198903.2 +1 reviewed p.R473Q 1.000 35 0% 144 40.3% 0 - benign(0.098) tolerated(0.27) neutral(0.041) HMMPfam_Neur_chan_memb,superfamily_Neurotransmitter-gated ion-channel transmembrane pore DOCK2 1794 genome.wustl.edu 37 5 169435550 169435550 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004946.2 +1 validated p.S1041Y 1.000 55 0% 194 39.7% 0 - probably_damaging(0.977) deleterious(0.01) deleterious(0.825) NULL DRD1 1812 genome.wustl.edu 37 5 174869327 174869327 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000794.3 -1 reviewed p.S259F 1.000 58 0% 99 39.4% 0 - possibly_damaging(0.893) deleterious(0.01) deleterious(0.758) HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like SFXN1 94081 genome.wustl.edu 37 5 174936069 174936069 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_022754.5 +1 validated p.E67* 1.000 47 0% 110 44.5% 19 15.7% - - - HMMPfam_Mtc ZNF354B 117608 genome.wustl.edu 37 5 178311278 178311278 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_058230.2 +1 validated p.D609N 0.000 52 0% 74 47.3% 3 33.3% benign(0) tolerated(0.75) neutral(0.002) NULL ZNF454 285676 genome.wustl.edu 37 5 178392054 178392054 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_182594.2 +1 validated p.E217* 0.675 88 0% 87 48.3% 0 - - - - HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers ZNF354C 30832 genome.wustl.edu 37 5 178506634 178506634 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014594.1 +1 provisional p.E401K 0.001 64 0% 108 35.2% 0 - benign(0.021) tolerated(0.39) neutral(0.017) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 ZFP62 643836 genome.wustl.edu 37 5 180276852 180276852 + Missense_Mutation SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152283.4 -1 validated p.L488P 1.000 75 0% 142 41.5% 3 33.3% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers TRIM7 81786 genome.wustl.edu 37 5 180622561 180622561 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_203293.1 -1 reviewed p.D381N 0.981 10 0.000 9 0.444 1 100% probably_damaging(0.999) tolerated(0.47) deleterious(0.501) HMMSmart_SM00589 TRIM41 90933 genome.wustl.edu 37 5 180651717 180651717 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_033549.3 +1 validated p.V240I 1.000 33 0% 46 37% 19 57.8% possibly_damaging(0.891) deleterious(0.01) deleterious(0.756) HMMPfam_zf-B_box,HMMSmart_SM00336 RIPK1 8737 genome.wustl.edu 37 6 3111039 3111039 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003804.3 +1 validated p.E527* 0.357 45 0% 118 42.4% 3 0% - - - NULL PSMG4 389362 genome.wustl.edu 37 6 3290211 3290211 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000454610 +1 known p.E106* 0.000 24 0% 30 33.3% 0 - unknown(0) - - NULL MUTED 63915 genome.wustl.edu 37 6 8062775 8062775 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_201280.1 -1 reviewed p.E63* 1.000 74 0% 108 33.3% 0 - - - - NULL KIF13A 63971 genome.wustl.edu 37 6 17809140 17809140 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000358380 -1 known p.A68V 1.000 30 0% 125 33.6% 1 0% - - - NULL NHLRC1 378884 genome.wustl.edu 37 6 18122080 18122080 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_198586.2 -1 reviewed p.R253I 0.075 11 0% 13 38.5% 6 50% possibly_damaging(0.66) tolerated(0.05) deleterious(0.579) superfamily_SSF101898 FAM65B 9750 genome.wustl.edu 37 6 24809984 24809984 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014722.2 -1 validated p.E1023* 1.000 43 0% 120 38.3% 7 42.8% - - - superfamily_ARM repeat SLC17A3 10786 genome.wustl.edu 37 6 25849630 25849630 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001098486.1 -1 validated p.P445H 0.824 49 0% 126 42.9% 0 - probably_damaging(0.996) deleterious(0) deleterious(0.906) HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter SLC17A3 10786 genome.wustl.edu 37 6 25851022 25851022 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001098486.1 -1 validated p.E266* 0.991 122 0% 342 43.6% 0 - - - - HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter HIST1H3C 8352 genome.wustl.edu 37 6 26046006 26046006 + Missense_Mutation SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003531.2 +1 reviewed p.K123R 1.000 8 0.000 36 0.444 2 0% benign(0.017) - - HMMSmart_SM00428,HMMPfam_Histone,superfamily_Histone-fold BTN3A1 11119 genome.wustl.edu 37 6 26408108 26408108 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_007048.5 +1 validated p.G215R 0.000 49 0% 151 39.7% 15 60% benign(0.345) deleterious(0.04) neutral(0.458) superfamily_Immunoglobulin GPX5 2880 genome.wustl.edu 37 6 28500178 28500178 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001509.2 +1 reviewed p.K147T 0.330 89 0% 234 35.5% 0 - benign(0.202) tolerated(0.08) neutral(0.320) HMMPfam_GSHPx,superfamily_Thiordxn-like_fd SCAND3 114821 genome.wustl.edu 37 6 28542772 28542772 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_052923.1 -1 provisional p.E570D 1.000 51 0% 116 47.4% 0 - possibly_damaging(0.892) deleterious(0) deleterious(0.796) NULL SCAND3 114821 genome.wustl.edu 37 6 28543325 28543325 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_052923.1 -1 provisional p.P386H 1.000 73 0% 106 41.5% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_rve,superfamily_RNaseH_fold SRPK1 6732 genome.wustl.edu 37 6 35803246 35803246 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003137.3 -1 reviewed p.T601 0.998 36 0% 104 33.7% 16 56.2% - - - HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase PNPLA1 285848 genome.wustl.edu 37 6 36270234 36270234 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001145716.1 +1 validated p.E372* 0.013 59 0% 63 31.7% 0 - - - - NULL FRS3 10817 genome.wustl.edu 37 6 41739180 41739180 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006653.3 -1 reviewed p.F219C 0.939 13 0% 22 36.4% 1 0% benign(0.034) tolerated(0.11) neutral(0.274) NULL HSP90AB1 3326 genome.wustl.edu 37 6 44218201 44218201 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_007355.2 +1 provisional p.E274D 1.000 82 0% 107 42.1% 311 41.1% possibly_damaging(0.609) deleterious(0.02) deleterious(0.594) HMMPfam_HSP90 TDRD6 221400 genome.wustl.edu 37 6 46660908 46660908 + Silent SNP T T A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001010870.2 +1 validated p.I1681 0.008 48 0% 73 45.2% 0 - - - - NULL TFAP2B 7021 genome.wustl.edu 37 6 50803903 50803903 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003221.3 +1 reviewed p.S244L 1.000 29 0% 78 34.6% 0 - possibly_damaging(0.915) deleterious(0.01) deleterious(0.772) HMMPfam_TF_AP-2 GSTA5 221357 genome.wustl.edu 37 6 52698961 52698961 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_153699.1 -1 provisional p.R131H 0.338 123 0% 506 37.2% 0 - benign(0.101) deleterious(0) neutral(0.452) HMMPfam_GST_C,superfamily_GST_C_like LRRC1 55227 genome.wustl.edu 37 6 53764644 53764644 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018214.4 +1 validated p.L248V 1.000 62 0% 228 43% 11 27.2% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00364,superfamily_L domain-like GFRAL 389400 genome.wustl.edu 37 6 55192355 55192355 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_207410.2 +1 validated p.M1I 0.880 136 0% 446 38.8% 0 - possibly_damaging(0.586) deleterious(0) deleterious(0.647) NULL GFRAL 389400 genome.wustl.edu 37 6 55264058 55264058 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_207410.2 +1 validated p.H345N 0.621 38 0% 81 39.5% 0 - benign(0) tolerated(0.6) neutral(0.004) NULL BMP5 653 genome.wustl.edu 37 6 55739521 55739521 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_021073.2 -1 reviewed p.R48I 1.000 57 0% 124 45.2% 0 - probably_damaging(0.995) deleterious(0) deleterious(0.902) HMMPfam_TGFb_propeptide DST 667 genome.wustl.edu 37 6 56417413 56417413 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015548.4 -1 reviewed p.E2770K 1.000 32 0% 77 27.3% 0 - probably_damaging(0.998) - - HMMSmart_SM00150,superfamily_Spectrin repeat DST 667 genome.wustl.edu 37 6 56417979 56417979 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015548.4 -1 reviewed p.S2581Y 0.122 88 0% 237 34.6% 0 - probably_damaging(0.991) - - HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat DST 667 genome.wustl.edu 37 6 56438544 56438544 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015548.4 -1 reviewed p.S1767Y 0.997 47 0% 141 37.6% 0 - probably_damaging(0.991) - - HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat DST 667 genome.wustl.edu 37 6 56468917 56468917 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000370769 -1 known p.E3292D 0.000 123 0% 126 35.7% 0 - possibly_damaging(0.643) tolerated(0.13) deleterious(0.478) NULL LGSN 51557 genome.wustl.edu 37 6 63989954 63989954 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_016571.2 -1 reviewed p.R501I 1.000 88 0% 131 38.2% 0 - probably_damaging(0.989) tolerated(0.05) deleterious(0.785) superfamily_Glutamine synthetase/guanido kinase EYS 346007 genome.wustl.edu 37 6 65301640 65301640 + Nonsense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001142800.1 -1 reviewed p.R1374* 0.001 48 0% 64 43.8% 0 - - - - superfamily_Concanavalin A-like lectins/glucanases COL19A1 1310 genome.wustl.edu 37 6 70897900 70897900 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001858.4 +1 reviewed p.S993F 0.810 23 0% 33 39.4% 0 - probably_damaging(0.964) tolerated(0.09) deleterious(0.703) HMMPfam_Collagen FAM135A 57579 genome.wustl.edu 37 6 71235264 71235264 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001105531.2 +1 validated p.S630I 1.000 36 0% 67 40.3% 1 100% probably_damaging(0.998) deleterious(0) deleterious(0.919) NULL EEF1A1 1915 genome.wustl.edu 37 6 74229115 74229115 + Missense_Mutation SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001402.5 -1 reviewed p.I90T 1.000 56 0% 114 36% 6743 47.5% benign(0.002) deleterious(0.02) neutral(0.383) HMMPfam_GTP_EFTU,superfamily_P-loop containing nucleoside triphosphate hydrolases IMPG1 3617 genome.wustl.edu 37 6 76660415 76660415 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001563.2 -1 provisional p.S563Y 0.993 23 0% 36 16.7% 0 - probably_damaging(0.968) tolerated(0.14) deleterious(0.659) superfamily_SSF82671 PHIP 55023 genome.wustl.edu 37 6 79664566 79664566 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_017934.5 -1 validated p.P1340S 1.000 45 0% 136 33.1% 4 75% probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain,PatternScan_BROMODOMAIN_1 LCA5 167691 genome.wustl.edu 37 6 80197569 80197569 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001122769.2 -1 reviewed p.E416* 0.641 252 0% 334 36.8% 2 50% - - - NULL LCA5 167691 genome.wustl.edu 37 6 80202322 80202322 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001122769.2 -1 reviewed p.R301C 1.000 222 0% 357 45.7% 1 0% probably_damaging(1) deleterious(0) deleterious(0.945) NULL TTK 7272 genome.wustl.edu 37 6 80723019 80723019 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003318.4 +1 reviewed p.R307Q 0.989 51 0% 113 33.6% 2 100% benign(0.366) tolerated(0.08) neutral(0.416) NULL TTK 7272 genome.wustl.edu 37 6 80749510 80749510 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003318.4 +1 reviewed p.K743T 0.998 62 0% 99 37.4% 5 60% probably_damaging(1) deleterious(0.03) deleterious(0.865) HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase IBTK 25998 genome.wustl.edu 37 6 82941445 82941445 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015525.2 -1 reviewed p.Y178S 1.000 34 0% 120 45% 3 100% possibly_damaging(0.541) tolerated(0.87) neutral(0.184) superfamily_RCC1/BLIP-II ZNF292 23036 genome.wustl.edu 37 6 87971363 87971363 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015021.1 +1 validated p.K2672 1.000 39 0% 52 48.1% 12 50% - - - NULL MDN1 23195 genome.wustl.edu 37 6 90418265 90418265 + Silent SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014611.1 -1 provisional p.Q2616 0.042 33 0% 147 34% 0 - - - - NULL EPHA7 2045 genome.wustl.edu 37 6 93967841 93967841 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004440.3 -1 reviewed p.H696N 1.000 60 0% 160 43.1% 2 100% possibly_damaging(0.786) deleterious(0) deleterious(0.739) HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like) POU3F2 5454 genome.wustl.edu 37 6 99283852 99283852 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005604.2 +1 validated p.A368V 1.000 20 0% 52 38.5% 0 - benign(0.32) tolerated(0.16) neutral(0.160) HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like HACE1 57531 genome.wustl.edu 37 6 105232942 105232942 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020771.3 -1 validated p.D443Y 1.000 33 0% 138 47.8% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) NULL AIM1 202 genome.wustl.edu 37 6 106969219 106969219 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001624.2 +1 validated p.S971* 0.033 60 0% 106 39.6% 0 - - - - NULL SEC63 11231 genome.wustl.edu 37 6 108214773 108214773 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000423697 -1 known p.E389* 1.000 121 0% 439 37.1% 4 25% - - - HMMPfam_Sec63,HMMSmart_SM00611 ARMC2 84071 genome.wustl.edu 37 6 109294665 109294665 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_032131.4 +1 validated p.R851Q 0.659 55 0% 115 40.9% 6 66.6% probably_damaging(0.992) tolerated(0.08) deleterious(0.748) superfamily_ARM-type_fold PPIL6 285755 genome.wustl.edu 37 6 109748351 109748351 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000417394 -1 known p.R91C 1.000 150 0% 211 40.3% 12 0% - - - HMMPfam_Pro_isomerase,superfamily_Cyclophilin-like AKD1 221264 genome.wustl.edu 37 6 109867219 109867219 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000424296 -1 known p.L105I 1.000 32 0% 126 31% 0 - probably_damaging(1) tolerated(0.1) deleterious(0.786) superfamily_SSF52540 FIG4 9896 genome.wustl.edu 37 6 110036282 110036282 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014845.5 +1 reviewed p.R23I 1.000 108 0% 202 33.2% 3 33.3% probably_damaging(1) deleterious(0) deleterious(0.945) NULL SLC16A10 117247 genome.wustl.edu 37 6 111498656 111498656 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018593.4 +1 validated p.L244I 1.000 47 0% 149 36.2% 0 - benign(0.057) tolerated(0.31) neutral(0.030) HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter REV3L 5980 genome.wustl.edu 37 6 111680076 111680076 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002912.3 -1 validated p.E2341* 1.000 29 0% 189 39.7% 1 0% - - - HMMSmart_SM00486,superfamily_Ribonuclease H-like LAMA4 3910 genome.wustl.edu 37 6 112438973 112438973 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001105206.1 -1 reviewed p.Y1650* 1.000 39 0% 108 47.2% 6 0% - - - superfamily_Concanavalin A-like lectins/glucanases LAMA4 3910 genome.wustl.edu 37 6 112441659 112441659 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001105206.1 -1 reviewed p.R1498C 1.000 34 0% 77 36.4% 4 50% probably_damaging(0.997) tolerated(0.08) deleterious(0.766) HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases COL10A1 1300 genome.wustl.edu 37 6 116441557 116441557 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000493.3 -1 reviewed p.I574M 0.807 27 0% 102 43.1% 0 - probably_damaging(0.967) deleterious(0.02) deleterious(0.792) HMMPfam_C1q,HMMSmart_SM00110,superfamily_TNF-like FAM26E 254228 genome.wustl.edu 37 6 116837113 116837113 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_153711.2 +1 validated p.E297 1.000 17 0% 33 42.4% 0 - - - - NULL ROS1 6098 genome.wustl.edu 37 6 117715410 117715410 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002944.2 -1 reviewed p.R360I 0.180 35 0% 60 33.3% 0 - possibly_damaging(0.84) tolerated(0.21) neutral(0.365) HMMSmart_LY,superfamily_SSF63825 DCBLD1 285761 genome.wustl.edu 37 6 117841011 117841011 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_173674.1 +1 provisional p.E120* 0.974 43 0% 167 42.5% 2 50% - - - HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain TRDN 10345 genome.wustl.edu 37 6 123869741 123869741 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006073.2 -1 validated p.K83 1.000 24 0% 71 45.1% 0 - - - - HMMPfam_Triadin NCOA7 135112 genome.wustl.edu 37 6 126210307 126210307 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_181782.3 +1 validated p.E369D 0.000 33 0% 42 42.9% 0 - benign(0) tolerated(0.3) neutral(0.029) NULL LAMA2 3908 genome.wustl.edu 37 6 129371193 129371193 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000426.3 +1 reviewed p.P81 0.020 64 0% 256 46.5% 0 - - - - HMMPfam_Laminin_N,HMMSmart_LamNT,superfamily_Gal_bind_like LAMA2 3908 genome.wustl.edu 37 6 129381025 129381025 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000426.3 +1 reviewed p.T127I 0.998 58 0% 175 36% 0 - possibly_damaging(0.835) deleterious(0) deleterious(0.763) HMMPfam_Laminin_N,HMMSmart_LamNT,superfamily_Gal_bind_like LAMA2 3908 genome.wustl.edu 37 6 129419352 129419352 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000426.3 +1 reviewed p.A144V 0.998 9 0.000 78 0.526 0 - probably_damaging(0.972) deleterious(0) deleterious(0.859) HMMPfam_Laminin_N,HMMSmart_LamNT,superfamily_Gal_bind_like LAMA2 3908 genome.wustl.edu 37 6 129712756 129712756 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000426.3 +1 reviewed p.K1731T 1.000 137 0% 259 39% 0 - benign(0.001) tolerated(0.12) neutral(0.261) superfamily_ConA_like_lec_gl,HMMPfam_Laminin_I SAMD3 154075 genome.wustl.edu 37 6 130505749 130505749 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001017373.2 -1 validated p.L135I 0.639 35 0% 167 37.1% 0 - benign(0.047) tolerated(0.15) neutral(0.244) NULL TAAR1 134864 genome.wustl.edu 37 6 132966569 132966569 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_138327.1 -1 provisional p.V192I 0.000 52 0% 77 39% 1 0% benign(0.006) tolerated(0.15) neutral(0.241) HMMPfam_7tm_1,superfamily_SSF81321 VNN1 8876 genome.wustl.edu 37 6 133013437 133013437 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004666.2 -1 reviewed p.E371D 0.998 21 0% 67 41.8% 2 100% benign(0) tolerated(0.29) neutral(0.029) NULL TBPL1 9519 genome.wustl.edu 37 6 134305591 134305591 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004865.2 +1 reviewed p.F120L 1.000 58 0% 112 43.8% 16 37.5% benign(0.11) tolerated(0.56) neutral(0.015) HMMPfam_TBP,superfamily_TATA-box binding protein-like HBS1L 10767 genome.wustl.edu 37 6 135307889 135307889 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006620.3 -1 reviewed p.K430 1.000 94 0% 93 31.2% 8 50% - - - HMMPfam_GTP_EFTU,superfamily_P-loop containing nucleoside triphosphate hydrolases HBS1L 10767 genome.wustl.edu 37 6 135358048 135358048 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001145207.1 -1 reviewed p.R516Q 0.604 39 0% 103 44.7% 0 - benign(0) tolerated(0.17) neutral(0.059) NULL ECT2L 345930 genome.wustl.edu 37 6 139223733 139223733 + Missense_Mutation SNP G G A rs181439920 by1000genomes TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001077706.1 +1 validated p.R895Q 0.134 60 0% 161 39.8% 4 0% benign(0) tolerated(1) - superfamily_SSF50729 REPS1 85021 genome.wustl.edu 37 6 139228653 139228653 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_031922.3 -1 validated p.S766 1.000 109 0% 276 38.4% 58 36.2% - - - NULL SF3B5 83443 genome.wustl.edu 37 6 144416487 144416487 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_031287.2 -1 validated p.L50I 1.000 21 0% 54 37% 534 48.1% benign(0.052) deleterious(0.01) neutral(0.409) HMMPfam_SF3b10 GRM1 2911 genome.wustl.edu 37 6 146747708 146747708 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001114329.1 +1 reviewed p.E892* 1.000 38 0% 96 36.5% 0 - - - - NULL C6orf72 116254 genome.wustl.edu 37 6 149893422 149893422 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_138785.3 +1 predicted p.D41A 0.899 100 0% 261 41.8% 13 53.8% possibly_damaging(0.896) deleterious(0.04) deleterious(0.702) NULL AKAP12 9590 genome.wustl.edu 37 6 151673794 151673794 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005100.3 +1 reviewed p.A1423V 0.027 36 0% 78 34.6% 2 50% benign(0.004) deleterious(0) neutral(0.445) NULL SYNE1 23345 genome.wustl.edu 37 6 152565761 152565761 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_182961.2 -1 reviewed p.E6535* 1.000 44 0% 205 38.5% 0 - - - - superfamily_Spectrin repeat SYNE1 23345 genome.wustl.edu 37 6 152765652 152765652 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_182961.2 -1 reviewed p.S1244Y 1.000 86 0% 215 34.9% 0 - possibly_damaging(0.712) deleterious(0.02) deleterious(0.641) NULL TULP4 56995 genome.wustl.edu 37 6 158910717 158910717 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020245.3 +1 validated p.K528N 1.000 60 0% 192 36.5% 2 0% probably_damaging(0.981) deleterious(0.01) deleterious(0.831) NULL PDE10A 10846 genome.wustl.edu 37 6 165756987 165756987 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001130690.1 -1 validated p.R664C 1.000 34 0% 84 44% 0 - possibly_damaging(0.887) deleterious(0.02) deleterious(0.730) HMMPfam_PDEase_I,HMMSmart_HDc,superfamily_SSF109604 LOC100132858 100132858 genome.wustl.edu 37 7 19850 19850 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XM_001715131.2 -1 model p.K378T 0.030 83 0% 249 18.5% 0 - - - - NULL LOC100290924 100290924 genome.wustl.edu 37 7 796586 796586 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XM_002346938.1 -1 model p.D6N 0.011 19 0% 28 25% 36 41.6% - - - PatternScan_ZINC_FINGER_C2H2_1 RSPH10B2 728194 genome.wustl.edu 37 7 6819348 6819348 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001099697.1 +1 provisional p.E508* 1.000 202 0% 485 21.9% 0 - - - - NULL DGKB 1607 genome.wustl.edu 37 7 14775684 14775684 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004080.2 -1 reviewed p.P102S 1.000 31 0% 62 48.4% 0 - benign(0) tolerated(0.54) neutral(0.007) superfamily_EF-hand ABCB5 340273 genome.wustl.edu 37 7 20683096 20683096 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000404938 +1 known p.K173N 1.000 74 0% 190 38.4% 0 - possibly_damaging(0.819) deleterious(0) deleterious(0.754) HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain DNAH11 8701 genome.wustl.edu 37 7 21598550 21598550 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003777.3 +1 reviewed p.R209I 1.000 76 0% 71 38% 1 0% probably_damaging(0.983) deleterious(0.02) deleterious(0.812) NULL DNAH11 8701 genome.wustl.edu 37 7 21654749 21654749 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003777.3 +1 reviewed p.E1290 0.911 45 0% 173 43.4% 5 40% - - - NULL ENSG00000105889 0 genome.wustl.edu 37 7 22532348 22532348 + Missense_Mutation SNP C C G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000441815 -1 known p.V347L 1.000 133 0% 359 32.6% 2 0% probably_damaging(0.999) deleterious(0.02) deleterious(0.873) NULL ENSG00000105889 0 genome.wustl.edu 37 7 22534400 22534400 + Silent SNP G G A rs186012263 by1000genomes TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000441815 -1 known p.N172 0.640 424 0% 598 37.8% 0 - - - - NULL NUPL2 11097 genome.wustl.edu 37 7 23236315 23236315 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_007342.2 +1 validated p.R180H 1.000 168 0% 283 40.6% 19 47.3% benign(0.149) deleterious(0.02) neutral(0.396) NULL IGF2BP3 10643 genome.wustl.edu 37 7 23353250 23353250 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006547.2 -1 reviewed p.K473T 1.000 145 0% 246 35.8% 1 100% probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_SM00322,superfamily_Eukaryotic type KH-domain (KH-domain type I) CYCS 54205 genome.wustl.edu 37 7 25163357 25163357 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018947.4 -1 reviewed p.D94A 1.000 53 0% 88 46.6% 86 48.8% benign(0.036) deleterious(0) neutral(0.447) HMMPfam_Cytochrom_C,superfamily_Cytochrome c CHN2 1124 genome.wustl.edu 37 7 29519910 29519910 + Nonsense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004067.2 +1 reviewed p.R198* 0.997 75 0% 246 33.3% 1 0% - - - superfamily_Cysteine-rich domain LOC100287825 100287825 genome.wustl.edu 37 7 30564103 30564103 + Splice_Site SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XM_002342697.1 -1 model e2-1 0.005 10 0% 43 44.2% 0 - - - - - CCDC129 223075 genome.wustl.edu 37 7 31692201 31692201 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_194300.2 +1 validated p.E965* 0.998 19 0% 32 37.5% 4 75% - - - NULL TRGV9 6983 genome.wustl.edu 37 7 38356829 38356829 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000444775 -1 known p.A52V 0.003 18 0% 125 36% 1 0% benign(0) tolerated(0.07) neutral(0.319) HMMSmart_IGv,HMMPfam_V-set,superfamily_SSF48726 GLI3 2737 genome.wustl.edu 37 7 42063091 42063091 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000168.5 -1 reviewed p.F491 0.997 30 0% 149 38.3% 0 - - - - HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers ABCA13 154664 genome.wustl.edu 37 7 48313418 48313418 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152701.3 +1 reviewed p.E1385D 0.007 53 0% 115 40% 0 - benign(0.404) - - NULL ZPBP 11055 genome.wustl.edu 37 7 50121488 50121488 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_007009.2 -1 validated p.A72 0.765 28 0% 109 50.5% 0 - - - - NULL IKZF1 10320 genome.wustl.edu 37 7 50444306 50444306 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000331340 +1 known p.A79V 1.000 64 0% 182 39.6% 0 - probably_damaging(1) tolerated(0.25) deleterious(0.537) NULL LANCL2 55915 genome.wustl.edu 37 7 55499001 55499001 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018697.3 +1 validated p.S447 0.002 45 0% 65 35.4% 24 33.3% - - - NULL ZNF117 51351 genome.wustl.edu 37 7 64439218 64439218 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015852.3 -1 validated p.T244I 0.998 65 0% 156 41.7% 1 0% possibly_damaging(0.582) deleterious(0.03) deleterious(0.565) superfamily_C2H2 and C2HC zinc fingers ZNF92 168374 genome.wustl.edu 37 7 64863308 64863308 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152626.2 +1 validated p.S94Y 0.062 101 0% 151 46.4% 2 100% benign(0.03) tolerated(0.08) neutral(0.301) NULL VKORC1L1 154807 genome.wustl.edu 37 7 65419353 65419354 + In_Frame_Ins INS - - TTA novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000434382 +1 known p.167in_frame_insI 0.994:0.999 - - - - - - - - - NULL ELN 2006 genome.wustl.edu 37 7 73480061 73480061 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000501.2 +1 reviewed p.Y677* 0.938 26 0% 69 43.5% 7 28.5% - - - NULL PTPN12 5782 genome.wustl.edu 37 7 77230111 77230111 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002835.3 +1 reviewed p.C228F 1.000 51 0% 135 39.3% 18 72.2% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Y_phosphatase,HMMSmart_PTPc,superfamily_SSF52799 RSBN1L 222194 genome.wustl.edu 37 7 77379139 77379139 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_198467.2 +1 validated p.E368K 0.999 76 0% 131 41.2% 2 0% probably_damaging(0.953) deleterious(0.01) deleterious(0.802) NULL PCLO 27445 genome.wustl.edu 37 7 82582323 82582323 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_033026.5 -1 validated p.S2649Y 0.000 44 0% 58 27.6% 0 - probably_damaging(0.961) - - NULL SEMA3D 223117 genome.wustl.edu 37 7 84636126 84636126 + Nonsense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152754.2 -1 validated p.R634* 0.994 45 0% 101 47.5% 5 40% - - - HMMSmart_IG,HMMPfam_V-set,superfamily_SSF48726 KIAA1324L 222223 genome.wustl.edu 37 7 86522240 86522240 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001142749.2 -1 validated p.Q954H 0.996 33 0% 64 32.8% 0 - possibly_damaging(0.843) deleterious(0.02) deleterious(0.706) NULL SLC25A40 55972 genome.wustl.edu 37 7 87465581 87465581 + Nonsense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018843.2 -1 validated p.R334* 0.000 22 0% 54 50% 8 37.5% - - - NULL AKAP9 10142 genome.wustl.edu 37 7 91706314 91706314 + Nonsense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005751.4 +1 reviewed p.L2253* 1.000 81 0% 80 42.5% 0 - - - - NULL AKAP9 10142 genome.wustl.edu 37 7 91709179 91709179 + Missense_Mutation SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005751.4 +1 reviewed p.S2578P 0.416 70 0% 100 41% 0 - probably_damaging(0.995) tolerated(0.07) deleterious(0.776) NULL ENSG00000240720 0 genome.wustl.edu 37 7 91793345 91793345 + Missense_Mutation SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000430130 -1 known p.I391T 0.999 97 0% 107 39.3% 0 - probably_damaging(0.998) deleterious(0) deleterious(0.919) HMMSmart_SM00369,superfamily_L domain-like PEX1 5189 genome.wustl.edu 37 7 92116800 92116800 + Nonsense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000466.2 -1 reviewed p.R1275* 1.000 191 0.5% 236 39.8% 9 77.7% - - - NULL PEX1 5189 genome.wustl.edu 37 7 92147524 92147524 + Nonsense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000466.2 -1 reviewed p.R135* 1.000 89 0% 127 48.8% 2 100% - - - superfamily_ADC-like,HMMPfam_PEX-1N SAMD9 54809 genome.wustl.edu 37 7 92731410 92731410 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_017654.2 -1 validated p.R1334I 0.000 62 0% 133 41.4% 0 - possibly_damaging(0.677) deleterious(0.02) deleterious(0.624) NULL PEG10 23089 genome.wustl.edu 37 7 94293228 94293228 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001040152.1 +1 reviewed p.F120 1.000 30 0% 31 35.5% 0 - - - - HMMPfam_Retrotrans_gag PON1 5444 genome.wustl.edu 37 7 94928407 94928407 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000446.5 -1 reviewed p.R306Q 0.462 16 0% 51 43.1% 0 - possibly_damaging(0.716) tolerated(0.1) deleterious(0.545) superfamily_Calcium-dependent phosphotriesterase ZNF3 7551 genome.wustl.edu 37 7 99668944 99668944 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_032924.3 -1 validated p.R388I 1.000 81 0% 192 36.5% 30 53.3% probably_damaging(0.971) deleterious(0) deleterious(0.857) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 GAL3ST4 79690 genome.wustl.edu 37 7 99758505 99758505 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024637.4 -1 reviewed p.F169L 1.000 35 0% 30 33.3% 2 0% probably_damaging(0.996) deleterious(0.01) deleterious(0.867) HMMPfam_Gal-3-0_sulfotr FBXO24 26261 genome.wustl.edu 37 7 100189426 100189426 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_033506.2 +1 reviewed p.G153 0.996 17 0% 69 39.1% 2 50% - - - NULL MUC12 10071 genome.wustl.edu 37 7 100635842 100635842 + Missense_Mutation SNP C C G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000379442 +1 known p.S809R 0.002 105 0% 310 39.7% 0 - possibly_damaging(0.539) - - NULL FAM185A 222234 genome.wustl.edu 37 7 102389710 102389710 + Missense_Mutation SNP A A T rs147397718 by1000genomes TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001145268.1 +1 validated p.Q19L 0.000 9 0.000 14 0.500 10 50% possibly_damaging(0.741) - - NULL LRRC17 10234 genome.wustl.edu 37 7 102579989 102579989 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001031692.2 +1 validated p.K295N 1.000 62 0% 130 48.5% 10 70% possibly_damaging(0.471) deleterious(0.01) deleterious(0.561) HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_RNI-like KCND2 3751 genome.wustl.edu 37 7 119915653 119915653 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_012281.2 +1 reviewed p.E323* 1.000 50 0% 84 42.9% 0 - - - - HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels C7orf58 79974 genome.wustl.edu 37 7 120911368 120911368 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024913.4 +1 validated p.L918V 0.000 70 0% 81 48.1% 0 - benign(0.001) tolerated(0.47) neutral(0.011) NULL PTPRZ1 5803 genome.wustl.edu 37 7 121653490 121653490 + Missense_Mutation SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002851.2 +1 reviewed p.N1464D 0.001 46 0% 66 31.8% 0 - benign(0.001) deleterious(0.03) neutral(0.364) NULL ASB15 142685 genome.wustl.edu 37 7 123256274 123256274 + Splice_Site SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_080928.3 +1 validated e2-1 0.998 88 1.1% 174 28.2% 0 - - - - - SND1 27044 genome.wustl.edu 37 7 127347644 127347644 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014390.2 +1 validated p.R327S 1.000 23 0% 86 33.7% 121 47.9% benign(0.054) deleterious(0.01) neutral(0.409) HMMPfam_SNase,HMMSmart_SNc,superfamily_Staphylococal_nuclease_OB-fold AGBL3 340351 genome.wustl.edu 37 7 134717605 134717605 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000455283 +1 known p.A144T 0.860 50 0% 192 34.4% 0 - - - - NULL AGBL3 340351 genome.wustl.edu 37 7 134730587 134730587 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_178563.3 +1 provisional p.R589I 0.912 59 0% 84 40.5% 0 - possibly_damaging(0.893) tolerated(0.13) deleterious(0.605) NULL AGK 55750 genome.wustl.edu 37 7 141255292 141255292 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018238.3 +1 validated p.R9Q 1.000 28 0% 84 38.1% 2 50% probably_damaging(0.963) deleterious(0) deleterious(0.850) NULL TRBV3-1 28619 genome.wustl.edu 37 7 142008441 142008441 + Silent SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000390387 +1 known p.V10 0.197 28 0% 86 37.2% 0 - - - - NULL TRBV5-5 28610 genome.wustl.edu 37 7 142149061 142149061 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000390372 -1 known p.E70 0.000 57 0% 196 33.7% 0 - - - - HMMPfam_V-set,superfamily_Immunoglobulin TRBV10-2 28584 genome.wustl.edu 37 7 142206654 142206654 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000426318 -1 known p.Y67* 0.229 19 0% 86 32.6% 0 - - - - HMMPfam_V-set,superfamily_SSF48726 TRPV5 56302 genome.wustl.edu 37 7 142611856 142611856 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_019841.4 -1 reviewed p.M491I 1.000 40 0% 80 35% 0 - benign(0.017) tolerated(0.17) neutral(0.059) HMMPfam_Ion_trans KEL 3792 genome.wustl.edu 37 7 142658106 142658106 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000420.2 -1 reviewed p.F103L 1.000 56 0% 145 37.2% 0 - probably_damaging(0.998) deleterious(0) deleterious(0.919) "HMMPfam_Peptidase_M13_N,superfamily_Metalloproteases (""zincins"") catalytic domain" CTAGE6P 340307 genome.wustl.edu 37 7 143454270 143454270 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_178561.4 -1 validated p.S161Y 0.150 213 0% 411 9.2% 0 - - - - NULL NOBOX 135935 genome.wustl.edu 37 7 144097386 144097386 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001080413.2 -1 provisional p.E288D 0.904 35 0% 122 43.4% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like EZH2 2146 genome.wustl.edu 37 7 148524263 148524263 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004456.3 -1 reviewed p.K241Q 1.000 71 0% 191 39.3% 2 50% probably_damaging(0.987) tolerated(0.06) deleterious(0.759) HMMSmart_SANT LOC100288724 100288724 genome.wustl.edu 37 7 150311343 150311343 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XM_002342806.1 -1 model p.C173W 1.000 30 0% 55 30.9% 0 - - - - NULL TMEM176A 55365 genome.wustl.edu 37 7 150500787 150500787 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018487.2 +1 validated p.R141Q 0.000 23 0% 57 38.6% 39 12.8% possibly_damaging(0.515) tolerated(0.59) neutral(0.178) HMMPfam_LR8 SMARCD3 6604 genome.wustl.edu 37 7 150945617 150945617 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001003801.1 -1 reviewed p.R11H 1.000 7 0.000 49 0.449 0 - probably_damaging(0.984) deleterious(0) deleterious(0.875) NULL DPP6 1804 genome.wustl.edu 37 7 154237627 154237627 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000377770 +1 known p.F156L 1.000 74 0% 111 38.7% 0 - benign(0.001) tolerated(0.8) neutral(0.001) superfamily_Dipeptidyl peptidase IV/CD26 N-terminal domain PAXIP1 22976 genome.wustl.edu 37 7 154790426 154790426 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_007349.3 -1 reviewed p.I50 0.992 42 0% 99 38.4% 1 0% - - - HMMPfam_BRCT,superfamily_BRCT domain RNF32 140545 genome.wustl.edu 37 7 156450917 156450917 + Silent SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_030936.2 +1 reviewed p.A182 0.024 54 0% 111 39.6% 3 0% - - - NULL DLGAP2 9228 genome.wustl.edu 37 8 1497519 1497519 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004745.3 +1 reviewed p.D220 0.989 12 0% 11 72.7% 0 - - - - NULL CSMD1 64478 genome.wustl.edu 37 8 2808763 2808763 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_033225.5 -1 validated p.W3359C 1.000 27 0% 73 31.5% 0 - probably_damaging(1) tolerated(0.06) deleterious(0.823) NULL CSMD1 64478 genome.wustl.edu 37 8 3165982 3165982 + Silent SNP G G A rs146926975 by1000genomes TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_033225.5 -1 validated p.Y1226 0.998 23 0% 92 40.2% 0 - - - - HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain DEFB104A 140596 genome.wustl.edu 37 8 7698671 7698671 + Silent SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_080389.2 +1 reviewed p.C58 0.555 180 0% 695 16.5% 0 - - - - NULL EFHA2 286097 genome.wustl.edu 37 8 16921653 16921653 + Nonsense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_181723.2 +1 validated p.R148* 0.934 44 0% 186 40.9% 0 - - - - NULL MTUS1 57509 genome.wustl.edu 37 8 17611329 17611329 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001001924.2 -1 reviewed p.S663N 0.996 153 0% 365 38.9% 3 33.3% probably_damaging(0.998) deleterious(0.04) deleterious(0.823) NULL PSD3 23362 genome.wustl.edu 37 8 18658818 18658818 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015310.3 -1 validated p.R662I 1.000 93 0% 135 40% 3 33.3% probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMPfam_Sec7,HMMSmart_Sec7,superfamily_Sec7 CSGALNACT1 55790 genome.wustl.edu 37 8 19276238 19276238 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001130518.1 -1 validated p.L386I 1.000 53 0% 105 34.3% 2 0% probably_damaging(0.998) tolerated(0.22) deleterious(0.516) HMMPfam_CHGN,superfamily_SSF53448 TNFRSF10B 8795 genome.wustl.edu 37 8 22879978 22879978 + RNA SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NR_027140.1 -1 reviewed NULL 0.000 7 0.000 6 0.667 22 45.4% - - - - FBXO16 157574 genome.wustl.edu 37 8 28286250 28286250 + Silent SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_172366.2 -1 reviewed p.C291 0.872 78 1.3% 127 37.8% 26 46.1% possibly_damaging(0.801) deleterious(0.03) deleterious(0.666) NULL TEX15 56154 genome.wustl.edu 37 8 30701305 30701305 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_031271.3 -1 validated p.F1743L 1.000 66 0% 130 31.5% 0 - benign(0.296) tolerated(0.17) neutral(0.150) NULL TEX15 56154 genome.wustl.edu 37 8 30704068 30704068 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_031271.3 -1 validated p.I822M 0.000 69 0% 85 50.6% 0 - benign(0.057) tolerated(0.93) neutral(0.004) NULL PURG 29942 genome.wustl.edu 37 8 30889403 30889403 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_013357.2 -1 reviewed p.T299N 1.000 66 0% 169 33.1% 0 - benign(0.023) deleterious(0.01) neutral(0.407) HMMPfam_PurA,HMMSmart_SM00712 AGPAT6 137964 genome.wustl.edu 37 8 41469477 41469477 + Nonsense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_178819.3 +1 validated p.R223* 1.000 44 0% 135 37% 34 14.7% - - - NULL KAT6A 7994 genome.wustl.edu 37 8 41791030 41791030 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001099412.1 -1 validated p.D1570N 1.000 31 0% 69 53.6% 6 33.3% probably_damaging(1) deleterious(0) deleterious(0.945) NULL AP3M2 10947 genome.wustl.edu 37 8 42026560 42026560 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001134296.1 +1 reviewed p.K413T 1.000 78 0% 171 39.8% 4 75% possibly_damaging(0.594) tolerated(0.05) deleterious(0.550) HMMPfam_Adap_comp_sub,superfamily_Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor ENSG00000215179 0 genome.wustl.edu 37 8 47885758 47885758 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000399732 -1 known p.D159Y 1.000 37 0% 83 42.2% 0 - - - - HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase PRKDC 5591 genome.wustl.edu 37 8 48740754 48740754 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000314191 -1 known p.F2850C 1.000 130 0% 262 43.9% 4 50% probably_damaging(1) deleterious(0.04) deleterious(0.849) superfamily_ARM repeat UBXN2B 137886 genome.wustl.edu 37 8 59347023 59347023 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001077619.1 +1 validated p.E165* 1.000 77 0% 158 38% 3 0% - - - HMMPfam_SEP,HMMSmart_SEP,superfamily_SEP MYBL1 4603 genome.wustl.edu 37 8 67513988 67513988 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001080416.2 -1 validated p.K48T 1.000 99 0% 179 34.6% 0 - benign(0.047) deleterious(0) neutral(0.448) HMMSmart_SANT,superfamily_Homeodomain_like,HMMPfam_Myb_DNA-binding CPA6 57094 genome.wustl.edu 37 8 68340315 68340315 + Nonsense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020361.4 -1 validated p.R365* 0.000 28 0% 119 33.6% 1 0% - - - HMMPfam_Peptidase_M14,HMMSmart_SM00631,superfamily_Zn-dependent exopeptidases LOC392232 392232 genome.wustl.edu 37 8 73126438 73126438 + RNA SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XR_037363.2 -1 model NULL 0.455 34 0% 41 43.9% 0 - - - - - LY96 23643 genome.wustl.edu 37 8 74939065 74939065 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015364.3 +1 validated p.K125Q 0.000 254 0% 293 39.6% 3 0% benign(0.173) tolerated(0.32) neutral(0.040) HMMPfam_E1_DerP2_DerF2,HMMSmart_SM00737 ZFHX4 79776 genome.wustl.edu 37 8 77763816 77763816 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024721.4 +1 validated p.K1508N 1.000 33 0% 34 17.6% 0 - benign(0.189) - - HMMSmart_SM00451,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers ZFHX4 79776 genome.wustl.edu 37 8 77765615 77765615 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024721.4 +1 validated p.S2108Y 1.000 45 0% 90 46.7% 0 - probably_damaging(0.959) - - HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like ZFHX4 79776 genome.wustl.edu 37 8 77767078 77767078 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024721.4 +1 validated p.E2596K 1.000 39 0% 28 42.9% 0 - possibly_damaging(0.702) - - HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like,PatternScan_HOMEOBOX_1 SLC10A5 347051 genome.wustl.edu 37 8 82606447 82606447 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001010893.2 -1 validated p.S254Y 0.999 39 0% 65 40% 0 - probably_damaging(0.999) deleterious(0.03) deleterious(0.855) HMMPfam_SBF PSKH2 85481 genome.wustl.edu 37 8 87076851 87076851 + Silent SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_033126.1 -1 provisional p.I65 1.000 19 0% 39 46.2% 0 - - - - HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase DCAF4L2 138009 genome.wustl.edu 37 8 88885469 88885469 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152418.3 -1 validated p.R244H 0.985 42 0% 143 43.4% 0 - probably_damaging(1) deleterious(0.01) deleterious(0.905) superfamily_WD40_like VPS13B 157680 genome.wustl.edu 37 8 100128027 100128027 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_017890.3 +1 reviewed p.E288* 1.000 81 0% 129 39.5% 0 - - - - NULL FBXO43 286151 genome.wustl.edu 37 8 101153197 101153197 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001029860.2 -1 validated p.D429Y 0.001 62 0% 160 38.8% 1 0% possibly_damaging(0.624) tolerated(0.1) deleterious(0.504) NULL PABPC1 26986 genome.wustl.edu 37 8 101727818 101727818 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002568.3 -1 validated p.R172Q 1.000 51 0% 173 33.5% 238 40.7% benign(0.003) tolerated(0.32) neutral(0.024) superfamily_RNA-binding domain RBD KLF10 7071 genome.wustl.edu 37 8 103664009 103664009 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005655.2 -1 validated p.S184Y 0.001 38 0% 111 38.7% 36 47.2% benign(0.313) tolerated(0.1) neutral(0.384) NULL BAALC 79870 genome.wustl.edu 37 8 104240298 104240298 + Nonsense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024812.2 +1 reviewed p.R137* 0.985 37 0% 120 41.7% 2 100% - - - NULL FZD6 8323 genome.wustl.edu 37 8 104340629 104340629 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003506.3 +1 reviewed p.R509Q 1.000 72 0% 197 41.6% 27 25.9% probably_damaging(1) deleterious(0.02) deleterious(0.883) HMMPfam_Frizzled RIMS2 9699 genome.wustl.edu 37 8 104897942 104897942 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001100117.1 +1 validated p.S372Y 1.000 41 0% 28 50% 0 - probably_damaging(0.999) deleterious(0.01) deleterious(0.896) NULL RIMS2 9699 genome.wustl.edu 37 8 104898011 104898011 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001100117.1 +1 validated p.R395I 1.000 33 0% 23 39.1% 0 - possibly_damaging(0.632) tolerated(0.41) neutral(0.236) NULL ABRA 137735 genome.wustl.edu 37 8 107782101 107782101 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_139166.4 -1 validated p.K106N 1.000 109 0% 188 38.8% 0 - benign(0.014) tolerated(0.23) neutral(0.042) NULL PKHD1L1 93035 genome.wustl.edu 37 8 110534511 110534511 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_177531.4 +1 validated p.S4043L 1.000 37 0% 50 40% 22 22.7% benign(0.003) tolerated(0.27) neutral(0.034) NULL SLC30A8 169026 genome.wustl.edu 37 8 118170071 118170071 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_173851.2 +1 reviewed p.A187V 0.946 71 0% 189 38.6% 0 - benign(0) tolerated(0.76) neutral(0.001) HMMPfam_Cation_efflux HAS2 3037 genome.wustl.edu 37 8 122641314 122641314 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005328.2 -1 reviewed p.I89 0.974 87 1.1% 382 36.6% 0 - - - - HMMPfam_Glycos_transf_2,superfamily_SSF53448 RNF139 11236 genome.wustl.edu 37 8 125498947 125498947 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_007218.3 +1 reviewed p.S353R 1.000 45 0% 184 40.8% 28 32.1% possibly_damaging(0.749) tolerated(0.08) deleterious(0.575) NULL ZNF572 137209 genome.wustl.edu 37 8 125989168 125989168 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152412.2 +1 validated p.E220K 0.791 49 0% 47 31.9% 3 66.6% possibly_damaging(0.862) tolerated(0.1) deleterious(0.619) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 ZNF572 137209 genome.wustl.edu 37 8 125989653 125989653 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152412.2 +1 validated p.E381D 0.999 103 0% 128 32.8% 2 0% possibly_damaging(0.827) deleterious(0.01) deleterious(0.720) superfamily_SSF57667 TG 7038 genome.wustl.edu 37 8 134145835 134145835 + Nonsense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003235.4 +1 reviewed p.R2707* 0.010 56 0% 179 40.8% 0 - - - - HMMPfam_COesterase,superfamily_alpha/beta-Hydrolases FAM135B 51059 genome.wustl.edu 37 8 139160913 139160913 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015912.3 -1 validated p.E1100* 1.000 61 0% 116 39.7% 0 - - - - NULL FAM135B 51059 genome.wustl.edu 37 8 139164409 139164409 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015912.3 -1 validated p.S770F 1.000 19 0% 28 25% 0 - probably_damaging(0.998) deleterious(0) deleterious(0.919) NULL ZNF623 9831 genome.wustl.edu 37 8 144733142 144733142 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014789.3 +1 validated p.R367I 0.201 61 0% 129 40.3% 3 33.3% probably_damaging(1) deleterious(0.02) deleterious(0.883) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers EPPK1 83481 genome.wustl.edu 37 8 144944489 144944489 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_031308.1 -1 validated p.S978N 0.007 4 0.000 6 0.833 2 100% benign(0.021) tolerated(0.22) neutral(0.043) HMMPfam_Plectin,HMMSmart_SM00250,superfamily_Plakin repeat ZNF252 286101 genome.wustl.edu 37 8 146202106 146202106 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000355436 -1 known p.R581I 0.317 51 0% 66 31.8% 9 33.3% possibly_damaging(0.95) deleterious(0) deleterious(0.838) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 ZNF252 286101 genome.wustl.edu 37 8 146202610 146202610 + Missense_Mutation SNP C C A rs143500651 by1000genomes TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000355436 -1 known p.R434I 0.999 53 0% 48 41.7% 3 33.3% benign(0.002) deleterious(0) neutral(0.445) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 RFX3 5991 genome.wustl.edu 37 9 3225258 3225258 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_134428.1 -1 reviewed p.S678R 1.000 49 0% 116 46.6% 18 27.7% probably_damaging(0.956) deleterious(0.02) deleterious(0.782) NULL RCL1 10171 genome.wustl.edu 37 9 4834227 4834227 + Silent SNP C C G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005772.3 +1 validated p.L182 1.000 35 0% 100 45% 21 57.1% - - - HMMPfam_RTC,superfamily_RNA3apos_cycl/enolpyr_transf_A/B KIAA1432 57589 genome.wustl.edu 37 9 5753648 5753648 + Splice_Site SNP T T A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020829.2 +1 validated e13+2 1.000 62 0% 203 45.8% 0 - - - - - GLDC 2731 genome.wustl.edu 37 9 6592193 6592193 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000170.2 -1 reviewed p.E478* 1.000 64 0% 111 34.2% 0 - - - - superfamily_PyrdxlP-dep_Trfase_major,HMMPfam_GDC-P FREM1 158326 genome.wustl.edu 37 9 14746978 14746978 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_144966.5 -1 reviewed p.I2027 0.093 23 0% 71 47.9% 11 36.3% - - - NULL C9orf93 203238 genome.wustl.edu 37 9 15594150 15594150 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_173550.2 +1 predicted p.E219* 1.000 231 0% 169 37.3% 0 - - - - NULL CNTLN 54875 genome.wustl.edu 37 9 17342366 17342366 + Nonsense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_017738.2 +1 validated p.R604* 0.946 61 0% 81 44.4% 0 - - - - NULL CNTLN 54875 genome.wustl.edu 37 9 17416079 17416079 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_017738.2 +1 validated p.K1002N 0.994 58 0% 64 43.8% 0 - possibly_damaging(0.889) deleterious(0.05) deleterious(0.695) NULL RRAGA 10670 genome.wustl.edu 37 9 19050248 19050248 + Silent SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006570.4 +1 validated p.I197 0.997 32 0% 100 31% 82 4.8% - - - HMMPfam_Gtr1_RagA,superfamily_P-loop containing nucleoside triphosphate hydrolases IFNA6 3443 genome.wustl.edu 37 9 21350375 21350375 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_021002.2 -1 validated p.I171S 0.174 80 0% 258 43.8% 0 - probably_damaging(0.995) deleterious(0) deleterious(0.902) HMMPfam_Interferon,HMMSmart_SM00076,superfamily_4-helical cytokines LOC402360 402360 genome.wustl.edu 37 9 23682022 23682022 + Missense_Mutation SNP T T A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XM_002342894.1 +1 model p.I43N 0.800 11 0% 24 29.2% 0 - - - - HMMPfam_Nop,superfamily_Nop domain IFT74 80173 genome.wustl.edu 37 9 26962017 26962017 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001099222.1 +1 validated p.V18I 1.000 23 0% 95 30.5% 5 100% benign(0.001) tolerated(0.62) neutral(0.004) NULL TEK 7010 genome.wustl.edu 37 9 27209157 27209157 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000459.3 +1 reviewed p.E872* 1.000 36 0% 105 49.5% 0 - - - - HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like LOC100288436 100288436 genome.wustl.edu 37 9 30559018 30559018 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XM_002342887.1 -1 model p.K140N 0.688 139 0.7% 304 33.2% 2 0% - - - NULL TRBV25OR9-2 6960 genome.wustl.edu 37 9 33662490 33662490 + Missense_Mutation SNP T T A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000438417 +1 known p.S56T 0.682 18 0% 75 42.7% 0 - benign(0.003) deleterious(0.01) neutral(0.406) superfamily_Immunoglobulin ARID3C 138715 genome.wustl.edu 37 9 34622088 34622088 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001017363.1 -1 reviewed p.P356H 1.000 25 0% 93 36.6% 0 - possibly_damaging(0.945) deleterious(0.01) deleterious(0.795) NULL LOC730110 730110 genome.wustl.edu 37 9 35149143 35149143 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XM_002342891.1 -1 model p.F13L 0.159 94 0% 402 42.3% 0 - - - - HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352) UNC13B 10497 genome.wustl.edu 37 9 35310774 35310774 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006377.3 +1 reviewed p.E358K 1.000 49 0% 71 39.4% 0 - benign(0) tolerated(0.16) neutral(0.059) NULL TPM2 7169 genome.wustl.edu 37 9 35685536 35685536 + Silent SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003289.3 -1 reviewed p.V129 1.000 36 0% 98 33.7% 30 16.6% - - - HMMPfam_Tropomyosin ZCCHC7 84186 genome.wustl.edu 37 9 37126366 37126366 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_032226.2 +1 validated p.E13K 1.000 75 0% 283 39.2% 0 - probably_damaging(0.99) deleterious(0) deleterious(0.886) NULL ZNF658 26149 genome.wustl.edu 37 9 40772822 40772822 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_033160.5 -1 validated p.R818I 1.000 110 0% 274 37.6% 0 - probably_damaging(0.975) tolerated(0.23) neutral(0.458) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers ZNF658 26149 genome.wustl.edu 37 9 40774536 40774536 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_033160.5 -1 validated p.E247* 0.704 104 0% 229 44.1% 0 - - - - superfamily_C2H2 and C2HC zinc fingers FAM75A6 389730 genome.wustl.edu 37 9 43624988 43624988 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001145196.1 -1 predicted p.Q1233H 0.001 24 0% 76 52.6% 0 - possibly_damaging(0.66) tolerated(0.14) deleterious(0.483) NULL MAMDC2 256691 genome.wustl.edu 37 9 72758652 72758652 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_153267.4 +1 validated p.E441* 1.000 29 0% 95 45.3% 0 - - - - HMMPfam_MAM,HMMSmart_SM00137 TRPM3 80036 genome.wustl.edu 37 9 73296482 73296482 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001007471.2 -1 reviewed p.R429W 1.000 70 0% 170 42.9% 0 - probably_damaging(0.997) deleterious(0) deleterious(0.911) NULL TMC1 117531 genome.wustl.edu 37 9 75387397 75387397 + Missense_Mutation SNP T T A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_138691.2 +1 reviewed p.N270K 1.000 52 0% 252 37.7% 0 - benign(0) tolerated(0.9) - NULL TRPM6 140803 genome.wustl.edu 37 9 77376943 77376943 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_017662.4 -1 reviewed p.E1548D 0.985 124 0% 176 51.1% 0 - unknown(0) tolerated(0.16) - NULL PCSK5 5125 genome.wustl.edu 37 9 78799597 78799597 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006200.3 +1 reviewed p.L736I 0.999 25 0% 82 40.2% 0 - benign(0.016) tolerated(0.68) neutral(0.003) HMMSmart_SM00261,superfamily_Growth factor receptor domain FAM75D1 389763 genome.wustl.edu 37 9 84608774 84608774 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001001670.2 +1 validated p.R1130I 0.000 23 0% 38 52.6% 0 - benign(0.014) deleterious(0.05) neutral(0.346) NULL FRMD3 257019 genome.wustl.edu 37 9 85950475 85950475 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_174938.4 -1 validated p.Q184H 1.000 140 0% 331 44.4% 0 - benign(0) deleterious(0.02) neutral(0.383) HMMPfam_FERM_M,superfamily_Second domain of FERM,HMMSmart_SM00295 ECM2 1842 genome.wustl.edu 37 9 95277345 95277345 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001393.2 -1 reviewed p.K208Q 0.519 63 0% 176 39.2% 0 - possibly_damaging(0.586) tolerated(0.2) neutral(0.251) NULL BICD2 23299 genome.wustl.edu 37 9 95480987 95480987 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001003800.1 -1 reviewed p.R647H 1.000 17 0% 51 35.3% 3 33.3% probably_damaging(1) tolerated(0.49) deleterious(0.510) HMMPfam_BicD NCBP1 4686 genome.wustl.edu 37 9 100405601 100405601 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002486.4 +1 reviewed p.E114* 1.000 81 0% 205 40.5% 2 0% - - - HMMPfam_MIF4G,HMMSmart_MIF4G,superfamily_ARM-type_fold BAAT 570 genome.wustl.edu 37 9 104124930 104124930 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001127610.1 -1 reviewed p.R346I 0.001 46 0% 114 43.9% 0 - probably_damaging(0.968) tolerated(0.06) deleterious(0.732) HMMPfam_BAAT_C,superfamily_SSF53474 BAAT 570 genome.wustl.edu 37 9 104133419 104133419 + Silent SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001127610.1 -1 reviewed p.R90 0.746 49 0% 97 30.9% 0 - - - - HMMPfam_Bile_Hydr_Trans ZNF189 7743 genome.wustl.edu 37 9 104170946 104170946 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003452.2 +1 validated p.R299Q 1.000 73 0% 97 38.1% 3 0% possibly_damaging(0.587) tolerated(0.36) neutral(0.223) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers ZNF189 7743 genome.wustl.edu 37 9 104171309 104171309 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003452.2 +1 validated p.R420I 1.000 68 0% 67 47.8% 9 77.7% benign(0.198) tolerated(0.11) neutral(0.291) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers ZNF189 7743 genome.wustl.edu 37 9 104171729 104171729 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003452.2 +1 validated p.R560I 1.000 75 0% 78 38.5% 8 25% probably_damaging(0.983) tolerated(0.07) deleterious(0.748) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers GRIN3A 116443 genome.wustl.edu 37 9 104341524 104341524 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_133445.2 -1 reviewed p.R962Q 1.000 50 0% 182 47.3% 0 - probably_damaging(0.997) tolerated(0.07) deleterious(0.785) NULL CYLC2 1539 genome.wustl.edu 37 9 105757676 105757676 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001340.3 +1 reviewed p.R5I 1.000 50 0% 122 38.5% 0 - probably_damaging(0.998) deleterious(0) deleterious(0.919) NULL TMEM38B 55151 genome.wustl.edu 37 9 108536349 108536349 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018112.1 +1 provisional p.K288N 1.000 42 0% 47 51.1% 1 0% benign(0.104) deleterious(0) neutral(0.453) NULL IKBKAP 8518 genome.wustl.edu 37 9 111663705 111663705 + Missense_Mutation SNP T T A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003640.3 -1 reviewed p.T672S 0.999 61 0% 113 32.7% 8 12.5% benign(0.025) tolerated(1) neutral(0.001) HMMPfam_IKI3 SVEP1 79987 genome.wustl.edu 37 9 113170290 113170290 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_153366.3 -1 validated p.L2530 0.000 12 0% 40 45% 3 0% - - - HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain ZNF483 158399 genome.wustl.edu 37 9 114304843 114304843 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_133464.2 +1 validated p.R543Q 0.663 110 0% 120 40.8% 0 - probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 WDR31 114987 genome.wustl.edu 37 9 116079127 116079127 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001012361.1 -1 reviewed p.A336T 0.005 39 0% 73 43.8% 6 66.6% benign(0) tolerated(0.67) neutral(0.003) HMMSmart_SM00320,superfamily_WD40 repeat-like PSMD5 5711 genome.wustl.edu 37 9 123586959 123586959 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005047.2 -1 reviewed p.F273 1.000 42 0% 86 33.7% 4 0% - - - superfamily_ARM-type_fold,HMMPfam_Proteasom_PSMB C5 727 genome.wustl.edu 37 9 123777519 123777519 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001735.2 -1 reviewed p.L673I 0.998 232 0% 588 43% 0 - benign(0) tolerated(0.5) neutral(0.010) NULL OR1N2 138882 genome.wustl.edu 37 9 125316432 125316432 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001004457.1 +1 provisional p.F328L 0.000 73 0% 162 42.6% 0 - benign(0) tolerated(0.13) neutral(0.253) NULL ZBTB6 10773 genome.wustl.edu 37 9 125673960 125673960 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006626.4 -1 provisional p.L131R 0.994 23 0% 62 35.5% 1 0% benign(0.031) deleterious(0.04) neutral(0.350) NULL RALGPS1 9649 genome.wustl.edu 37 9 129815212 129815212 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014636.1 +1 provisional p.T159 0.996 93 0% 264 37.1% 1 0% - - - HMMPfam_RasGEF,HMMSmart_SM00147,superfamily_Ras GEF CIZ1 25792 genome.wustl.edu 37 9 130943043 130943043 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001131016.1 -1 validated p.E213D 1.000 22 0% 55 38.2% 8 62.5% probably_damaging(0.987) deleterious(0.04) deleterious(0.785) NULL DNM1 1759 genome.wustl.edu 37 9 131008675 131008675 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004408.2 +1 reviewed p.E558D 1.000 27 0% 95 34.7% 1 100% benign(0.31) deleterious(0.03) neutral(0.461) HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like COQ4 51117 genome.wustl.edu 37 9 131095196 131095196 