Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID transcript_name strand transcript_status amino_acid_change ucsc_cons normal_depth normal_vaf tumor_depth tumor_vaf rna_depth rna_vaf polyphen sift condel domain NOC2L 26155 genome.wustl.edu 37 1 892309 892309 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015658.3 -1 validated p.V151I 0.003 271 0% 435 26.2% 20 50% benign(0) tolerated(0.13) neutral(0.253) NULL C1orf159 54991 genome.wustl.edu 37 1 1018289 1018289 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_017891.4 -1 validated p.R194H 0.494 29 0% 38 36.8% 16 68.7% probably_damaging(0.994) deleterious(0) deleterious(0.897) NULL TMEM240 339453 genome.wustl.edu 37 1 1471136 1471136 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001114748.1 -1 validated p.S69L 1.000 30 0% 77 15.6% 1 0% probably_damaging(0.957) deleterious(0) deleterious(0.845) NULL SLC35E2 9906 genome.wustl.edu 37 1 1597457 1597457 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001110781.1 -1 validated p.V328I 1.000 42 0% 53 20.8% 9 22.2% probably_damaging(0.999) tolerated(0.07) deleterious(0.809) HMMPfam_TPT,superfamily_Multidrug resistance efflux transporter EmrE WRAP73 49856 genome.wustl.edu 37 1 3547542 3547542 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_017818.3 -1 reviewed p.T460 0.000 39 0% 39 23.1% 30 53.3% - - - NULL NPHP4 261734 genome.wustl.edu 37 1 5950973 5950973 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000466897 -1 known p.R113W 0.244 55 0% 50 18% 6 50% - - - NULL RNF207 388591 genome.wustl.edu 37 1 6272006 6272006 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_207396.2 +1 validated p.V397I 0.993 27 0% 27 18.5% 5 20% possibly_damaging(0.94) tolerated(0.2) neutral(0.434) NULL PLEKHG5 57449 genome.wustl.edu 37 1 6533313 6533313 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_198681.2 -1 reviewed p.R342W 0.958 45 0% 76 23.7% 10 80% probably_damaging(1) deleterious(0.02) deleterious(0.883) NULL PLEKHG5 57449 genome.wustl.edu 37 1 6556597 6556597 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_198681.2 -1 reviewed p.R34C 0.995 78 0% 132 21.2% 4 50% possibly_damaging(0.919) deleterious(0.02) deleterious(0.752) NULL KLHL21 9903 genome.wustl.edu 37 1 6653606 6653606 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014851.2 -1 provisional p.R538H 0.988 71 0% 94 31.9% 6 33.3% probably_damaging(0.998) tolerated(0.18) deleterious(0.530) HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain ERRFI1 54206 genome.wustl.edu 37 1 8075646 8075646 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018948.3 -1 validated p.R12G 0.035 214 0% 146 18.5% 4 75% probably_damaging(0.998) tolerated(0.33) deleterious(0.498) HMMPfam_GTPase_binding SLC45A1 50651 genome.wustl.edu 37 1 8390480 8390480 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001080397.1 +1 provisional p.P309 0.131 17 0% 40 30% 0 - - - - HMMPfam_MFS_1 RERE 473 genome.wustl.edu 37 1 8424243 8424243 + Missense_Mutation SNP T T A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001042681.1 -1 reviewed p.K538I 1.000 135 0% 165 20% 19 26.3% unknown(0) deleterious(0) - HMMPfam_GATA,HMMSmart_SM00401,superfamily_Glucocorticoid receptor-like (DNA-binding domain) PIK3CD 5293 genome.wustl.edu 37 1 9770571 9770571 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005026.3 +1 validated p.V20I 0.967 176 0% 186 21% 3 0% benign(0.012) tolerated(0.51) neutral(0.009) NULL PIK3CD 5293 genome.wustl.edu 37 1 9775990 9775990 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005026.3 +1 validated p.A152T 0.006 11 0% 16 37.5% 4 0% benign(0.01) tolerated(0.69) neutral(0.003) superfamily_SSF54236 PIK3CD 5293 genome.wustl.edu 37 1 9782591 9782591 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005026.3 +1 validated p.R785W 1.000 53 0% 87 19.5% 11 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,superfamily_Kinase_like,PatternScan_PI3_4_KINASE_1 C1orf127 148345 genome.wustl.edu 37 1 11015064 11015064 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000377008 -1 known p.G153R 0.000 128 0% 165 23.6% 0 - benign(0.012) tolerated(0.72) neutral(0.002) NULL PTCHD2 57540 genome.wustl.edu 37 1 11589626 11589626 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020780.1 +1 validated p.A938T 1.000 69 0% 98 27.6% 0 - possibly_damaging(0.822) deleterious(0) deleterious(0.756) HMMPfam_Patched ZBTB17 7709 genome.wustl.edu 37 1 16269071 16269071 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003443.2 -1 validated p.T664M 1.000 87 0% 112 26.8% 43 41.8% unknown(0) deleterious(0) - NULL CROCC 9696 genome.wustl.edu 37 1 17257068 17257068 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014675.3 +1 validated p.A276 0.003 43 0% 67 16.4% 1 0% - - - NULL PADI4 23569 genome.wustl.edu 37 1 17668843 17668843 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_012387.2 +1 reviewed p.A294V 0.995 89 0% 41 34.1% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_PAD,superfamily_Pentein IFFO2 126917 genome.wustl.edu 37 1 19236933 19236933 + Nonsense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001136265.1 -1 validated p.R451* 1.000 330 0% 290 26.6% 6 16.6% - - - HMMPfam_Filament PQLC2 54896 genome.wustl.edu 37 1 19655093 19655093 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001040125.1 +1 validated p.R278C 0.002 55 0% 59 18.6% 20 30% possibly_damaging(0.56) deleterious(0.05) deleterious(0.536) NULL UBXN10 127733 genome.wustl.edu 37 1 20517177 20517177 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_152376.3 +1 provisional p.S41 0.966 80 0% 56 26.8% 14 35.7% - - - NULL KIF17 57576 genome.wustl.edu 37 1 21024876 21024876 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020816.2 -1 validated p.R410Q 1.000 167 0% 189 20.1% 1 0% possibly_damaging(0.525) tolerated(0.13) neutral(0.429) NULL NR0B2 8431 genome.wustl.edu 37 1 27240140 27240140 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_021969.2 -1 reviewed p.L98F 0.992 28 0% 16 37.5% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Hormone_recep,HMMSmart_HOLI,superfamily_Str_ncl_receptor SLC9A1 6548 genome.wustl.edu 37 1 27440593 27440593 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003047.3 -1 validated p.L179 1.000 126 0% 109 21.1% 21 23.8% - - - HMMPfam_Na_H_Exchanger LOC440577 440577 genome.wustl.edu 37 1 27533589 27533589 + Silent SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 XM_496355.5 +1 model p.L53 0.997 17 0% 53 22.6% 0 - - - - HMMPfam_Nucleoplasmin,superfamily_Nucleoplasmin-like core domain AHDC1 27245 genome.wustl.edu 37 1 27874481 27874481 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001029882.2 -1 validated p.P1382 0.867 60 0% 70 27.1% 20 60% - - - NULL PTPRU 10076 genome.wustl.edu 37 1 29585171 29585171 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005704.3 +1 reviewed p.Y120 0.690 122 0% 170 18.8% 6 33.3% - - - HMMPfam_MAM,HMMSmart_SM00137 BAI2 576 genome.wustl.edu 37 1 32206051 32206051 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001703.2 -1 reviewed p.R629H 1.000 38 0% 54 35.2% 3 33.3% probably_damaging(0.973) tolerated(0.18) deleterious(0.471) NULL AK2 204 genome.wustl.edu 37 1 33480162 33480162 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001625.2 -1 reviewed p.H153 0.141 158 0% 79 35.4% 158 46.8% - - - "HMMPfam_ADK,HMMPfam_ADK_lid,superfamily_Microbial and mitochondrial ADK insert ""zinc finger"" domain,superfamily_P-loop containing nucleoside triphosphate hydrolases" CSMD2 114784 genome.wustl.edu 37 1 34181974 34181974 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_052896.3 -1 validated p.S1003 0.985 116 0% 86 26.7% 0 - - - - HMMSmart_SM00042,superfamily_Spermadhesin CUB domain KIAA0319L 79932 genome.wustl.edu 37 1 36020065 36020065 + Missense_Mutation SNP T T A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024874.4 -1 reviewed p.N10Y 0.130 67 0% 67 23.9% 13 7.6% benign(0.001) deleterious(0.02) neutral(0.383) NULL EIF2C4 192670 genome.wustl.edu 37 1 36291027 36291027 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_017629.2 +1 reviewed p.H140 0.997 340 0% 168 23.8% 2 50% - - - superfamily_PAZ domain CSF3R 1441 genome.wustl.edu 37 1 36932136 36932136 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_156039.2 -1 reviewed p.A805V 0.020 56 0% 77 32.5% 14 0% benign(0.132) tolerated(0.06) neutral(0.334) NULL MFSD2A 84879 genome.wustl.edu 37 1 40431685 40431685 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001136493.1 +1 validated p.T251M 1.000 101 0% 65 32.3% 10 20% probably_damaging(0.987) deleterious(0.02) deleterious(0.820) superfamily_MFS general substrate transporter KCNQ4 9132 genome.wustl.edu 37 1 41296858 41296858 + Silent SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000509682 +1 known p.K331E 0.004 43 0% 56 19.6% 0 - - - - HMMPfam_KCNQ_channel CCDC30 728621 genome.wustl.edu 37 1 43102988 43102988 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001080850.2 +1 validated p.R526Q 0.998 76 0% 40 25% 3 66.6% benign(0.035) tolerated(0.12) neutral(0.263) NULL C1orf210 149466 genome.wustl.edu 37 1 43748762 43748762 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_182517.2 -1 validated p.S12 0.000 52 0% 81 28.4% 15 46.6% - - - NULL PTCH2 8643 genome.wustl.edu 37 1 45293645 45293645 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003738.4 -1 reviewed p.R643Q 0.992 149 0% 179 25.7% 0 - probably_damaging(1) tolerated(0.25) deleterious(0.537) HMMPfam_Patched HECTD3 79654 genome.wustl.edu 37 1 45469223 45469223 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024602.5 -1 validated p.R843C 1.000 126 0% 108 25% 42 47.6% probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain LURAP1 541468 genome.wustl.edu 37 1 46685445 46685445 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001013615.2 +1 validated p.R91 0.844 102 0% 60 23.3% 6 16.6% - - - NULL RAB3B 5865 genome.wustl.edu 37 1 52442593 52442593 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002867.3 -1 validated p.R66H 1.000 147 0% 84 29.8% 0 - probably_damaging(0.999) deleterious(0.03) deleterious(0.855) HMMSmart_RAB,HMMPfam_Ras,superfamily_SSF52540 GLIS1 148979 genome.wustl.edu 37 1 53974885 53974885 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_147193.2 -1 validated p.A538V 0.009 69 0% 65 15.4% 1 0% benign(0) deleterious(0) neutral(0.445) NULL FAM151A 338094 genome.wustl.edu 37 1 55080444 55080444 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_176782.2 -1 validated p.R168 1.000 333 0% 259 23.9% 0 - - - - HMMPfam_DUF2181 USP24 23358 genome.wustl.edu 37 1 55591133 55591133 + Nonsense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015306.2 -1 validated p.R1114* 1.000 394 0% 235 22.6% 4 0% - - - NULL PDE4B 5142 genome.wustl.edu 37 1 66829176 66829176 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001037341.1 +1 reviewed p.D402 0.194 187 0% 38 21.1% 8 0% - - - superfamily_HD-domain/PDEase-like LRRC7 57554 genome.wustl.edu 37 1 70541780 70541780 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020794.2 +1 validated p.T1379 0.213 80 0% 63 39.7% 0 - - - - NULL COL24A1 255631 genome.wustl.edu 37 1 86453296 86453296 + Frame_Shift_Del DEL A A - novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_152890.5 -1 validated p.E785fs 0.999 - - - - - - - - - HMMPfam_Collagen LRRC8B 23507 genome.wustl.edu 37 1 90049657 90049657 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001134476.1 +1 validated p.A483V 1.000 48 0% 17 29.4% 1 100% benign(0.002) tolerated(0.21) neutral(0.044) superfamily_SSF52058 HFM1 164045 genome.wustl.edu 37 1 91843673 91843673 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001017975.3 -1 validated p.V435A 0.996 121 0% 28 39.3% 0 - benign(0.122) deleterious(0.02) neutral(0.393) HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases AHCYL1 10768 genome.wustl.edu 37 1 110561051 110561051 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006621.4 +1 validated p.V394I 1.000 152 0% 54 31.5% 68 48.5% benign(0.059) deleterious(0.04) neutral(0.353) HMMPfam_AdoHcyase,HMMPfam_AdoHcyase_NAD,superfamily_NAD(P)-binding Rossmann-fold domains,superfamily_Formate/glycerate dehydrogenase catalytic domain-like HBXIP 10542 