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_016035.3 +1 validated p.F200L 0.962 41 0% 214 31.3% 239 58.9% benign(0) tolerated(1) - HMMPfam_Coq4 SPTAN1 6709 genome.wustl.edu 37 9 131367411 131367411 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001130438.1 +1 validated p.R1273H 1.000 27 0% 49 38.8% 17 76.4% probably_damaging(1) tolerated(0.06) deleterious(0.823) HMMPfam_Spectrin,HMMSmart_SPEC,superfamily_Spectrin PRDM12 59335 genome.wustl.edu 37 9 133543632 133543632 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_021619.2 +1 validated p.R168C 0.993 39 0% 96 30.2% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_SM00317,superfamily_SET domain EXOSC2 23404 genome.wustl.edu 37 9 133579087 133579087 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014285.5 +1 validated p.D270N 1.000 114 0% 244 43% 17 52.9% benign(0.358) tolerated(0.13) neutral(0.366) NULL SETX 23064 genome.wustl.edu 37 9 135171322 135171322 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015046.5 -1 reviewed p.E2015* 1.000 222 0% 366 46.2% 0 - - - - superfamily_P-loop containing nucleoside triphosphate hydrolases SETX 23064 genome.wustl.edu 37 9 135173471 135173471 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015046.5 -1 reviewed p.R1926I 1.000 52 0% 164 38.4% 0 - probably_damaging(0.998) deleterious(0.03) deleterious(0.839) superfamily_P-loop containing nucleoside triphosphate hydrolases SETX 23064 genome.wustl.edu 37 9 135202086 135202086 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015046.5 -1 reviewed p.S1633 0.000 65 0% 179 34.1% 0 - - - - NULL DDX31 64794 genome.wustl.edu 37 9 135493757 135493757 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_022779.7 -1 reviewed p.Y700 0.995 17 0% 65 38.5% 6 33.3% - - - NULL C9orf96 169436 genome.wustl.edu 37 9 136263173 136263173 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_153710.3 +1 validated p.D358Y 0.001 14 0% 85 29.4% 0 - possibly_damaging(0.924) deleterious(0.03) deleterious(0.738) superfamily_ARM repeat FCN1 2219 genome.wustl.edu 37 9 137801885 137801885 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002003.3 -1 reviewed p.S247Y 0.975 34 0% 122 30.3% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Fibrinogen_C,HMMSmart_SM00186,superfamily_Fibrinogen C-terminal domain-like TUBB8 347688 genome.wustl.edu 37 10 93287 93287 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_177987.2 -1 validated p.V349I 1.000 28 0% 91 30.8% 1 100% benign(0.002) deleterious(0.03) neutral(0.364) superfamily_Tub_FtsZ_C,HMMPfam_Tubulin_C PRKCQ 5588 genome.wustl.edu 37 10 6483862 6483862 + Missense_Mutation SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006257.2 -1 reviewed p.L610P 0.760 21 0% 36 27.8% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase ITIH5 80760 genome.wustl.edu 37 10 7615128 7615128 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_030569.5 -1 validated p.R670I 1.000 91 0% 374 38.2% 7 28.5% benign(0.016) tolerated(0.28) neutral(0.032) NULL ECHDC3 79746 genome.wustl.edu 37 10 11791501 11791501 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024693.4 +1 validated p.G100 0.854 30 0% 120 37.5% 9 22.2% - - - HMMPfam_ECH,superfamily_ClpP/crotonase DCLRE1C 64421 genome.wustl.edu 37 10 14970096 14970096 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001033855.1 -1 reviewed p.R279I 0.993 81 0% 253 36.4% 3 33.3% possibly_damaging(0.91) tolerated(0.14) deleterious(0.612) HMMPfam_DRMBL FAM171A1 221061 genome.wustl.edu 37 10 15326034 15326034 + Silent SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001010924.1 -1 validated p.I56 0.997 19 0% 39 41% 5 60% - - - HMMPfam_UPF0560 CUBN 8029 genome.wustl.edu 37 10 17110271 17110271 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001081.3 -1 reviewed p.E934* 0.002 51 0% 104 35.6% 0 - - - - HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain PTPLA 9200 genome.wustl.edu 37 10 17636234 17636234 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014241.3 -1 reviewed p.L252I 1.000 64 0% 114 48.2% 2 50% probably_damaging(0.987) tolerated(0.1) deleterious(0.723) HMMPfam_PTPLA MRC1 4360 genome.wustl.edu 37 10 17887414 17887414 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001009567.1 +1 reviewed p.N348H 0.524 110 0% 226 42.9% 0 - possibly_damaging(0.876) tolerated(0.06) deleterious(0.663) NULL MYO3A 53904 genome.wustl.edu 37 10 26315346 26315346 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_017433.4 +1 reviewed p.E280* 1.000 47 0% 136 38.2% 0 - - - - HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase GAD2 2572 genome.wustl.edu 37 10 26581403 26581403 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000818.2 +1 reviewed p.G466W 1.000 48 0% 121 42.1% 0 - probably_damaging(1) deleterious(0.03) deleterious(0.865) HMMPfam_Pyridoxal_deC,superfamily_PLP-dependent transferases SVIL 6840 genome.wustl.edu 37 10 29812410 29812410 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_021738.2 -1 reviewed p.N1045H 0.018 78 0% 236 41.1% 2 0% benign(0.296) deleterious(0.04) neutral(0.441) NULL MTPAP 55149 genome.wustl.edu 37 10 30611527 30611527 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018109.3 -1 validated p.E338K 1.000 41 0% 80 37.5% 8 50% benign(0.399) deleterious(0.01) deleterious(0.534) superfamily_Nucleotidyltransferase ANKRD30A 91074 genome.wustl.edu 37 10 37454070 37454070 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_052997.2 +1 validated p.S628Y 0.000 179 0% 317 76.7% 0 - possibly_damaging(0.449) deleterious(0) deleterious(0.592) NULL ANKRD30A 91074 genome.wustl.edu 37 10 37478455 37478455 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_052997.2 +1 validated p.E772* 0.002 296 0% 288 20.5% 0 - - - - NULL ANKRD30A 91074 genome.wustl.edu 37 10 37478465 37478465 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_052997.2 +1 validated p.K775T 0.000 289 0% 293 19.8% 0 - benign(0.224) tolerated(0.48) neutral(0.033) NULL ZNF485 220992 genome.wustl.edu 37 10 44112108 44112108 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_145312.3 +1 validated p.R206I 1.000 75 0% 98 40.8% 1 0% benign(0.179) tolerated(0.06) neutral(0.339) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 ALOX5 240 genome.wustl.edu 37 10 45878126 45878126 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000698.2 +1 reviewed p.R116C 0.001 16 0% 21 47.6% 1 0% benign(0.004) deleterious(0.03) neutral(0.364) superfamily_Lipoxygenase ALOX5 240 genome.wustl.edu 37 10 45924111 45924111 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000698.2 +1 reviewed p.D294N 0.996 26 0% 82 43.9% 1 0% benign(0.008) tolerated(0.15) neutral(0.241) HMMPfam_Lipoxygenase,superfamily_Lipoxygenase FRMPD2 143162 genome.wustl.edu 37 10 49365380 49365380 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001018071.3 -1 reviewed p.S1305 0.000 139 0% 300 26% 3 0% - - - NULL WDFY4 57705 genome.wustl.edu 37 10 50167780 50167780 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000312002 +1 known p.R1806W 0.991 19 0% 54 40.7% 2 50% - - - HMMPfam_Beach,superfamily_BEACH domain PRKG1 5592 genome.wustl.edu 37 10 53564356 53564356 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006258.2 +1 validated p.V202L 1.000 104 0% 146 41.1% 0 - benign(0.327) tolerated(0.08) neutral(0.402) HMMPfam_cNMP_binding,HMMSmart_SM00100,superfamily_cAMP-binding domain-like PCDH15 65217 genome.wustl.edu 37 10 55568512 55568512 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001142769.1 -1 reviewed p.K1771N 0.000 51 0% 216 43.5% 0 - unknown(0) deleterious(0) - NULL PCDH15 65217 genome.wustl.edu 37 10 55583046 55583046 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001142763.1 -1 reviewed p.Q1487H 0.043 70 0% 145 40.7% 0 - benign(0.001) deleterious(0.01) neutral(0.406) NULL PCDH15 65217 genome.wustl.edu 37 10 55782688 55782688 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001142763.1 -1 reviewed p.E835D 1.000 37 0% 105 45.7% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_Cadherin,superfamily_Cadherin-like PCDH15 65217 genome.wustl.edu 37 10 55892762 55892762 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001142763.1 -1 reviewed p.S602F 1.000 35 0% 127 36.2% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like ANK3 288 genome.wustl.edu 37 10 61898785 61898785 + Missense_Mutation SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020987.2 -1 reviewed p.L892S 1.000 32 0% 105 44.8% 7 57.1% probably_damaging(1) deleterious(0) deleterious(0.945) NULL ANK3 288 genome.wustl.edu 37 10 61959948 61959948 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020987.2 -1 reviewed p.G477D 1.000 22 0% 93 39.8% 3 33.3% probably_damaging(1) tolerated(0.25) deleterious(0.537) HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK RHOBTB1 9886 genome.wustl.edu 37 10 62648292 62648292 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014836.4 -1 reviewed p.F378L 0.001 18 0% 30 40% 2 0% possibly_damaging(0.712) tolerated(0.21) neutral(0.301) HMMSmart_BTB,superfamily_BTB/POZ_fold ARID5B 84159 genome.wustl.edu 37 10 63810652 63810652 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_032199.2 +1 validated p.N247H 1.000 54 0% 121 44.6% 1 0% probably_damaging(0.998) deleterious(0) deleterious(0.919) NULL ZNF365 22891 genome.wustl.edu 37 10 64429984 64429984 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_199451.2 +1 reviewed p.D438N 0.000 51 0% 151 29.8% 0 - unknown(0) - - NULL NRBF2 29982 genome.wustl.edu 37 10 64905997 64905997 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_030759.3 +1 validated p.R20H 0.997 36 0% 122 39.3% 4 0% probably_damaging(1) tolerated(0.1) deleterious(0.786) NULL JMJD1C 221037 genome.wustl.edu 37 10 64975327 64975327 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_032776.1 -1 validated p.V270I 1.000 49 0% 124 48.4% 0 - benign(0) tolerated(0.89) - NULL LRRTM3 347731 genome.wustl.edu 37 10 68687033 68687033 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_178011.3 +1 validated p.R120I 1.000 25 0% 54 31.5% 0 - possibly_damaging(0.95) deleterious(0.01) deleterious(0.799) HMMSmart_SM00369,superfamily_L domain-like HERC4 26091 genome.wustl.edu 37 10 69714447 69714447 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_022079.2 -1 validated p.E756* 1.000 73 0% 154 46.8% 13 0% - - - HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain MYPN 84665 genome.wustl.edu 37 10 69955234 69955234 + Missense_Mutation SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_032578.2 +1 validated p.M1035V 1.000 15 0% 76 34.2% 0 - benign(0.026) tolerated(0.2) neutral(0.050) HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin TET1 80312 genome.wustl.edu 37 10 70432653 70432653 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_030625.2 +1 validated p.R1559C 1.000 63 0% 229 45% 0 - probably_damaging(0.997) deleterious(0) deleterious(0.911) NULL STOX1 219736 genome.wustl.edu 37 10 70641825 70641825 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001130161.2 +1 reviewed p.T141M 0.994 66 0% 241 42.7% 8 12.5% probably_damaging(0.999) deleterious(0.01) deleterious(0.896) HMMPfam_Stork_head DDX21 9188 genome.wustl.edu 37 10 70719619 70719619 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004728.2 +1 reviewed p.E49* 0.995 34 0% 61 44.3% 2 100% - - - NULL P4HA1 5033 genome.wustl.edu 37 10 74806772 74806772 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000917.3 -1 reviewed p.D330Y 1.000 47 0% 209 50.2% 51 58.8% probably_damaging(0.999) deleterious(0.03) deleterious(0.855) NULL SYNPO2L 79933 genome.wustl.edu 37 10 75413402 75413402 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001114133.1 -1 validated p.D89 0.004 19 0% 15 53.3% 0 - - - - superfamily_PDZ domain-like SYNPO2L 79933 genome.wustl.edu 37 10 75413977 75413977 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001114133.1 -1 validated p.I56S 1.000 29 0% 63 33.3% 0 - possibly_damaging(0.922) deleterious(0) deleterious(0.816) HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like PLAU 5328 genome.wustl.edu 37 10 75673383 75673383 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002658.3 +1 reviewed p.E183* 0.932 28 0% 55 54.5% 3 0% - - - HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases KCNMA1 3778 genome.wustl.edu 37 10 78880760 78880760 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001014797.2 -1 reviewed p.I285M 0.999 100 0% 131 37.4% 0 - probably_damaging(0.998) deleterious(0) deleterious(0.919) HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels NRG3 10718 genome.wustl.edu 37 10 83635596 83635596 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001010848.3 +1 reviewed p.R167H 1.000 26 0% 39 33.3% 0 - probably_damaging(0.999) tolerated(0.09) deleterious(0.787) NULL PTEN 5728 genome.wustl.edu 37 10 89692904 89692904 + Missense_Mutation SNP C C G rs121909224 byCluster TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000371953 +1 known p.R130G 1.000 66 0% 204 37.7% 19 73.6% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_DSPc,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II PTEN 5728 genome.wustl.edu 37 10 89692953 89692953 + Nonsense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000371953 +1 known p.L146* 1.000 47 0% 154 43.5% 21 4.7% - - - HMMPfam_DSPc,HMMSmart_SM00404,superfamily_(Phosphotyrosine protein) phosphatases II FAS 355 genome.wustl.edu 37 10 90770563 90770563 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000043.3 +1 reviewed p.I187L 0.000 128 0% 340 34.4% 8 62.5% - - - NULL IFIT2 3433 genome.wustl.edu 37 10 91065731 91065731 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001547.4 +1 validated p.K6N 0.002 32 0% 54 44.4% 1 0% unknown(0) tolerated(0.12) - NULL PCGF5 84333 genome.wustl.edu 37 10 93021104 93021104 + Nonsense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_032373.3 +1 provisional p.R166* 1.000 68 0% 55 40% 0 - - - - NULL KIF11 3832 genome.wustl.edu 37 10 94408130 94408130 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004523.3 +1 reviewed p.K903N 0.098 74 0% 113 56.6% 4 0% possibly_damaging(0.926) tolerated(0.11) deleterious(0.646) NULL HHEX 3087 genome.wustl.edu 37 10 94454331 94454331 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002729.4 +1 reviewed p.E207* 0.988 33 0% 92 42.4% 3 0% - - - NULL EXOC6 54536 genome.wustl.edu 37 10 94675631 94675631 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_019053.4 +1 reviewed p.L260F 0.027 117 0% 179 38% 4 25% benign(0) tolerated(0.72) neutral(0.002) NULL NOC3L 64318 genome.wustl.edu 37 10 96121506 96121506 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_022451.9 -1 provisional p.E45* 1.000 257 0% 470 38.3% 0 - - - - NULL HPSE2 60495 genome.wustl.edu 37 10 100995554 100995554 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_021828.4 -1 reviewed p.R2 1.000 15 0% 33 33.3% 0 - - - - NULL DNMBP 23268 genome.wustl.edu 37 10 101715312 101715312 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015221.2 -1 validated p.R640Q 0.022 55 0% 50 52% 0 - probably_damaging(0.986) deleterious(0.03) deleterious(0.799) NULL CUEDC2 79004 genome.wustl.edu 37 10 104184080 104184080 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024040.2 -1 validated p.E118K 0.459 12 0% 60 41.7% 73 50.6% benign(0.025) tolerated(0.61) neutral(0.005) NULL SH3PXD2A 9644 genome.wustl.edu 37 10 105372875 105372875 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000420222 -1 known p.E258* 1.000 15 0% 92 41.3% 5 20% probably_damaging(0.999) deleterious(0) deleterious(0.935) superfamily_SH3-domain SLK 9748 genome.wustl.edu 37 10 105762395 105762395 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014720.2 +1 provisional p.K487Q 0.002 79 0% 73 34.2% 1 100% benign(0) tolerated(0.65) neutral(0.003) superfamily_Protein kinase-like (PK-like) COL17A1 1308 genome.wustl.edu 37 10 105831826 105831826 + Nonsense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000494.3 -1 reviewed p.R143* 1.000 41 0% 115 49.6% 1 0% - - - NULL WDR96 80217 genome.wustl.edu 37 10 105889948 105889948 + Silent SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000434629 -1 known p.L981R 0.991 177 0% 539 36.2% 34 70.5% - - - NULL WDR96 80217 genome.wustl.edu 37 10 105956626 105956626 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_025145.5 -1 provisional p.I426M 0.013 72 0% 130 43.1% 12 33.3% benign(0.417) deleterious(0.03) deleterious(0.499) superfamily_WD40 repeat-like PNLIPRP3 119548 genome.wustl.edu 37 10 118225624 118225624 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001011709.2 +1 validated p.L291I 0.962 201 0% 445 38% 0 - benign(0.332) tolerated(0.22) neutral(0.146) HMMPfam_Lipase,superfamily_alpha/beta-Hydrolases KIAA1598 57698 genome.wustl.edu 37 10 118674895 118674895 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001127211.1 -1 validated p.P432 0.469 55 0% 184 41.8% 11 72.7% - - - NULL RAB11FIP2 22841 genome.wustl.edu 37 10 119798706 119798706 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014904.2 -1 validated p.E348* 1.000 160 0% 296 36.8% 0 - - - - NULL GRK5 2869 genome.wustl.edu 37 10 121196273 121196273 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005308.2 +1 reviewed p.F283 0.929 26 0% 97 43.3% 3 33.3% - - - HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase BAG3 9531 genome.wustl.edu 37 10 121411274 121411274 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004281.3 +1 reviewed p.K29N 1.000 7 0.000 13 0.308 40 40% unknown(0) deleterious(0) - HMMPfam_WW,HMMSmart_WW,PatternScan_WW_DOMAIN_1,superfamily_WW_Rsp5_WWP WDR11 55717 genome.wustl.edu 37 10 122619762 122619762 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018117.11 +1 reviewed p.S165Y 1.000 38 0% 122 37.7% 4 75% probably_damaging(0.992) deleterious(0.03) deleterious(0.812) superfamily_WD40_like C10orf137 26098 genome.wustl.edu 37 10 127451880 127451880 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015608.2 +1 validated p.E1152K 0.955 47 0% 83 26.5% 9 77.7% benign(0.001) tolerated(0.11) neutral(0.272) NULL DOCK1 1793 genome.wustl.edu 37 10 129231659 129231659 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000398025 +1 known p.S1721L 0.998 33 0% 106 34% 13 53.8% possibly_damaging(0.925) tolerated(0.3) neutral(0.402) NULL MKI67 4288 genome.wustl.edu 37 10 129907047 129907047 + Silent SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002417.4 -1 reviewed p.T1019 0.000 130 0.8% 483 38.1% 0 - - - - HMMPfam_K167R MKI67 4288 genome.wustl.edu 37 10 129913909 129913909 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002417.4 -1 reviewed p.E255* 0.000 57 0% 170 46.5% 0 - - - - NULL DPYSL4 10570 genome.wustl.edu 37 10 134006168 134006168 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006426.2 +1 validated p.I45 0.827 28 0% 73 45.2% 0 - - - - superfamily_Composite domain of metallo-dependent hydrolases MUC5B 727897 genome.wustl.edu 37 11 1266525 1266525 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002458.1 +1 validated p.S2808 0.000 202 0% 301 10% 327 3.9% - - - NULL MUC5B 727897 genome.wustl.edu 37 11 1270178 1270178 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002458.1 +1 validated p.T4026M 0.006 164 0% 305 24.9% 358 34% unknown(0) - - NULL OR52K2 119774 genome.wustl.edu 37 11 4471177 4471177 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001005172.2 +1 validated p.A203V 1.000 70 0% 391 38.1% 0 - probably_damaging(0.997) tolerated(0.57) deleterious(0.472) HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like OR51S1 119692 genome.wustl.edu 37 11 4869969 4869969 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001004758.1 -1 provisional p.S157Y 0.000 38 0% 65 35.4% 0 - benign(0.004) deleterious(0.04) neutral(0.349) HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like OR52A5 390054 genome.wustl.edu 37 11 5153632 5153632 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001005160.2 -1 validated p.P81S 0.998 68 0% 86 47.7% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_7tm_1,superfamily_SSF81321 OR52A1 23538 genome.wustl.edu 37 11 5173437 5173437 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_012375.2 -1 validated p.R55C 0.000 19 0% 39 35.9% 0 - probably_damaging(0.98) deleterious(0.03) deleterious(0.788) HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like OR52B6 340980 genome.wustl.edu 37 11 5602711 5602711 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001005162.2 +1 validated p.G202D 0.999 36 0% 107 40.2% 0 - probably_damaging(0.998) tolerated(0.06) deleterious(0.797) HMMPfam_7tm_1,superfamily_SSF81321 TRIM5 85363 genome.wustl.edu 37 11 5699533 5699533 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000438025 -1 known p.R92Q 0.000 28 0% 155 49% 7 71.4% - - - NULL DNHD1 144132 genome.wustl.edu 37 11 6559702 6559702 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_144666.2 +1 provisional p.E1030K 0.633 24 0% 56 33.9% 0 - possibly_damaging(0.936) tolerated(0.76) neutral(0.383) HMMPfam_DHC_N2 RRP8 23378 genome.wustl.edu 37 11 6623118 6623118 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015324.2 -1 provisional p.N143H 0.003 67 0% 239 41.4% 13 61.5% benign(0.002) tolerated(0.62) neutral(0.004) NULL DCHS1 8642 genome.wustl.edu 37 11 6653553 6653553 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003737.2 -1 reviewed p.A1064T 1.000 23 0% 60 23.3% 0 - benign(0) tolerated(1) - HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin WEE1 7465 genome.wustl.edu 37 11 9606861 9606861 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003390.3 +1 reviewed p.E449K 1.000 154 0% 299 46.8% 6 33.3% possibly_damaging(0.439) tolerated(0.14) neutral(0.392) superfamily_Kinase_like,HMMPfam_Pkinase BTBD10 84280 genome.wustl.edu 37 11 13424798 13424798 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_032320.5 -1 validated p.F345C 1.000 88 0% 186 21% 4 25% possibly_damaging(0.772) deleterious(0) deleterious(0.732) NULL SPON1 10418 genome.wustl.edu 37 11 14101562 14101562 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000310358 +1 known p.Y223S 1.000 34 0% 93 33.3% 21 0% unknown(0) - - HMMPfam_Spond_N ABCC8 6833 genome.wustl.edu 37 11 17482103 17482103 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000352.3 -1 reviewed p.A315T 1.000 10 0% 28 35.7% 0 - benign(0.027) tolerated(0.16) neutral(0.061) superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain SPTY2D1 144108 genome.wustl.edu 37 11 18636203 18636203 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_194285.2 -1 validated p.E540K 1.000 27 0% 91 36.3% 9 66.6% unknown(0) deleterious(0.04) - NULL E2F8 79733 genome.wustl.edu 37 11 19256469 19256469 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024680.2 -1 validated p.I196 0.912 47 0% 155 40.6% 1 100% - - - NULL SLC6A5 9152 genome.wustl.edu 37 11 20636356 20636356 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004211.3 +1 reviewed p.E373* 1.000 46 0% 140 49.3% 0 - - - - HMMPfam_SNF SLC6A5 9152 genome.wustl.edu 37 11 20668479 20668479 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004211.3 +1 reviewed p.T690N 0.999 31 0% 136 37.5% 0 - benign(0.226) deleterious(0.02) neutral(0.406) HMMPfam_SNF ANO5 203859 genome.wustl.edu 37 11 22284576 22284576 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_213599.2 +1 reviewed p.E629* 1.000 83 0% 214 37.4% 0 - - - - HMMPfam_DUF590 SLC17A6 57084 genome.wustl.edu 37 11 22398170 22398170 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020346.2 +1 validated p.L455 1.000 44 0% 220 38.6% 0 - - - - HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter ANO3 63982 genome.wustl.edu 37 11 26463504 26463504 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_031418.2 +1 validated p.S29L 0.138 31 0% 85 27.1% 0 - possibly_damaging(0.621) deleterious(0.01) deleterious(0.622) NULL CCDC73 493860 genome.wustl.edu 37 11 32635419 32635419 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001008391.2 -1 validated p.E815D 0.437 121 0% 199 40.7% 0 - benign(0.008) deleterious(0) neutral(0.445) NULL CCDC73 493860 genome.wustl.edu 37 11 32722337 32722337 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001008391.2 -1 validated p.K105N 1.000 56 0% 79 31.6% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) NULL PAMR1 25891 genome.wustl.edu 37 11 35453938 35453938 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015430.2 -1 validated p.P727H 1.000 31 0% 68 41.2% 35 5.7% probably_damaging(0.968) tolerated(0.12) deleterious(0.670) HMMPfam_Trypsin,HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys API5 8539 genome.wustl.edu 37 11 43340247 43340247 + Nonsense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001142930.1 +1 validated p.R43* 1.000 49 0% 184 37.5% 2 50% - - - HMMPfam_API5,superfamily_ARM-type_fold HSD17B12 51144 genome.wustl.edu 37 11 43702511 43702511 + Missense_Mutation SNP T T A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_016142.2 +1 validated p.V45D 0.860 16 0% 32 46.9% 9 22.2% probably_damaging(0.996) deleterious(0) deleterious(0.906) NULL OR4C12 283093 genome.wustl.edu 37 11 50003758 50003758 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001005270.2 -1 validated p.G94W 0.270 25 0% 53 50.9% 0 - benign(0.02) deleterious(0.01) neutral(0.407) HMMPfam_7tm_1,superfamily_SSF81321 TRIM48 79097 genome.wustl.edu 37 11 55033090 55033090 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024114.3 +1 validated p.K158N 0.015 43 0% 96 39.6% 0 - benign(0.15) tolerated(0.31) neutral(0.040) NULL OR4A15 81328 genome.wustl.edu 37 11 55135753 55135753 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001005275.1 +1 provisional p.D132N 0.000 54 0% 86 43% 0 - benign(0.066) tolerated(0.31) neutral(0.032) HMMPfam_7tm_1,superfamily_SSF81321 OR4A15 81328 genome.wustl.edu 37 11 55136122 55136122 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001005275.1 +1 provisional p.T255P 0.000 62 0% 120 40% 0 - possibly_damaging(0.44) deleterious(0.01) deleterious(0.549) HMMPfam_7tm_1,superfamily_SSF81321 ENSG00000181943 0 genome.wustl.edu 37 11 55259154 55259154 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000314657 +1 known p.L146I 0.000 65 0% 124 29.8% 0 - - - - HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like OR4P4 81300 genome.wustl.edu 37 11 55406622 55406622 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001004124.1 +1 provisional p.F263L 0.001 31 0% 104 87.5% 0 - benign(0) tolerated(0.41) neutral(0.015) HMMPfam_7tm_1,superfamily_SSF81321 OR5D18 219438 genome.wustl.edu 37 11 55587477 55587477 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001001952.1 +1 provisional p.F124 0.616 45 0% 141 44.7% 0 - - - - HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321 CTNND1 1500 genome.wustl.edu 37 11 57576003 57576003 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001085458.1 +1 validated p.E745* 0.993 27 0% 47 36.2% 23 17.3% - - - superfamily_ARM repeat OR5AN1 390195 genome.wustl.edu 37 11 59132473 59132473 + Missense_Mutation SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001004729.1 +1 provisional p.D181G 0.953 56 0% 121 40.5% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_7tm_1,superfamily_SSF81321 MS4A4E 643680 genome.wustl.edu 37 11 59980517 59980517 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XM_931886.3 -1 model p.S163* 0.000 7 0.000 16 0.250 0 - - - - HMMPfam_CD20 MS4A4A 51338 genome.wustl.edu 37 11 60068514 60068514 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_148975.1 +1 reviewed p.R124I 0.886 383 0% 575 41.4% 8 0% probably_damaging(0.954) deleterious(0.04) deleterious(0.746) HMMPfam_CD20 MS4A8B 83661 genome.wustl.edu 37 11 60468341 60468341 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_031457.1 +1 reviewed p.S3L 0.003 29 0% 138 39.1% 585 44.1% benign(0.429) tolerated(0.08) neutral(0.440) NULL PGA5 5222 genome.wustl.edu 37 11 61018711 61018711 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014224.2 +1 validated p.F375 0.957 32 0% 156 41% 0 - - - - HMMPfam_Asp,superfamily_Pept_Aspartic C11orf9 745 genome.wustl.edu 37 11 61543557 61543557 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001127392.1 +1 validated p.I447 0.855 37 0% 46 41.3% 0 - - - - HMMPfam_NDT80_PhoG,superfamily_p53-like transcription factors CATSPER1 117144 genome.wustl.edu 37 11 65788349 65788349 + Silent SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_053054.3 -1 reviewed p.I620 0.997 25 0% 27 40.7% 0 - - - - HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels RCE1 9986 genome.wustl.edu 37 11 66611760 66611760 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005133.2 +1 reviewed p.L126I 1.000 89 0% 219 39.7% 10 30% probably_damaging(0.996) deleterious(0) deleterious(0.906) NULL C11orf86 254439 genome.wustl.edu 37 11 66743066 66743066 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001136485.1 +1 predicted p.A78V 0.128 16 0% 10 50% 0 - benign(0.121) deleterious(0.05) neutral(0.355) NULL PPP1CA 5499 genome.wustl.edu 37 11 67168230 67168230 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001008709.1 -1 reviewed p.E127D 1.000 24 0% 66 40.9% 431 44.5% possibly_damaging(0.803) deleterious(0.03) deleterious(0.667) HMMPfam_Metallophos,HMMSmart_PP2Ac,superfamily_SSF56300 CCDC89 220388 genome.wustl.edu 37 11 85396894 85396894 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152723.1 -1 provisional p.L94I 1.000 27 0% 60 46.7% 3 33.3% probably_damaging(0.959) deleterious(0.03) deleterious(0.767) NULL SYTL2 54843 genome.wustl.edu 37 11 85435681 85435681 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_206927.2 -1 reviewed p.E607* 0.994 55 0% 116 44.8% 0 - - - - NULL TYR 7299 genome.wustl.edu 37 11 88911494 88911494 + Missense_Mutation SNP G G A rs13312741 byCluster;byFrequency TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000372.4 +1 reviewed p.D125N 0.998 25 0% 54 42.6% 0 - benign(0.01) tolerated(0.15) neutral(0.241) superfamily_Di-copper centre-containing domain FOLH1B 219595 genome.wustl.edu 37 11 89424292 89424292 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_153696.2 +1 provisional p.M314I 0.974 117 0% 216 43.1% 0 - - - - HMMPfam_TFR_dimer,superfamily_Transferrin_rcpt-like_dimerise ENSG00000234376 0 genome.wustl.edu 37 11 89486524 89486524 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000411859 -1 known p.S204Y 0.676 137 0% 221 32.6% 0 - - - - NULL CHORDC1 26973 genome.wustl.edu 37 11 89944392 89944392 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_012124.2 -1 validated p.N142H 0.508 169 0% 335 47.2% 16 25% benign(0.034) tolerated(0.11) neutral(0.274) NULL HEPHL1 341208 genome.wustl.edu 37 11 93826783 93826783 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001098672.1 +1 validated p.R804Q 0.537 33 0% 117 35% 0 - benign(0.005) tolerated(0.58) neutral(0.005) superfamily_Cupredoxin CNTN5 53942 genome.wustl.edu 37 11 100141898 100141898 + Nonsense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014361.2 +1 reviewed p.R747* 0.994 53 0% 118 45.8% 0 - - - - HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III ARHGAP42 143872 genome.wustl.edu 37 11 100812581 100812581 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152432.2 +1 provisional p.M300R 1.000 119 0% 150 40.7% 0 - probably_damaging(0.996) deleterious(0) deleterious(0.906) HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like KIAA1377 57562 genome.wustl.edu 37 11 101833844 101833844 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020802.2 +1 validated p.S693Y 0.000 33 0% 65 44.6% 3 0% possibly_damaging(0.814) deleterious(0) deleterious(0.752) NULL BIRC2 329 genome.wustl.edu 37 11 102221343 102221343 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001166.3 +1 reviewed p.S253Y 0.739 36 0% 121 48.8% 9 66.6% benign(0.133) deleterious(0.04) neutral(0.360) NULL PDGFD 80310 genome.wustl.edu 37 11 103866881 103866881 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_025208.4 -1 reviewed p.K141T 0.999 157 0% 333 38.7% 1 0% benign(0.001) tolerated(0.88) - HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain GUCY1A2 2977 genome.wustl.edu 37 11 106558442 106558442 + Missense_Mutation SNP A A G rs184165416 by1000genomes TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000855.1 -1 validated p.S678P 1.000 31 0% 86 26.7% 0 - probably_damaging(1) tolerated(0.3) deleterious(0.528) HMMPfam_Guanylate_cyc,superfamily_Adenylyl and guanylyl cyclase catalytic domain CWF19L2 143884 genome.wustl.edu 37 11 107197723 107197723 + Silent SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152434.2 -1 validated p.R866 0.991 53 0% 160 31.9% 4 50% - - - HMMPfam_CwfJ_C_2 CWF19L2 143884 genome.wustl.edu 37 11 107313720 107313720 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152434.2 -1 validated p.K132T 1.000 87 0% 303 37.3% 1 0% benign(0.383) deleterious(0) deleterious(0.567) NULL RAB39A 54734 genome.wustl.edu 37 11 107832683 107832683 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_017516.1 +1 provisional p.R80Q 1.000 35 0% 65 35.4% 1 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases ATM 472 genome.wustl.edu 37 11 108218017 108218017 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000051.3 +1 reviewed p.L2866I 1.000 39 0% 112 38.4% 4 25% possibly_damaging(0.857) tolerated(0.12) deleterious(0.592) HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,superfamily_Protein kinase-like (PK-like),superfamily_ARM repeat,PatternScan_PI3_4_KINASE_2 ARHGAP20 57569 genome.wustl.edu 37 11 110451092 110451092 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020809.2 -1 validated p.L860I 0.783 65 0% 161 44.1% 0 - probably_damaging(0.968) deleterious(0) deleterious(0.855) NULL TTC12 54970 genome.wustl.edu 37 11 113196254 113196254 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_017868.3 +1 validated p.E111* 0.976 42 0% 73 39.7% 8 12.5% - - - HMMPfam_TPR_1,superfamily_ARM-type_fold,HMMSmart_TPR,superfamily_SSF48452 TMPRSS5 80975 genome.wustl.edu 37 11 113570406 113570406 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_030770.2 -1 reviewed p.A39V 0.000 40 0% 22 50% 0 - unknown(0) deleterious(0) - NULL ENSG00000244817 0 genome.wustl.edu 37 11 118182977 118182977 + RNA SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000501549 -1 known NULL 0.037 77 0% 232 39.2% 0 - - - - - MLL 4297 genome.wustl.edu 37 11 118373178 118373178 + Nonsense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005933.2 +1 validated p.R2188* 1.000 26 0% 48 35.4% 0 - - - - NULL PHLDB1 23187 genome.wustl.edu 37 11 118501935 118501935 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001144758.1 +1 validated p.R613 0.982 15 0.000 9 0.667 9 55.5% - - - NULL HYOU1 10525 genome.wustl.edu 37 11 118917135 118917135 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001130991.1 -1 reviewed p.E961* 0.726 26 0% 87 35.6% 95 51.5% - - - NULL TBCEL 219899 genome.wustl.edu 37 11 120957491 120957491 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001130047.1 +1 validated p.H321N 1.000 48 0% 99 29.3% 1 100% possibly_damaging(0.462) tolerated(0.33) neutral(0.175) NULL SORL1 6653 genome.wustl.edu 37 11 121348862 121348862 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003105.4 +1 reviewed p.K146N 0.990 114 0% 236 37.3% 1 0% benign(0) tolerated(0.48) neutral(0.011) HMMSmart_SM00602,superfamily_Oligoxyloglucan reducing end-specific cellobiohydrolase TMEM225 338661 genome.wustl.edu 37 11 123754849 123754849 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001013743.1 -1 provisional p.F132L 0.041 54 0% 78 41% 0 - possibly_damaging(0.753) tolerated(0.06) deleterious(0.599) NULL OR8G5 219865 genome.wustl.edu 37 11 124120963 124120963 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000341493 +1 known p.L181I 0.463 97 0% 279 41.9% 0 - - - - HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like STT3A 3703 genome.wustl.edu 37 11 125475575 125475575 + Missense_Mutation SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152713.3 +1 validated p.V187A 1.000 34 0% 220 33.6% 85 37.6% probably_damaging(0.984) deleterious(0.03) deleterious(0.795) HMMPfam_STT3 DDX25 29118 genome.wustl.edu 37 11 125788609 125788609 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_013264.3 +1 reviewed p.E375D 0.999 43 0% 216 42.6% 0 - benign(0) tolerated(0.33) neutral(0.024) HMMPfam_Helicase_C,HMMSmart_SM00490,superfamily_P-loop containing nucleoside triphosphate hydrolases ST3GAL4 6484 genome.wustl.edu 37 11 126278289 126278289 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006278.1 +1 provisional p.F171 0.356 52 0% 116 30.2% 10 20% - - - HMMPfam_Glyco_transf_29 BARX2 8538 genome.wustl.edu 37 11 129246050 129246050 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003658.4 +1 reviewed p.E40D 1.000 16 0% 56 41.1% 6 50% benign(0.071) tolerated(0.27) neutral(0.038) NULL SNX19 399979 genome.wustl.edu 37 11 130785489 130785489 + Missense_Mutation SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014758.2 -1 validated p.S116P 0.997 34 0% 42 47.6% 4 75% benign(0.307) tolerated(0.06) neutral(0.418) HMMPfam_PXA,HMMSmart_SM00313 GLB1L3 112937 genome.wustl.edu 37 11 134181026 134181026 + Missense_Mutation SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001080407.2 +1 validated p.Y417H 0.006 23 0% 59 39% 0 - benign(0.096) tolerated(0.12) neutral(0.268) NULL CACNA1C 775 genome.wustl.edu 37 12 2162748 2162748 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_199460.2 +1 reviewed p.R7M 1.000 34 0% 129 38.8% 0 - possibly_damaging(0.496) deleterious(0.01) deleterious(0.571) NULL CACNA1C 775 genome.wustl.edu 37 12 2614095 2614095 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_199460.2 +1 reviewed p.L401F 1.000 72 0% 274 42% 0 - probably_damaging(0.998) deleterious(0) deleterious(0.919) HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels FOXM1 2305 genome.wustl.edu 37 12 2983191 2983191 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_202002.1 -1 validated p.L152I 0.003 46 0% 231 42.4% 10 60% benign(0.078) tolerated(0.37) neutral(0.025) NULL TULP3 7289 genome.wustl.edu 37 12 3040323 3040323 + Missense_Mutation SNP C C T rs142402471 by1000genomes TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003324.4 +1 reviewed p.R205W 0.880 17 0% 69 40.6% 7 57.1% probably_damaging(0.999) tolerated(0.05) deleterious(0.836) HMMPfam_Tub,superfamily_Transcriptional factor tubby C-terminal domain C12orf4 57102 genome.wustl.edu 37 12 4645321 4645321 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020374.2 -1 predicted p.E14* 1.000 41 0% 135 34.8% 1 0% - - - NULL CHD4 1108 genome.wustl.edu 37 12 6702291 6702291 + Missense_Mutation SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001273.2 -1 reviewed p.D873G 1.000 33 0% 51 31.4% 12 50% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_SNF2_N,PatternScan_DEAH_ATP_HELICASE,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases CHD4 1108 genome.wustl.edu 37 12 6710189 6710189 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001273.2 -1 reviewed p.S277N 1.000 48 0% 215 39.5% 12 25% benign(0.132) tolerated(0.08) neutral(0.311) NULL C1S 716 genome.wustl.edu 37 12 7177820 7177820 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001734.3 +1 reviewed p.K644N 0.000 40 0% 54 35.2% 99 39.3% benign(0.001) tolerated(0.22) neutral(0.042) HMMPfam_Trypsin,HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys C1R 715 genome.wustl.edu 37 12 7188421 7188421 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000290575 -1 known p.A525 0.000 22 0% 49 44.9% 64 31.2% - - - HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases C1R 715 genome.wustl.edu 37 12 7241295 7241295 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000290575 -1 known p.E331K 0.002 48 0% 175 37.7% 54 27.7% benign(0) tolerated(1) - HMMPfam_Sushi,superfamily_Complement control module/SCR domain CD163 9332 genome.wustl.edu 37 12 7640350 7640350 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000396620 -1 known p.S585Y 0.000 34 0% 76 34.2% 0 - unknown(0) deleterious(0.03) - superfamily_SRCR-like GDF3 9573 genome.wustl.edu 37 12 7842983 7842983 + Nonsense_Mutation SNP T T A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020634.1 -1 reviewed p.K196* 0.157 48 0% 60 38.3% 4 0% - - - NULL C3AR1 719 genome.wustl.edu 37 12 8211461 8211461 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004054.2 -1 validated p.D441Y 1.000 36 0% 90 34.4% 7 0% probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_Family A G protein-coupled receptor-like KLRC1 3821 genome.wustl.edu 37 12 10602524 10602524 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002259.4 -1 reviewed p.R109I 0.001 78 0% 100 33% 0 - possibly_damaging(0.927) deleterious(0) deleterious(0.820) NULL DUSP16 80824 genome.wustl.edu 37 12 12633251 12633251 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_030640.2 -1 reviewed p.L241I 0.975 45 0% 178 47.8% 6 33.3% possibly_damaging(0.922) tolerated(0.46) neutral(0.384) HMMPfam_DSPc,HMMSmart_DSPc,superfamily_SSF52799 PDE3A 5139 genome.wustl.edu 37 12 20799802 20799802 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000921.3 +1 validated p.A828V 1.000 41 0% 120 40.8% 1 0% probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMPfam_PDEase_I,HMMSmart_HDc,superfamily_SSF109604 LST-3TM12 338821 genome.wustl.edu 37 12 21196454 21196454 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001009562.4 +1 validated p.R258M 0.000 149 0% 75 61.3% 0 - possibly_damaging(0.508) tolerated(0.09) neutral(0.467) HMMPfam_OATP,superfamily_MFS general substrate transporter LST-3TM12 338821 genome.wustl.edu 37 12 21242972 21242972 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001009562.4 +1 validated p.M619L 0.000 103 0% 117 41% 0 - benign(0.025) tolerated(0.39) neutral(0.017) NULL SLCO1B1 10599 genome.wustl.edu 37 12 21349967 21349967 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006446.4 +1 reviewed p.S272Y 0.933 210 0.5% 477 38.8% 0 - probably_damaging(0.996) deleterious(0) deleterious(0.906) HMMPfam_OATP,superfamily_MFS general substrate transporter PYROXD1 79912 genome.wustl.edu 37 12 21608129 21608129 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024854.3 +1 validated p.F184L 1.000 70 0% 153 50.3% 2 50% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Pyr_redox_2,superfamily_SSF51905 GYS2 2998 genome.wustl.edu 37 12 21733335 21733335 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_021957.3 -1 reviewed p.E82* 1.000 55 0% 191 35.1% 0 - - - - HMMPfam_Glycogen_syn,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase ETNK1 55500 genome.wustl.edu 37 12 22824229 22824229 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018638.4 +1 reviewed p.E331* 1.000 101 0% 223 34.1% 10 0% - - - HMMPfam_Choline_kinase,superfamily_Kinase_like LYRM5 144363 genome.wustl.edu 37 12 25357133 25357133 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001001660.2 +1 validated p.E54* 1.000 80 0% 75 46.7% 15 26.6% - - - HMMPfam_Complex1_LYR KRAS 3845 genome.wustl.edu 37 12 25398284 25398284 + Missense_Mutation SNP C C A rs121913529 byCluster TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_033360.2 -1 reviewed p.G12V 1.000 48 0% 159 43.4% 5 20% benign(0.048) deleterious(0) neutral(0.448) HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases ITPR2 3709 genome.wustl.edu 37 12 26812092 26812092 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002223.2 -1 validated p.E614* 1.000 214 0% 547 41.3% 0 - - - - HMMPfam_RYDR_ITPR STK38L 23012 genome.wustl.edu 37 12 27465575 27465575 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015000.3 +1 validated p.L163I 1.000 92 0% 335 36.7% 4 75% possibly_damaging(0.927) deleterious(0) deleterious(0.820) HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase LOC100287284 100287284 genome.wustl.edu 37 12 27916086 27916086 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XM_002343149.1 -1 model p.F243C 0.001 91 0% 248 36.3% 0 - probably_damaging(0.989) deleterious(0) deleterious(0.884) NULL OVCH1 341350 genome.wustl.edu 37 12 29586708 29586708 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_183378.2 -1 validated p.K1101N 0.003 402 0% 369 34.1% 0 - benign(0.091) - - NULL OVCH1 341350 genome.wustl.edu 37 12 29630358 29630358 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_183378.2 -1 validated p.A388T 0.001 68 0% 154 50.6% 0 - benign(0.328) tolerated(0.11) neutral(0.374) superfamily_Spermadhesin CUB domain DDX11 1663 genome.wustl.edu 37 12 31247735 31247735 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152438.1 +1 reviewed p.I487 0.933 101 0% 410 30% 2 0% - - - NULL OVOS2 144203 genome.wustl.edu 37 12 31283513 31283513 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XM_002343151.1 -1 model p.R1001 0.984 120 0% 120 30% 0 - - - - superfamily_Terpenoid cyclases/Protein prenyltransferases,HMMPfam_A2M_comp AMN1 196394 genome.wustl.edu 37 12 31850307 31850307 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001113402.1 -1 validated p.A193 0.993 107 0% 134 41% 0 - - - - superfamily_SSF52047 C12orf35 55196 genome.wustl.edu 37 12 32135147 32135147 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018169.3 +1 validated p.L420I 0.099 50 0% 51 29.4% 1 100% probably_damaging(0.998) deleterious(0) deleterious(0.919) NULL PDZRN4 29951 genome.wustl.edu 37 12 41903641 41903641 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_013377.3 +1 validated p.E119* 1.000 38 0% 65 40% 0 - - - - NULL GXYLT1 283464 genome.wustl.edu 37 12 42499729 42499729 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_173601.1 -1 validated p.R252Q 1.000 59 0% 167 39.5% 2 50% possibly_damaging(0.829) tolerated(0.27) neutral(0.348) HMMPfam_Glyco_transf_8,superfamily_Nucleotide-diphospho-sugar transferases ADAMTS20 80070 genome.wustl.edu 37 12 43833743 43833743 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_025003.3 -1 validated p.R807I 1.000 145 0% 326 39.6% 0 - probably_damaging(0.994) deleterious(0) deleterious(0.897) HMMPfam_ADAM_spacer1 SLC38A4 55089 genome.wustl.edu 37 12 47181702 47181702 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001143824.1 -1 validated p.F108C 0.999 33 0% 39 30.8% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Aa_trans DDX23 9416 genome.wustl.edu 37 12 49225092 49225092 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004818.2 -1 reviewed p.A691V 1.000 67 0% 86 29.1% 91 46.1% benign(0.008) tolerated(0.34) neutral(0.023) HMMPfam_Helicase_C,HMMSmart_SM00490,superfamily_P-loop containing nucleoside triphosphate hydrolases MLL2 8085 genome.wustl.edu 37 12 49415868 49415868 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003482.3 -1 validated p.K5493N 1.000 37 0% 85 24.7% 14 57.1% unknown(0) - - HMMPfam_SET,HMMSmart_SM00317,superfamily_SET domain LIMA1 51474 genome.wustl.edu 37 12 50571714 50571714 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001113546.1 -1 validated p.N472 0.145 59 0% 272 31.2% 14 42.8% - - - NULL TMPRSS12 283471 genome.wustl.edu 37 12 51237737 51237737 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_182559.2 +1 validated p.G100 0.000 25 0% 65 49.2% 0 - - - - HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases LOC100129218 100129218 genome.wustl.edu 37 12 52913943 52913943 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XM_001718439.2 +1 model p.E424K 0.002 75 0% 66 40.9% 50 54% - - - NULL KRT4 3851 genome.wustl.edu 37 12 53205637 53205637 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002272.2 -1 reviewed p.R270M 1.000 57 0% 225 41.3% 5 20% probably_damaging(0.994) deleterious(0) deleterious(0.897) HMMPfam_Filament NEUROD4 58158 genome.wustl.edu 37 12 55420784 55420784 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_021191.2 +1 validated p.E187D 1.000 31 0% 51 45.1% 0 - benign(0.038) tolerated(0.53) neutral(0.009) NULL MARS 4141 genome.wustl.edu 37 12 57910283 57910283 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004990.2 +1 reviewed p.A874 1.000 63 0% 102 30.4% 88 38.6% benign(0) tolerated(1) - HMMPfam_WHEP-TRS,PatternScan_WHEP_TRS_1,superfamily_S15/NS1_bind KIF5A 3798 genome.wustl.edu 37 12 57963333 57963333 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004984.2 +1 reviewed p.K328N 1.000 46 0% 63 52.4% 0 - possibly_damaging(0.912) deleterious(0) deleterious(0.808) HMMPfam_Kinesin,HMMSmart_SM00129 SLC16A7 9194 genome.wustl.edu 37 12 60168793 60168793 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004731.3 +1 provisional p.F239L 0.863 92 0% 100 38% 0 - benign(0.001) tolerated(1) - HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter MON2 23041 genome.wustl.edu 37 12 62981910 62981910 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015026.2 +1 validated p.S1655* 1.000 78 0% 144 30.6% 16 50% - - - superfamily_ARM-type_fold TMEM5 10329 genome.wustl.edu 37 12 64202558 64202558 + Nonsense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014254.1 +1 provisional p.R340* 1.000 24 0% 92 39.1% 37 64.8% - - - NULL IRAK3 11213 genome.wustl.edu 37 12 66641946 66641946 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_007199.2 +1 reviewed p.E596* 0.000 25 0% 41 46.3% 0 - - - - NULL CPSF6 11052 genome.wustl.edu 37 12 69653923 69653923 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_007007.2 +1 validated p.S472F 1.000 66 0% 243 38.3% 51 45% probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL RAB3IP 117177 genome.wustl.edu 37 12 70189042 70189042 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_175623.2 +1 validated p.R285I 0.998 31 0% 60 46.7% 13 61.5% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_Sec2p PTPRB 5787 genome.wustl.edu 37 12 70956819 70956819 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001109754.1 -1 reviewed p.A1325T 0.042 42 0% 70 48.6% 1 0% benign(0) tolerated(0.67) neutral(0.003) HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III TBC1D15 64786 genome.wustl.edu 37 12 72278770 72278770 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_022771.4 +1 reviewed p.E175* 1.000 70 0% 236 44.1% 1 0% - - - NULL MYF5 4617 genome.wustl.edu 37 12 81110890 81110890 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005593.2 +1 validated p.Y16 1.000 8 0.000 22 0.500 0 - - - - HMMPfam_Basic,HMMSmart_BASIC LRRIQ1 84125 genome.wustl.edu 37 12 85439801 85439801 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001079910.1 +1 validated p.L114V 0.993 79 0% 111 42.3% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL LRRIQ1 84125 genome.wustl.edu 37 12 85515480 85515480 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001079910.1 +1 validated p.S1128Y 0.953 120 0% 272 41.2% 2 0% probably_damaging(0.996) tolerated(1) neutral(0.462) superfamily_RNI-like ALX1 8092 genome.wustl.edu 37 12 85677394 85677394 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006982.2 +1 reviewed p.E91K 0.998 34 0% 46 58.7% 0 - probably_damaging(0.978) tolerated(0.34) neutral(0.444) NULL CEP290 80184 genome.wustl.edu 37 12 88465102 88465102 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_025114.3 -1 reviewed p.L1994F 0.998 291 0% 354 37% 3 33.3% benign(0.282) tolerated(0.18) neutral(0.142) NULL CEP290 80184 genome.wustl.edu 37 12 88505110 88505110 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_025114.3 -1 reviewed p.E746* 1.000 46 0% 104 38.5% 0 - - - - NULL DCN 1634 genome.wustl.edu 37 12 91540003 91540003 + Silent SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001920.3 -1 reviewed p.I304 0.998 39 0% 110 43.6% 94 0% - - - superfamily_L domain-like LOC100127919 100127919 genome.wustl.edu 37 12 93429143 93429143 + Missense_Mutation SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XM_001719900.1 +1 model p.S35P 0.003 13 0% 35 28.6% 0 - - - - NULL SOCS2 8835 genome.wustl.edu 37 12 93968645 93968645 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003877.3 +1 reviewed p.R96Q 1.000 43 0% 101 39.6% 3 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_SH2,HMMSmart_SM00252,superfamily_SH2 domain PLXNC1 10154 genome.wustl.edu 37 12 94673269 94673269 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005761.1 +1 provisional p.K1207Q 1.000 33 0% 117 47.9% 0 - benign(0.059) tolerated(0.6) neutral(0.009) superfamily_Rho_GAP,HMMPfam_Plexin_cytopl NTN4 59277 genome.wustl.edu 37 12 96104370 96104370 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_021229.3 -1 validated p.F343 0.943 29 0% 80 35% 12 41.6% - - - HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_EGF/Laminin C12orf63 374467 genome.wustl.edu 37 12 97057618 97057618 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_198520.2 +1 validated p.R249Q 1.000 80 1.3% 146 39% 0 - unknown(0) tolerated(0.29) - NULL C12orf63 374467 genome.wustl.edu 37 12 97133791 97133791 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_198520.2 +1 validated p.K766N 0.989 90 0% 112 33.9% 1 0% unknown(0) deleterious(0.03) - NULL LOC121456 121456 genome.wustl.edu 37 12 98850350 98850350 + RNA SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XR_016411.2 -1 model NULL 1.000 41 0% 88 42% 0 - - - - - UHRF1BP1L 23074 genome.wustl.edu 37 12 100453030 100453030 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015054.1 -1 validated p.N675K 0.966 38 0% 138 38.4% 1 0% benign(0.122) tolerated(0.32) neutral(0.034) NULL UHRF1BP1L 23074 genome.wustl.edu 37 12 100491268 100491268 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015054.1 -1 validated p.E182* 1.000 108 0% 248 43.5% 0 - - - - NULL DEPDC4 120863 genome.wustl.edu 37 12 100657291 100657291 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152317.2 -1 provisional p.F180V 0.000 59 0% 173 40.5% 2 50% benign(0.007) tolerated(0.56) neutral(0.006) NULL ANO4 121601 genome.wustl.edu 37 12 101368659 101368659 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_178826.3 +1 validated p.F163L 1.000 52 0% 236 44.1% 0 - benign(0.158) tolerated(0.67) neutral(0.017) NULL UTP20 27340 genome.wustl.edu 37 12 101684026 101684026 + Missense_Mutation SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014503.2 +1 validated p.N237D 1.000 110 0% 194 40.7% 0 - possibly_damaging(0.885) tolerated(0.49) neutral(0.356) superfamily_ARM repeat SPIC 121599 genome.wustl.edu 37 12 101880157 101880157 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152323.1 +1 provisional p.E119K 1.000 26 0% 101 40.6% 0 - possibly_damaging(0.535) deleterious(0.01) deleterious(0.587) HMMPfam_Ets,HMMSmart_ETS,superfamily_SSF46785 IGF1 3479 genome.wustl.edu 37 12 102874103 102874103 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001111285.1 -1 reviewed p.F19L 1.000 157 0% 301 41.5% 0 - benign(0.055) tolerated(0.07) neutral(0.323) NULL HSP90B1 7184 genome.wustl.edu 37 12 104341167 104341167 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003299.1 +1 provisional p.E781* 1.000 147 0% 346 40.5% 1643 63.4% - - - HMMPfam_HSP90 SART3 9733 genome.wustl.edu 37 12 108919884 108919884 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014706.3 -1 reviewed p.D788N 0.998 19 0% 76 35.5% 19 47.3% benign(0.005) tolerated(0.52) neutral(0.009) superfamily_RNA-binding domain RBD SSH1 54434 genome.wustl.edu 37 12 109198957 109198957 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018984.3 -1 validated p.R277C 1.000 116 0% 218 39% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_DEK_C,superfamily_DEK C-terminal domain ALKBH2 121642 genome.wustl.edu 37 12 109527909 109527909 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001001655.2 -1 validated p.T128 0.549 30 0% 67 32.8% 27 44.4% - - - NULL CCDC63 160762 genome.wustl.edu 37 12 111319065 111319065 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152591.1 +1 provisional p.R273H 0.972 13 0% 43 41.9% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) NULL NAA25 80018 genome.wustl.edu 37 12 112480974 112480974 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024953.3 -1 reviewed p.F764L 1.000 41 0% 87 37.9% 1 100% benign(0.059) tolerated(0.24) neutral(0.041) NULL MIR620 693205 genome.wustl.edu 37 12 116586367 116586367 + RNA SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000385232 -1 known NULL 0.000 116 0% 109 44% 0 - - - - - HPD 3242 genome.wustl.edu 37 12 122294532 122294532 + Splice_Site SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002150.2 -1 reviewed e5-1 1.000 38 0% 102 35.3% 0 - - - - - WDR66 144406 genome.wustl.edu 37 12 122380510 122380510 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_144668.4 +1 validated p.D357N 0.932 19 0% 29 44.8% 30 43.3% probably_damaging(0.993) tolerated(0.11) deleterious(0.722) HMMSmart_SM00320,superfamily_WD40 repeat-like KNTC1 9735 genome.wustl.edu 37 12 123075166 123075166 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014708.4 +1 reviewed p.R1338C 1.000 71 0% 381 39.9% 2 50% probably_damaging(1) deleterious(0.02) deleterious(0.883) NULL HCAR2 338442 genome.wustl.edu 37 12 123187282 123187282 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_177551.3 -1 validated p.C183* 0.368 27 0% 47 44.7% 0 - - - - HMMPfam_7tm_1,superfamily_SSF81321 MPHOSPH9 10198 genome.wustl.edu 37 12 123645763 123645763 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_022782.2 -1 validated p.D949Y 0.949 54 0% 204 37.7% 5 40% possibly_damaging(0.924) deleterious(0.04) deleterious(0.722) NULL DNAH10 196385 genome.wustl.edu 37 12 124333344 124333344 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_207437.3 +1 validated p.R1888Q 1.000 33 0% 180 39.4% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases BRI3BP 140707 genome.wustl.edu 37 12 125509878 125509878 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_080626.5 +1 validated p.V220M 1.000 11 0% 30 46.7% 19 42.1% possibly_damaging(0.817) deleterious(0.05) deleterious(0.654) NULL LOC121296 121296 genome.wustl.edu 37 12 127349845 127349845 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XM_002343223.1 +1 model p.E142* 0.994 21 0% 26 42.3% 0 - - - - NULL GLT1D1 144423 genome.wustl.edu 37 12 129373276 129373276 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_144669.1 +1 provisional p.L104I 0.990 31 0% 104 49% 0 - probably_damaging(0.996) tolerated(0.32) deleterious(0.486) NULL TMEM132D 121256 genome.wustl.edu 37 12 129559478 129559478 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_133448.2 -1 validated p.D748Y 0.997 13 0% 93 26.9% 0 - benign(0.257) deleterious(0.02) neutral(0.410) NULL POLE 5426 genome.wustl.edu 37 12 133250189 133250189 + Missense_Mutation SNP A A T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006231.2 -1 validated p.M444K 1.000 16 0% 27 48.1% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_POLBc,superfamily_RNaseH_fold ZNF605 100289635 genome.wustl.edu 37 12 133501975 133501975 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000360187 -1 known p.R637I 0.243 69 0% 108 41.7% 2 50% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 SACS 26278 genome.wustl.edu 37 13 23904941 23904941 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014363.4 -1 reviewed p.E4358D 1.000 38 0% 110 41.8% 0 - possibly_damaging(0.95) deleterious(0) deleterious(0.838) superfamily_Chaperone J-domain SACS 26278 genome.wustl.edu 37 13 23911549 23911549 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014363.4 -1 reviewed p.D2156Y 1.000 26 0% 54 37% 2 0% possibly_damaging(0.937) deleterious(0) deleterious(0.828) NULL MIPEP 4285 genome.wustl.edu 37 13 24443563 24443563 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005932.2 -1 reviewed p.F271V 1.000 31 0% 94 39.4% 12 33.3% possibly_damaging(0.909) tolerated(0.09) deleterious(0.658) HMMPfam_Peptidase_M3,superfamily_SSF55486 PARP4 143 genome.wustl.edu 37 13 25064843 25064843 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006437.3 -1 reviewed p.L393I 0.352 53 0% 232 35.8% 1 0% possibly_damaging(0.538) tolerated(0.42) neutral(0.196) HMMPfam_PARP,superfamily_SSF56399 PABPC3 5042 