genome.wustl.edu 37 1 110946541 110946541 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006402.2 -1 reviewed p.G154E 1.000 145 0% 125 22.4% 216 33.7% probably_damaging(1) tolerated(0.21) deleterious(0.544) NULL CHIA 27159 genome.wustl.edu 37 1 111854890 111854890 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_201653.2 +1 validated p.N45S 0.962 145 0% 54 16.7% 0 - benign(0) deleterious(0.04) neutral(0.349) HMMPfam_Glyco_hydro_18,HMMSmart_SM00636,superfamily_(Trans)glycosidases PTPN22 26191 genome.wustl.edu 37 1 114394680 114394680 + Missense_Mutation SNP C C A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015967.4 -1 reviewed p.R266L 1.000 189 0.5% 58 27.6% 4 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Y_phosphatase,HMMSmart_PTPc,superfamily_SSF52799 AP4B1 10717 genome.wustl.edu 37 1 114438930 114438930 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006594.2 -1 validated p.R487Q 1.000 145 0% 84 23.8% 22 22.7% probably_damaging(0.998) deleterious(0.02) deleterious(0.857) HMMPfam_Adaptin_N,superfamily_ARM-type_fold NBPF14 25832 genome.wustl.edu 37 1 148015651 148015651 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015383.1 -1 predicted p.R327H 0.003 297 0% 105 21.9% 0 - benign(0.066) tolerated(0.43) neutral(0.018) HMMPfam_DUF1220 FCGR1A 2209 genome.wustl.edu 37 1 149761756 149761756 + Missense_Mutation SNP C C A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000566.3 +1 reviewed p.L236M 0.171 260 0% 253 21.7% 14 0% probably_damaging(0.978) deleterious(0.02) deleterious(0.803) HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin PI4KB 5298 genome.wustl.edu 37 1 151271347 151271347 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002651.1 -1 provisional p.R663H 1.000 118 0% 67 28.4% 43 41.8% possibly_damaging(0.938) deleterious(0.01) deleterious(0.789) HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,superfamily_Protein kinase-like (PK-like) S100A11 6282 genome.wustl.edu 37 1 152006245 152006245 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005620.1 -1 reviewed p.R12Q 0.989 158 0% 129 28.7% 1742 47.8% benign(0.001) tolerated(0.4) neutral(0.016) HMMPfam_S_100,superfamily_SSF47473 TCHH 7062 genome.wustl.edu 37 1 152083770 152083772 + In_Frame_Del DEL CTC CTC - novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 CTC CTC Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_007113.2 -1 provisional p.E641in_frame_del 0.909:0.012:0.001 - - - - - - - - - NULL FLG 2312 genome.wustl.edu 37 1 152281622 152281622 + Nonsense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002016.1 -1 reviewed p.Q1914* 0.000 691 0.1% 466 21.9% 0 - - - - HMMPfam_Filaggrin LCE1D 353134 genome.wustl.edu 37 1 152770577 152770577 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_178352.2 +1 validated p.G103S 0.984 10 0% 24 62.5% 0 - unknown(0) - - NULL DENND4B 9909 genome.wustl.edu 37 1 153902844 153902844 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014856.2 -1 validated p.R1474W 1.000 153 0% 198 21.7% 14 21.4% probably_damaging(1) deleterious(0.01) deleterious(0.905) NULL CRTC2 200186 genome.wustl.edu 37 1 153924524 153924524 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_181715.1 -1 provisional p.M323V 1.000 89 0% 147 28.6% 23 39.1% benign(0.001) tolerated(0.39) neutral(0.016) NULL SHE 126669 genome.wustl.edu 37 1 154461761 154461761 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001010846.2 -1 validated p.A264T 0.991 91 0% 108 31.5% 0 - benign(0.055) deleterious(0.03) neutral(0.368) NULL TRIM46 80128 genome.wustl.edu 37 1 155156430 155156430 + Missense_Mutation SNP G G A rs139008733 by1000genomes TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_025058.3 +1 validated p.G682S 0.002 189 0% 253 35.6% 4 25% benign(0.328) tolerated(0.48) neutral(0.113) NULL GBA 2629 genome.wustl.edu 37 1 155209863 155209863 + Missense_Mutation SNP G G A rs190207858 by1000genomes TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000157.3 -1 reviewed p.R41C 0.047 57 0% 56 19.6% 36 58.3% possibly_damaging(0.675) deleterious(0.04) deleterious(0.589) HMMPfam_Glyco_hydro_30,superfamily_Glycosyl hydrolase domain LMNA 4000 genome.wustl.edu 37 1 156108510 156108510 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_170707.2 +1 reviewed p.R644C 1.000 24 0% 26 15.4% 67 19.4% probably_damaging(0.992) deleterious(0) deleterious(0.892) NULL RHBG 57127 genome.wustl.edu 37 1 156339063 156339063 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020407.3 +1 reviewed p.A8V 0.014 47 0% 68 16.2% 0 - benign(0) tolerated(0.16) neutral(0.059) NULL MEF2D 4209 genome.wustl.edu 37 1 156449104 156449104 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005920.2 -1 provisional p.N214 0.980 107 0% 91 27.5% 9 33.3% - - - NULL FCRL1 115350 genome.wustl.edu 37 1 157766913 157766913 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_052938.4 -1 reviewed p.L399P 0.000 154 0% 100 14% 0 - possibly_damaging(0.833) tolerated(0.23) neutral(0.359) NULL CD1A 909 genome.wustl.edu 37 1 158225118 158225118 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001763.2 +1 reviewed p.Y101 0.000 189 0% 86 20.9% 1 0% - - - HMMPfam_MHC_I,superfamily_MHC_I/II-like_Ag-recog ATP1A4 480 genome.wustl.edu 37 1 160144369 160144369 + Nonsense_Mutation SNP G G T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_144699.3 +1 reviewed p.G715* 1.000 271 0% 143 21.7% 0 - - - - HMMPfam_Hydrolase,superfamily_HAD-like,superfamily_Calcium ATPase transmembrane domain M NCSTN 23385 genome.wustl.edu 37 1 160324029 160324029 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015331.2 +1 reviewed p.R434Q 0.983 392 0% 221 26.2% 65 41.5% benign(0.41) tolerated(0.18) neutral(0.189) HMMPfam_Nicastrin,superfamily_Zn-dependent exopeptidases NCSTN 23385 genome.wustl.edu 37 1 160328005 160328005 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015331.2 +1 reviewed p.A692T 1.000 277 0% 143 16.8% 153 18.9% benign(0.021) tolerated(0.53) neutral(0.009) NULL B4GALT3 8703 genome.wustl.edu 37 1 161144908 161144908 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003779.2 -1 reviewed p.R122C 1.000 71 0% 89 27% 28 46.4% probably_damaging(0.999) deleterious(0.01) deleterious(0.896) HMMPfam_Galactosyl_T_2,superfamily_Nucleotide-diphospho-sugar transferases OLFML2B 25903 genome.wustl.edu 37 1 161993094 161993094 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015441.1 -1 provisional p.E43K 0.834 169 0% 167 26.3% 4 0% benign(0.002) deleterious(0.01) neutral(0.406) NULL ALDH9A1 223 genome.wustl.edu 37 1 165636557 165636557 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000696.3 -1 reviewed p.G446 0.281 178 0% 58 25.9% 61 36% - - - HMMPfam_Aldedh,superfamily_Aldehyde_DH/Histidinol_DH RCSD1 92241 genome.wustl.edu 37 1 167663515 167663515 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_052862.3 +1 validated p.G150 0.584 153 0% 74 35.1% 6 0% - - - NULL ATP1B1 481 genome.wustl.edu 37 1 169076069 169076069 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001677.3 +1 reviewed p.M1T 1.000 47 0% 60 28.3% 22 22.7% probably_damaging(0.99) deleterious(0) deleterious(0.886) HMMPfam_Na_K-ATPase C1orf105 92346 genome.wustl.edu 37 1 172414292 172414292 + Missense_Mutation SNP C C A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_139240.3 +1 validated p.P34H 0.689 198 0% 160 15.6% 0 - possibly_damaging(0.948) deleterious(0) deleterious(0.836) NULL RALGPS2 55103 genome.wustl.edu 37 1 178854313 178854313 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_152663.3 +1 validated p.H336R 1.000 95 0% 32 12.5% 4 0% benign(0.143) tolerated(0.37) neutral(0.032) NULL FAM20B 9917 genome.wustl.edu 37 1 179041204 179041204 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014864.3 +1 validated p.T385 0.955 176 0% 97 26.8% 7 42.8% - - - HMMPfam_DUF1193 KIAA1614 57710 genome.wustl.edu 37 1 180885793 180885793 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020950.1 +1 validated p.P185L 0.048 37 0% 62 21% 0 - possibly_damaging(0.873) tolerated(0.85) neutral(0.340) NULL NMNAT2 23057 genome.wustl.edu 37 1 183262858 183262858 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015039.2 -1 reviewed p.H52 1.000 157 0% 106 27.4% 0 - - - - HMMPfam_CTP_transf_2,superfamily_Nucleotidylyl transferase HMCN1 83872 genome.wustl.edu 37 1 186057112 186057112 + Missense_Mutation SNP C C T rs187753126 by1000genomes TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_031935.2 +1 reviewed p.R3138W 1.000 243 0% 91 27.5% 0 - probably_damaging(0.998) deleterious(0.01) deleterious(0.880) HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin TPR 7175 genome.wustl.edu 37 1 186326599 186326599 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003292.2 -1 reviewed p.R552C 1.000 291 0% 142 28.2% 4 0% possibly_damaging(0.853) deleterious(0) deleterious(0.773) NULL ZBTB41 360023 genome.wustl.edu 37 1 197157461 197157461 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_194314.2 -1 validated p.R503W 0.998 112 0% 43 16.3% 2 0% probably_damaging(1) deleterious(0) deleterious(0.945) PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers ZBTB41 360023 genome.wustl.edu 37 1 197169288 197169288 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_194314.2 -1 validated p.V106I 0.920 105 0% 129 23.3% 0 - benign(0.415) deleterious(0) deleterious(0.579) HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB LHX9 56956 genome.wustl.edu 37 1 197890459 197890459 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020204.2 +1 reviewed p.R135C 1.000 94 0% 93 16.1% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_LIM,HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,superfamily_Glucocorticoid receptor-like (DNA-binding domain) CACNA1S 779 genome.wustl.edu 37 1 201054601 201054601 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000069.2 -1 reviewed p.T371 0.014 289 0% 188 24.5% 0 - - - - superfamily_SSF81324 PKP1 5317 genome.wustl.edu 37 1 201294880 201294880 + Splice_Site SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000299.2 +1 reviewed e13-2 0.413 74 0% 66 12.1% 0 - - - - - PPP1R12B 4660 genome.wustl.edu 37 1 202544200 202544200 + Missense_Mutation SNP C C A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_032105.2 +1 reviewed p.A978D 1.000 108 0% 52 28.8% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) NULL LEMD1 93273 genome.wustl.edu 37 1 205350915 205350915 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001001552.3 -1 validated p.R92Q 0.000 524 0% 244 30.7% 2 100% possibly_damaging(0.526) tolerated(0.49) neutral(0.188) NULL C1orf186 440712 genome.wustl.edu 37 1 206241647 206241647 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000331555 -1 known p.A48T 0.000 149 0% 62 33.9% 72 26.3% benign(0) deleterious(0) neutral(0.445) NULL IL10 3586 genome.wustl.edu 37 1 206943174 206943174 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000572.2 -1 reviewed p.K148 1.000 194 0% 76 18.4% 0 - - - - superfamily_4-helical cytokines,HMMPfam_IL10,HMMSmart_SM00188 LAMB3 3914 genome.wustl.edu 37 1 209791824 209791824 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000228.2 -1 reviewed p.R961Q 1.000 122 0% 86 29.1% 216 44.4% benign(0.036) deleterious(0) neutral(0.447) NULL DIEXF 27042 genome.wustl.edu 37 1 210016949 210016949 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014388.5 +1 validated p.T645 0.000 115 0% 39 38.5% 4 0% - - - HMMPfam_DUF1253 PTPN14 5784 genome.wustl.edu 37 1 214542938 214542938 + Nonsense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005401.4 -1 reviewed p.R1045* 1.000 279 0% 130 26.2% 3 0% - - - HMMPfam_Y_phosphatase,HMMSmart_PTPc,superfamily_SSF52799 HHIPL2 79802 genome.wustl.edu 37 1 222695958 222695958 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024746.3 -1 validated p.G720 0.004 147 0% 79 27.8% 2 0% - - - NULL HHIPL2 79802 genome.wustl.edu 37 1 222715455 222715455 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024746.3 -1 validated p.G339 0.506 164 0% 89 23.6% 0 - - - - superfamily_Quino_gluc_DH TLR5 7100 genome.wustl.edu 37 1 223285784 223285784 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003268.5 -1 reviewed p.T197M 0.000 117 0% 139 25.9% 1 