genome.wustl.edu 37 13 25670421 25670421 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_030979.2 +1 validated p.E29K 1.000 18 0% 46 34.8% 0 - benign(0.004) deleterious(0) neutral(0.445) HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD GPR12 2835 genome.wustl.edu 37 13 27333815 27333815 + Silent SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005288.3 -1 validated p.V50 0.956 23 0% 40 20% 0 - - - - superfamily_Family A G protein-coupled receptor-like FLT3 2322 genome.wustl.edu 37 13 28611388 28611388 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004119.2 -1 reviewed p.E415* 1.000 53 0% 188 43.1% 0 - - - - NULL RXFP2 122042 genome.wustl.edu 37 13 32363297 32363297 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_130806.3 +1 reviewed p.R371Q 0.114 48 0% 95 33.7% 0 - possibly_damaging(0.933) tolerated(0.44) neutral(0.392) HMMSmart_SM00369,superfamily_L domain-like BRCA2 675 genome.wustl.edu 37 13 32937562 32937562 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000059.3 +1 reviewed p.K2741N 0.902 36 0% 122 48.4% 0 - probably_damaging(1) tolerated(0.35) deleterious(0.520) HMMPfam_BRCA-2_OB1,superfamily_Nucleic_acid_OB STARD13 90627 genome.wustl.edu 37 13 33686017 33686017 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_178006.3 -1 validated p.K835N 1.000 35 0% 213 45.1% 2 0% probably_damaging(0.994) deleterious(0.01) deleterious(0.858) HMMSmart_SM00324,superfamily_GTPase activation domain GAP MAB21L1 4081 genome.wustl.edu 37 13 36050039 36050039 + Silent SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005584.4 -1 reviewed p.Y79 0.998 18 0% 50 30% 0 - - - - HMMPfam_Mab-21 NBEA 26960 genome.wustl.edu 37 13 36124683 36124683 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015678.4 +1 validated p.R2219C 1.000 57 0% 167 32.3% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_ARM repeat,superfamily_PH domain-like NBEA 26960 genome.wustl.edu 37 13 36239231 36239231 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015678.4 +1 validated p.P2770L 1.000 30 0% 110 42.7% 0 - possibly_damaging(0.49) deleterious(0.01) deleterious(0.569) HMMSmart_SM00320,superfamily_WD40 repeat-like CCNA1 8900 genome.wustl.edu 37 13 37016339 37016339 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003914.3 +1 reviewed p.S415* 1.000 70 0% 228 37.3% 73 6.8% - - - HMMPfam_Cyclin_C,HMMSmart_SM00385,superfamily_Cyclin-like POSTN 10631 genome.wustl.edu 37 13 38162047 38162047 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006475.2 -1 validated p.R173I 1.000 85 0% 165 38.2% 0 - probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMPfam_Fasciclin,HMMSmart_SM00554,superfamily_FAS1 domain TRPC4 7223 genome.wustl.edu 37 13 38211311 38211311 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003306.1 -1 validated p.S893Y 0.424 50 0% 96 36.5% 0 - possibly_damaging(0.509) deleterious(0) deleterious(0.615) NULL FREM2 341640 genome.wustl.edu 37 13 39453055 39453055 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_207361.4 +1 reviewed p.L2983I 0.098 33 0% 172 43% 0 - benign(0.322) tolerated(0.21) neutral(0.145) NULL STOML3 161003 genome.wustl.edu 37 13 39541004 39541004 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_145286.2 -1 validated p.G278 0.000 26 0% 54 40.7% 74 33.7% - - - NULL NAA16 79612 genome.wustl.edu 37 13 41936197 41936197 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024561.4 +1 validated p.E481* 1.000 49 0% 126 29.4% 2 0% - - - superfamily_TPR-like TNFSF11 8600 genome.wustl.edu 37 13 43155275 43155275 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003701.3 +1 reviewed p.R78K 1.000 36 0% 99 41.4% 0 - probably_damaging(0.994) deleterious(0) deleterious(0.897) NULL DNAJC15 29103 genome.wustl.edu 37 13 43681381 43681381 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_013238.2 +1 validated p.H150Q 0.249 67 0% 82 42.7% 106 59.4% possibly_damaging(0.733) deleterious(0.01) deleterious(0.673) NULL RB1 5925 genome.wustl.edu 37 13 49039375 49039375 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000321.2 +1 reviewed p.R787Q 1.000 104 0% 420 38.1% 13 76.9% probably_damaging(0.995) tolerated(0.35) deleterious(0.478) HMMPfam_Rb_C KPNA3 3839 genome.wustl.edu 37 13 50276534 50276534 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002267.3 -1 reviewed p.F485L 1.000 164 0% 286 44.1% 20 65% possibly_damaging(0.924) deleterious(0) deleterious(0.818) superfamily_ARM repeat NEK5 341676 genome.wustl.edu 37 13 52646104 52646104 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_199289.1 -1 provisional p.E634* 0.003 121 0% 320 40.6% 2 0% - - - NULL THSD1 55901 genome.wustl.edu 37 13 52972306 52972306 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018676.3 -1 reviewed p.L28I 0.068 12 0% 20 45% 0 - benign(0.027) tolerated(0.14) neutral(0.251) NULL TDRD3 81550 genome.wustl.edu 37 13 61103046 61103046 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_030794.2 +1 validated p.K470Q 0.995 24 0% 48 29.2% 6 66.6% probably_damaging(0.988) tolerated(0.16) deleterious(0.497) NULL PCDH20 64881 genome.wustl.edu 37 13 61986041 61986041 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_022843.3 -1 validated p.L731I 1.000 46 0% 79 49.4% 0 - probably_damaging(0.998) tolerated(0.33) deleterious(0.498) HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin PCDH9 5101 genome.wustl.edu 37 13 66878811 66878811 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_203487.2 -1 reviewed p.E1230D 1.000 24 0% 85 41.2% 0 - benign(0) tolerated(0.6) neutral(0.004) NULL MYCBP2 23077 genome.wustl.edu 37 13 77825385 77825385 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015057.4 -1 validated p.W723L 1.000 33 0% 98 43.9% 0 - probably_damaging(0.99) tolerated(0.8) neutral(0.442) superfamily_RCC1/BLIP-II SCEL 8796 genome.wustl.edu 37 13 78178539 78178539 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_144777.2 +1 validated p.K382N 1.000 68 0% 133 37.6% 0 - possibly_damaging(0.722) tolerated(0.48) neutral(0.273) NULL SLITRK1 114798 genome.wustl.edu 37 13 84455562 84455562 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_052910.1 -1 reviewed p.K27N 1.000 30 0% 68 36.8% 0 - benign(0.003) tolerated(0.62) neutral(0.004) NULL ABCC4 10257 genome.wustl.edu 37 13 95723921 95723921 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005845.3 -1 reviewed p.E1069* 1.000 46 0% 160 43.1% 1 100% - - - HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases ABCC4 10257 genome.wustl.edu 37 13 95847192 95847192 + Splice_Site SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005845.3 -1 reviewed e9-1 1.000 28 0% 103 45.6% 0 - - - - - LOC643677 643677 genome.wustl.edu 37 13 103387989 103387989 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XM_002344085.1 -1 model p.D4868Y 0.001 69 0% 129 34.9% 0 - probably_damaging(0.995) deleterious(0.01) deleterious(0.863) NULL LOC643677 643677 genome.wustl.edu 37 13 103389759 103389759 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XM_002344085.1 -1 model p.L4278I 0.000 93 0% 126 48.4% 0 - - - - NULL LOC643677 643677 genome.wustl.edu 37 13 103390827 103390827 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XM_002344085.1 -1 model p.E4003* 0.000 169 0% 172 33.1% 0 - - - - NULL TEX30 93081 genome.wustl.edu 37 13 103418828 103418828 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_138779.3 -1 validated p.D203Y 1.000 93 0% 213 41.8% 10 50% probably_damaging(0.977) deleterious(0.02) deleterious(0.802) superfamily_SSF53474 COL4A2 1284 genome.wustl.edu 37 13 111154020 111154020 + Nonsense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001846.2 +1 reviewed p.R1256* 0.916 14 0% 40 42.5% 72 0% - - - HMMPfam_Collagen ING1 3621 genome.wustl.edu 37 13 111372064 111372064 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005537.3 +1 reviewed p.E352K 1.000 23 0% 50 38% 92 45.6% probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_FYVE/PHD zinc finger TFDP1 7027 genome.wustl.edu 37 13 114288253 114288253 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_007111.4 +1 reviewed p.V175M 1.000 27 0% 71 33.8% 49 28.5% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_E2F_TDP,superfamily_SSF46785 GAS6 2621 genome.wustl.edu 37 13 114526470 114526470 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000820.2 -1 reviewed p.A511S 0.886 13 0% 30 46.7% 51 50.9% possibly_damaging(0.543) deleterious(0.01) deleterious(0.590) HMMSmart_LamG,superfamily_ConA_like_lec_gl CDC16 8881 genome.wustl.edu 37 13 115037737 115037737 + Missense_Mutation SNP C C G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001078645.1 +1 reviewed p.P561R 1.000 56 0% 91 38.5% 118 50.8% possibly_damaging(0.906) deleterious(0.02) deleterious(0.742) NULL TEP1 7011 genome.wustl.edu 37 14 20846195 20846195 + Silent SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_007110.4 -1 reviewed p.G1903 0.973 57 0% 31 61.3% 1 100% unknown(0) - - HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40 EDDM3B 64184 genome.wustl.edu 37 14 21238405 21238405 + Silent SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_022360.4 +1 validated p.E32 0.147 34 0% 85 36.5% 0 - - - - superfamily_RNaseA MYH6 4624 genome.wustl.edu 37 14 23857031 23857031 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002471.3 -1 validated p.K1487N 1.000 39 0% 98 36.7% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_Myosin_tail_1,superfamily_Prefoldin G2E3 55632 genome.wustl.edu 37 14 31074733 31074733 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_017769.3 +1 validated p.N345H 1.000 28 0% 66 40.9% 2 100% benign(0.003) deleterious(0.02) neutral(0.383) superfamily_HECT STRN3 29966 genome.wustl.edu 37 14 31416358 31416358 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001083893.1 -1 validated p.K218N 1.000 127 0% 268 11.9% 5 0% possibly_damaging(0.699) tolerated(0.34) neutral(0.275) NULL HECTD1 25831 genome.wustl.edu 37 14 31604752 31604752 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015382.2 -1 validated p.N1062H 1.000 94 0% 145 40% 4 75% benign(0) tolerated(0.11) neutral(0.272) NULL BRMS1L 84312 genome.wustl.edu 37 14 36337218 36337218 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_032352.3 +1 reviewed p.K278N 1.000 82 0% 120 36.7% 2 0% benign(0.001) tolerated(0.5) neutral(0.010) NULL CLEC14A 161198 genome.wustl.edu 37 14 38724535 38724535 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_175060.1 -1 provisional p.I231 0.000 7 0.000 6 0.667 17 0% - - - NULL KLHL28 54813 genome.wustl.edu 37 14 45414993 45414993 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_017658.3 -1 validated p.H47N 1.000 24 0% 51 37.3% 3 33.3% benign(0.008) tolerated(0.32) neutral(0.024) HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB FANCM 57697 genome.wustl.edu 37 14 45645115 45645115 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020937.2 +1 reviewed p.S1053* 0.495 14 0% 11 63.6% 0 - - - - NULL MIS18BP1 55320 genome.wustl.edu 37 14 45693269 45693269 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018353.4 -1 validated p.E841* 0.000 224 0% 376 43.1% 1 0% - - - NULL TXNDC16 57544 genome.wustl.edu 37 14 53010174 53010174 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020784.2 -1 validated p.Q34H 0.976 58 0% 118 34.7% 1 0% benign(0) deleterious(0) neutral(0.445) superfamily_Thioredoxin-like CNIH 10175 genome.wustl.edu 37 14 54903120 54903120 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005776.2 -1 validated p.K39N 1.000 60 0% 101 35.6% 73 47.9% probably_damaging(0.983) deleterious(0) deleterious(0.873) HMMPfam_Cornichon,PatternScan_CORNICHON KTN1 3895 genome.wustl.edu 37 14 56108419 56108419 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001079521.1 +1 validated p.D705Y 1.000 138 0% 150 44% 18 38.8% probably_damaging(0.957) deleterious(0.02) deleterious(0.784) NULL C14orf101 54916 genome.wustl.edu 37 14 57070568 57070568 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_017799.3 +1 validated p.A127V 1.000 42 0% 190 44.7% 2 50% benign(0.022) deleterious(0.04) neutral(0.350) NULL PSMA3 5684 genome.wustl.edu 37 14 58718929 58718929 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002788.2 +1 reviewed p.R66I 1.000 115 0% 239 40.2% 146 47.9% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Proteasome,superfamily_N-terminal nucleophile aminohydrolases (Ntn hydrolases) ARID4A 5926 genome.wustl.edu 37 14 58817869 58817869 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002892.3 +1 reviewed p.D495Y 0.999 88 0% 90 41.1% 0 - possibly_damaging(0.455) deleterious(0.02) deleterious(0.532) NULL LOC100287149 100287149 genome.wustl.edu 37 14 64194237 64194237 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XM_002343279.1 +1 model p.E67* 0.996 16 0% 22 54.5% 2 0% - - - NULL SYNE2 23224 genome.wustl.edu 37 14 64467319 64467319 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_182914.2 +1 reviewed p.E1174* 1.000 65 0% 120 44.2% 0 - - - - NULL SYNE2 23224 genome.wustl.edu 37 14 64518377 64518377 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_182914.2 +1 reviewed p.E2582D 0.031 58 0% 119 48.7% 0 - benign(0.047) - - NULL ESR2 2100 genome.wustl.edu 37 14 64716374 64716374 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001437.2 -1 reviewed p.G372E 1.000 37 0% 144 36.1% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Hormone_recep,HMMSmart_SM00430,superfamily_Nuclear receptor ligand-binding domain ZFYVE26 23503 genome.wustl.edu 37 14 68264861 68264861 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015346.3 -1 reviewed p.E706D 0.990 22 0% 89 41.6% 0 - probably_damaging(0.991) tolerated(0.18) deleterious(0.500) NULL RAD51B 5890 genome.wustl.edu 37 14 68352663 68352663 + Missense_Mutation SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_133509.2 +1 reviewed p.V177A 1.000 73 1.4% 178 42.1% 0 - possibly_damaging(0.939) tolerated(0.18) neutral(0.441) HMMSmart_SM00382,HMMPfam_Rad51,superfamily_P-loop containing nucleoside triphosphate hydrolases PCNX 22990 genome.wustl.edu 37 14 71511997 71511997 + Nonsense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014982.2 +1 validated p.R1339* 1.000 93 0% 263 34.2% 0 - - - - NULL NUMB 8650 genome.wustl.edu 37 14 73743325 73743325 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001005743.1 -1 reviewed p.F639 1.000 40 0% 120 31.7% 47 51% - - - NULL ACOT4 122970 genome.wustl.edu 37 14 74061781 74061781 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152331.3 +1 validated p.G230D 0.997 31 0% 118 41.5% 8 37.5% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_BAAT_C,superfamily_SSF53474 ALDH6A1 4329 genome.wustl.edu 37 14 74533536 74533536 + Nonsense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005589.2 -1 reviewed p.R366* 1.000 33 0% 77 33.8% 8 0% - - - HMMPfam_Aldedh,superfamily_ALDH-like FOS 2353 genome.wustl.edu 37 14 75748072 75748072 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005252.3 +1 reviewed p.S363N 1.000 9 0.000 24 0.625 1071 44.4% possibly_damaging(0.829) tolerated(0.24) neutral(0.352) NULL VASH1 22846 genome.wustl.edu 37 14 77242295 77242295 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014909.4 +1 validated p.F197L 1.000 16 0% 27 70.4% 0 - possibly_damaging(0.88) tolerated(0.32) neutral(0.367) NULL C14orf166B 145497 genome.wustl.edu 37 14 77311207 77311207 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_194287.2 +1 validated p.F230L 1.000 96 0% 212 46.7% 0 - unknown(0) tolerated(0.08) - HMMPfam_LRR_1,HMMSmart_SM00368,superfamily_RNI-like NRXN3 9369 genome.wustl.edu 37 14 79432432 79432432 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004796.4 +1 reviewed p.E447D 1.000 30 0% 69 52.2% 0 - benign(0.007) deleterious(0.02) neutral(0.383) HMMSmart_LamG,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2 NRXN3 9369 genome.wustl.edu 37 14 80158541 80158541 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001105250.1 +1 reviewed p.Q209H 1.000 72 0% 110 47.3% 0 - benign(0.149) deleterious(0.02) neutral(0.396) HMMSmart_LamG,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2 FLRT2 23768 genome.wustl.edu 37 14 86088381 86088381 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_013231.4 +1 reviewed p.P175S 1.000 22 0% 85 36.5% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_SSF52058 ZC3H14 79882 genome.wustl.edu 37 14 89061174 89061174 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_207662.3 +1 validated p.E35A 1.000 50 0% 153 40.5% 0 - possibly_damaging(0.832) deleterious(0) deleterious(0.762) NULL RPS6KA5 9252 genome.wustl.edu 37 14 91444857 91444857 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004755.2 -1 validated p.V63L 1.000 51 0% 244 41.8% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_S_TKc,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase BTBD7 55727 genome.wustl.edu 37 14 93760420 93760420 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001002860.2 -1 validated p.D316Y 1.000 41 0% 105 40% 1 0% benign(0.003) deleterious(0) neutral(0.445) HMMSmart_SM00225,superfamily_POZ domain DDX24 57062 genome.wustl.edu 37 14 94526870 94526870 + Missense_Mutation SNP T T A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020414.3 -1 reviewed p.Q496L 1.000 59 0% 90 38.9% 63 47.6% benign(0.113) tolerated(0.09) neutral(0.305) HMMPfam_DEAD,HMMSmart_DEXDc,superfamily_SSF52540 SERPINA12 145264 genome.wustl.edu 37 14 94964632 94964632 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_173850.2 -1 provisional p.E35K 0.000 19 0% 82 28% 0 - benign(0) tolerated(0.73) neutral(0.002) superfamily_Prot_inh_serpin MIR539 664612 genome.wustl.edu 37 14 101513724 101513724 + RNA SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000365690 +1 known NULL 1.000 134 0.7% 307 39.1% 0 - - - - - MIR369 442914 genome.wustl.edu 37 14 101531976 101531976 + RNA SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000362155 +1 known NULL 1.000 102 0% 239 38.1% 0 - - - - - PPP1R13B 23368 genome.wustl.edu 37 14 104245134 104245134 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015316.2 -1 reviewed p.R101Q 0.962 130 0% 392 35.7% 6 100% probably_damaging(0.997) tolerated(0.13) deleterious(0.719) NULL AHNAK2 113146 genome.wustl.edu 37 14 105419205 105419205 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_138420.2 -1 validated p.P861 0.000 45 0% 150 37.3% 0 - - - - NULL LOC729722 729722 genome.wustl.edu 37 15 20086526 20086526 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XM_001716538.2 +1 model p.N206H 0.001 22 0% 46 21.7% 0 - - - - HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK ENSG00000215407 0 genome.wustl.edu 37 15 20434029 20434029 + Silent SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000400226 -1 known p.I531 0.998 71 0% 278 14% 9 0% - - - NULL ENSG00000215407 0 genome.wustl.edu 37 15 20445994 20445994 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000400226 -1 known p.N430 0.998 21 0% 64 14.1% 0 - - - - HMMSmart_SM00228,superfamily_PDZ domain-like ENSG00000215407 0 genome.wustl.edu 37 15 20456732 20456732 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000400226 -1 known p.E250* 1.000 44 0% 145 11.7% 0 - - - - HMMPfam_BRO1 LOC646096 646096 genome.wustl.edu 37 15 20488798 20488798 + RNA SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XR_040858.2 +1 model NULL 1.000 74 0% 180 15% 0 - - - - - OR4M2 390538 genome.wustl.edu 37 15 22369069 22369069 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001004719.2 +1 validated p.R165Q 0.012 88 0% 315 35.2% 0 - benign(0.242) tolerated(1) neutral(0.025) HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like LOC653061 653061 genome.wustl.edu 37 15 23605590 23605590 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XM_002343324.1 +1 model p.E237* 0.089 53 0% 151 13.2% 0 - - - - NULL UBE3A 7337 genome.wustl.edu 37 15 25615955 25615955 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000462.2 -1 reviewed p.E459* 1.000 56 0% 75 41.3% 0 - - - - NULL UBE3A 7337 genome.wustl.edu 37 15 25616215 25616215 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000462.2 -1 reviewed p.S372L 1.000 57 1.8% 106 50% 3 66.6% benign(0.004) tolerated(0.13) neutral(0.253) NULL ATP10A 57194 genome.wustl.edu 37 15 25932873 25932873 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024490.3 -1 reviewed p.L1090M 1.000 35 0% 92 38% 1 0% probably_damaging(0.988) tolerated(0.07) deleterious(0.756) NULL GABRB3 2562 genome.wustl.edu 37 15 26812851 26812851 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000814.4 -1 reviewed p.R238W 1.000 44 0% 112 41.1% 0 - benign(0.036) deleterious(0.01) neutral(0.408) HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like GABRA5 2558 genome.wustl.edu 37 15 27182355 27182355 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000810.3 +1 reviewed p.V202I 0.429 24 0% 119 37.8% 0 - benign(0.001) tolerated(0.93) - HMMPfam_Neur_chan_LBD,superfamily_Neur_chan_LBD HERC2 8924 genome.wustl.edu 37 15 28377898 28377898 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004667.4 -1 reviewed p.S4103 1.000 7 0.000 25 0.440 14 35.7% - - - HMMPfam_RCC1,superfamily_RCC1/BLIP-II TRPM1 4308 genome.wustl.edu 37 15 31294124 31294124 + Silent SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002420.4 -1 reviewed p.G1571 0.847 48 0% 163 42.3% 0 - - - - NULL RYR3 6263 genome.wustl.edu 37 15 34015064 34015064 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001036.3 +1 validated p.L2256 0.006 15 0% 39 51.3% 0 - - - - NULL RYR3 6263 genome.wustl.edu 37 15 34094094 34094094 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001036.3 +1 validated p.F3315V 1.000 136 0% 188 39.4% 0 - possibly_damaging(0.677) - - NULL C15orf29 79768 genome.wustl.edu 37 15 34438978 34438978 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024713.2 -1 validated p.E258* 1.000 127 0% 263 36.1% 11 18.1% - - - NULL AQR 9716 genome.wustl.edu 37 15 35222475 35222475 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014691.2 -1 validated p.R333I 1.000 106 0% 233 37.3% 0 - possibly_damaging(0.901) deleterious(0.01) deleterious(0.762) NULL ENSG00000248276 0 genome.wustl.edu 37 15 35377370 35377370 + RNA SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000514460 +1 known NULL 0.004 22 0% 45 31.1% 1 100% - - - - INO80 54617 genome.wustl.edu 37 15 41387832 41387832 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_017553.1 -1 reviewed p.F116 1.000 145 0% 249 41.8% 0 - - - - NULL EXD1 161829 genome.wustl.edu 37 15 41488137 41488137 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152596.2 -1 provisional p.I153M 1.000 83 0% 151 42.4% 0 - probably_damaging(0.993) deleterious(0) deleterious(0.895) HMMPfam_3_5_exonuc,HMMSmart_SM00474,superfamily_Ribonuclease H-like MGA 23269 genome.wustl.edu 37 15 42042457 42042457 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001080541.2 +1 validated p.E2267* 0.992 82 0% 146 44.5% 2 100% - - - NULL GANC 2595 genome.wustl.edu 37 15 42635350 42635350 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_198141.2 +1 reviewed p.E743* 1.000 52 0% 204 34.8% 0 - - - - HMMPfam_Glyco_hydro_31 MAP1A 4130 genome.wustl.edu 37 15 43818002 43818002 + Missense_Mutation SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002373.5 +1 reviewed p.E1444G 0.023 71 0% 100 35% 1 100% benign(0.001) tolerated(0.21) neutral(0.044) NULL SPG11 80208 genome.wustl.edu 37 15 44912539 44912539 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_025137.3 -1 reviewed p.N895H 0.387 78 0% 247 40.9% 4 75% possibly_damaging(0.845) tolerated(0.09) deleterious(0.621) NULL SEMA6D 80031 genome.wustl.edu 37 15 48053623 48053623 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_153618.1 +1 reviewed p.Y148D 1.000 64 0% 89 29.2% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain SEMA6D 80031 genome.wustl.edu 37 15 48055253 48055253 + Silent SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_153618.1 +1 reviewed p.V233 1.000 75 0% 110 43.6% 0 - - - - HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain SLC24A5 283652 genome.wustl.edu 37 15 48428985 48428985 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_205850.2 +1 reviewed p.C232 0.558 72 0% 139 38.1% 1 0% - - - NULL FBN1 2200 genome.wustl.edu 37 15 48720669 48720669 + Splice_Site SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000138.4 -1 reviewed e56-1 1.000 28 0% 85 36.5% 0 - - - - - SECISBP2L 9728 genome.wustl.edu 37 15 49284839 49284839 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014701.2 -1 provisional p.D925N 1.000 55 0% 123 43.9% 7 57.1% possibly_damaging(0.647) tolerated(0.07) deleterious(0.546) NULL MYO5A 4644 genome.wustl.edu 37 15 52675325 52675325 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000259.3 -1 reviewed p.R659C 1.000 47 0% 155 40.6% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases UNC13C 440279 genome.wustl.edu 37 15 54817777 54817777 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001080534.1 +1 provisional p.E1830* 1.000 39 0% 181 37% 0 - - - - HMMPfam_DUF1041 PYGO1 26108 genome.wustl.edu 37 15 55838847 55838847 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015617.1 -1 provisional p.F212V 0.995 61 0% 112 39.3% 0 - possibly_damaging(0.832) tolerated(0.07) deleterious(0.636) NULL PRTG 283659 genome.wustl.edu 37 15 55964683 55964683 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_173814.4 -1 validated p.F667L 0.854 17 0% 84 44% 0 - benign(0) tolerated(1) - HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like MNS1 55329 genome.wustl.edu 37 15 56726591 56726591 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018365.2 -1 reviewed p.E338D 1.000 318 0% 487 37.2% 29 48.2% benign(0.055) tolerated(0.37) neutral(0.022) NULL AQP9 366 genome.wustl.edu 37 15 58467217 58467217 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020980.3 +1 reviewed p.A159 0.001 20 0% 134 45.5% 0 - - - - HMMPfam_MIP,superfamily_Aquaporin-like ADPGK 83440 genome.wustl.edu 37 15 73044515 73044515 + RNA SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NR_023318.1 -1 validated NULL 0.000 7 0.000 21 0.333 27 44.4% - - - - CCDC33 80125 genome.wustl.edu 37 15 74627405 74627405 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000321374 +1 known p.E331K 0.000 29 0% 77 39% 30 56.6% - - - NULL PSTPIP1 9051 genome.wustl.edu 37 15 77329488 77329488 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003978.3 +1 reviewed p.V408I 1.000 34 0% 79 38% 4 0% probably_damaging(0.998) tolerated(0.11) deleterious(0.746) HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain ARNT2 9915 genome.wustl.edu 37 15 80750308 80750308 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014862.3 +1 reviewed p.K62T 1.000 170 0.6% 347 42.4% 1 100% probably_damaging(0.985) deleterious(0) deleterious(0.877) superfamily_HLH helix-loop-helix DNA-binding domain TM6SF1 53346 genome.wustl.edu 37 15 83788338 83788338 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_023003.3 +1 validated p.P101 0.191 64 0% 309 33% 2 0% - - - NULL ACAN 176 genome.wustl.edu 37 15 89401939 89401939 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_013227.3 +1 reviewed p.F1926 0.000 19 0% 42 38.1% 0 - - - - NULL ACAN 176 genome.wustl.edu 37 15 89402123 89402123 + Missense_Mutation SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_013227.3 +1 reviewed p.T1988A 0.001 18 0% 48 35.4% 0 - possibly_damaging(0.663) tolerated(0.13) deleterious(0.487) NULL RLBP1 6017 genome.wustl.edu 37 15 89753603 89753603 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000326.4 -1 reviewed p.F289 0.948 25 0% 66 13.6% 0 - - - - HMMPfam_CRAL_TRIO,HMMSmart_SM00516,superfamily_CRAL/TRIO domain C15orf42 90381 genome.wustl.edu 37 15 90144551 90144551 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152259.3 +1 validated p.R726C 1.000 83 0% 198 45.5% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) NULL VPS33B 26276 genome.wustl.edu 37 15 91544668 91544668 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018668.3 -1 reviewed p.S477F 1.000 33 0% 101 43.6% 14 21.4% probably_damaging(0.99) deleterious(0) deleterious(0.886) HMMPfam_Sec1,superfamily_Sec1/munc18-like (SM) proteins IGF1R 3480 genome.wustl.edu 37 15 99452043 99452043 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000875.3 +1 reviewed p.I459M 1.000 48 0% 100 36% 7 57.1% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Recep_L_domain,superfamily_SSF52058 SYNM 23336 genome.wustl.edu 37 15 99670080 99670080 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_145728.2 +1 reviewed p.R505Q 0.001 50 0% 68 35.3% 0 - - - - NULL LYSMD4 145748 genome.wustl.edu 37 15 100269825 100269825 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152449.2 -1 validated p.E133* 0.946 20 0% 66 36.4% 2 50% - - - NULL TPSD1 23430 genome.wustl.edu 37 16 1306673 1306673 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_012217.2 +1 reviewed p.A80V 0.577 15 0% 49 44.9% 0 - benign(0.097) deleterious(0.01) neutral(0.413) HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases,PatternScan_TRYPSIN_HIS BAIAP3 8938 genome.wustl.edu 37 16 1394064 1394064 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003933.3 +1 reviewed p.F511 0.174 15 0% 22 22.7% 63 61.9% - - - NULL C16orf73 254528 genome.wustl.edu 37 16 1894965 1894965 + Splice_Site SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152764.2 -1 validated e9-1 1.000 100 0% 204 34.3% 0 - - - - - PKMYT1 9088 genome.wustl.edu 37 16 3026882 3026882 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004203.3 -1 reviewed p.P54L 1.000 14 0% 21 33.3% 2 0% benign(0.014) tolerated(0.4) neutral(0.017) NULL CREBBP 1387 genome.wustl.edu 37 16 3788637 3788637 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004380.2 -1 reviewed p.F1439L 1.000 79 0% 136 41.2% 10 60% unknown(0) deleterious(0.01) - HMMPfam_DUF906 PPL 5493 genome.wustl.edu 37 16 4943267 4943267 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002705.4 -1 reviewed p.L533M 0.999 5 0.000 9 0.556 9 22.2% probably_damaging(1) deleterious(0.02) deleterious(0.883) HMMSmart_SM00150,superfamily_Spectrin repeat TXNDC11 51061 genome.wustl.edu 37 16 11815454 11815454 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015914.5 -1 provisional p.A258T 1.000 100 0% 141 40.4% 19 63.1% probably_damaging(0.999) deleterious(0.01) deleterious(0.896) NULL SNX29 92017 genome.wustl.edu 37 16 12146077 12146077 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_032167.2 +1 validated p.E374D 1.000 30 0% 51 35.3% 6 0% benign(0.001) tolerated(0.28) neutral(0.032) NULL MYH11 4629 genome.wustl.edu 37 16 15854402 15854402 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001040114.1 -1 reviewed p.E422* 1.000 63 0% 233 39.5% 1 0% - - - HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540 XYLT1 64131 genome.wustl.edu 37 16 17221629 17221629 + Missense_Mutation SNP T T A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_022166.3 -1 reviewed p.N706I 1.000 23 0% 96 42.7% 0 - probably_damaging(0.991) tolerated(0.06) deleterious(0.766) NULL DNAH3 55567 genome.wustl.edu 37 16 20996939 20996939 + Silent SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_017539.1 -1 provisional p.I2375 0.228 25 0% 84 44% 0 - - - - superfamily_P-loop containing nucleoside triphosphate hydrolases ENSG00000217794 0 genome.wustl.edu 37 16 21559305 21559305 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000403120 -1 known p.S48Y 0.994 97 0% 324 18.5% 0 - - - - HMMPfam_Carb_anhydrase,superfamily_Carbonic anhydrase TNRC6A 27327 genome.wustl.edu 37 16 24762107 24762107 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014494.2 +1 reviewed p.K38N 1.000 124 0% 197 42.6% 0 - possibly_damaging(0.85) deleterious(0) deleterious(0.772) NULL SPN 6693 genome.wustl.edu 37 16 29675430 29675430 + Silent SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001030288.1 +1 validated p.S127 0.000 36 0% 98 42.9% 1 0% - - - NULL ITGAD 3681 genome.wustl.edu 37 16 31427911 31427911 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005353.2 +1 validated p.V815M 0.000 23 0% 41 46.3% 0 - benign(0.001) tolerated(0.06) neutral(0.323) HMMPfam_Integrin_alpha2,superfamily_Integrin domains ZNF267 10308 genome.wustl.edu 37 16 31927273 31927273 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003414.4 +1 validated p.R568Q 0.999 83 1.2% 127 37% 9 55.5% probably_damaging(0.991) tolerated(0.11) deleterious(0.716) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers CHD9 80205 genome.wustl.edu 37 16 53191165 53191165 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_025134.4 +1 validated p.E388D 0.997 26 0% 53 49.1% 1 0% benign(0.008) tolerated(0.46) neutral(0.012) NULL NUP93 9688 genome.wustl.edu 37 16 56864530 56864530 + Nonsense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014669.3 +1 validated p.R340* 1.000 19 0% 76 40.8% 15 0% - - - HMMPfam_Nic96 NUP93 9688 genome.wustl.edu 37 16 56865847 56865847 + Silent SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014669.3 +1 validated p.I393 1.000 27 0% 71 42.3% 13 100% - - - HMMPfam_Nic96 CNOT1 23019 genome.wustl.edu 37 16 58573715 58573715 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_016284.3 -1 validated p.R1650Q 1.000 37 0% 98 33.7% 15 46.6% probably_damaging(0.999) deleterious(0.02) deleterious(0.873) NULL CDH8 1006 genome.wustl.edu 37 16 61761129 61761129 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000394178 -1 known p.L371I 1.000 25 0% 53 41.5% 0 - - - - HMMSmart_CA,superfamily_Cadherin CDH11 1009 genome.wustl.edu 37 16 65016136 65016136 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001797.2 -1 reviewed p.P356 0.005 21 0% 61 37.7% 19 42.1% - - - HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like PLEKHG4 25894 genome.wustl.edu 37 16 67314896 67314896 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001129727.1 +1 reviewed p.R236Q 0.037 19 0% 46 32.6% 0 - benign(0.072) tolerated(0.45) neutral(0.017) NULL RANBP10 57610 genome.wustl.edu 37 16 67763713 67763713 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020850.1 -1 provisional p.E339D 1.000 32 0% 69 49.3% 7 28.5% probably_damaging(0.983) deleterious(0) deleterious(0.873) HMMSmart_CTLH ESRP2 80004 genome.wustl.edu 37 16 68267742 68267742 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024939.2 -1 validated p.R162Q 1.000 31 0% 69 49.3% 7 42.8% probably_damaging(0.998) deleterious(0) deleterious(0.919) NULL SLC7A6 9057 genome.wustl.edu 37 16 68321725 68321725 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001076785.1 +1 validated p.V200 1.000 53 0% 99 40.4% 1 0% - - - HMMPfam_AA_permease PDXDC2P 283970 genome.wustl.edu 37 16 70076295 70076295 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000325845 -1 known p.K40N 1.000 26 0% 44 38.6% 3 66.6% - - - superfamily_PLP-dependent transferases ZFHX3 463 genome.wustl.edu 37 16 72827580 72827580 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006885.3 -1 reviewed p.E3001* 1.000 31 0% 141 34.8% 6 66.6% - - - HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like ZFHX3 463 genome.wustl.edu 37 16 72829616 72829616 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006885.3 -1 reviewed p.R2322Q 1.000 30 0% 81 42% 4 25% unknown(0) - - superfamily_C2H2 and C2HC zinc fingers ZFHX3 463 genome.wustl.edu 37 16 72993099 72993099 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006885.3 -1 reviewed p.I316L 0.993 21 0% 73 34.2% 2 50% unknown(0) - - NULL CLEC18B 497190 genome.wustl.edu 37 16 74447527 74447527 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001011880.2 -1 validated p.C168 0.642 89 0% 364 15.7% 0 - - - - HMMSmart_SM00198,HMMPfam_SCP,superfamily_PR-1-like ADAMTS18 170692 genome.wustl.edu 37 16 77317874 77317874 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_199355.2 -1 reviewed p.K1215N 0.998 49 0% 95 42.1% 0 - benign(0.061) tolerated(0.16) neutral(0.064) HMMPfam_PLAC GAN 8139 genome.wustl.edu 37 16 81391484 81391484 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_022041.3 +1 reviewed p.I307 0.749 21 0% 112 40.2% 0 - - - - HMMSmart_Kelch,superfamily_Gal_oxid_central USP10 9100 genome.wustl.edu 37 16 84778270 84778270 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000441926 +1 known p.S41L 0.944 43 0% 113 40.7% 14 14.2% unknown(0) tolerated(0.13) - NULL ZDHHC7 55625 genome.wustl.edu 37 16 85012880 85012880 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001145548.1 -1 validated p.R188I 0.999 74 0% 209 45.9% 15 33.3% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_zf-DHHC ANKFY1 51479 genome.wustl.edu 37 17 4085589 4085589 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_016376.3 -1 validated p.V671I 1.000 10 0% 40 37.5% 3 100% probably_damaging(0.987) deleterious(0) deleterious(0.881) HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK PELP1 27043 genome.wustl.edu 37 17 4578776 4578776 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000301396 -1 known p.R461K 0.026 27 0% 20 35% 1 0% unknown(0) tolerated(1) - NULL SLC13A5 284111 genome.wustl.edu 37 17 6599003 6599003 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000381074 -1 known p.R307 0.005 17 0% 37 40.5% 0 - - - - NULL RNASEK 440400 genome.wustl.edu 37 17 6917483 6917483 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001004333.3 +1 validated p.Y59D 1.000 17 0% 58 36.2% 840 48% probably_damaging(0.998) tolerated(0.93) deleterious(0.474) NULL PHF23 79142 genome.wustl.edu 37 17 7140748 7140748 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024297.2 -1 validated p.S39R 1.000 64 0% 120 33.3% 37 45.9% benign(0.278) deleterious(0) deleterious(0.475) NULL YBX2 51087 genome.wustl.edu 37 17 7193024 7193024 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015982.3 -1 validated p.R290H 1.000 18 0% 31 38.7% 0 - benign(0.064) deleterious(0.02) neutral(0.387) NULL SPDYE4 388333 genome.wustl.edu 37 17 8656734 8656734 + Missense_Mutation SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001128076.1 -1 provisional p.N187D 0.001 23 0% 105 44.8% 0 - benign(0) tolerated(0.36) neutral(0.020) NULL PIK3R5 23533 genome.wustl.edu 37 17 8788038 8788038 + Missense_Mutation SNP T T A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001142633.1 -1 validated p.I731F 1.000 36 0% 34 32.4% 0 - probably_damaging(0.995) deleterious(0.02) deleterious(0.841) HMMPfam_PI3K_1B_p101 ARHGAP44 9912 genome.wustl.edu 37 17 12859200 12859200 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014859.4 +1 validated p.L385V 1.000 110 0% 180 35.6% 2 0% probably_damaging(0.998) deleterious(0) deleterious(0.919) HMMPfam_RhoGAP,HMMSmart_RhoGAP,superfamily_Rho_GAP TEKT3 64518 genome.wustl.edu 37 17 15234553 15234553 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_031898.2 -1 reviewed p.S117L 0.997 125 0.8% 357 32.5% 0 - possibly_damaging(0.594) deleterious(0.01) deleterious(0.611) HMMPfam_Tektin CDRT4 284040 genome.wustl.edu 37 17 15341372 15341372 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_173622.3 -1 validated p.E58D 0.148 38 0% 132 29.5% 14 64.2% benign(0.105) deleterious(0) neutral(0.453) NULL ZNF286A 57335 genome.wustl.edu 37 17 15620327 15620327 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001130842.1 +1 validated p.R430I 1.000 130 0% 243 44% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 TRPV2 51393 genome.wustl.edu 37 17 16327045 16327045 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000455666 +1 known p.A254T 0.013 14 0% 22 31.8% 5 60% - - - superfamily_Ankyrin repeat FLCN 201163 genome.wustl.edu 37 17 17117129 17117129 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_144997.5 -1 reviewed p.R527Q 1.000 58 0% 160 38.8% 23 43.4% probably_damaging(0.999) deleterious(0.05) deleterious(0.836) NULL TOM1L2 146691 genome.wustl.edu 37 17 17766126 17766126 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001082968.1 -1 validated p.S374* 1.000 34 0% 102 31.4% 3 33.3% - - - NULL ZNF286B 729288 genome.wustl.edu 37 17 18565527 18565527 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001145045.1 -1 validated p.R431I 1.000 172 0% 279 48% 0 - - - - HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers DHRS7B 25979 genome.wustl.edu 37 17 21094344 21094344 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015510.3 +1 validated p.D286Y 1.000 43 0% 181 40.9% 205 44.8% probably_damaging(0.976) deleterious(0) deleterious(0.863) superfamily_NAD(P)-bd SSH2 85464 genome.wustl.edu 37 17 27959123 27959123 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_033389.2 -1 reviewed p.L1003R 0.000 40 0% 111 35.1% 2 100% benign(0.133) deleterious(0) neutral(0.456) NULL BLMH 642 genome.wustl.edu 37 17 28576142 28576142 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000386.2 -1 reviewed p.E421K 1.000 33 0% 84 38.1% 40 60% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Peptidase_C1_2,superfamily_Cysteine proteinases ATAD5 79915 genome.wustl.edu 37 17 29167781 29167781 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024857.3 +1 provisional p.K741N 0.019 45 0% 62 38.7% 0 - benign(0.255) tolerated(0.12) neutral(0.287) NULL RAB11FIP4 84440 genome.wustl.edu 37 17 29855653 29855653 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_032932.3 +1 validated p.R504W 1.000 14 0% 27 48.1% 32 37.5% probably_damaging(1) deleterious(0.01) deleterious(0.905) NULL RHOT1 55288 genome.wustl.edu 37 17 30526015 30526015 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001033568.1 +1 validated p.L307V 1.000 74 0% 168 46.4% 9 55.5% benign(0.221) tolerated(0.06) neutral(0.345) superfamily_SSF47473 ENSG00000226049 0 genome.wustl.edu 37 17 32365873 32365873 + Silent SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000430493 -1 known p.K282 1.000 106 0% 166 33.7% 1 0% - - - NULL SLFN12L 100506736 genome.wustl.edu 37 17 33806325 33806325 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001145027.1 -1 validated p.N331H 0.001 94 0% 212 47.2% 0 - probably_damaging(0.991) tolerated(0.12) deleterious(0.705) HMMPfam_AAA_4 PIGW 284098 genome.wustl.edu 37 17 34893298 34893298 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_178517.3 +1 validated p.F116L 1.000 74 0% 274 41.2% 5 40% benign(0.157) tolerated(0.66) neutral(0.017) NULL GPR179 440435 genome.wustl.edu 37 17 36483731 36483731 + Silent SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001004334.2 -1 validated p.S1907 0.016 29 0% 123 40.7% 0 - - - - NULL MSL1 339287 genome.wustl.edu 37 17 38285497 38285497 + Splice_Site SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001012241.1 +1 validated e2-1 1.000 24 0% 59 39% 0 - - - - - MSL1 339287 genome.wustl.edu 37 17 38289853 38289853 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001012241.1 +1 validated p.K278N 1.000 78 0% 136 31.6% 6 33.3% probably_damaging(0.958) deleterious(0.02) deleterious(0.784) NULL KRT26 353288 genome.wustl.edu 37 17 38927477 38927477 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_181539.4 -1 reviewed p.A151 0.004 23 0% 87 41.4% 0 - - - - HMMPfam_Filament BRCA1 672 genome.wustl.edu 37 17 41245921 41245921 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_007294.3 -1 reviewed p.G543C 0.000 69 0% 165 38.8% 0 - benign(0.015) deleterious(0.05) neutral(0.346) NULL KANSL1 284058 genome.wustl.edu 37 17 44248500 44248500 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015443.2 -1 validated p.S337Y 1.000 35 0% 63 38.1% 4 0% possibly_damaging(0.931) tolerated(0.06) deleterious(0.700) NULL C17orf57 124989 genome.wustl.edu 37 17 45422455 45422455 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152347.3 +1 provisional p.E170* 0.948 115 0% 180 45% 0 - - - - superfamily_EF-hand LUC7L3 51747 genome.wustl.edu 37 17 48818516 48818516 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006107.3 +1 reviewed p.R87Q 1.000 50 0% 182 39% 24 33.3% possibly_damaging(0.827) tolerated(0.18) neutral(0.370) HMMPfam_LUC7 ANKFN1 162282 genome.wustl.edu 37 17 54517705 54517705 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_153228.2 +1 validated p.E313K 0.994 22 0% 79 32.9% 1 0% benign(0) tolerated(0.75) neutral(0.002) HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III SEPT4 5414 genome.wustl.edu 37 17 56599408 56599408 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004574.2 -1 reviewed p.D239 0.968 45 0% 186 41.4% 4 0% - - - HMMPfam_Septin,superfamily_P-loop containing nucleoside triphosphate hydrolases GDPD1 284161 genome.wustl.edu 37 17 57298000 57298000 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_182569.3 +1 validated p.L10 1.000 29 0% 95 22.1% 1 100% - - - NULL EFCAB3 146779 genome.wustl.edu 37 17 60469295 60469295 + Silent SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001144933.1 +1 validated p.V140 0.711 49 0% 216 35.2% 0 - - - - superfamily_EF-hand TACO1 51204 genome.wustl.edu 37 17 61685164 61685164 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_016360.3 +1 reviewed p.F232L 1.000 22 0% 71 43.7% 62 41.9% probably_damaging(0.998) tolerated(0.08) deleterious(0.774) HMMPfam_DUF28,superfamily_YebC-like DDX5 1655 genome.wustl.edu 37 17 62496309 62496309 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004396.3 -1 validated p.F526C 1.000 26 0% 95 42.1% 449 49.6% possibly_damaging(0.845) tolerated(0.11) deleterious(0.596) HMMPfam_P68HR ENSG00000232457 0 genome.wustl.edu 37 17 62950392 62950392 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000413214 +1 known p.L51V 0.996 32 0% 81 25.9% 0 - probably_damaging(0.979) tolerated(0.18) deleterious(0.478) HMMPfam_MFS_1,superfamily_MFS general substrate transporter AXIN2 8313 genome.wustl.edu 37 17 63554452 63554452 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004655.3 -1 reviewed p.R96Q 1.000 33 0% 106 45.3% 2 50% probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMPfam_RGS,HMMSmart_SM00315,superfamily_Regulator of G-protein signaling RGS CEP112 201134 genome.wustl.edu 37 17 64172962 64172962 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_145036.3 -1 validated p.L95I 0.005 38 0% 190 31.6% 3 100% probably_damaging(1) deleterious(0) deleterious(0.945) NULL PSMD12 5718 genome.wustl.edu 37 17 65337060 65337060 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002816.3 -1 reviewed p.L424V 1.000 104 0% 223 48.4% 35 51.4% benign(0) tolerated(1) - HMMSmart_PINT,superfamily_SSF46785 ABCA6 23460 genome.wustl.edu 37 17 67101693 67101693 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_080284.2 -1 reviewed p.D884N 0.000 120 0% 124 41.1% 0 - benign(0.01) tolerated(0.28) neutral(0.032) NULL ABCA5 23461 genome.wustl.edu 37 17 67298987 67298987 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018672.3 -1 reviewed p.E331* 1.000 47 0% 55 36.4% 1 100% - - - NULL C17orf80 55028 genome.wustl.edu 37 17 71232108 71232108 + Nonsense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_017941.4 +1 validated p.R163* 0.000 54 0% 88 35.2% 1 0% - - - NULL ITGB4 3691 genome.wustl.edu 37 17 73753142 73753142 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000213.3 +1 reviewed p.F1724 0.314 11 0% 29 34.5% 476 52.3% - - - HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III CDK3 1018 genome.wustl.edu 37 17 73997591 73997591 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001258.2 +1 validated p.L29 1.000 27 0% 67 43.3% 6 16.6% - - - HMMSmart_S_TKc,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase PGS1 9489 genome.wustl.edu 37 17 76399861 76399861 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024419.3 +1 provisional p.D365N 1.000 27 0% 55 41.8% 14 57.1% probably_damaging(1) deleterious(0) deleterious(0.945) NULL USP36 57602 genome.wustl.edu 37 17 76832320 76832320 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_025090.3 -1 validated p.F42 0.827 84 0% 104 41.3% 0 - - - - NULL ENGASE 64772 genome.wustl.edu 37 17 77073544 77073544 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001042573.1 +1 validated p.R60Q 0.569 81 1.2% 175 37.7% 2 0% possibly_damaging(0.805) tolerated(0.05) deleterious(0.648) NULL YES1 7525 genome.wustl.edu 37 18 751726 751726 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005433.3 -1 reviewed p.R117I 1.000 204 0% 265 40% 2 100% benign(0.012) tolerated(0.28) neutral(0.032) HMMPfam_SH3_1,HMMSmart_SH3,superfamily_SH3 ZFP161 7541 genome.wustl.edu 37 18 5292173 5292173 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001143823.1 -1 validated p.K12Q 1.000 27 0% 49 42.9% 4 75% probably_damaging(0.997) deleterious(0.01) deleterious(0.872) superfamily_BTB/POZ_fold EPB41L3 23136 genome.wustl.edu 37 18 5433921 5433921 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_012307.2 -1 provisional p.E269K 1.000 66 0% 287 41.1% 0 - possibly_damaging(0.786) deleterious(0.03) deleterious(0.659) HMMPfam_FERM_M,superfamily_Second domain of FERM,HMMSmart_SM00295 PTPRM 5797 genome.wustl.edu 37 18 8069731 8069731 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001105244.1 +1 reviewed p.R394W 1.000 42 0% 77 37.7% 0 - benign(0.048) deleterious(0) neutral(0.448) HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III SOGA2 23255 genome.wustl.edu 37 18 8718434 8718434 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000456698 +1 known p.E356* 1.000 41 0% 92 44.6% 0 - - - - NULL ANKRD12 23253 genome.wustl.edu 37 18 9281074 9281074 + Missense_Mutation SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015208.3 +1 validated p.Y2047H 1.000 22 0% 97 39.2% 9 77.7% probably_damaging(0.998) tolerated(0.11) deleterious(0.746) superfamily_Ankyrin repeat TXNDC2 84203 genome.wustl.edu 37 18 9887154 9887154 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001098529.1 +1 validated p.K226N 0.000 104 0% 225 38.2% 0 - - - - NULL ANKRD30B 374860 genome.wustl.edu 37 18 14797804 14797804 + Silent SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001145029.1 +1 validated p.S660 0.002 383 0% 489 36.4% 0 - - - - NULL ESCO1 114799 genome.wustl.edu 37 18 19154028 19154028 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_052911.2 -1 validated p.K259N 0.175 55 0% 141 39% 3 33.3% benign(0.411) deleterious(0.01) deleterious(0.538) NULL MIR1-2 406905 genome.wustl.edu 37 18 19409028 19409028 + RNA SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000384961 -1 known NULL 1.000 72 0% 175 50.3% 0 - - - - - TAF4B 6875 genome.wustl.edu 37 18 23895277 23895277 + Silent SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005640.1 +1 validated p.S639 1.000 31 0% 103 36.9% 3 66.6% - - - HMMPfam_TAF4 DSG1 1828 genome.wustl.edu 37 18 28919913 28919913 + Missense_Mutation SNP G G T rs34302455 byCluster;byFrequency;by1000genomes TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001942.2 +1 reviewed p.D538Y 0.000 51 0% 75 32% 0 - benign(0) deleterious(0.04) neutral(0.349) NULL DSG3 1830 genome.wustl.edu 37 18 29041236 29041236 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001944.2 +1 reviewed p.R287Q 0.918 69 0% 153 38.6% 0 - probably_damaging(0.999) tolerated(0.23) deleterious(0.532) HMMPfam_Cadherin,superfamily_Cadherin DSG3 1830 genome.wustl.edu 37 18 29056170 29056170 + Nonsense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001944.2 +1 reviewed p.R983* 0.000 17 0% 64 32.8% 0 - - - - NULL ASXL3 80816 genome.wustl.edu 37 18 31187633 31187633 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_030632.1 +1 provisional p.E44* 1.000 82 0% 68 39.7% 0 - - - - NULL RPRD1A 55197 genome.wustl.edu 37 18 33610844 33610844 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018170.3 -1 provisional p.R138Q 1.000 79 0% 324 39.2% 9 55.5% probably_damaging(0.971) tolerated(0.28) neutral(0.445) superfamily_ENTH/VHS domain SLC39A6 25800 genome.wustl.edu 37 18 33689610 33689610 + Silent SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_012319.3 -1 validated p.I738 0.993 99 0% 119 37% 19 52.6% - - - HMMPfam_Zip EPG5 57724 genome.wustl.edu 37 18 43467725 43467725 + Silent SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020964.2 -1 validated p.I1700 1.000 45 0% 98 34.7% 1 0% - - - NULL CCDC11 220136 genome.wustl.edu 37 18 47787603 47787603 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_145020.3 -1 validated p.R102C 1.000 202 0% 225 40% 6 16.6% probably_damaging(1) deleterious(0.01) deleterious(0.905) NULL MBD1 4152 genome.wustl.edu 37 18 47800597 47800597 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015846.3 -1 reviewed p.R369C 1.000 38 0% 23 43.5% 15 40% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_zf-CXXC POLI 11201 genome.wustl.edu 37 18 51795958 51795960 + In_Frame_Del DEL CGA CGA - rs10584411 byCluster;by1000genomes TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 CGA CGA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_007195.2 +1 validated p.D17in_frame_del 0.000:0.000:0.000 - - - - - - - - - NULL CCDC68 80323 genome.wustl.edu 37 18 52585187 52585187 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001143829.1 -1 validated p.R277I 0.990 162 0% 294 41.8% 0 - possibly_damaging(0.538) tolerated(0.65) neutral(0.185) NULL WDR7 23335 genome.wustl.edu 37 18 54424511 54424511 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015285.2 +1 reviewed p.S896Y 1.000 23 0% 53 52.8% 1 0% probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL CDH7 1005 genome.wustl.edu 37 18 63492035 63492035 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004361.2 +1 reviewed p.E317* 1.000 66 0% 203 35.5% 0 - - - - HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like ZNF407 55628 genome.wustl.edu 37 18 72343485 72343485 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_017757.2 +1 reviewed p.P170 0.001 40 0% 99 40.4% 0 - - - - NULL ADNP2 22850 genome.wustl.edu 37 18 77894088 77894088 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014913.3 +1 validated p.T264 0.984 27 0% 40 45% 4 0% - - - NULL ATP8B3 148229 genome.wustl.edu 37 19 1783264 1783264 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_138813.2 -1 reviewed p.E1222D 0.001 16 0% 40 37.5% 2 0% benign(0.073) tolerated(0.6) neutral(0.009) NULL TLE2 7089 genome.wustl.edu 37 19 3002502 3002502 + Splice_Site SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003260.4 -1 validated e18-1 1.000 15 0% 48 37.5% 1 100% - - - - CHAF1A 10036 genome.wustl.edu 37 19 4418031 4418031 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005483.2 +1 validated p.F325 0.027 99 0% 239 48.5% 6 50% - - - NULL DPP9 91039 genome.wustl.edu 37 19 4679903 4679903 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_139159.4 -1 reviewed p.H844Y 1.000 42 0% 172 32% 33 42.4% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Peptidase_S9,superfamily_SSF53474 SAFB 6294 genome.wustl.edu 37 19 5654384 5654384 + Nonsense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002967.2 +1 reviewed p.R558* 0.493 66 1.5% 172 36% 48 10.4% - - - superfamily_SSF54928 DUS3L 56931 genome.wustl.edu 37 19 5790085 5790085 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020175.2 -1 validated p.K120N 0.873 26 0% 103 39.8% 11 72.7% benign(0.008) tolerated(0.4) neutral(0.016) HMMPfam_zf-CCCH,superfamily_CCCH zinc finger PNPLA6 10908 genome.wustl.edu 37 19 7625638 7625638 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006702.4 +1 reviewed p.S1230 1.000 32 0% 26 50% 110 47.2% - - - NULL XAB2 56949 genome.wustl.edu 37 19 7693137 7693137 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020196.2 -1 validated p.F33L 1.000 27 0% 56 41.1% 11 63.6% benign(0.008) tolerated(0.58) neutral(0.005) NULL C19orf59 199675 genome.wustl.edu 37 19 7742531 7742531 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_174918.2 +1 reviewed p.D35Y 0.411 46 0% 37 29.7% 0 - probably_damaging(0.991) deleterious(0.02) deleterious(0.827) NULL KANK3 256949 genome.wustl.edu 37 19 8389377 8389377 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_198471.2 -1 validated p.A780T 0.831 8 0.000 16 0.438 5 0% possibly_damaging(0.93) tolerated(0.13) deleterious(0.629) superfamily_ANK MUC16 94025 genome.wustl.edu 37 19 9068988 9068988 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024690.2 -1 validated p.K6153T 0.001 103 0% 33 48.5% 0 - unknown(0) - - NULL ZNF559 84527 genome.wustl.edu 37 19 9453497 9453497 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_032497.1 +1 provisional p.R457I 0.350 43 0% 92 43.5% 5 60% probably_damaging(1) tolerated(0.07) deleterious(0.819) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 EPOR 2057 genome.wustl.edu 37 19 11489375 11489375 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000121.3 -1 reviewed p.N303H 0.942 35 0% 73 42.5% 6 0% probably_damaging(1) deleterious(0.01) deleterious(0.905) NULL ZNF441 126068 genome.wustl.edu 37 19 11891286 11891286 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152355.2 +1 validated p.R216I 0.082 56 0% 194 43.3% 1 0% benign(0.041) tolerated(0.14) neutral(0.252) superfamily_C2H2 and C2HC zinc fingers ZNF441 126068 genome.wustl.edu 37 19 11891858 11891858 + Nonsense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152355.2 +1 validated p.R407* 0.000 77 0% 148 14.2% 0 - - - - HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers ZNF878 729747 genome.wustl.edu 37 19 12155560 12155560 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001080404.1 -1 inferred p.R266I 0.002 106 0% 291 41.9% 1 0% probably_damaging(0.993) tolerated(0.15) deleterious(0.691) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers ENSG00000188474 0 genome.wustl.edu 37 19 12223741 12223741 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000339302 +1 known p.S460F 0.000 15 0% 56 41.1% 2 50% benign(0.115) tolerated(0.65) neutral(0.012) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 ZNF20 7568 genome.wustl.edu 37 19 12244190 12244190 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_021143.2 -1 validated p.R271C 0.002 68 0% 168 38.1% 4 25% probably_damaging(1) deleterious(0.04) deleterious(0.849) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers ZNF442 79973 genome.wustl.edu 37 19 12461473 12461473 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_030824.2 -1 validated p.R309Q 0.000 99 0% 300 46% 1 100% benign(0.151) tolerated(0.51) neutral(0.022) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 ZNF709 163051 genome.wustl.edu 37 19 12575333 12575333 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152601.3 -1 validated p.R468I 0.000 85 0% 198 33.8% 1 100% possibly_damaging(0.894) tolerated(0.2) neutral(0.401) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers ZNF709 163051 genome.wustl.edu 37 19 12576177 12576177 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152601.3 -1 validated p.E187* 0.977 99 0% 192 41.7% 0 - - - - HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers MAST1 22983 genome.wustl.edu 37 19 12954346 12954346 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014975.2 +1 validated p.A84 0.990 13 0% 35 45.7% 0 - - - - HMMPfam_DUF1908 FARSA 2193 genome.wustl.edu 37 19 13035456 13035456 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004461.2 -1 validated p.L398M 1.000 15 0% 39 43.6% 142 45% probably_damaging(0.956) tolerated(0.88) neutral(0.400) HMMPfam_tRNA-synt_2d,superfamily_Class II aaRS and biotin synthetases OR7A10 390892 genome.wustl.edu 37 19 14951778 14951778 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001005190.1 -1 provisional p.F304L 0.000 43 0% 137 39.4% 0 - benign(0.001) tolerated(1) - superfamily_SSF81321 BRD4 23476 genome.wustl.edu 37 19 15350022 15350022 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_058243.2 -1 reviewed p.P1210 0.883 10 0% 42 38.1% 62 50% - - - NULL LOC646575 646575 genome.wustl.edu 37 19 15775169 15775169 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XM_002343630.1 +1 model p.F18 0.964 48 0% 156 33.3% 0 - - - - HMMPfam_p450,superfamily_Cytochrome P450 CYP4F12 66002 genome.wustl.edu 37 19 15795988 15795988 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_023944.2 +1 reviewed