100% benign(0.005) tolerated(0.25) neutral(0.037) superfamily_SSF52058 MIXL1 83881 genome.wustl.edu 37 1 226413370 226413370 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_031944.1 +1 provisional p.E186K 0.000 127 0% 204 26% 0 - benign(0.002) tolerated(0.25) neutral(0.037) NULL ITPKB 3707 genome.wustl.edu 37 1 226924876 226924884 + In_Frame_Del DEL CTGCCGCTG CTGCCGCTG - rs147889095 byCluster;by1000genomes TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 CTGCCGCTG CTGCCGCTG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002221.3 -1 reviewed p.GSS94in_frame_del 0.902:0.650:0.630:0.440:0.081:0.083:0.088:0.089:0.091 - - - - - - - - - NULL WNT3A 89780 genome.wustl.edu 37 1 228210497 228210497 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_033131.2 +1 reviewed p.A67 0.030 66 0% 85 21.2% 0 - - - - HMMPfam_wnt,HMMSmart_WNT1 C1orf35 79169 genome.wustl.edu 37 1 228289093 228289093 + Missense_Mutation SNP G G T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024319.2 -1 provisional p.D205E 0.180 240 0.4% 380 15.8% 17 35.2% benign(0.376) tolerated(0.8) neutral(0.120) NULL TRIM17 51127 genome.wustl.edu 37 1 228602524 228602524 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001024940.2 -1 reviewed p.A84T 1.000 54 0% 73 27.4% 16 37.5% possibly_damaging(0.612) tolerated(0.66) neutral(0.214) superfamily_SSF57850 AGT 183 genome.wustl.edu 37 1 230846279 230846279 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000029.3 -1 reviewed p.V106 0.058 211 2.4% 192 28.1% 1 0% - - - HMMPfam_Serpin,superfamily_Serpins NID1 4811 genome.wustl.edu 37 1 236175268 236175268 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002508.2 -1 reviewed p.Q827R 1.000 172 0% 81 18.5% 6 0% benign(0.002) tolerated(0.79) neutral(0.001) PatternScan_ASX_HYDROXYL,superfamily_Thyroglobulin type-1 domain,HMMSmart_SM00179,HMMSmart_SM00181,PatternScan_EGF_2,HMMPfam_EGF_CA ZNF692 55657 genome.wustl.edu 37 1 249151595 249151595 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001136036.1 -1 provisional p.G110S 0.090 118 0% 190 23.2% 6 33.3% benign(0.007) tolerated(0.14) neutral(0.249) NULL FAM150B 285016 genome.wustl.edu 37 2 286179 286179 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001002919.2 -1 validated p.C111Y 1.000 382 0% 542 18.6% 2 0% probably_damaging(0.998) deleterious(0) deleterious(0.919) NULL MYT1L 23040 genome.wustl.edu 37 2 1812925 1812925 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015025.2 -1 validated p.P1030L 1.000 151 0% 150 28% 0 - probably_damaging(0.98) deleterious(0) deleterious(0.869) HMMPfam_zf-C2HC,superfamily_SSF103637 COLEC11 78989 genome.wustl.edu 37 2 3691339 3691339 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024027.3 +1 validated p.T149 0.889 56 0% 86 29.1% 7 42.8% - - - HMMSmart_SM00034,superfamily_C-type lectin-like LPIN1 23175 genome.wustl.edu 37 2 11944578 11944578 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_145693.1 +1 reviewed p.N645 0.840 145 0% 82 23.2% 2 0% - - - NULL OTOF 9381 genome.wustl.edu 37 2 26698903 26698903 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_194248.2 -1 reviewed p.K957R 1.000 77 0% 114 22.8% 0 - probably_damaging(0.965) tolerated(0.77) neutral(0.408) superfamily_C2 domain (Calcium/lipid-binding domain CaLB) KCNK3 3777 genome.wustl.edu 37 2 26950775 26950775 + Missense_Mutation SNP C C G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002246.2 +1 reviewed p.A175G 1.000 80 0% 138 32.6% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Ion_trans_2,superfamily_Voltage-gated potassium channels EMILIN1 11117 genome.wustl.edu 37 2 27306765 27306765 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_007046.3 +1 reviewed p.L776 0.981 32 0% 48 29.2% 8 0% - - - NULL CAD 790 genome.wustl.edu 37 2 27465263 27465263 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004341.3 +1 reviewed p.R2064C 1.000 61 0% 81 24.7% 22 40.9% probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_Asp/Orn_carbamoyltranf,HMMPfam_OTCace_N SUPT7L 9913 genome.wustl.edu 37 2 27878346 27878346 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014860.1 -1 provisional p.E290K 1.000 224 0% 110 20.9% 24 33.3% benign(0.03) deleterious(0.05) neutral(0.347) NULL CLIP4 79745 genome.wustl.edu 37 2 29366644 29366644 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024692.4 +1 validated p.A240T 1.000 137 0% 27 37% 3 33.3% benign(0.072) tolerated(0.24) neutral(0.042) superfamily_Ankyrin repeat CRIM1 51232 genome.wustl.edu 37 2 36764577 36764577 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_016441.1 +1 provisional p.C837 1.000 120 0% 55 20% 15 13.3% - - - HMMPfam_VWC,HMMSmart_VWC,PatternScan_VWFC_1 THADA 63892 genome.wustl.edu 37 2 43655303 43655303 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001083953.1 -1 validated p.A1332T 1.000 195 0% 76 27.6% 17 29.4% benign(0.004) tolerated(0.09) neutral(0.296) NULL SPTBN1 6711 genome.wustl.edu 37 2 54873541 54873541 + Missense_Mutation SNP T T G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003128.2 +1 reviewed p.F1599V 1.000 49 0% 24 37.5% 34 35.2% possibly_damaging(0.508) tolerated(0.1) neutral(0.457) HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat EML6 400954 genome.wustl.edu 37 2 55096450 55096450 + Silent SNP C C T rs183857870 by1000genomes TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001039753.2 +1 validated p.D728 0.991 216 0% 55 36.4% 0 - - - - HMMSmart_SM00320,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase CCDC88A 55704 genome.wustl.edu 37 2 55549716 55549716 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001135597.1 -1 validated p.T1036M 1.000 135 0% 56 19.6% 0 - probably_damaging(0.958) tolerated(0.11) deleterious(0.673) NULL MDH1 4190 genome.wustl.edu 37 2 63822607 63822607 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005917.2 +1 reviewed p.D51 0.008 278 0% 130 24.6% 101 40.5% - - - HMMPfam_Ldh_1_N,superfamily_NAD(P)-binding Rossmann-fold domains SPRED2 200734 genome.wustl.edu 37 2 65540994 65540994 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_181784.2 -1 validated p.R300W 1.000 19 0% 33 21.2% 7 42.8% probably_damaging(0.996) deleterious(0.01) deleterious(0.867) NULL AAK1 22848 genome.wustl.edu 37 2 69741756 69741756 + Silent SNP T T C rs55712143 TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014911.3 -1 reviewed p.Q541 0.988 150 16.7% 73 20.5% 0 - - - - NULL EXOC6B 23233 genome.wustl.edu 37 2 72406493 72406493 + Nonsense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015189.1 -1 validated p.R803* 1.000 418 0% 123 16.3% 4 0% - - - HMMPfam_Sec15 DCTN1 1639 genome.wustl.edu 37 2 74588705 74588705 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004082.3 -1 reviewed p.A1253V 0.914 224 0% 118 15.3% 155 20.6% benign(0.077) tolerated(0.09) neutral(0.302) NULL DCTN1 1639 genome.wustl.edu 37 2 74590133 74590133 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004082.3 -1 reviewed p.R1173C 0.229 355 0.6% 236 22% 126 48.4% possibly_damaging(0.946) deleterious(0.04) deleterious(0.739) NULL HK2 3099 genome.wustl.edu 37 2 75117942 75117942 + Silent SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000189.4 +1 reviewed p.H876 0.997 268 0% 158 19.6% 11 45.4% - - - HMMPfam_Hexokinase_2,superfamily_SSF53067 MRPL19 9801 genome.wustl.edu 37 2 75881867 75881867 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014763.3 +1 reviewed p.E161K 1.000 151 0.7% 82 19.5% 32 50% probably_damaging(1) deleterious(0.01) deleterious(0.905) NULL LRRTM4 80059 genome.wustl.edu 37 2 77745596 77745596 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001134745.1 -1 validated p.R467W 1.000 135 0% 44 29.5% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) NULL REG3A 5068 genome.wustl.edu 37 2 79385536 79385536 + Silent SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002580.1 -1 reviewed p.A83 0.066 355 0% 148 21.6% 0 - - - - HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like SH2D6 284948 genome.wustl.edu 37 2 85663600 85663600 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_198482.1 +1 provisional p.S141 0.289 98 0% 90 25.6% 0 - - - - HMMPfam_SH2,HMMSmart_SM00252,superfamily_SH2 domain EIF2AK3 9451 genome.wustl.edu 37 2 88888279 88888279 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004836.5 -1 reviewed p.H436Y 1.000 181 0.6% 53 26.4% 2 50% probably_damaging(0.994) tolerated(0.1) deleterious(0.738) NULL CNGA3 1261 genome.wustl.edu 37 2 99013409 99013409 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001298.2 +1 reviewed p.P592 0.000 75 0% 43 27.9% 0 - - - - HMMPfam_cNMP_binding,HMMSmart_cNMP,superfamily_cNMP_binding UNC50 25972 genome.wustl.edu 37 2 99227329 99227329 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014044.5 +1 validated p.G124 0.425 648 0% 619 27.3% 43 44.1% - - - HMMPfam_UNC-50 C2orf55 343990 genome.wustl.edu 37 2 99438545 99438545 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_207362.2 -1 validated p.G731R 0.013 43 0% 52 32.7% 13 61.5% unknown(0) deleterious(0.02) - NULL IL1RL2 8808 genome.wustl.edu 37 2 102818167 102818167 + Missense_Mutation SNP T T A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003854.2 +1 reviewed p.V214E 0.038 179 0% 84 13.1% 0 - probably_damaging(0.988) deleterious(0.01) deleterious(0.843) HMMSmart_IG,superfamily_SSF48726 POU3F3 5455 genome.wustl.edu 37 2 105473129 105473129 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006236.1 +1 provisional p.A387 1.000 77 0% 144 16.7% 0 - - - - HMMPfam_Pou,HMMSmart_POU,superfamily_Lambda_like_DNA SULT1C2 6819 genome.wustl.edu 37 2 108910712 108910712 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_176825.2 +1 reviewed p.D60G 1.000 212 0% 81 30.9% 13 46.1% probably_damaging(0.999) tolerated(0.06) deleterious(0.813) HMMPfam_Sulfotransfer_1,superfamily_P-loop containing nucleoside triphosphate hydrolases BCL2L11 10018 genome.wustl.edu 37 2 111907692 111907692 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_138621.3 +1 reviewed p.G156R 0.993 218 0% 99 22.2% 6 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Bclx_interact MARCO 8685 genome.wustl.edu 37 2 119750796 119750796 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006770.3 +1 reviewed p.E450G 0.000 245 0% 90 32.2% 7 14.2% benign(0.005) - - HMMPfam_SRCR,PatternScan_SRCR_1,HMMSmart_SM00202,superfamily_SRCR-like PCDP1 200373 genome.wustl.edu 37 2 120369301 120369301 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001029996.3 +1 validated p.V146I 0.000 147 0% 64 26.6% 3 33.3% benign(0) tolerated(0.39) neutral(0.016) NULL BIN1 274 genome.wustl.edu 37 2 127816725 127816725 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_139343.1 -1 reviewed p.N288 0.972 123 0% 179 11.7% 95 6.3% - - - NULL POTEF 728378 genome.wustl.edu 37 2 130877793 130877793 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001099771.2 -1 validated p.G99D 0.186 374 0% 494 14.2% 0 - possibly_damaging(0.872) deleterious(0) deleterious(0.784) NULL TMEM163 81615 genome.wustl.edu 37 2 135308175 135308175 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_030923.4 -1 validated p.A142T 0.998 205 0% 71 31% 0 - probably_damaging(0.996) tolerated(0.28) deleterious(0.493) NULL RAB3GAP1 22930 genome.wustl.edu 37 2 135881801 135881801 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_012233.2 +1 reviewed p.C272Y 1.000 335 0% 235 13.2% 20 0% possibly_damaging(0.915) deleterious(0.01) deleterious(0.772) NULL LCT 3938 genome.wustl.edu 37 2 136567447 136567447 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002299.2 -1 reviewed p.D824N 1.000 188 0% 168 27.4% 0 - benign(0.007) tolerated(0.09) neutral(0.296) HMMPfam_Glyco_hydro_1,superfamily_Glyco_hydro_cat LRP1B 53353 genome.wustl.edu 37 2 141291607 141291607 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018557.2 -1 validated p.D2582G 1.000 199 0% 57 21.1% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_Ldl_recept_a,HMMSmart_LDLa,PatternScan_LDLRA_1,superfamily_LDL_rcpt_classA_cys-rich,superfamily_SSF63825 ZEB2 9839 genome.wustl.edu 37 2 145161518 145161518 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014795.3 -1 reviewed p.R258W 1.000 477 0% 179 24.6% 2 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 CACNB4 785 genome.wustl.edu 37 2 152698528 152698528 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000726.3 -1 reviewed p.A397 0.021 217 0% 77 24.7% 0 - - - - HMMPfam_Ca_channel_B,HMMSmart_SM00072,superfamily_P-loop containing nucleoside triphosphate hydrolases PKP4 8502 genome.wustl.edu 37 2 159481904 159481904 + Missense_Mutation SNP A A C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003628.3 +1 reviewed p.E373A 1.000 101 0% 32 28.1% 19 52.6% probably_damaging(0.965) tolerated(0.57) neutral(0.413) NULL FIGN 55137 genome.wustl.edu 37 2 164467699 164467699 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018086.2 -1 validated p.H215Y 1.000 305 0% 104 15.4% 0 - possibly_damaging(0.602) deleterious(0.01) deleterious(0.614) NULL GRB14 2888 genome.wustl.edu 37 2 165353908 165353908 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004490.2 -1 reviewed p.A399 0.229 102 0% 45 24.4% 11 27.2% - - - HMMPfam_BPS SCN2A 6326 genome.wustl.edu 37 2 166245201 166245201 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001040142.1 +1 reviewed p.R1629C 1.000 313 0% 98 25.5% 0 - probably_damaging(0.998) deleterious(0) deleterious(0.919) HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels SCN2A 6326 genome.wustl.edu 37 2 166245867 166245867 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001040142.1 +1 reviewed p.R1851W 1.000 224 0.9% 62 24.2% 1 100% probably_damaging(1) deleterious(0) deleterious(0.945) NULL FASTKD1 79675 genome.wustl.edu 37 2 170413751 170413751 + Missense_Mutation SNP G G A rs141705162 by1000genomes TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024622.3 -1 validated p.A343V 0.945 168 0% 136 22.8% 7 28.5% benign(0.243) tolerated(0.68) neutral(0.027) NULL NFE2L2 4780 genome.wustl.edu 37 2 178095985 178095985 + Missense_Mutation SNP C C T rs181294188 by1000genomes TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006164.3 -1 validated p.R449H 1.000 234 0% 125 20.8% 81 29.6% probably_damaging(0.999) tolerated(0.26) deleterious(0.524) NULL TTN 7273 genome.wustl.edu 37 2 179446301 179446301 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000356127 -1 known p.V19662M 0.998 246 0% 59 23.7% 0 - probably_damaging(0.964) - - HMMPfam_fn3,HMMSmart_SM00060 TTN 7273 genome.wustl.edu 37 2 179457213 179457213 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000356127 -1 known p.S17270N 1.000 353 0% 96 25% 0 - benign(0.29) - - HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set TTN 7273 genome.wustl.edu 37 2 179569984 179569984 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000356127 -1 known p.M8597V 0.999 150 0% 113 21.2% 0 - unknown(0) - - NULL COL5A2 1290 genome.wustl.edu 37 2 189923153 189923153 + Splice_Site SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000393.3 -1 reviewed e33+2 1.000 250 0% 74 36.5% 0 - - - - - MYO1B 4430 genome.wustl.edu 37 2 192255112 192255112 + Nonsense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001130158.1 +1 validated p.R626* 1.000 154 0% 114 23.7% 20 0% - - - HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases HECW2 57520 genome.wustl.edu 37 2 197122583 197122583 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020760.1 -1 provisional p.R1128H 1.000 117 0% 36 27.8% 0 - probably_damaging(1) deleterious(0.01) deleterious(0.905) NULL HECW2 57520 genome.wustl.edu 37 2 197183615 197183615 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020760.1 -1 provisional p.R667W 0.307 101 0% 53 20.8% 0 - probably_damaging(0.994) deleterious(0) deleterious(0.897) NULL CASP10 843 genome.wustl.edu 37 2 202050825 202050825 + Nonsense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_032977.3 +1 reviewed p.R109* 0.000 69 1.4% 29 31% 2 0% - - - superfamily_DEATH_like MPP4 58538 genome.wustl.edu 37 2 202557653 202557653 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_033066.2 -1 reviewed p.P60L 0.990 159 0% 44 18.2% 0 - probably_damaging(0.971) deleterious(0.01) deleterious(0.819) HMMSmart_SM00569 CD28 940 genome.wustl.edu 37 2 204591705 204591705 + Silent SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006139.2 +1 validated p.H134 0.248 93 0% 35 37.1% 0 - - - - superfamily_Immunoglobulin NDUFS1 4719 genome.wustl.edu 37 2 207007417 207007417 + Nonsense_Mutation SNP C C A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005006.5 -1 reviewed p.G376* 1.000 93 0% 61 32.8% 10 10% - - - HMMPfam_Molybdopterin,superfamily_SSF53706 UNC80 285175 genome.wustl.edu 37 2 210835673 210835673 + Nonsense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_032504.1 +1 validated p.Q2684* 1.000 569 0% 153 18.3% 0 - - - - NULL FN1 2335 genome.wustl.edu 37 2 216232746 216232746 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000357009 -1 known p.T2029M 0.003 135 0% 59 22% 174 7.4% benign(0.007) - - NULL SLC11A1 6556 genome.wustl.edu 37 2 219252582 219252582 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000578.3 +1 reviewed p.C233 0.397 51 0% 50 26% 6 0% - - - HMMPfam_Nramp CTDSP1 58190 genome.wustl.edu 37 2 219268081 219268081 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_021198.1 +1 provisional p.R200W 0.042 143 0% 208 27.4% 66 37.8% probably_damaging(0.993) deleterious(0.01) deleterious(0.856) HMMPfam_NIF,HMMSmart_CPDc,superfamily_SSF56784 VIL1 7429 genome.wustl.edu 37 2 219296874 219296874 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_007127.2 +1 reviewed p.E437K 0.036 169 0% 115 20.9% 0 - benign(0.002) tolerated(0.05) neutral(0.345) HMMSmart_GEL,HMMPfam_Gelsolin,superfamily_SSF55753,superfamily_SSF82754 VIL1 7429 genome.wustl.edu 37 2 219297669 219297669 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_007127.2 +1 reviewed p.Y499H 1.000 147 0% 98 14.3% 1 0% probably_damaging(0.978) tolerated(0.28) neutral(0.452) superfamily_SSF55753 ZNF142 7701 genome.wustl.edu 37 2 219509197 219509197 + Missense_Mutation SNP C C A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001105537.1 -1 validated p.G681V 0.056 46 0% 45 31.1% 4 75% possibly_damaging(0.81) deleterious(0.02) deleterious(0.688) NULL CYP27A1 1593 genome.wustl.edu 37 2 219679181 219679181 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000784.3 +1 reviewed p.N421 0.038 132 0% 119 24.4% 37 29.7% - - - HMMPfam_p450,superfamily_Cytochrome P450 CNPPD1 27013 genome.wustl.edu 37 2 220037334 220037334 + Missense_Mutation SNP G G T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015680.4 -1 validated p.L403I 1.000 205 0% 234 19.2% 58 27.5% probably_damaging(0.971) tolerated(0.41) neutral(0.428) NULL ABCB6 10058 genome.wustl.edu 37 2 220074742 220074742 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005689.1 -1 reviewed p.G816E 1.000 293 0% 388 26% 41 46.3% probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases ATG9A 79065 genome.wustl.edu 37 2 220089083 220089083 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001077198.1 -1 validated p.R337H 1.000 52 0% 74 28.4% 31 9.6% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_APG9 TUBA4A 7277 genome.wustl.edu 37 2 220115760 220115760 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006000.1 -1 reviewed p.R221C 1.000 434 0% 635 22.8% 34 29.4% possibly_damaging(0.834) deleterious(0) deleterious(0.762) HMMPfam_Tubulin,superfamily_Tubulin nucleotide-binding domain-like DES 1674 genome.wustl.edu 37 2 220285589 220285589 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001927.3 +1 reviewed p.A313T 0.994 149 0% 168 33.3% 5 0% benign(0.103) deleterious(0) neutral(0.453) superfamily_Prefoldin,HMMPfam_Filament OBSL1 23363 genome.wustl.edu 37 2 220432976 220432976 + Silent SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015311.2 -1 reviewed p.E361 1.000 61 1.6% 68 26.5% 38 47.3% - - - HMMSmart_IG,HMMPfam_ig,superfamily_SSF48726 DGKD 8527 genome.wustl.edu 37 2 234350564 234350564 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_152879.2 +1 reviewed p.R373W 1.000 555 0% 569 16% 1 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_DAGK_cat,HMMSmart_SM00046 TRPM8 79054 genome.wustl.edu 37 2 234835299 234835299 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024080.4 +1 validated p.S39 0.372 225 0% 78 21.8% 0 - - - - NULL SH3BP4 23677 genome.wustl.edu 37 2 235943659 235943659 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014521.2 +1 reviewed p.R5W 1.000 86 0% 86 26.7% 18 44.4% probably_damaging(1) deleterious(0) deleterious(0.945) NULL CNTN4 152330 genome.wustl.edu 37 3 3072567 3072567 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_175607.1 +1 reviewed p.R564Q 1.000 254 0% 67 28.4% 0 - probably_damaging(1) deleterious(0.04) deleterious(0.849) HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin TRNT1 51095 genome.wustl.edu 37 3 3179046 3179046 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_182916.2 +1 validated p.A84V 1.000 179 0% 132 17.4% 10 10% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_PolyA_pol,superfamily_Nucleotidyltransferase BRPF1 7862 genome.wustl.edu 37 3 9781555 9781555 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001003694.1 +1 reviewed p.R491Q 1.000 130 0.8% 170 14.7% 9 33.3% possibly_damaging(0.827) deleterious(0.02) deleterious(0.697) NULL RPUSD3 285367 genome.wustl.edu 37 3 9879867 9879867 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_173659.3 -1 validated p.R297C 0.095 99 0% 99 24.2% 37 32.4% probably_damaging(0.999) deleterious(0.02) deleterious(0.873) superfamily_Pseudouridine synthase BRK1 55845 genome.wustl.edu 37 3 10167367 10167367 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018462.4 +1 validated p.R59Q 1.000 226 0% 169 25.4% 247 31.9% benign(0.155) deleterious(0) neutral(0.458) NULL TATDN2 9797 genome.wustl.edu 37 3 10291111 10291111 + Missense_Mutation SNP G G A rs193243038 by1000genomes TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014760.3 +1 validated p.R76H 0.024 27 0% 41 31.7% 9 11.1% probably_damaging(0.994) tolerated(0.23) deleterious(0.493) NULL TAMM41 132001 genome.wustl.edu 37 3 11850997 11850997 + Nonsense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_138807.2 -1 provisional p.R290* 0.768 240 0.4% 132 23.5% 8 25% - - - HMMPfam_Mmp37 TAMM41 132001 genome.wustl.edu 37 3 11871317 11871317 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_138807.2 -1 provisional p.E145K 1.000 129 0% 79 20.3% 8 50% probably_damaging(0.956) tolerated(0.21) neutral(0.444) HMMPfam_Mmp37 GRIP2 80852 genome.wustl.edu 37 3 14564550 14564550 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001080423.1 -1 provisional p.P272S 1.000 63 0% 48 12.5% 0 - - - - HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like FGD5 152273 genome.wustl.edu 37 3 14863095 14863095 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000457774 +1 known p.R53C 0.011 49 0% 73 23.3% 15 20% - - - NULL BTD 686 genome.wustl.edu 37 3 15686516 15686516 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000060.2 +1 reviewed p.K385E 0.002 119 0% 49 22.4% 2 100% benign(0.001) tolerated(0.9) - NULL SLC4A7 9497 genome.wustl.edu 37 3 27477999 27477999 + Nonsense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003615.3 -1 validated p.R148* 1.000 122 0% 39 25.6% 0 - - - - HMMPfam_Band_3_cyto,superfamily_Phoshotransferase/anion transport protein ZNF860 344787 genome.wustl.edu 37 3 32032364 32032364 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001137674.1 +1 provisional p.D598G 0.614 144 0% 162 17.3% 2 50% benign(0.205) deleterious(0.01) neutral(0.426) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 DYNC1LI1 51143 genome.wustl.edu 37 3 32586494 32586494 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_016141.2 -1 validated p.L148 1.000 193 0% 99 26.3% 19 21% - - - HMMPfam_DLIC,superfamily_P-loop containing nucleoside triphosphate hydrolases CLASP2 23122 genome.wustl.edu 37 3 33648915 33648915 + Missense_Mutation SNP A A T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015097.1 -1 validated p.I496N 1.000 129 0% 69 14.5% 1 100% probably_damaging(0.971) deleterious(0) deleterious(0.857) superfamily_ARM repeat PDCD6IP 10015 genome.wustl.edu 37 3 33840424 33840424 + Silent SNP C C A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_013374.4 +1 