p.D366N 0.001 34 0% 118 37.3% 0 - possibly_damaging(0.594) deleterious(0) deleterious(0.649) HMMPfam_p450,superfamily_Cytochrome P450 CPAMD8 27151 genome.wustl.edu 37 19 17039896 17039896 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000443236 -1 known p.S1058L 0.973 19 0% 48 50% 30 36.6% - - - NULL B3GNT3 10331 genome.wustl.edu 37 19 17922728 17922728 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014256.3 +1 reviewed p.L306F 0.002 21 0% 35 37.1% 147 52.3% possibly_damaging(0.441) deleterious(0.03) deleterious(0.508) HMMPfam_Galactosyl_T RAB3A 5864 genome.wustl.edu 37 19 18308466 18308466 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002866.4 -1 validated p.F159 0.888 21 0% 70 32.9% 23 56.5% - - - HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases LRRC25 126364 genome.wustl.edu 37 19 18507667 18507667 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_145256.2 -1 validated p.A36V 0.000 18 0% 23 26.1% 2 50% benign(0) tolerated(0.3) neutral(0.029) NULL ARMC6 93436 genome.wustl.edu 37 19 19162549 19162549 + Missense_Mutation SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_033415.2 +1 reviewed p.Q108R 1.000 25 0% 28 32.1% 40 60% benign(0.15) tolerated(0.11) neutral(0.285) superfamily_ARM repeat ATP13A1 57130 genome.wustl.edu 37 19 19762514 19762514 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020410.2 -1 validated p.Q773H 1.000 51 0% 93 39.8% 81 38.2% possibly_damaging(0.795) tolerated(0.12) deleterious(0.559) superfamily_HAD-like ZNF14 7561 genome.wustl.edu 37 19 19822670 19822670 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_021030.2 -1 reviewed p.P474S 1.000 65 0% 111 39.6% 3 66.6% probably_damaging(1) deleterious(0.01) deleterious(0.905) superfamily_SSF57667 ZNF90 7643 genome.wustl.edu 37 19 20229025 20229025 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_007138.1 +1 validated p.R221I 0.996 110 0% 135 37.8% 0 - benign(0.001) tolerated(0.18) neutral(0.056) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 ZNF429 353088 genome.wustl.edu 37 19 21719853 21719853 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001001415.2 +1 provisional p.R333I 0.998 62 0% 67 44.8% 5 0% benign(0.079) tolerated(0.17) neutral(0.065) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 ZNF100 163227 genome.wustl.edu 37 19 21909963 21909963 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_173531.3 -1 validated p.R384Q 0.001 53 1.9% 90 41.1% 2 0% benign(0.01) tolerated(0.8) neutral(0.001) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers ZNF100 163227 genome.wustl.edu 37 19 21910440 21910440 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_173531.3 -1 validated p.R225I 0.794 133 0% 195 42.6% 0 - benign(0.001) tolerated(0.1) neutral(0.286) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers ZNF43 7594 genome.wustl.edu 37 19 21992001 21992001 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003423.2 -1 validated p.R280S 0.991 105 1% 110 44.5% 0 - possibly_damaging(0.688) deleterious(0) deleterious(0.691) superfamily_C2H2 and C2HC zinc fingers ZNF208 7757 genome.wustl.edu 37 19 22155698 22155698 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_007153.3 -1 provisional p.R613K 0.994 95 0% 121 32.2% 0 - benign(0.011) tolerated(1) neutral(0.001) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 ZNF257 113835 genome.wustl.edu 37 19 22271727 22271727 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_033468.2 +1 provisional p.R392I 1.000 76 0% 145 46.9% 0 - benign(0) tolerated(0.35) neutral(0.021) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers LOC100287226 100287226 genome.wustl.edu 37 19 22497215 22497215 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XM_002343636.1 +1 model p.F199L 0.000 42 0% 56 44.6% 0 - benign(0.119) tolerated(0.67) neutral(0.012) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers LOC100287226 100287226 genome.wustl.edu 37 19 22497853 22497853 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XM_002343636.1 +1 model p.K412T 0.004 37 0% 47 38.3% 0 - benign(0.294) tolerated(0.07) neutral(0.410) HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers ZNF98 148198 genome.wustl.edu 37 19 22575054 22575054 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001098626.1 -1 validated p.G328V 1.000 70 0% 105 30.5% 0 - possibly_damaging(0.946) deleterious(0) deleterious(0.835) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers ENSG00000235276 0 genome.wustl.edu 37 19 22782265 22782265 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000421840 +1 known p.R11I 0.949 24 0% 34 38.2% 0 - - - - NULL ZNF492 57615 genome.wustl.edu 37 19 22847240 22847240 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020855.2 +1 validated p.E257* 0.003 95 0% 123 22.8% 1 0% - - - HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 ANKRD27 84079 genome.wustl.edu 37 19 33119684 33119684 + Silent SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_032139.2 -1 validated p.V427 0.484 39 0% 189 39.7% 3 66.6% - - - superfamily_ANK ZNF302 55900 genome.wustl.edu 37 19 35175828 35175828 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001012320.1 +1 validated p.R296C 0.001 70 0% 103 36.9% 6 66.6% probably_damaging(1) tolerated(0.23) deleterious(0.541) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 FFAR3 2865 genome.wustl.edu 37 19 35850077 35850077 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005304.3 +1 validated p.F95L 1.000 93 0% 389 19.5% 0 - possibly_damaging(0.929) deleterious(0.03) deleterious(0.740) HMMPfam_7tm_1,superfamily_SSF81321 ZNF461 92283 genome.wustl.edu 37 19 37129946 37129946 + Missense_Mutation SNP A A C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_153257.2 -1 validated p.I434S 0.457 69 0% 152 36.8% 5 60% probably_damaging(0.992) deleterious(0.03) deleterious(0.812) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers ZNF461 92283 genome.wustl.edu 37 19 37130369 37130369 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_153257.2 -1 validated p.R293K 1.000 97 0% 214 38.3% 3 66.6% benign(0.001) tolerated(0.13) neutral(0.253) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers ZNF567 163081 genome.wustl.edu 37 19 37210426 37210426 + Missense_Mutation SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152603.2 +1 provisional p.V236A 0.905 39 0% 64 42.2% 3 33.3% possibly_damaging(0.596) tolerated(0.65) neutral(0.209) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 ZNF790 388536 genome.wustl.edu 37 19 37310530 37310530 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_206894.2 -1 validated p.S239L 0.001 77 0% 126 34.9% 0 - benign(0.202) deleterious(0.02) neutral(0.403) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers ZNF585B 92285 genome.wustl.edu 37 19 37676830 37676830 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152279.3 -1 validated p.L537I 0.070 90 0% 217 41.9% 5 20% probably_damaging(0.998) deleterious(0) deleterious(0.919) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 ZNF383 163087 genome.wustl.edu 37 19 37733380 37733380 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152604.1 +1 provisional p.S81L 0.983 32 0% 70 40% 2 100% benign(0.076) tolerated(0.11) neutral(0.277) NULL ZNF571 51276 genome.wustl.edu 37 19 38055708 38055708 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_016536.3 -1 validated p.R541H 0.001 74 0% 134 46.3% 0 - benign(0.037) tolerated(0.7) neutral(0.004) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 WDR87 83889 genome.wustl.edu 37 19 38384713 38384713 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_031951.3 -1 provisional p.V505I 0.000 19 0% 42 45.2% 0 - benign(0.091) - - superfamily_WD40 repeat-like SIPA1L3 23094 genome.wustl.edu 37 19 38692533 38692533 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015073.1 +1 validated p.N1672 0.303 25 0% 42 50% 28 57.1% - - - NULL FBXO17 115290 genome.wustl.edu 37 19 39439261 39439261 + Missense_Mutation SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_148169.1 -1 reviewed p.N145S 0.951 47 0% 66 31.8% 1 0% possibly_damaging(0.666) tolerated(0.35) neutral(0.257) HMMPfam_FBA,superfamily_Galactose-binding domain-like CYP2A6 1548 genome.wustl.edu 37 19 41350638 41350638 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000762.5 -1 reviewed p.D401Y 0.996 46 0% 162 35.2% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_p450,superfamily_Cytochrome P450 ENSG00000198251 0 genome.wustl.edu 37 19 41416527 41416527 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000359667 -1 known p.F25 0.997 17 0% 56 37.5% 0 - - - - HMMPfam_p450,superfamily_Cytochrome_P450 CYP2F1 1572 genome.wustl.edu 37 19 41627430 41627430 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000774.3 +1 reviewed p.F184 1.000 29 0% 65 44.6% 0 - - - - HMMPfam_p450,superfamily_Cytochrome P450 AXL 558 genome.wustl.edu 37 19 41762496 41762496 + Missense_Mutation SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_021913.3 +1 reviewed p.Y726H 1.000 33 0% 65 44.6% 2 0% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like) ATP1A3 478 genome.wustl.edu 37 19 42485962 42485962 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152296.3 -1 reviewed p.S405L 0.998 37 0% 78 32.1% 0 - probably_damaging(0.993) deleterious(0.01) deleterious(0.856) HMMPfam_Hydrolase,superfamily_SSF56784,superfamily_SSF81660,superfamily_SSF81665 POU2F2 5452 genome.wustl.edu 37 19 42626521 42626521 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002698.2 -1 validated p.R35I 1.000 44 0% 161 35.4% 0 - possibly_damaging(0.862) deleterious(0) deleterious(0.778) NULL LIPE 3991 genome.wustl.edu 37 19 42931209 42931209 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005357.2 -1 reviewed p.K31N 0.005 55 1.8% 206 33.5% 0 - benign(0) tolerated(0.13) neutral(0.253) NULL PSG8 440533 genome.wustl.edu 37 19 43268190 43268190 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_182707.2 -1 validated p.S103Y 0.043 89 0% 351 37.3% 0 - benign(0.014) tolerated(0.08) neutral(0.300) HMMSmart_IG,HMMPfam_V-set,superfamily_SSF48726 KCNN4 3783 genome.wustl.edu 37 19 44284948 44284948 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002250.2 -1 reviewed p.E22D 1.000 43 0% 86 40.7% 19 57.8% possibly_damaging(0.902) deleterious(0) deleterious(0.801) HMMPfam_SK_channel ZNF285 26974 genome.wustl.edu 37 19 44896585 44896585 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152354.3 -1 validated p.E21K 0.980 32 0% 134 44% 0 - benign(0.135) deleterious(0) neutral(0.456) HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352) SULT2A1 6822 genome.wustl.edu 37 19 48382322 48382322 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003167.3 -1 reviewed p.L180 0.777 26 0% 108 40.7% 0 - - - - HMMPfam_Sulfotransfer_1,superfamily_P-loop containing nucleoside triphosphate hydrolases PLA2G4C 8605 genome.wustl.edu 37 19 48602985 48602985 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003706.2 -1 reviewed p.E130D 0.093 28 0% 103 49.5% 1 100% benign(0.275) tolerated(0.29) neutral(0.058) HMMSmart_PLAc,superfamily_Acyl_Trfase/lysoPlipase KCNJ14 3770 genome.wustl.edu 37 19 48967513 48967513 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_013348.2 +1 reviewed p.D264N 1.000 43 0% 97 40.2% 1 100% probably_damaging(1) tolerated(0.2) deleterious(0.549) HMMPfam_IRK,superfamily_Ig_E-set KCNA7 3743 genome.wustl.edu 37 19 49573328 49573328 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_031886.2 -1 reviewed p.E455K 0.969 12 0% 21 42.9% 0 - possibly_damaging(0.565) deleterious(0) deleterious(0.637) NULL ACPT 93650 genome.wustl.edu 37 19 51297164 51297164 + Silent SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_033068.2 +1 reviewed p.I266 1.000 19 0% 67 35.8% 0 - - - - HMMPfam_Acid_phosphat_A,superfamily_Phosphoglycerate mutase-like ZNF577 84765 genome.wustl.edu 37 19 52376924 52376924 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_032679.2 -1 validated p.D107Y 0.010 24 0% 80 35% 0 - probably_damaging(0.978) tolerated(0.08) deleterious(0.720) NULL ZNF649 65251 genome.wustl.edu 37 19 52394796 52394796 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_023074.3 -1 validated p.R198I 0.001 59 0% 181 42.5% 6 16.6% probably_damaging(0.974) deleterious(0) deleterious(0.861) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 ENSG00000249246 0 genome.wustl.edu 37 19 52562314 52562314 + RNA SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000514408 -1 known NULL 0.004 51 0% 44 52.3% 0 - - - - - ZNF836 162962 genome.wustl.edu 37 19 52659047 52659047 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001102657.1 -1 provisional p.R630I 0.017 67 0% 130 34.6% 4 25% probably_damaging(1) tolerated(0.13) deleterious(0.752) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 VN1R4 317703 genome.wustl.edu 37 19 53770667 53770667 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_173857.2 -1 validated p.F84L 0.043 22 0% 35 25.7% 0 - possibly_damaging(0.523) tolerated(0.62) neutral(0.180) HMMPfam_V1R,superfamily_Family A G protein-coupled receptor-like ZNF845 91664 genome.wustl.edu 37 19 53855866 53855866 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_138374.1 +1 validated p.F646L 0.000 67 0% 111 49.5% 1 100% benign(0.042) tolerated(0.62) neutral(0.007) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers CACNG7 59284 genome.wustl.edu 37 19 54445391 54445391 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_031896.3 +1 reviewed p.C224 1.000 23 0% 29 31% 0 - - - - NULL TMC4 147798 genome.wustl.edu 37 19 54664667 54664667 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001145303.1 -1 validated p.L647I 0.276 65 0% 64 35.9% 339 50.1% unknown(0) deleterious(0) - NULL TNNT1 7138 genome.wustl.edu 37 19 55649407 55649407 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003283.4 -1 reviewed p.K141N 1.000 41 0% 178 38.2% 6 100% probably_damaging(0.996) deleterious(0) deleterious(0.906) HMMPfam_Troponin PTPRH 5794 genome.wustl.edu 37 19 55713543 55713543 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002842.3 -1 validated p.S345N 0.000 51 0% 195 35.9% 1 0% benign(0.009) tolerated(0.51) neutral(0.009) HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III ZNF583 147949 genome.wustl.edu 37 19 56935000 56935000 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152478.2 +1 validated p.E325K 0.002 107 0% 210 38.6% 2 0% probably_damaging(0.999) tolerated(0.56) deleterious(0.497) HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,superfamily_SSF57667 ZNF749 388567 genome.wustl.edu 37 19 57954673 57954673 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001023561.2 +1 provisional p.A53S 0.000 21 0% 73 43.8% 2 50% benign(0.199) tolerated(0.77) neutral(0.020) HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352) ZNF549 256051 genome.wustl.edu 37 19 58048770 58048770 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_153263.1 +1 provisional p.T120M 0.000 27 0% 81 39.5% 1 0% probably_damaging(1) tolerated(0.28) deleterious(0.531) superfamily_C2H2 and C2HC zinc fingers ZNF416 55659 genome.wustl.edu 37 19 58084034 58084034 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_017879.1 -1 provisional p.G413V 0.000 54 0% 129 44.2% 3 33.3% probably_damaging(0.953) tolerated(0.12) deleterious(0.657) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 ZNF551 90233 genome.wustl.edu 37 19 58198582 58198582 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_138347.3 +1 validated p.E297D 0.985 38 0% 75 25.3% 0 - benign(0.156) deleterious(0.02) neutral(0.397) HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers ZNF154 7710 genome.wustl.edu 37 19 58213008 58213008 + Nonsense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001085384.1 -1 validated p.R437* 0.002 51 0% 128 35.9% 0 - - - - NULL ZNF552 79818 genome.wustl.edu 37 19 58320200 58320200 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024762.3 -1 validated p.E144D 1.000 97 0% 311 34.1% 3 66.6% possibly_damaging(0.529) tolerated(0.1) neutral(0.465) superfamily_C2H2 and C2HC zinc fingers RPS5 6193 genome.wustl.edu 37 19 58904474 58904474 + Silent SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001009.3 +1 reviewed p.G80 0.964 22 0% 35 25.7% 4452 47.5% - - - HMMPfam_Ribosomal_S7,PatternScan_RIBOSOMAL_S7,superfamily_Ribosomal protein S7 NSFL1C 55968 genome.wustl.edu 37 20 1426360 1426360 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_016143.3 -1 reviewed p.R301W 1.000 37 0% 125 41.6% 142 50% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_UBX,HMMSmart_SM00166,superfamily_Ubiquitin-like NSFL1C 55968 genome.wustl.edu 37 20 1445016 1445016 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_016143.3 -1 reviewed p.S54L 1.000 20 0% 70 41.4% 53 41.5% possibly_damaging(0.528) tolerated(0.21) neutral(0.222) NULL TGM6 343641 genome.wustl.edu 37 20 2413137 2413137 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_198994.2 +1 validated p.V657M 0.984 14 0% 43 41.9% 0 - benign(0.066) tolerated(0.08) neutral(0.304) HMMPfam_Transglut_C,superfamily_Transglutaminase two C-terminal domains CPXM1 56265 genome.wustl.edu 37 20 2777048 2777048 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_019609.4 -1 reviewed p.E363K 1.000 34 0% 64 37.5% 9 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Peptidase_M14,PatternScan_CARBOXYPEPT_ZN_1,superfamily_Zn-dependent exopeptidases PTPRA 5786 genome.wustl.edu 37 20 3002792 3002792 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002836.3 +1 reviewed p.I418 0.960 40 0% 78 35.9% 39 41% - - - HMMPfam_Y_phosphatase,HMMSmart_PTPc,superfamily_SSF52799 PLCB1 23236 genome.wustl.edu 37 20 8769164 8769164 + Silent SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015192.2 +1 reviewed p.I1060 1.000 85 0% 145 42.8% 1 0% - - - HMMPfam_PLC-beta_C PLCB4 5332 genome.wustl.edu 37 20 9416241 9416241 + Silent SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000933.3 +1 reviewed p.F841 1.000 77 1.3% 221 32.6% 14 64.2% - - - NULL ANKRD5 63926 genome.wustl.edu 37 20 10035177 10035177 + Missense_Mutation SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_022096.4 +1 validated p.V701A 1.000 77 0% 130 31.5% 3 100% possibly_damaging(0.653) deleterious(0.01) deleterious(0.635) NULL TASP1 55617 genome.wustl.edu 37 20 13539737 13539737 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_017714.2 -1 reviewed p.R198I 1.000 148 0% 334 44.9% 1 0% possibly_damaging(0.788) deleterious(0.03) deleterious(0.659) HMMPfam_Asparaginase_2,superfamily_SSF56235 MACROD2 140733 genome.wustl.edu 37 20 15913928 15913928 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_080676.5 +1 validated p.N261K 0.185 70 0% 110 33.6% 0 - possibly_damaging(0.482) tolerated(0.11) neutral(0.431) NULL SNRPB2 6629 genome.wustl.edu 37 20 16712971 16712971 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003092.3 +1 reviewed p.G76D 1.000 53 0% 143 49.7% 41 46.3% benign(0.003) tolerated(1) - HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD BFSP1 631 genome.wustl.edu 37 20 17475613 17475613 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001195.3 -1 reviewed p.K368 1.000 135 0% 426 38% 1 100% - - - NULL RRBP1 6238 genome.wustl.edu 37 20 17622506 17622506 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001042576.1 -1 reviewed p.K274T 1.000 60 0% 89 42.7% 149 50.3% probably_damaging(0.995) deleterious(0) deleterious(0.902) NULL SEC23B 10483 genome.wustl.edu 37 20 18508162 18508162 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006363.4 +1 reviewed p.R339Q 1.000 43 0% 206 39.3% 33 48.4% probably_damaging(0.998) tolerated(0.31) deleterious(0.501) HMMPfam_Sec23_trunk,superfamily_SSF53300,superfamily_SSF81995 C20orf26 26074 genome.wustl.edu 37 20 20269276 20269276 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015585.3 +1 validated p.K940N 1.000 18 0% 60 45% 7 57.1% probably_damaging(1) deleterious(0.02) deleterious(0.883) superfamily_FAD/NAD(P)-binding domain CD93 22918 genome.wustl.edu 37 20 23066086 23066086 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_012072.3 -1 reviewed p.F248 0.000 16 0% 52 34.6% 2 0% - - - NULL CSTL1 128817 genome.wustl.edu 37 20 23421021 23421021 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_138283.1 +1 reviewed p.K39N 0.013 32 0% 76 43.4% 0 - benign(0.071) deleterious(0.02) neutral(0.388) HMMSmart_CY,superfamily_SSF54403 EFCAB8 388795 genome.wustl.edu 37 20 31486376 31486376 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000440534 +1 known p.E345D 0.002 26 0% 98 41.8% 0 - benign(0) tolerated(0.66) neutral(0.003) superfamily_WD40 repeat-like BPIFB1 92747 genome.wustl.edu 37 20 31890752 31890752 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_033197.2 +1 reviewed p.V338M 0.691 20 0% 45 31.1% 681 30.9% probably_damaging(0.978) deleterious(0.01) deleterious(0.826) superfamily_Bactericidal permeability-increasing protein BPI ZNF341 84905 genome.wustl.edu 37 20 32371618 32371618 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_032819.3 +1 validated p.K593N 1.000 12 0% 45 33.3% 1 100% possibly_damaging(0.751) tolerated(0.16) neutral(0.335) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 CEP250 11190 genome.wustl.edu 37 20 34099444 34099444 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_007186.3 +1 reviewed p.A2440T 0.001 30 0% 25 28% 44 47.7% benign(0) tolerated(1) - NULL C20orf173 140873 genome.wustl.edu 37 20 34116753 34116753 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000246199 -1 known p.L36I 0.000 31 0% 63 42.9% 0 - possibly_damaging(0.763) - - NULL RBL1 5933 genome.wustl.edu 37 20 35695516 35695516 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002895.2 -1 reviewed p.R189W 1.000 93 0% 151 43% 2 0% probably_damaging(0.997) tolerated(0.06) deleterious(0.788) NULL LBP 3929 genome.wustl.edu 37 20 37001732 37001732 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004139.2 +1 reviewed p.A426V 0.084 27 0% 127 40.2% 0 - benign(0.022) tolerated(0.25) neutral(0.038) HMMPfam_LBP_BPI_CETP_C,HMMSmart_SM00329,superfamily_Bactericidal permeability-increasing protein BPI TOP1 7150 genome.wustl.edu 37 20 39745020 39745020 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003286.2 +1 reviewed p.E604* 1.000 15 0% 81 39.5% 34 8.8% - - - superfamily_DNA breaking-rejoining enzymes,HMMSmart_SM00435,HMMPfam_Topoisom_I MYBL2 4605 genome.wustl.edu 37 20 42320898 42320898 + Missense_Mutation SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002466.2 +1 reviewed p.Y201C 0.999 24 0% 42 31% 16 31.2% probably_damaging(0.999) tolerated(0.17) deleterious(0.549) NULL SEMG1 6406 genome.wustl.edu 37 20 43836952 43836952 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003007.3 +1 reviewed p.E338 0.000 77 0% 93 36.6% 0 - - - - HMMPfam_Semenogelin PLTP 5360 genome.wustl.edu 37 20 44536337 44536337 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006227.2 -1 reviewed p.V203M 0.989 40 0% 42 42.9% 572 46.1% probably_damaging(0.999) deleterious(0.02) deleterious(0.873) HMMSmart_SM00328,superfamily_Bactericidal permeability-increasing protein BPI CD40 958 genome.wustl.edu 37 20 44757180 44757180 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000372278 +1 known p.E62* 0.002 23 0% 35 42.9% 0 - - - - NULL ENSG00000245952 0 genome.wustl.edu 37 20 47274588 47274588 + RNA SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000456747 +1 known NULL 0.000 132 0% 60 36.7% 0 - - - - - ARFGEF2 10564 genome.wustl.edu 37 20 47589780 47589780 + Nonsense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006420.2 +1 reviewed p.Q542* 1.000 50 0% 162 40.7% 2 0% - - - superfamily_ARM-type_fold ARFGEF2 10564 genome.wustl.edu 37 20 47612370 47612370 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006420.2 +1 reviewed p.E1058* 1.000 66 0% 237 38.8% 0 - - - - superfamily_ARM-type_fold ADNP 23394 genome.wustl.edu 37 20 49508433 49508433 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015339.2 -1 reviewed p.H940N 0.938 49 0% 134 43.3% 42 45.2% benign(0.003) deleterious(0) neutral(0.445) NULL CTSZ 1522 genome.wustl.edu 37 20 57572773 57572773 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001336.3 -1 reviewed p.E175* 0.616 47 0% 164 43.3% 142 5.6% - - - HMMPfam_Peptidase_C1,HMMSmart_SM00645,superfamily_Cysteine proteinases CDH4 1002 genome.wustl.edu 37 20 60503310 60503310 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001794.2 +1 reviewed p.A612T 1.000 26 0% 21 33.3% 0 - benign(0.278) deleterious(0.01) neutral(0.435) HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin C20orf166 128826 genome.wustl.edu 37 20 61167681 61167681 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_178463.3 +1 validated p.E51* 0.007 44 0% 88 45.5% 0 - - - - NULL TCFL5 10732 genome.wustl.edu 37 20 61485378 61485378 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006602.2 -1 validated p.S457Y 0.669 63 0% 149 26.8% 4 50% probably_damaging(0.99) deleterious(0) deleterious(0.886) NULL PRIC285 85441 genome.wustl.edu 37 20 62191879 62191879 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001037335.2 -1 reviewed p.E2485K 0.977 134 0% 130 46.2% 9 11.1% benign(0.064) tolerated(0.06) neutral(0.327) superfamily_P-loop containing nucleoside triphosphate hydrolases TPTE 7179 genome.wustl.edu 37 21 10914364 10914364 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_199261.2 -1 validated p.S452L 0.029 281 0.4% 363 14.3% 0 - benign(0.097) tolerated(0.22) neutral(0.050) superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_PTEN_C2 TPTE 7179 genome.wustl.edu 37 21 10914405 10914405 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_199261.2 -1 validated p.E438D 0.000 353 0% 449 14.3% 0 - benign(0.177) tolerated(0.39) neutral(0.033) superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_PTEN_C2 TPTE 7179 genome.wustl.edu 37 21 10933894 10933894 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_199261.2 -1 validated p.D329Y 0.986 354 0% 708 15.5% 0 - probably_damaging(0.998) deleterious(0) deleterious(0.919) superfamily_(Phosphotyrosine protein) phosphatases II ANKRD20A11P 391267 genome.wustl.edu 37 21 15339758 15339758 + Splice_Site SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000429521 -1 known NULL 0.004 223 0% 109 41.3% 0 - - - - - NCAM2 4685 genome.wustl.edu 37 21 22881273 22881273 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004540.2 +1 reviewed p.R727W 0.999 28 0% 151 44.4% 0 - probably_damaging(1) deleterious(0.04) deleterious(0.849) NULL RWDD2B 10069 genome.wustl.edu 37 21 30378949 30378949 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_016940.2 -1 validated p.R250I 1.000 107 0% 209 38.3% 12 58.3% probably_damaging(0.999) deleterious(0.01) deleterious(0.896) HMMPfam_DUF1115 USP16 10600 genome.wustl.edu 37 21 30418995 30418995 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001032410.1 +1 reviewed p.R455Q 1.000 18 0% 33 42.4% 5 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_UCH,superfamily_Cysteine proteinases GRIK1 2897 genome.wustl.edu 37 21 30949381 30949381 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000830.3 -1 reviewed p.R678I 1.000 32 0% 100 40% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Lig_chan,HMMSmart_SM00079,superfamily_Periplasmic binding protein-like II URB1 9875 genome.wustl.edu 37 21 33723139 33723139 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014825.2 -1 validated p.A902 0.000 20 0% 28 60.7% 4 0% - - - NULL DSCAM 1826 genome.wustl.edu 37 21 41465735 41465735 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001389.3 -1 validated p.R1255C 0.920 24 0% 73 41.1% 0 - probably_damaging(0.989) deleterious(0.02) deleterious(0.823) HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III ZNF295 49854 genome.wustl.edu 37 21 43411492 43411492 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001098402.1 -1 validated p.E905* 0.961 22 0% 41 46.3% 6 66.6% - - - superfamily_C2H2 and C2HC zinc fingers CBS 875 genome.wustl.edu 37 21 44488638 44488638 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000071.2 -1 reviewed p.F99 0.047 27 0% 153 37.9% 1 100% - - - HMMPfam_PALP,superfamily_Tryptophan synthase beta subunit-like PLP-dependent enzymes ITGB2 3689 genome.wustl.edu 37 21 46320339 46320339 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000211.3 -1 reviewed p.D265Y 0.972 21 0% 54 38.9% 9 11.1% probably_damaging(1) deleterious(0.03) deleterious(0.865) HMMSmart_VWA,HMMPfam_Integrin_beta,HMMSmart_INB,superfamily_SSF53300 COL6A1 1291 genome.wustl.edu 37 21 47407535 47407535 + Silent SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001848.2 +1 reviewed p.G257 0.999 45 0% 35 34.3% 8 12.5% - - - HMMPfam_Collagen TUBA8 51807 genome.wustl.edu 37 22 18613802 18613802 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_018943.1 +1 provisional p.E417* 1.000 34 0% 80 38.8% 0 - - - - superfamily_Tubulin C-terminal domain-like SERPIND1 3053 genome.wustl.edu 37 22 21134137 21134137 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000185.3 +1 reviewed p.S179 0.000 46 0% 96 47.9% 0 - - - - HMMPfam_Serpin,HMMSmart_SM00093,superfamily_Serpins IGLV7-43 28776 genome.wustl.edu 37 22 22749532 22749532 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000390298 +1 known p.S19Y 0.828 37 0% 88 34.1% 2 0% probably_damaging(0.996) deleterious(0) deleterious(0.906) superfamily_Immunoglobulin IGLV5-37 28783 genome.wustl.edu 37 22 22782300 22782300 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000390300 +1 known p.L100V 0.003 32 0% 89 41.6% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin LOC100133224 100133224 genome.wustl.edu 37 22 31552529 31552529 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XM_001716151.1 -1 model p.D180N 1.000 19 0% 94 39.4% 0 - - - - HMMPfam_LSM,HMMSmart_SM00651,superfamily_Sm-like ribonucleoproteins PRR14L 253143 genome.wustl.edu 37 22 32108721 32108721 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_173566.2 -1 validated p.D1702Y 0.994 14 0% 42 52.4% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL XRCC6 2547 genome.wustl.edu 37 22 42046867 42046867 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001469.3 +1 reviewed p.F367 0.990 38 0% 95 49.5% 153 40.5% - - - HMMPfam_Ku,HMMSmart_Ku78,superfamily_SPOC-like BIK 638 genome.wustl.edu 37 22 43524524 43524524 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001197.3 +1 reviewed p.D95N 0.008 29 0% 104 38.5% 60 48.3% probably_damaging(0.988) tolerated(0.94) neutral(0.438) NULL PARVB 29780 genome.wustl.edu 37 22 44536022 44536022 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001003828.1 +1 validated p.F270 0.998 68 0% 297 38% 11 0% - - - superfamily_Calponin-homology SMC1B 27127 genome.wustl.edu 37 22 45755816 45755816 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_148674.3 -1 validated p.E911* 0.994 54 0% 167 40.1% 0 - - - - HMMPfam_SMC_N,superfamily_SSF52540 PPARA 5465 genome.wustl.edu 37 22 46614186 46614186 + Silent SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001001928.2 +1 reviewed p.L132 0.017 18 0% 88 45.5% 4 25% - - - HMMPfam_zf-C4,HMMSmart_SM00399,superfamily_Glucocorticoid receptor-like (DNA-binding domain) PKDREJ 10343 genome.wustl.edu 37 22 46653000 46653000 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006071.1 -1 reviewed p.D2074N 0.010 34 0% 77 59.7% 0 - possibly_damaging(0.739) tolerated(0.7) neutral(0.273) HMMPfam_PKD_channel ACR 49 genome.wustl.edu 37 22 51183296 51183296 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001097.2 +1 reviewed p.P309 0.000 18 0% 94 22.3% 0 - - - - NULL PPP2R3B 28227 genome.wustl.edu 37 X 306357 306357 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_013239.4 -1 reviewed p.F310L 1.000 25 0% 123 36.6% 16 50% benign(0.409) deleterious(0) deleterious(0.577) superfamily_EF-hand GYG2 8908 genome.wustl.edu 37 X 2761306 2761306 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003918.2 +1 reviewed p.G51 0.978 23 0% 100 44% 7 100% - - - HMMPfam_Glyco_transf_8,superfamily_Nucleotide-diphospho-sugar transferases ARSF 416 genome.wustl.edu 37 X 3002467 3002467 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004042.3 +1 reviewed p.A197V 0.000 57 0% 179 35.2% 0 - benign(0.009) tolerated(0.54) neutral(0.008) HMMPfam_Sulfatase,superfamily_Alkaline phosphatase-like MXRA5 25878 genome.wustl.edu 37 X 3228396 3228396 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015419.3 -1 reviewed p.C2616 1.000 6 0.000 24 0.417 16 0% - - - HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin WWC3 55841 genome.wustl.edu 37 X 10102571 10102571 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015691.3 +1 validated p.R900W 1.000 34 0% 99 41.4% 5 0% probably_damaging(1) deleterious(0) deleterious(0.945) NULL PRPS2 5634 genome.wustl.edu 37 X 12828325 12828325 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000489404 +1 known p.R197L 0.000 25 0% 64 42.2% 0 - unknown(0) - - NULL FANCB 2187 genome.wustl.edu 37 X 14861760 14861760 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001018113.1 -1 reviewed p.E837* 0.127 148 0% 291 44.3% 2 0% - - - NULL FANCB 2187 genome.wustl.edu 37 X 14871187 14871187 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001018113.1 -1 reviewed p.D434Y 0.004 141 0% 243 16% 1 0% probably_damaging(0.998) tolerated(0.19) deleterious(0.524) NULL FANCB 2187 genome.wustl.edu 37 X 14882851 14882851 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001018113.1 -1 reviewed p.R261Q 0.000 51 0% 128 34.4% 1 100% benign(0.013) tolerated(0.41) neutral(0.015) NULL PDHA1 5160 genome.wustl.edu 37 X 19372657 19372657 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000284.3 +1 reviewed p.D187Y 1.000 89 0% 369 40.7% 76 0% benign(0.427) deleterious(0.02) deleterious(0.522) HMMPfam_E1_dh,superfamily_Thiamin diphosphate-binding fold (THDP-binding) RPS6KA3 6197 genome.wustl.edu 37 X 20179807 20179807 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004586.2 -1 reviewed p.F638L 1.000 44 0% 180 41.1% 9 0% benign(0.002) tolerated(0.13) neutral(0.253) HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase ZNF645 158506 genome.wustl.edu 37 X 22291514 22291514 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152577.2 +1 provisional p.R136C 0.145 31 0% 40 37.5% 0 - probably_damaging(0.965) deleterious(0) deleterious(0.851) HMMSmart_ZnF_C2H2 PTCHD1 139411 genome.wustl.edu 37 X 23411555 23411555 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_173495.2 +1 validated p.V640 0.494 29 0% 65 41.5% 0 - - - - HMMPfam_Patched PTCHD1 139411 genome.wustl.edu 37 X 23411964 23411964 + Missense_Mutation SNP C C A rs193277496 by1000genomes TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_173495.2 +1 validated p.L777M 1.000 51 0% 216 38.9% 0 - probably_damaging(0.961) deleterious(0.04) deleterious(0.753) HMMPfam_Patched,superfamily_Multidrug efflux transporter AcrB transmembrane domain SAT1 6303 genome.wustl.edu 37 X 23803528 23803528 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002970.2 +1 reviewed p.V96M 1.000 149 0% 500 43.2% 2586 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Acetyltransf_1,superfamily_Acyl-CoA N-acyltransferases (Nat) ZFX 7543 genome.wustl.edu 37 X 24228866 24228866 + Silent SNP T T C novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003410.3 +1 reviewed p.T597 1.000 55 0% 134 44% 7 0% - - - HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers PDK3 5165 genome.wustl.edu 37 X 24557271 24557271 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001142386.2 +1 reviewed p.R413I 1.000 62 0% 132 32.6% 7 0% benign(0.379) tolerated(0.08) neutral(0.421) NULL POLA1 5422 genome.wustl.edu 37 X 24732727 24732727 + Missense_Mutation SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_016937.3 +1 reviewed p.T129A 0.996 84 0% 188 44.1% 1 0% benign(0) tolerated(0.62) neutral(0.004) NULL MAGEB4 4115 genome.wustl.edu 37 X 30261072 30261072 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002367.3 +1 reviewed p.P274S 0.003 55 0% 157 38.2% 0 - benign(0.17) deleterious(0) neutral(0.460) HMMPfam_MAGE DMD 1756 genome.wustl.edu 37 X 32366528 32366528 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004006.2 -1 reviewed p.D1815N 1.000 181 0% 391 39.6% 2 100% benign(0.382) tolerated(0.2) neutral(0.171) HMMSmart_SM00150 FAM47B 170062 genome.wustl.edu 37 X 34962551 34962551 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152631.2 +1 validated p.A535T 0.000 49 0% 124 40.3% 0 - benign(0.01) deleterious(0.04) neutral(0.349) NULL CXorf30 645090 genome.wustl.edu 37 X 36379505 36379505 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001098843.3 +1 validated p.S417Y 0.000 59 0% 132 46.2% 3 0% benign(0.026) tolerated(0.07) neutral(0.320) NULL SRPX 8406 genome.wustl.edu 37 X 38019353 38019353 + Missense_Mutation SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006307.4 -1 validated p.I291T 0.833 18 0% 64 40.6% 3 33.3% benign(0) tolerated(0.55) neutral(0.007) HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain BCOR 54880 genome.wustl.edu 37 X 39933752 39933752 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001123385.1 -1 reviewed p.A283T 0.643 61 0% 22 31.8% 8 0% benign(0) tolerated(0.1) neutral(0.286) NULL BCOR 54880 genome.wustl.edu 37 X 39935769 39935769 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001123385.1 -1 reviewed p.D35Y 1.000 77 0% 224 39.7% 1 0% probably_damaging(1) deleterious(0) deleterious(0.945) NULL EFHC2 80258 genome.wustl.edu 37 X 44120319 44120319 + Splice_Site SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000333807 -1 known e4+2 1.000 26 0% 73 28.8% 0 - - - - - FUNDC1 139341 genome.wustl.edu 37 X 44386560 44386560 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_173794.3 -1 validated p.D105Y 1.000 203 0% 520 39.8% 36 0% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_FUN14 DUSP21 63904 genome.wustl.edu 37 X 44703762 44703762 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_022076.3 +1 reviewed p.S128 0.561 32 0% 67 41.8% 0 - - - - HMMPfam_DSPc,HMMSmart_DSPc,superfamily_SSF52799 ZNF674 641339 genome.wustl.edu 37 X 46359810 46359810 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001039891.2 -1 validated p.R405I 1.000 97 0% 229 34.9% 0 - probably_damaging(0.988) deleterious(0) deleterious(0.882) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 ZNF674 641339 genome.wustl.edu 37 X 46360498 46360498 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001039891.2 -1 validated p.A176T 0.006 99 0% 250 41.6% 0 - benign(0.031) tolerated(0.65) neutral(0.005) NULL ZNF157 7712 genome.wustl.edu 37 X 47272605 47272605 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003446.3 +1 reviewed p.R378I 0.999 73 0% 118 36.4% 0 - benign(0.349) tolerated(0.06) neutral(0.433) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 SSX6 280657 genome.wustl.edu 37 X 47969909 47969909 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000304314 +1 known p.E79* 0.001 272 0.4% 692 38.6% 0 - - - - HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352) FTSJ1 24140 genome.wustl.edu 37 X 48337491 48337491 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_012280.2 +1 reviewed p.D116 0.982 38 0% 111 29.7% 53 0% - - - HMMPfam_FtsJ,superfamily_S-adenosyl-L-methionine-dependent methyltransferases WDR45 11152 genome.wustl.edu 37 X 48932468 48932468 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_007075.3 -1 reviewed p.D360E 1.000 36 0% 92 38% 82 0% benign(0) tolerated(0.31) neutral(0.027) NULL CACNA1F 778 genome.wustl.edu 37 X 49071559 49071559 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005183.2 -1 reviewed p.A1206V 0.989 49 0% 94 34% 0 - benign(0.025) tolerated(0.71) neutral(0.003) superfamily_Voltage-gated potassium channels CLCN5 1184 genome.wustl.edu 37 X 49855335 49855335 + Nonsense_Mutation SNP C C T rs151340621 TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001127898.1 +1 reviewed p.R718* 1.000 64 0% 155 38.1% 0 - - - - HMMPfam_CBS AKAP4 8852 genome.wustl.edu 37 X 49958394 49958394 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003886.2 -1 reviewed p.E324* 1.000 27 0% 33 51.5% 0 - - - - HMMPfam_AKAP_110,HMMSmart_SM00807 CCNB3 85417 genome.wustl.edu 37 X 50052167 50052167 + Nonsense_Mutation SNP T T A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_033031.2 +1 reviewed p.L333* 0.000 35 0% 59 37.3% 0 - - - - NULL SSX7 280658 genome.wustl.edu 37 X 52674498 52674498 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_173358.2 -1 reviewed p.E188K 0.227 75 0% 446 24.9% 0 - probably_damaging(0.999) tolerated(0.16) deleterious(0.550) HMMPfam_SSXRD WNK3 65267 genome.wustl.edu 37 X 54277993 54277993 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020922.4 -1 reviewed p.S832Y 0.000 79 0% 225 41.3% 1 100% possibly_damaging(0.808) deleterious(0) deleterious(0.748) superfamily_Kinase_like MAGED2 10916 genome.wustl.edu 37 X 54839572 54839572 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014599.4 +1 reviewed p.R396H 1.000 78 0% 302 44% 223 0% probably_damaging(1) tolerated(0.1) deleterious(0.786) HMMPfam_MAGE TRO 7216 genome.wustl.edu 37 X 54949723 54949723 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001039705.1 +1 reviewed p.R253Q 0.044 77 0% 73 53.4% 0 - benign(0.07) tolerated(0.16) neutral(0.065) NULL PFKFB1 5207 genome.wustl.edu 37 X 54978531 54978531 + Missense_Mutation SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002625.2 -1 reviewed p.I218T 1.000 38 0% 102 44.1% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_6PF2K,superfamily_SSF52540 FOXR2 139628 genome.wustl.edu 37 X 55650634 55650634 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_198451.3 +1 validated p.D164N 0.000 23 0% 65 38.5% 0 - possibly_damaging(0.819) tolerated(0.45) neutral(0.322) NULL FAM123B 139285 genome.wustl.edu 37 X 63412637 63412637 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_152424.3 -1 reviewed p.R177H 1.000 20 0% 68 44.1% 1 100% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_WTX ZC3H12B 340554 genome.wustl.edu 37 X 64719098 64719098 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001010888.3 +1 reviewed p.S312Y 1.000 28 0% 58 36.2% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) NULL LAS1L 81887 genome.wustl.edu 37 X 64749688 64749688 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_031206.4 -1 validated p.E195D 0.013 211 0% 381 17.3% 14 42.8% benign(0.001) deleterious(0.04) neutral(0.349) NULL AR 367 genome.wustl.edu 37 X 66765746 66765746 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000044.2 +1 reviewed p.A253V 0.976 21 0% 79 34.2% 2 0% benign(0.007) deleterious(0.03) neutral(0.364) HMMPfam_Androgen_recep IL2RG 3561 genome.wustl.edu 37 X 70330938 70330938 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000487883 -1 known p.F14L 0.000 43 0% 81 43.2% 0 - unknown(0) - - NULL OGT 8473 genome.wustl.edu 37 X 70783231 70783231 + Missense_Mutation SNP A A T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_181672.2 +1 reviewed p.N773I 1.000 63 0% 172 39.5% 31 0% benign(0.084) tolerated(0.48) neutral(0.017) NULL RGAG4 340526 genome.wustl.edu 37 X 71349920 71349920 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001024455.3 -1 validated p.E491K 0.789 71 0% 136 45.6% 1 0% probably_damaging(0.984) deleterious(0.03) deleterious(0.795) NULL ERCC6L 54821 genome.wustl.edu 37 X 71425360 71425360 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_017669.2 -1 validated p.S1086Y 0.165 61 0% 156 39.7% 2 0% probably_damaging(0.99) deleterious(0) deleterious(0.886) NULL KIAA2022 340533 genome.wustl.edu 37 X 73959311 73959311 + Missense_Mutation SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001008537.2 -1 validated p.K1494Q 1.000 84 0% 166 50% 1 0% benign(0.188) deleterious(0.03) neutral(0.382) NULL ABCB7 22 genome.wustl.edu 37 X 74280063 74280063 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004299.3 -1 reviewed p.D681N 0.887 59 0% 158 42.4% 26 0% benign(0) tolerated(0.23) neutral(0.042) HMMPfam_ABC_tran,HMMSmart_AAA,superfamily_SSF52540 MAGT1 84061 genome.wustl.edu 37 X 77112296 77112296 + Silent SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_032121.5 -1 reviewed p.L234 1.000 72 0% 140 40% 12 0% - - - HMMPfam_OST3_OST6 ATP7A 538 genome.wustl.edu 37 X 77243985 77243985 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000052.4 +1 reviewed p.R123I 0.042 41 0% 133 43.6% 0 - benign(0.322) tolerated(0.18) neutral(0.157) superfamily_HMA heavy metal-associated domain ATP7A 538 genome.wustl.edu 37 X 77268586 77268586 + Nonsense_Mutation SNP C C T rs72554645 TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000052.4 +1 reviewed p.R795* 1.000 72 0% 277 43.7% 0 - - - - HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transmembrane domain M LPAR4 2846 genome.wustl.edu 37 X 78011105 78011105 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005296.2 +1 reviewed p.V247L 1.000 64 0% 136 42.6% 0 - possibly_damaging(0.799) tolerated(0.32) neutral(0.325) HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like HDX 139324 genome.wustl.edu 37 X 83588779 83588779 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_144657.4 -1 validated p.F604L 0.994 276 0% 168 42.9% 0 - benign(0) tolerated(1) - NULL HDX 139324 genome.wustl.edu 37 X 83723730 83723730 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_144657.4 -1 validated p.R334Q 0.720 56 0% 183 40.4% 0 - benign(0.307) tolerated(0.22) neutral(0.138) NULL KLHL4 56062 genome.wustl.edu 37 X 86924379 86924379 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_057162.2 +1 reviewed p.E716D 0.000 51 0% 116 44% 0 - benign(0.125) - - NULL CENPI 2491 genome.wustl.edu 37 X 100400134 100400134 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006733.2 +1 reviewed p.R549 0.975 83 0% 323 41.8% 1 0% - - - NULL BTK 695 genome.wustl.edu 37 X 100615741 100615741 + Silent SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000061.2 -1 reviewed p.I197 0.996 43 0% 143 41.3% 0 - - - - superfamily_SH3 GLA 2717 genome.wustl.edu 37 X 100653405 100653405 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000169.2 -1 reviewed p.A318T 1.000 35 0% 134 43.3% 134 0% probably_damaging(0.966) deleterious(0.03) deleterious(0.772) superfamily_(Trans)glycosidases ARMCX3 51566 genome.wustl.edu 37 X 100880984 100880984 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_016607.3 +1 reviewed p.E339* 1.000 26 0% 42 26.2% 17 0% - - - HMMPfam_DUF634,superfamily_ARM-type_fold ARMCX5 64860 genome.wustl.edu 37 X 101857176 101857176 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_022838.3 +1 validated p.A36V 0.001 22 0% 59 37.3% 7 0% benign(0) tolerated(0.17) neutral(0.059) NULL GLRA4 441509 genome.wustl.edu 37 X 102983092 102983092 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001024452.2 -1 validated p.L14F 1.000 27 0% 135 51.1% 0 - probably_damaging(0.981) - - NULL NRK 203447 genome.wustl.edu 37 X 105152945 105152945 + Nonsense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_198465.2 +1 validated p.R438* 0.001 30 0% 35 37.1% 0 - - - - NULL CLDN2 9075 genome.wustl.edu 37 X 106171559 106171559 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_020384.3 +1 reviewed p.S34F 1.000 36 0% 52 42.3% 0 - probably_damaging(0.986) deleterious(0) deleterious(0.879) HMMPfam_PMP22_Claudin RBM41 55285 genome.wustl.edu 37 X 106359125 106359125 + Silent SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000434854 -1 known p.L93I 0.960 78 0% 260 44.2% 2 0% - - - NULL CXorf41 139212 genome.wustl.edu 37 X 106482152 106482152 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_173494.1 +1 validated p.A144T 1.000 125 0% 203 39.9% 20 100% benign(0.059) deleterious(0.01) neutral(0.410) NULL COL4A6 1288 genome.wustl.edu 37 X 107408660 107408660 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001847.2 -1 reviewed p.P1251S 1.000 24 0% 30 53.3% 0 - possibly_damaging(0.706) tolerated(0.11) deleterious(0.526) HMMPfam_Collagen ALG13 79868 genome.wustl.edu 37 X 110951353 110951353 + Missense_Mutation SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000394780 +1 known p.D161G 0.372 34 0% 167 36.5% 2 0% benign(0.002) - - NULL LUZP4 51213 genome.wustl.edu 37 X 114541267 114541267 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_016383.3 +1 validated p.L280 0.001 19 0% 76 43.4% 0 - - - - NULL AGTR2 186 genome.wustl.edu 37 X 115304077 115304077 + Nonsense_Mutation SNP C C T rs186326479 by1000genomes TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000686.4 +1 reviewed p.R182* 0.998 84 0% 165 38.8% 0 - - - - HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like KLHL13 90293 genome.wustl.edu 37 X 117043345 117043345 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_033495.3 -1 reviewed p.E429* 1.000 40 0% 81 38.3% 18 0% - - - HMMSmart_SM00612,superfamily_Galactose oxidase central domain DOCK11 139818 genome.wustl.edu 37 X 117815024 117815024 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_144658.3 +1 validated p.S1892* 1.000 62 0% 88 34.1% 2 0% - - - HMMPfam_Ded_cyto ZCCHC12 170261 genome.wustl.edu 37 X 117960401 117960401 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_173798.2 +1 provisional p.F398L 0.001 8 0.000 48 0.271 0 - benign(0) tolerated(1) - NULL SLC25A43 203427 genome.wustl.edu 37 X 118587004 118587004 + Silent SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_145305.2 +1 reviewed p.P334 0.002 76 0% 144 31.9% 1 0% - - - NULL SLC25A5 292 genome.wustl.edu 37 X 118603829 118603829 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001152.4 +1 reviewed p.R106I 0.999 36 0% 151 28.5% 248 0% benign(0.011) tolerated(0.08) neutral(0.300) superfamily_Mitochondrial carrier SEPT6 23157 genome.wustl.edu 37 X 118786883 118786883 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_015129.5 -1 reviewed p.F154L 1.000 41 0% 174 45.4% 12 75% benign(0.111) deleterious(0.04) neutral(0.357) HMMPfam_Septin,superfamily_P-loop containing nucleoside triphosphate hydrolases RPL39 6170 genome.wustl.edu 37 X 118923917 118923917 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001000.2 -1 reviewed p.R21C 1.000 89 0% 216 44% 1952 0% benign(0.042) tolerated(0.05) neutral(0.348) HMMPfam_Ribosomal_L39,superfamily_Ribosomal protein L39e UPF3B 65109 genome.wustl.edu 37 X 118986859 118986859 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_080632.1 -1 reviewed p.E11D 1.000 35 0% 131 46.6% 2 100% unknown(0) tolerated(0.18) - NULL STAG2 10735 genome.wustl.edu 37 X 123215302 123215302 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001042749.1 +1 validated p.E950* 1.000 101 0% 258 39.5% 0 - - - - superfamily_ARM-type_fold SH2D1A 4068 genome.wustl.edu 37 X 123504038 123504038 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002351.4 +1 reviewed p.V72I 1.000 48 0% 93 36.6% 0 - possibly_damaging(0.628) tolerated(0.07) deleterious(0.538) HMMPfam_SH2,HMMSmart_SM00252,superfamily_SH2 domain SMARCA1 6594 genome.wustl.edu 37 X 128582407 128582407 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003069.3 -1 reviewed p.R1015H 1.000 214 0% 519 32.8% 26 80.7% probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_SM00717,superfamily_Homeodomain-like,HMMPfam_SLIDE SMARCA1 6594 genome.wustl.edu 37 X 128602794 128602794 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_003069.3 -1 reviewed p.R885Q 1.000 158 0% 285 41.4% 39 94.8% benign(0.043) tolerated(0.41) neutral(0.017) HMMSmart_SM00717,superfamily_Homeodomain-like,superfamily_P-loop containing nucleoside triphosphate hydrolases UTP14A 10813 genome.wustl.edu 37 X 129055510 129055510 + Missense_Mutation SNP A A T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_006649.3 +1 reviewed p.K432I 0.002 43 0% 89 40.4% 6 0% probably_damaging(0.975) deleterious(0.02) deleterious(0.800) HMMPfam_Utp14 AIFM1 9131 genome.wustl.edu 37 X 129289204 129289204 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_145812.2 -1 reviewed p.S55F 1.000 55 0% 134 41.8% 0 - possibly_damaging(0.843) deleterious(0.04) deleterious(0.672) NULL FRMD7 90167 genome.wustl.edu 37 X 131212720 131212720 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_194277.2 -1 reviewed p.S442Y 1.000 60 0% 140 37.9% 0 - benign(0.005) deleterious(0) neutral(0.445) NULL USP26 83844 genome.wustl.edu 37 X 132161331 132161331 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_031907.1 -1 reviewed p.M306I 1.000 37 0% 16 50% 0 - possibly_damaging(0.858) tolerated(0.16) neutral(0.391) HMMPfam_UCH,PatternScan_UCH_2_1,superfamily_Cysteine proteinases USP26 83844 genome.wustl.edu 37 X 132161981 132161981 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_031907.1 -1 reviewed p.D90Y 0.482 120 0% 144 39.6% 0 - probably_damaging(0.999) deleterious(0.01) deleterious(0.896) NULL LOC644717 644717 genome.wustl.edu 37 X 134808474 134808474 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XM_002343850.1 -1 model p.S474Y 0.044 19 0% 86 34.9% 0 - - - - NULL SLC9A6 10479 genome.wustl.edu 37 X 135095129 135095129 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001042537.1 +1 reviewed p.R355W 1.000 43 2.3% 146 45.9% 2 50% probably_damaging(0.996) deleterious(0.01) deleterious(0.867) HMMPfam_Na_H_Exchanger MAP7D3 79649 genome.wustl.edu 37 X 135312624 135312624 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024597.3 -1 reviewed p.T557I 0.000 87 0% 254 40.2% 0 - benign(0.232) tolerated(0.5) neutral(0.033) NULL MAP7D3 79649 genome.wustl.edu 37 X 135313719 135313719 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_024597.3 -1 reviewed p.A466V 0.002 28 0% 148 43.9% 1 0% benign(0.001) tolerated(0.56) neutral(0.006) NULL GPR112 139378 genome.wustl.edu 37 X 135405449 135405449 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_153834.3 +1 reviewed p.E195K 0.214 55 0% 102 36.3% 0 - probably_damaging(0.967) deleterious(0) deleterious(0.853) superfamily_ConA_like_lec_gl GPR112 139378 genome.wustl.edu 37 X 135427538 135427538 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_153834.3 +1 reviewed p.S558Y 0.061 36 0% 46 43.5% 0 - probably_damaging(0.995) deleterious(0) deleterious(0.902) NULL GPR112 139378 genome.wustl.edu 37 X 135429713 135429713 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_153834.3 +1 reviewed p.S1283Y 0.000 38 0% 53 47.2% 0 - possibly_damaging(0.911) deleterious(0.03) deleterious(0.728) NULL HTATSF1 27336 genome.wustl.edu 37 X 135592250 135592250 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_014500.4 +1 reviewed p.D312Y 1.000 23 0% 90 31.1% 27 0% probably_damaging(0.996) deleterious(0) deleterious(0.906) HMMPfam_RRM_1,HMMSmart_RRM,superfamily_SSF54928 ARHGEF6 9459 genome.wustl.edu 37 X 135750226 135750226 + Nonsense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004840.2 -1 reviewed p.R765* 0.824 67 0% 341 33.4% 1 0% - - - NULL ARHGEF6 9459 genome.wustl.edu 37 X 135754267 135754267 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004840.2 -1 reviewed p.D683Y 1.000 54 0% 306 40.8% 1 100% possibly_damaging(0.947) tolerated(0.26) neutral(0.424) NULL ARHGEF6 9459 genome.wustl.edu 37 X 135772825 135772825 + Missense_Mutation SNP A A G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004840.2 -1 reviewed p.F377L 1.000 58 0% 247 36.4% 1 0% possibly_damaging(0.818) tolerated(0.11) deleterious(0.581) HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain) MCF2 4168 genome.wustl.edu 37 X 138711973 138711973 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001099855.1 -1 reviewed p.E167* 1.000 47 0% 113 20.4% 0 - - - - NULL ATP11C 286410 genome.wustl.edu 37 X 138857081 138857081 + Missense_Mutation SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_173694.4 -1 validated p.A665T 1.000 64 0% 178 47.8% 2 0% probably_damaging(0.988) tolerated(0.16) deleterious(0.497) superfamily_HAD-like ATP11C 286410 genome.wustl.edu 37 X 138867459 138867459 + Splice_Site SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_173694.4 -1 validated e16-1 1.000 115 0% 220 30% 0 - - - - - ATP11C 286410 genome.wustl.edu 37 X 138871548 138871548 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_173694.4 -1 validated p.Q439K 0.001 123 0% 317 43.8% 3 0% benign(0) tolerated(0.94) - superfamily_HAD-like,superfamily_Metal cation-transporting ATPase ATP-binding domain N ENSG00000207041 0 genome.wustl.edu 37 X 140212242 140212242 + RNA SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000384314 -1 known NULL 0.000 91 0% 134 20.1% 1 0% - - - - LOC392555 392555 genome.wustl.edu 37 X 141260896 141260896 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e XM_002343852.1 -1 model p.S344Y 0.006 32 0% 109 35.8% 0 - - - - HMMPfam_MAGE MIR890 100126303 genome.wustl.edu 37 X 145075796 145075796 + RNA SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000401256 -1 known NULL 0.000 23 0% 48 47.9% 0 - - - - - AFF2 2334 genome.wustl.edu 37 X 147743942 147743942 + Nonsense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_002025.3 +1 reviewed p.E232* 1.000 48 0% 86 39.5% 0 - - - - HMMPfam_AF-4 TMEM185A 84548 genome.wustl.edu 37 X 148690422 148690422 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_032508.2 -1 reviewed p.I103 0.841 48 0% 82 29.3% 11 90.9% - - - HMMPfam_Tmemb_185A MTM1 4534 genome.wustl.edu 37 X 149814235 149814235 + Missense_Mutation SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000252.2 +1 reviewed p.R253Q 0.999 44 0% 135 41.5% 2 100% possibly_damaging(0.905) deleterious(0.04) deleterious(0.708) HMMPfam_Myotub-related,superfamily_SSF52799 MTM1 4534 genome.wustl.edu 37 X 149818305 149818305 + Silent SNP T T G novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000252.2 +1 reviewed p.V328 1.000 46 0% 140 38.6% 1 0% - - - superfamily_SSF52799 CNGA2 1260 genome.wustl.edu 37 X 150912622 150912622 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_005140.1 +1 reviewed p.F549L 1.000 47 0% 128 37.5% 0 - probably_damaging(0.996) deleterious(0.05) deleterious(0.807) HMMPfam_cNMP_binding,HMMSmart_cNMP,superfamily_cNMP_binding GABRA3 2556 genome.wustl.edu 37 X 151393280 151393280 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000808.3 -1 reviewed p.D197Y 1.000 67 0% 134 32.1% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Neur_chan_LBD,superfamily_Neur_chan_LBD,PatternScan_NEUROTR_ION_CHANNEL CETN2 1069 genome.wustl.edu 37 X 151997761 151997761 + Nonsense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_004344.1 -1 reviewed p.E75* 0.978 66 0% 224 39.3% 197 0% - - - HMMSmart_EFh,HMMPfam_efhand,superfamily_SSF47473 ZNF275 10838 genome.wustl.edu 37 X 152613160 152613160 + Silent SNP C C T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001080485.2 +1 validated p.H339 0.991 6 0.000 9 0.556 3 0% - - - HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers OPN1MW2 728458 genome.wustl.edu 37 X 153496061 153496061 + Silent SNP G G A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e ENST00000430419 +1 known p.E126K 1.000 61 0% 298 33.6% 0 - - - - HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like GAB3 139716 genome.wustl.edu 37 X 153940545 153940545 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001081573.1 -1 reviewed p.R343I 1.000 35 0% 140 30.7% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) NULL DKC1 1736 genome.wustl.edu 37 X 154004541 154004541 + Missense_Mutation SNP G G T novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_001363.3 +1 reviewed p.S473I 0.993 39 0% 81 33.3% 34 0% possibly_damaging(0.604) deleterious(0.03) deleterious(0.574) NULL F8 2157 genome.wustl.edu 37 X 154194756 154194756 + Missense_Mutation SNP C C A novel TCGA-BS-A0TC-01A-11D-A10B-09 TCGA-BS-A0TC-10A-01D-A10B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx b0a83df8-dd2c-4c1b-b238-9081d2c22258 0f8fe087-f15b-4f31-8b3d-8dcce822939e NM_000132.3 -1 reviewed p.A406S 1.000 32 0% 121 43% 0 - benign(0.213) tolerated(0.16) neutral(0.081) superfamily_Cupredoxins