validated p.L68 0.752 17 0% 19 31.6% 13 46.1% - - - HMMPfam_BRO1 ITGA9 3680 genome.wustl.edu 37 3 37514890 37514890 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002207.2 +1 reviewed p.R120H 0.998 94 0% 49 22.4% 3 33.3% probably_damaging(1) deleterious(0.01) deleterious(0.905) superfamily_SSF69318 TTC21A 199223 genome.wustl.edu 37 3 39170717 39170717 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001105513.2 +1 validated p.S692F 1.000 140 0% 73 28.8% 0 - benign(0.031) deleterious(0) neutral(0.446) superfamily_TPR-like RPL14 9045 genome.wustl.edu 37 3 40503520 40503521 + In_Frame_Ins INS - - CTGCTGCTG rs61749576 byFrequency TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001034996.1 +1 reviewed p.153in_frame_insAAA 0.019:0.022 - - - - - - - - - NULL CDCP1 64866 genome.wustl.edu 37 3 45127511 45127511 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_022842.3 -1 reviewed p.N710 0.121 165 0% 75 30.7% 16 31.2% - - - NULL PTH1R 5745 genome.wustl.edu 37 3 46943235 46943235 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000313063 +1 known p.A630T 0.039 95 0% 127 29.9% 0 - benign(0.047) tolerated(0.19) neutral(0.053) HMMPfam_7tm_2 SHISA5 51246 genome.wustl.edu 37 3 48511234 48511234 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_016479.3 -1 validated p.A108V 0.052 113 0% 118 28.8% 268 40.6% possibly_damaging(0.942) deleterious(0.03) deleterious(0.752) NULL COL7A1 1294 genome.wustl.edu 37 3 48615778 48615778 + Silent SNP G G A rs2854404 TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000094.3 -1 reviewed p.G1836 1.000 311 0% 284 23.9% 1 0% - - - HMMPfam_Collagen CELSR3 1951 genome.wustl.edu 37 3 48677851 48677851 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001407.2 -1 reviewed p.T3056M 0.987 31 0% 26 19.2% 0 - probably_damaging(0.977) deleterious(0) deleterious(0.863) NULL CACNA2D2 9254 genome.wustl.edu 37 3 50417156 50417156 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001005505.1 -1 reviewed p.S331 1.000 154 0.6% 143 27.3% 1 0% - - - HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like CACNA2D2 9254 genome.wustl.edu 37 3 50513566 50513566 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001005505.1 -1 reviewed p.V91I 0.968 98 0% 88 13.6% 0 - benign(0.19) tolerated(0.49) neutral(0.028) NULL ENSG00000173366 0 genome.wustl.edu 37 3 52258302 52258302 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000494383 -1 known p.A164T 0.168 82 0% 91 25.3% 0 - - - - HMMSmart_SM00102,superfamily_L domain-like DNAH1 25981 genome.wustl.edu 37 3 52394358 52394358 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015512.4 +1 validated p.R1535C 1.000 293 0% 339 21.2% 1 0% probably_damaging(0.993) deleterious(0.01) deleterious(0.856) superfamily_P-loop containing nucleoside triphosphate hydrolases DNAH1 25981 genome.wustl.edu 37 3 52418872 52418872 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015512.4 +1 validated p.R2798H 1.000 149 0% 195 14.4% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_P-loop containing nucleoside triphosphate hydrolases BAP1 8314 genome.wustl.edu 37 3 52437677 52437677 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004656.2 -1 reviewed p.T495M 1.000 92 0% 114 22.8% 20 60% probably_damaging(1) deleterious(0) deleterious(0.945) NULL SEMA3G 56920 genome.wustl.edu 37 3 52476906 52476906 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020163.1 -1 provisional p.R45C 1.000 177 0% 207 33.3% 1 100% probably_damaging(1) tolerated(0.07) deleterious(0.819) superfamily_Sema STAB1 23166 genome.wustl.edu 37 3 52547929 52547929 + Missense_Mutation SNP G G A rs2286786 byCluster;by1000genomes TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015136.2 +1 reviewed p.G1127S 0.000 174 0% 219 25.1% 7 0% benign(0) tolerated(0.98) - NULL CACNA1D 776 genome.wustl.edu 37 3 53757544 53757544 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000720.2 +1 validated p.V604I 1.000 566 0% 385 26% 0 - probably_damaging(0.99) tolerated(0.18) deleterious(0.497) HMMPfam_Ion_trans,superfamily_SSF81324 CACNA2D3 55799 genome.wustl.edu 37 3 54930881 54930881 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018398.2 +1 reviewed p.S784 0.002 241 0% 91 26.4% 1 0% - - - NULL CACNA2D3 55799 genome.wustl.edu 37 3 55108166 55108166 + Missense_Mutation SNP C C T rs186910104 by1000genomes TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018398.2 +1 reviewed p.A1070V 0.507 354 0% 106 21.7% 5 60% benign(0.006) tolerated(0.06) neutral(0.323) NULL DNAH12 201625 genome.wustl.edu 37 3 57443720 57443720 + Missense_Mutation SNP A A C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_178504.4 -1 validated p.L999V 1.000 64 0% 94 26.6% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_DHC_N2 ABHD6 57406 genome.wustl.edu 37 3 58260449 58260449 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020676.5 +1 validated p.A196 0.000 106 0% 40 22.5% 7 42.8% - - - HMMPfam_Abhydrolase_1,superfamily_SSF53474 PXK 54899 genome.wustl.edu 37 3 58382767 58382767 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_017771.3 +1 provisional p.V275A 0.653 201 0% 106 28.3% 2 100% benign(0) tolerated(1) - superfamily_Protein kinase-like (PK-like) CADPS 8618 genome.wustl.edu 37 3 62477973 62477973 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003716.3 -1 reviewed p.R959H 1.000 183 0% 89 27% 1 0% probably_damaging(0.996) deleterious(0.01) deleterious(0.867) NULL CADPS 8618 genome.wustl.edu 37 3 62570925 62570925 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003716.3 -1 reviewed p.P504 0.000 663 0% 235 32.3% 0 - - - - NULL C3orf64 285203 genome.wustl.edu 37 3 69056969 69056969 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_173654.1 -1 provisional p.T105 0.002 72 0% 65 20% 5 20% - - - NULL ROBO2 6092 genome.wustl.edu 37 3 77651546 77651546 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002942.3 +1 reviewed p.D1014N 1.000 327 0.3% 167 31.7% 18 44.4% possibly_damaging(0.894) deleterious(0.01) deleterious(0.758) NULL CPOX 1371 genome.wustl.edu 37 3 98309560 98309560 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000097.5 -1 reviewed p.V243M 0.997 234 0% 216 16.2% 11 45.4% possibly_damaging(0.809) deleterious(0) deleterious(0.749) HMMPfam_Coprogen_oxidas,superfamily_Coprogen_oxidas ATG3 64422 genome.wustl.edu 37 3 112256681 112256681 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_022488.3 -1 provisional p.G189 1.000 178 0% 52 23.1% 52 28.8% - - - NULL KIAA2018 205717 genome.wustl.edu 37 3 113377243 113377243 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001009899.2 -1 validated p.R1096C 1.000 198 0% 63 19% 1 0% benign(0.148) deleterious(0) neutral(0.458) NULL C3orf30 152405 genome.wustl.edu 37 3 118866132 118866132 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_152539.2 +1 validated p.R366C 0.000 133 0% 84 22.6% 2 50% possibly_damaging(0.633) tolerated(0.08) deleterious(0.521) NULL ARHGAP31 57514 genome.wustl.edu 37 3 119121096 119121096 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020754.2 +1 reviewed p.S499 0.604 63 0% 42 23.8% 1 0% - - - NULL HCLS1 3059 genome.wustl.edu 37 3 121353085 121353085 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005335.4 -1 validated p.P291L 0.018 150 0% 70 24.3% 86 34.8% probably_damaging(0.991) deleterious(0.05) deleterious(0.789) NULL KALRN 8997 genome.wustl.edu 37 3 123988076 123988076 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001024660.3 +1 reviewed p.R313W 1.000 22 0% 15 33.3% 2 100% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat COPG1 22820 genome.wustl.edu 37 3 128973560 128973560 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_016128.3 +1 validated p.V125M 1.000 122 0% 101 30.7% 81 43.2% possibly_damaging(0.768) deleterious(0) deleterious(0.730) HMMPfam_Adaptin_N,superfamily_ARM repeat IFT122 55764 genome.wustl.edu 37 3 129183537 129183537 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_052985.2 +1 reviewed p.R210Q 0.995 240 0.4% 111 16.2% 6 33.3% probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMSmart_SM00320,superfamily_WD40 repeat-like RHO 6010 genome.wustl.edu 37 3 129251378 129251378 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000539.3 +1 reviewed p.A233 0.049 170 0% 185 21.1% 0 - - - - HMMPfam_7tm_1,superfamily_SSF81321 BFSP2 8419 genome.wustl.edu 37 3 133119387 133119387 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003571.2 +1 reviewed p.R154W 0.678 18 0% 36 25% 0 - probably_damaging(0.997) tolerated(0.19) deleterious(0.516) HMMPfam_Filament TOPBP1 11073 genome.wustl.edu 37 3 133342208 133342208 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_007027.3 -1 reviewed p.R1008W 0.001 208 0% 91 29.7% 4 25% probably_damaging(0.986) deleterious(0.04) deleterious(0.783) superfamily_BRCT domain AMOTL2 51421 genome.wustl.edu 37 3 134080535 134080535 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_016201.2 -1 reviewed p.A465V 0.995 20 0% 20 25% 13 23% probably_damaging(0.995) deleterious(0.01) deleterious(0.863) NULL CPB1 1360 genome.wustl.edu 37 3 148558743 148558743 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001871.2 +1 reviewed p.R152H 0.985 235 0.4% 78 30.8% 3 66.6% probably_damaging(0.995) deleterious(0) deleterious(0.902) HMMPfam_Peptidase_M14,HMMSmart_SM00631,superfamily_Zn-dependent exopeptidases BCHE 590 genome.wustl.edu 37 3 165548799 165548799 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000055.2 -1 reviewed p.I8T 0.000 54 0% 14 28.6% 0 - benign(0) tolerated(0.23) neutral(0.042) NULL MYNN 55892 genome.wustl.edu 37 3 169498450 169498450 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018657.3 +1 provisional p.R378H 1.000 201 0% 100 33% 12 33.3% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers PHC3 80012 genome.wustl.edu 37 3 169867013 169867013 + Missense_Mutation SNP G G T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024947.3 -1 validated p.P145H 1.000 237 0% 105 9.5% 12 8.3% probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL PIK3CA 5290 genome.wustl.edu 37 3 178916891 178916891 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006218.2 +1 reviewed p.R93Q 1.000 76 1.3% 58 25.9% 1 0% probably_damaging(0.999) tolerated(0.24) deleterious(0.528) HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B PIK3CA 5290 genome.wustl.edu 37 3 178921548 178921548 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006218.2 +1 reviewed p.V344M 1.000 39 0% 39 30.8% 4 0% probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMSmart_C2,HMMSmart_PI3K_C2,superfamily_C2_CaLB PIK3CA 5290 genome.wustl.edu 37 3 178952086 178952086 + Missense_Mutation SNP T T A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006218.2 +1 reviewed p.H1047Q 0.722 174 0% 32 34.4% 3 33.3% probably_damaging(0.964) deleterious(0.03) deleterious(0.771) HMMSmart_PI3Kc,superfamily_Kinase_like ZNF639 51193 genome.wustl.edu 37 3 179051071 179051071 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_016331.1 +1 provisional p.I107V 0.662 34 0% 58 17.2% 12 25% benign(0) tolerated(0.91) - NULL YEATS2 55689 genome.wustl.edu 37 3 183490341 183490341 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018023.4 +1 validated p.S732 1.000 82 0% 51 27.5% 4 50% - - - NULL DVL3 1857 genome.wustl.edu 37 3 183881485 183881485 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004423.3 +1 reviewed p.P68S 1.000 305 0% 368 26.9% 13 30.7% benign(0.024) deleterious(0) neutral(0.446) HMMPfam_DIX,HMMSmart_DAX CLCN2 1181 genome.wustl.edu 37 3 184064584 184064584 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004366.4 -1 reviewed p.R836Q 1.000 116 0% 142 33.1% 7 0% possibly_damaging(0.872) tolerated(0.27) neutral(0.373) HMMPfam_CBS,superfamily_CBS-domain AHSG 197 genome.wustl.edu 37 3 186338451 186338451 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001622.2 +1 reviewed p.P279L 0.000 86 0% 49 20.4% 0 - benign(0) tolerated(0.22) neutral(0.042) NULL IL1RAP 3556 genome.wustl.edu 37 3 190326882 190326904 + Frame_Shift_Del DEL ATATAGAATATGGCATTCAGAGG ATATAGAATATGGCATTCAGAGG - novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 ATATAGAATATGGCATTCAGAGG ATATAGAATATGGCATTCAGAGG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002182.3 +1 reviewed p.I151fs 0.183:0.057:0.002:0.247:0.264:0.831:0.829:0.512:0.005:0.008:0.000:0.002:0.001:0.000:0.001:0.287:0.309:0.596:0.600:0.328:0.125:0.007:0.008 - - - - - - - - - HMMSmart_SM00409,superfamily_Immunoglobulin MUC4 4585 genome.wustl.edu 37 3 195512220 195512220 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018406.5 -1 reviewed p.H2077 0.669 1101 0% 1619 9.7% 2 0% - - - NULL PCYT1A 5130 genome.wustl.edu 37 3 195956929 195956929 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000419333 -1 known p.E367K 1.000 134 0% 134 26.1% 15 80% benign(0) tolerated(0.51) neutral(0.009) NULL UBXN7 26043 genome.wustl.edu 37 3 196083675 196083675 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015562.1 -1 validated p.R451C 1.000 265 0% 136 20.6% 1 0% probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMPfam_UBX,HMMSmart_SM00166,superfamily_Ubiquitin-like FGFRL1 53834 genome.wustl.edu 37 4 1016144 1016144 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001004356.2 +1 reviewed p.R78H 0.996 38 0% 48 14.6% 4 100% possibly_damaging(0.637) tolerated(0.09) deleterious(0.519) HMMSmart_IGc2,HMMPfam_I-set,superfamily_SSF48726 WHSC1 7468 genome.wustl.edu 37 4 1918615 1918615 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001042424.2 +1 reviewed p.R260C 1.000 118 0% 59 27.1% 2 0% probably_damaging(0.998) deleterious(0) deleterious(0.919) HMMPfam_PWWP,HMMSmart_SM00293,superfamily_Tudor/PWWP/MBT ZFYVE28 57732 genome.wustl.edu 37 4 2306025 2306025 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020972.2 -1 validated p.S681L 0.001 24 0% 43 34.9% 5 40% benign(0) tolerated(0.13) neutral(0.253) NULL SH3TC1 54436 genome.wustl.edu 37 4 8217960 8217960 + Missense_Mutation SNP C C A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018986.3 +1 validated p.H202N 0.055 107 0% 152 24.3% 5 0% possibly_damaging(0.926) tolerated(0.07) deleterious(0.694) NULL ZNF518B 85460 genome.wustl.edu 37 4 10444984 10444984 + Missense_Mutation SNP A A T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_053042.2 -1 validated p.V990E 0.003 296 0% 159 14.5% 4 25% benign(0.085) tolerated(0.06) neutral(0.329) NULL ZNF518B 85460 genome.wustl.edu 37 4 10445094 10445094 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_053042.2 -1 validated p.S953 0.007 240 0% 95 29.5% 3 33.3% - - - NULL SLIT2 9353 genome.wustl.edu 37 4 20597382 20597384 + In_Frame_Del DEL ACA ACA - novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 ACA ACA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004787.1 +1 provisional p.N1083in_frame_del 1.000:0.774:0.992 - - - - - - - - - HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181,PatternScan_EGF_CA,superfamily_EGF/Laminin C4orf52 389203 genome.wustl.edu 37 4 25929958 25929958 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001145432.1 +1 validated p.A45T 1.000 162 0% 98 27.6% 37 40.5% possibly_damaging(0.842) tolerated(0.44) neutral(0.335) NULL ARAP2 116984 genome.wustl.edu 37 4 36214067 36214067 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015230.2 -1 reviewed p.L362F 0.026 319 0% 106 21.7% 3 33.3% benign(0.079) tolerated(0.05) neutral(0.351) NULL C4orf19 55286 genome.wustl.edu 37 4 37592462 37592462 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001104629.1 +1 validated p.H262R 0.000 143 0% 94 26.6% 28 17.8% possibly_damaging(0.776) tolerated(0.31) neutral(0.317) NULL TMEM156 80008 genome.wustl.edu 37 4 39000433 39000433 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024943.1 -1 provisional p.Q62R 0.907 126 0% 61 27.9% 0 - benign(0.004) tolerated(0.1) neutral(0.286) NULL SLC10A4 201780 genome.wustl.edu 37 4 48490832 48490832 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_152679.3 +1 validated p.D397G 0.887 80 0% 189 24.9% 0 - benign(0.009) tolerated(0.08) neutral(0.300) NULL USP46 64854 genome.wustl.edu 37 4 53468044 53468044 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_022832.3 -1 validated p.A300V 1.000 219 0% 69 24.6% 9 55.5% probably_damaging(0.987) deleterious(0) deleterious(0.881) HMMPfam_UCH,PatternScan_UCH_2_2,superfamily_Cysteine proteinases TMPRSS11D 9407 genome.wustl.edu 37 4 68699023 68699023 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004262.2 -1 reviewed p.S197 0.361 128 0% 38 23.7% 2 0% - - - HMMPfam_Trypsin,HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys YTHDC1 91746 genome.wustl.edu 37 4 69189940 69189940 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001031732.2 -1 validated p.R451C 1.000 130 0% 33 33.3% 18 27.7% unknown(0) tolerated(0.09) - HMMPfam_YTH SLC4A4 8671 genome.wustl.edu 37 4 72306364 72306364 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001134742.1 +1 reviewed p.R280H 0.997 538 0% 148 31.1% 1 0% probably_damaging(0.994) deleterious(0.05) deleterious(0.797) HMMPfam_Band_3_cyto,superfamily_PTrfase/Anion_transptr NUP54 53371 genome.wustl.edu 37 4 77051862 77051862 + Nonsense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_017426.2 -1 reviewed p.R335* 0.992 133 0% 67 23.9% 10 10% - - - NULL GK2 2712 genome.wustl.edu 37 4 80328865 80328865 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_033214.2 -1 validated p.V164I 0.488 284 0% 223 25.6% 0 - benign(0.047) tolerated(0.09) neutral(0.299) HMMPfam_FGGY_N,superfamily_SSF53067 WDFY3 23001 genome.wustl.edu 37 4 85731274 85731274 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014991.4 -1 reviewed p.H704R 1.000 134 0% 31 22.6% 1 0% benign(0.026) tolerated(0.21) neutral(0.045) superfamily_ARM repeat ARHGAP24 83478 genome.wustl.edu 37 4 86921730 86921730 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001025616.2 +1 validated p.M701T 1.000 91 0% 56 17.9% 4 25% possibly_damaging(0.7) deleterious(0) deleterious(0.696) NULL PTPN13 5783 genome.wustl.edu 37 4 87687592 87687592 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_080685.2 +1 reviewed p.R1422 0.965 310 0% 66 18.2% 0 - - - - HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ IBSP 3381 genome.wustl.edu 37 4 88732877 88732877 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004967.3 +1 reviewed p.V257I 0.000 134 0.7% 80 36.2% 0 - benign(0.051) tolerated(0.28) neutral(0.035) HMMPfam_BSP_II LEF1 51176 genome.wustl.edu 37 4 109000748 109000748 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_016269.4 -1 reviewed p.G249S 1.000 534 0% 494 28.9% 2 50% benign(0.049) tolerated(0.71) neutral(0.005) NULL AGXT2L1 64850 genome.wustl.edu 37 4 109677584 109677584 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_031279.3 -1 validated p.T134A 1.000 157 0% 120 20% 0 - benign(0.026) tolerated(0.33) neutral(0.025) HMMPfam_Aminotran_3,superfamily_PLP-dependent transferases PITX2 5308 genome.wustl.edu 37 4 111543595 111543595 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000325.5 -1 reviewed p.L8F 1.000 46 0% 48 14.6% 0 - probably_damaging(0.998) deleterious(0) deleterious(0.919) NULL ARSJ 79642 genome.wustl.edu 37 4 114899941 114899941 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024590.3 -1 validated p.A17V 0.126 47 0% 56 19.6% 2 50% benign(0.01) deleterious(0.03) neutral(0.365) NULL SEC24D 9871 genome.wustl.edu 37 4 119652625 119652625 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014822.2 -1 reviewed p.A905V 0.986 180 0% 71 28.2% 45 46.6% benign(0.089) tolerated(0.17) neutral(0.066) HMMPfam_Gelsolin,superfamily_C-terminal gelsolin-like domain of Sec23/24 ANKRD50 57182 genome.wustl.edu 37 4 125591640 125591640 + Nonsense_Mutation SNP A A T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020337.2 -1 validated p.L931* 0.815 120 0% 44 29.5% 1 0% - - - HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK LARP1B 55132 genome.wustl.edu 37 4 129131184 129131184 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018078.2 +1 reviewed p.P907 0.983 145 0% 115 21.7% 0 - - - - NULL PCDH18 54510 genome.wustl.edu 37 4 138449703 138449703 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_019035.3 -1 reviewed p.D890G 1.000 203 0% 76 22.4% 3 33.3% benign(0.032) tolerated(0.45) neutral(0.013) NULL SETD7 80854 genome.wustl.edu 37 4 140432984 140432984 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_030648.2 -1 validated p.R312C 1.000 83 0% 26 15.4% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_SET,HMMSmart_SM00317,superfamily_SET domain GRIA2 2891 genome.wustl.edu 37 4 158234027 158234027 + Missense_Mutation SNP G G T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000826.3 +1 reviewed p.Q222H 1.000 71 0% 29 31% 13 100% probably_damaging(0.987) tolerated(0.07) deleterious(0.756) HMMPfam_ANF_receptor,superfamily_SSF53822 FAM198B 51313 genome.wustl.edu 37 4 159076918 159076918 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001128424.1 -1 validated p.T324A 0.747 164 0% 57 22.8% 12 0% benign(0.044) tolerated(0.44) neutral(0.015) NULL SH3RF1 57630 genome.wustl.edu 37 4 170190191 170190191 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020870.3 -1 reviewed p.S58L 1.000 96 0% 102 21.6% 9 44.4% benign(0) tolerated(0.28) neutral(0.032) superfamily_RING/U-box ASB5 140458 genome.wustl.edu 37 4 177136806 177136806 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_080874.2 -1 reviewed p.L312P 1.000 265 0% 86 11.6% 0 - probably_damaging(1) tolerated(0.28) deleterious(0.531) HMMPfam_SOCS_box ODZ3 55714 genome.wustl.edu 37 4 183675791 183675791 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001080477.1 +1 provisional p.K1424R 1.000 131 0% 91 35.2% 0 - benign(0.006) tolerated(0.81) neutral(0.001) superfamily_ConA_like_lec_gl,superfamily_SSF101898,superfamily_SSF63829 MLF1IP 79682 genome.wustl.edu 37 4 185652122 185652122 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024629.3 -1 validated p.G16 0.127 93 0% 178 24.2% 3 33.3% - - - NULL FAT1 2195 genome.wustl.edu 37 4 187527259 187527259 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005245.3 -1 reviewed p.V3439I 0.000 241 0% 112 28.6% 14 42.8% benign(0.005) tolerated(0.72) neutral(0.002) superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like AHRR 57491 genome.wustl.edu 37 5 434213 434213 + Missense_Mutation SNP C C A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020731.3 +1 reviewed p.P475Q 0.000 41 0% 53 22.6% 0 - benign(0.284) tolerated(0.2) neutral(0.136) NULL SLC9A3 6550 genome.wustl.edu 37 5 476772 476772 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004174.2 -1 validated p.S592 0.142 50 0% 80 23.7% 1 100% - - - NULL KIAA0947 23379 genome.wustl.edu 37 5 5462905 5462905 + Missense_Mutation SNP C C T rs142087337 by1000genomes TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015325.1 +1 validated p.T1153M 0.995 225 0% 106 25.5% 3 66.6% probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL UBE2QL1 134111 genome.wustl.edu 37 5 6491409 6491409 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001145161.1 +1 provisional p.V145M 1.000 124 0% 72 19.4% 2 0% probably_damaging(1) deleterious(0.04) deleterious(0.849) HMMPfam_UQ_con,HMMSmart_UBCc,superfamily_UBQ-conjugat/RWD-like PAPD7 11044 genome.wustl.edu 37 5 6754919 6754919 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006999.4 +1 reviewed p.G497D 0.197 36 0% 44 27.3% 7 42.8% benign(0.029) deleterious(0.01) neutral(0.407) NULL CTNND2 1501 genome.wustl.edu 37 5 11159793 11159793 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001332.2 -1 validated p.A685V 0.996 359 0% 93 24.7% 4 25% possibly_damaging(0.636) tolerated(0.06) deleterious(0.545) HMMSmart_SM00185,superfamily_ARM repeat CDH6 1004 genome.wustl.edu 37 5 31323144 31323144 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004932.2 +1 reviewed p.R701Q 1.000 133 0.8% 65 16.9% 9 33.3% probably_damaging(0.999) tolerated(0.08) deleterious(0.790) HMMPfam_Cadherin_C ADAMTS12 81792 genome.wustl.edu 37 5 33662041 33662041 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_030955.2 -1 reviewed p.D340 1.000 376 0% 82 32.9% 0 - - - - "HMMPfam_Reprolysin,superfamily_Metalloproteases (""zincins"") catalytic domain" IL7R 3575 genome.wustl.edu 37 5 35876450 35876450 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002185.2 +1 reviewed p.T414 0.000 186 0% 56 21.4% 3 0% - - - NULL NADKD1 133686 genome.wustl.edu 37 5 36219756 36219756 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001085411.1 -1 validated p.V196I 1.000 137 0% 59 30.5% 7 28.5% probably_damaging(0.965) tolerated(0.06) deleterious(0.730) superfamily_NAD kinase (Pfam 01513) NIPBL 25836 genome.wustl.edu 37 5 37052613 37052613 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_133433.3 +1 reviewed p.R2403H 1.000 175 0% 67 31.3% 23 4.3% probably_damaging(1) deleterious(0.01) deleterious(0.905) superfamily_ARM repeat LIFR 3977 genome.wustl.edu 37 5 38511953 38511953 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001127671.1 -1 reviewed p.D225 0.011 152 0.7% 32 25% 0 - - - - NULL DAB2 1601 genome.wustl.edu 37 5 39377259 39377259 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001343.2 -1 validated p.V544I 0.000 115 0% 53 34% 18 5.5% benign(0) tolerated(0.14) neutral(0.249) NULL HEATR7B2 133558 genome.wustl.edu 37 5 41018039 41018039 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_173489.4 -1 validated p.G933R 0.675 118 0% 50 30% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_ARM repeat PLCXD3 345557 genome.wustl.edu 37 5 41382519 41382519 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001005473.2 -1 validated p.R74Q 1.000 72 0% 25 20% 0 - benign(0.209) tolerated(0.47) neutral(0.032) superfamily_PLC-like_Pdiesterase_TIM-brl PAIP1 10605 genome.wustl.edu 37 5 43527495 43527495 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006451.4 -1 reviewed p.R475C 1.000 190 0% 243 24.7% 91 41.7% possibly_damaging(0.891) deleterious(0.03) deleterious(0.715) NULL SNX18 112574 genome.wustl.edu 37 5 53814691 53814691 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_052870.2 +1 reviewed p.T303 1.000 82 0% 118 22.9% 8 50% - - - HMMPfam_PX,HMMSmart_SM00312,superfamily_PX domain SNX18 112574 genome.wustl.edu 37 5 53839092 53839092 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001102575.1 +1 reviewed p.R569C 1.000 208 0.5% 111 29.7% 7 28.5% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_BAR_3_WASP_bdg LOC345645 345645 genome.wustl.edu 37 5 55572009 55572009 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 XM_002342506.1 -1 model p.S136 1.000 26 0% 44 27.3% 0 - - - - NULL C5orf44 80006 genome.wustl.edu 37 5 64956625 64956625 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001093755.1 +1 validated p.G266 0.998 198 0.5% 70 22.9% 9 0% - - - HMMPfam_DUF974 MAP1B 4131 genome.wustl.edu 37 5 71492660 71492660 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005909.3 +1 validated p.V1160I 0.836 124 0% 53 26.4% 0 - unknown(0) tolerated(0.25) - NULL ZNF366 167465 genome.wustl.edu 37 5 71756473 71756473 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_152625.1 -1 provisional p.T284M 0.000 133 0% 142 29.6% 1 0% benign(0.03) deleterious(0.05) neutral(0.347) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers GFM2 84340 genome.wustl.edu 37 5 74028873 74028873 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_032380.3 -1 reviewed p.V521M 1.000 175 0% 56 16.1% 13 38.4% probably_damaging(0.992) deleterious(0) deleterious(0.892) superfamily_EF-G C-terminal domain-like SV2C 22987 genome.wustl.edu 37 5 75428011 75428011 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014979.1 +1 provisional p.G146S 1.000 523 0% 120 32.5% 0 - possibly_damaging(0.861) deleterious(0.03) deleterious(0.698) superfamily_MFS_gen_substrate_transporter AGGF1 55109 genome.wustl.edu 37 5 76358892 76358892 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018046.3 +1 validated p.R654W 0.962 140 0% 71 22.5% 15 53.3% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_G-patch,HMMSmart_SM00443 BHMT 635 genome.wustl.edu 37 5 78415122 78415122 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001713.2 +1 reviewed p.N69 0.988 155 0% 107 35.5% 0 - - - - HMMPfam_S-methyl_trans,superfamily_S_methyl_trans MSH3 4437 genome.wustl.edu 37 5 80150106 80150106 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002439.3 +1 reviewed p.Y991H 1.000 134 0% 42 19% 9 33.3% possibly_damaging(0.655) tolerated(0.32) neutral(0.255) HMMPfam_MutS_V,HMMSmart_SM00534,superfamily_P-loop containing nucleoside triphosphate hydrolases MCC 4163 genome.wustl.edu 37 5 112439958 112439958 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001085377.1 -1 reviewed p.S374 0.006 158 0% 54 22.2% 0 - - - - NULL TICAM2 353376 genome.wustl.edu 37 5 114916629 114916629 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_021649.5 -1 validated p.G109R 0.936 252 0% 147 24.5% 5 80% probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_TIR DMXL1 1657 genome.wustl.edu 37 5 118539073 118539073 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005509.4 +1 validated p.E2602G 1.000 145 0.7% 64 21.9% 2 50% probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_WD40 repeat-like ACSL6 23305 genome.wustl.edu 37 5 131308493 131308493 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001009185.1 -1 validated p.R421H 1.000 133 0% 68 29.4% 0 - benign(0.21) tolerated(0.19) neutral(0.070) superfamily_SSF56801 AFF4 27125 genome.wustl.edu 37 5 132269930 132269930 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014423.3 -1 validated p.S276N 1.000 446 0% 218 21.6% 6 16.6% probably_damaging(0.987) tolerated(1) neutral(0.436) HMMPfam_AF-4 TCF7 6932 genome.wustl.edu 37 5 133479302 133479302 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003202.3 +1 validated p.S349L 0.970 90 0% 71 25.4% 4 0% benign(0.074) deleterious(0.03) neutral(0.369) superfamily_HMG-box H2AFY 9555 genome.wustl.edu 37 5 134670675 134670675 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_138610.2 -1 reviewed p.D370 0.934 190 0% 119 21% 312 43.2% - - - NULL HSPA9 3313 genome.wustl.edu 37 5 137903249 137903249 + Missense_Mutation SNP G G T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004134.6 -1 reviewed p.A204D 1.000 154 0% 146 21.2% 55 45.4% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_HSP70,superfamily_SSF53067 SIL1 64374 genome.wustl.edu 37 5 138286898 138286898 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001037633.1 -1 reviewed p.R331C 1.000 59 0% 37 24.3% 92 46.7% probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_ARM-type_fold ANKHD1-EIF4EBP3 404734 genome.wustl.edu 37 5 139885338 139885338 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020690.4 +1 reviewed p.A1098T 1.000 267 0% 111 20.7% 7 14.2% probably_damaging(0.991) tolerated(0.08) deleterious(0.744) HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK HARS2 23438 genome.wustl.edu 37 5 140077641 140077641 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_012208.2 +1 reviewed p.R480H 1.000 214 0% 165 24.8% 18 61.1% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_HGTP_anticodon,superfamily_Anticodon_bd PCDHA3 56145 genome.wustl.edu 37 5 140182165 140182165 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018906.2 +1 reviewed p.T461 0.833 175 0% 268 28% 0 - - - - HMMPfam_Cadherin,superfamily_Cadherin-like PCDHA4 56144 genome.wustl.edu 37 5 140188703 140188703 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018907.2 +1 reviewed p.R644H 0.013 112 0% 206 22.8% 0 - possibly_damaging(0.485) deleterious(0.03) deleterious(0.525) HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like PCDHA9 9752 genome.wustl.edu 37 5 140229709 140229709 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_031857.1 +1 reviewed p.P543 0.316 47 0% 68 54.4% 0 - - - - HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like PCDHA12 56137 genome.wustl.edu 37 5 140256905 140256905 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018903.2 +1 reviewed p.V616 0.000 301 0% 606 27.9% 1 0% - - - HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like PCDHB4 56131 genome.wustl.edu 37 5 140503711 140503711 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018938.2 +1 reviewed p.R711W 0.001 60 0% 126 25.4% 9 0% probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL PCDHB10 56126 genome.wustl.edu 37 5 140574261 140574261 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018930.3 +1 reviewed p.A712 0.000 59 0% 143 35% 9 22.2% - - - NULL PCDHB12 56124 genome.wustl.edu 37 5 140589075 140589075 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018932.3 +1 reviewed p.A199V 0.001 176 0% 400 27.8% 0 - benign(0.001) tolerated(0.11) neutral(0.272) HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin PCDHGA3 56112 genome.wustl.edu 37 5 140723745 140723745 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018916.3 +1 reviewed p.A49T 0.989 61 0% 102 12.7% 0 - benign(0.015) deleterious(0.02) neutral(0.384) HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like PCDHGA3 56112 genome.wustl.edu 37 5 140723837 140723837 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018916.3 +1 reviewed p.P79 0.002 45 0% 117 23.1% 0 - - - - HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like PCDHGB2 56103 genome.wustl.edu 37 5 140739909 140739909 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018923.2 +1 reviewed p.S69 0.020 70 0% 123 35.8% 0 - - - - HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like PCDHGA5 56110 genome.wustl.edu 37 5 140744697 140744697 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018918.2 +1 reviewed p.T267M 0.938 47 0% 108 10.2% 0 - probably_damaging(0.995) deleterious(0.02) deleterious(0.841) HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like PCDHGA5 56110 genome.wustl.edu 37 5 140745886 140745886 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018918.2 +1 reviewed p.A663 0.013 90 0% 169 16.6% 1 0% - - - HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like PCDHGA11 56105 genome.wustl.edu 37 5 140802950 140802950 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018914.2 +1 reviewed p.R719H 0.150 165 0% 282 26.2% 3 0% possibly_damaging(0.496) tolerated(0.13) neutral(0.418) NULL RELL2 285613 genome.wustl.edu 37 5 141019613 141019613 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001130029.1 +1 validated p.G210 0.009 22 0% 44 20.5% 1 0% - - - NULL NR3C1 2908 genome.wustl.edu 37 5 142779763 142779763 + Silent SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001024094.1 -1 reviewed p.R214 0.986 94 0% 158 21.5% 3 0% - - - HMMPfam_GCR AFAP1L1 134265 genome.wustl.edu 37 5 148695476 148695476 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_152406.2 +1 validated p.H371 0.172 98 0% 92 22.8% 3 0% - - - NULL NDST1 3340 genome.wustl.edu 37 5 149915419 149915419 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001543.4 +1 validated p.R470H 1.000 69 0% 81 21% 10 20% probably_damaging(0.995) tolerated(0.06) deleterious(0.780) NULL LSM11 134353 genome.wustl.edu 37 5 157178402 157178402 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_173491.2 +1 provisional p.H151 0.310 145 0% 103 11.7% 1 0% - - - NULL GABRB2 2561 genome.wustl.edu 37 5 160763741 160763741 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_021911.2 -1 reviewed p.R193C 1.000 134 0% 75 32% 0 - probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMPfam_Neur_chan_LBD,superfamily_Neur_chan_LBD WWC1 23286 genome.wustl.edu 37 5 167835561 167835561 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015238.2 +1 reviewed p.S257L 0.998 114 0% 36 19.4% 31 22.5% benign(0.188) deleterious(0.05) neutral(0.363) NULL SLIT3 6586 genome.wustl.edu 37 5 168244395 168244395 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003062.2 -1 validated p.T235A 0.361 129 0.8% 61 16.4% 2 0% benign(0.023) tolerated(0.79) neutral(0.002) HMMSmart_SM00082,superfamily_L domain-like STK10 6793 genome.wustl.edu 37 5 171509422 171509422 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005990.3 -1 reviewed p.V633M 0.001 204 0% 185 18.9% 10 20% benign(0.394) tolerated(0.25) neutral(0.164) NULL NKX2-5 1482 genome.wustl.edu 37 5 172661927 172661927 + Nonsense_Mutation SNP C C A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004387.3 -1 reviewed p.E54* 1.000 15 0% 22 31.8% 0 - - - - NULL DRD1 1812 genome.wustl.edu 37 5 174868816 174868816 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000794.3 -1 reviewed p.D429 0.127 402 0% 403 27.5% 0 - - - - NULL FGFR4 2264 genome.wustl.edu 37 5 176520336 176520336 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_022963.2 +1 reviewed p.T354I 0.650 38 0% 65 13.8% 0 - benign(0.099) tolerated(0.27) neutral(0.041) NULL LMAN2 10960 genome.wustl.edu 37 5 176761349 176761349 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006816.2 -1 reviewed p.P282 0.014 153 0% 106 14.2% 343 23.9% - - - NULL DBN1 1627 genome.wustl.edu 37 5 176887655 176887655 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_080881.2 -1 reviewed p.S276L 0.751 330 0% 535 23% 122 45.9% probably_damaging(0.998) deleterious(0) deleterious(0.919) NULL DBN1 1627 genome.wustl.edu 37 5 176894494 176894494 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_080881.2 -1 reviewed p.N157 0.759 56 0% 95 21.1% 78 46.1% - - - NULL B4GALT7 11285 genome.wustl.edu 37 5 177031311 177031311 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_007255.2 +1 reviewed p.V61A 0.089 15 0% 29 27.6% 20 25% benign(0) tolerated(0.22) neutral(0.042) HMMPfam_Galactosyl_T_2,superfamily_Nucleotide-diphospho-sugar transferases RNF130 55819 genome.wustl.edu 37 5 179407199 179407199 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018434.4 -1 reviewed p.R232H 1.000 472 0% 340 25.3% 153 30% probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL FLT4 2324 genome.wustl.edu 37 5 180046744 180046744 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_182925.4 -1 reviewed p.F856 0.991 36 0% 37 40.5% 2 0% - - - HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP BTNL3 10917 genome.wustl.edu 37 5 180431751 180431751 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_197975.1 +1 validated p.R284Q 0.001 267 0.4% 183 27.9% 1 0% possibly_damaging(0.945) tolerated(0.32) neutral(0.414) NULL BTNL3 10917 genome.wustl.edu 37 5 180432378 180432378 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_197975.1 +1 validated p.V303I 0.095 148 0% 144 18.1% 0 - possibly_damaging(0.574) tolerated(0.08) deleterious(0.497) HMMSmart_PRY IRF4 3662 genome.wustl.edu 37 6 397164 397164 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002460.2 +1 validated p.P183 0.203 120 0% 167 25.1% 2 0% - - - NULL RREB1 6239 genome.wustl.edu 37 6 7231669 7231669 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001003699.3 +1 reviewed p.T1113A 0.008 16 0% 26 19.2% 8 50% benign(0) tolerated(0.41) neutral(0.015) NULL BTN1A1 696 genome.wustl.edu 37 6 26508941 26508941 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001732.2 +1 validated p.V374M 1.000 178 0% 146 21.2% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_SPRY,HMMSmart_SM00449 SCAND3 114821 genome.wustl.edu 37 6 28540488 28540488 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_052923.1 -1 provisional p.R1060W 0.999 62 0% 30 23.3% 1 0% probably_damaging(0.991) deleterious(0.02) deleterious(0.827) NULL SCAND3 114821 genome.wustl.edu 37 6 28540694 28540694 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_052923.1 -1 provisional p.A991V 0.923 114 0% 45 22.2% 0 - benign(0) tolerated(0.35) neutral(0.021) NULL GABBR1 2550 genome.wustl.edu 37 6 29599357 29599357 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001470.2 -1 reviewed p.P35 1.000 84 0% 127 25.2% 0 - - - - HMMSmart_SM00032,superfamily_Complement control module/SCR domain DHX16 8449 genome.wustl.edu 37 6 30623004 30623004 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003587.4 -1 reviewed p.R924H 1.000 155 0% 129 20.9% 45 40% probably_damaging(0.995) deleterious(0) deleterious(0.902) HMMPfam_DUF1605 HLA-C 3107 genome.wustl.edu 37 6 31239108 31239108 + Missense_Mutation SNP T T C rs112994647 TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002117.4 -1 reviewed p.R121G 0.002 12 0% 12 41.7% 3476 49.1% possibly_damaging(0.813) tolerated(0.06) deleterious(0.629) HMMPfam_MHC_I,superfamily_MHC antigen-recognition domain ZBTB22 9278 genome.wustl.edu 37 6 33284384 33284384 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001145338.1 -1 validated p.A104T 1.000 95 0% 76 28.9% 13 53.8% probably_damaging(0.98) tolerated(0.09) deleterious(0.720) HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB GRM4 2914 genome.wustl.edu 37 6 34026904 34026904 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000841.1 -1 reviewed p.R292C 1.000 39 0% 45 22.2% 0 - benign(0.036) deleterious(0.01) neutral(0.408) HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I FTSJD2 23070 genome.wustl.edu 37 6 37429829 37429829 + Nonsense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015050.2 +1 validated p.R426* 1.000 454 0% 207 24.6% 8 0% - - - HMMPfam_FtsJ,superfamily_S-adenosyl-L-methionine-dependent methyltransferases CCDC167 154467 genome.wustl.edu 37 6 37450966 37450966 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_138493.2 -1 validated p.M97T 0.958 299 0% 263 25.5% 75 32% benign(0.004) deleterious(0.02) neutral(0.383) NULL KCNK5 8645 genome.wustl.edu 37 6 39158853 39158853 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003740.3 -1 reviewed p.S438L 0.997 114 0% 97 20.6% 2 0% probably_damaging(0.978) deleterious(0) deleterious(0.865) NULL KLHDC3 116138 genome.wustl.edu 37 6 42986253 42986253 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_057161.2 +1 reviewed p.P231L 0.928 142 0% 196 24.5% 49 32.6% benign(0.001) tolerated(0.32) neutral(0.024) HMMPfam_Kelch_1,superfamily_Galactose oxidase central domain TJAP1 93643 genome.wustl.edu 37 6 43470039 43470039 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000454762 +1 known p.G61S 0.015 151 0% 141 23.4% 11 45.4% - - - NULL POLH 5429 genome.wustl.edu 37 6 43565515 43565515 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006502.2 +1 reviewed p.T191 0.671 357 0% 185 17.3% 9 0% - - - HMMPfam_IMS,superfamily_DNA/RNA polymerases TMEM151B 441151 genome.wustl.edu 37 6 44240886 44240886 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001137560.1 +1 validated p.Y73 1.000 321 0% 419 26.5% 0 - - - - NULL PKHD1 5314 genome.wustl.edu 37 6 51618115 51618115 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_138694.3 -1 reviewed p.R2945H 0.010 113 0% 29 20.7% 0 - benign(0.001) tolerated(0.16) neutral(0.059) NULL PKHD1 5314 genome.wustl.edu 37 6 51929823 51929823 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_138694.3 -1 reviewed p.V302 0.998 135 0% 85 9.4% 0 - - - - HMMPfam_TIG,HMMSmart_SM00429,superfamily_E set domains DST 667 genome.wustl.edu 37 6 56510679 56510679 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000370769 -1 known p.R377H 0.997 117 0% 53 18.9% 1 100% probably_damaging(1) tolerated(0.08) deleterious(0.800) superfamily_Spectrin repeat COL19A1 1310 genome.wustl.edu 37 6 70890359 70890359 + Nonsense_Mutation SNP A A T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001858.4 +1 reviewed p.R907* 0.997 580 0% 229 27.1% 0 - - - - HMMPfam_Collagen HTR1B 3351 genome.wustl.edu 37 6 78172393 78172393 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000863.1 -1 provisional p.T243M 1.000 101 0% 123 19.5% 1 0% probably_damaging(0.967) tolerated(0.1) deleterious(0.696) HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like ZNF292 23036 genome.wustl.edu 37 6 87965639 87965639 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015021.1 +1 validated p.Y764 0.754 90 0% 23 21.7% 0 - - - - PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers NCOA7 135112 genome.wustl.edu 37 6 126242113 126242113 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_181782.3 +1 validated p.R757C 1.000 112 0% 41 17.1% 22 59% probably_damaging(1) deleterious(0.01) deleterious(0.905) NULL MED23 9439 genome.wustl.edu 37 6 131919864 131919864 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004830.2 -1 reviewed p.R753H 1.000 340 0% 117 23.9% 8 12.5% probably_damaging(0.976) deleterious(0.01) deleterious(0.824) NULL PCMT1 5110 genome.wustl.edu 37 6 150123392 150123392 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005389.2 +1 validated p.G187 0.964 95 0% 49 20.4% 70 44.2% - - - HMMPfam_PCMT,superfamily_S-adenosyl-L-methionine-dependent methyltransferases RAET1E 135250 genome.wustl.edu 37 6 150210538 150210538 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_139165.1 -1 provisional p.D190N 0.000 248 0% 168 23.2% 0 - benign(0) tolerated(0.45) neutral(0.012) HMMPfam_MHC_I,superfamily_MHC antigen-recognition domain TIAM2 26230 genome.wustl.edu 37 6 155571046 155571046 + Missense_Mutation SNP G G T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_012454.3 +1 reviewed p.E1298D 1.000 237 0% 206 23.3% 1 100% probably_damaging(0.987) deleterious(0.01) deleterious(0.842) superfamily_DBL homology domain (DH-domain) MLLT4 4301 genome.wustl.edu 37 6 168363235 168363235 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000507704 +1 known p.T134M 0.969 116 0% 135 25.9% 28 46.4% - - - NULL DACT2 168002 genome.wustl.edu 37 6 168708497 168708497 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_214462.3 -1 validated p.R647H 0.003 27 0% 36 33.3% 25 52% probably_damaging(0.957) tolerated(0.19) neutral(0.450) NULL THBS2 7058 genome.wustl.edu 37 6 169648886 169648886 + Missense_Mutation SNP G G A rs149505756 by1000genomes TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003247.2 -1 reviewed p.R79W 0.939 263 0% 244 27.9% 1 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_TSPN,superfamily_ConA_like_lec_gl FAM20C 56975 genome.wustl.edu 37 7 208950 208950 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020223.2 +1 validated p.Y279 0.974 178 0.6% 278 23.7% 29 27.5% - - - NULL BRAT1 221927 genome.wustl.edu 37 7 2577967 2577967 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_152743.2 -1 provisional p.S734 0.000 29 0% 56 19.6% 47 36.1% - - - NULL CARD11 84433 genome.wustl.edu 37 7 2962846 2962846 + Nonsense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_032415.3 -1 validated p.R688* 0.010 27 0% 23 21.7% 7 0% - - - HMMSmart_PDZ,superfamily_PDZ SDK1 221935 genome.wustl.edu 37 7 4285306 4285306 + Splice_Site SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_152744.3 +1 validated e44-2 0.996 76 0% 49 26.5% 0 - - - - - FSCN1 6624 genome.wustl.edu 37 7 5643002 5643002 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003088.2 +1 validated p.T316M 1.000 89 0% 92 17.4% 29 0% probably_damaging(1) deleterious(0.01) deleterious(0.905) superfamily_Actin_crosslink,HMMPfam_Fascin GRID2IP 392862 genome.wustl.edu 37 7 6537806 6537806 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001145118.1 -1 validated p.R1151 0.000 45 0% 41 31.7% 0 - - - - HMMSmart_FH2,HMMPfam_FH2,superfamily_FH2_actin_bd SP4 6671 genome.wustl.edu 37 7 21469657 21469657 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003112.3 +1 validated p.S292G 1.000 198 0% 221 29.4% 1 0% benign(0) tolerated(1) - NULL MIR1183 100302122 genome.wustl.edu 37 7 21510691 21510691 + RNA SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000408856 +1 known NULL 0.001 194 0% 109 22.9% 0 - - - - - DNAH11 8701 genome.wustl.edu 37 7 21840783 21840783 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003777.3 +1 reviewed p.T3359M 0.998 113 0% 44 20.5% 0 - probably_damaging(1) deleterious(0.03) deleterious(0.865) NULL CDCA7L 55536 genome.wustl.edu 37 7 21951373 21951373 + Splice_Site SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018719.4 -1 validated e3-1 0.444 294 0% 129 27.9% 0 - - - - - OSBPL3 26031 genome.wustl.edu 37 7 24874256 24874256 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015550.2 -1 reviewed p.L532P 1.000 162 0% 57 17.5% 14 50% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_Oxysterol_BP C7orf72 100130988 genome.wustl.edu 37 7 50179777 50179777 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000297001 +1 known p.T326I 1.000 54 0% 27 29.6% 0 - benign(0.381) tolerated(0.05) neutral(0.467) NULL LOC100132308 100132308 genome.wustl.edu 37 7 63022839 63022839 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 XM_001715240.2 +1 model p.T287I 1.000 68 1.5% 72 12.5% 0 - - - - HMMPfam_Nucleoside_tran ELN 2006 genome.wustl.edu 37 7 73471025 73471025 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000501.2 +1 reviewed p.A447T 0.956 40 0% 58 25.9% 9 0% unknown(0) tolerated(0.08) - NULL CLIP2 7461 genome.wustl.edu 37 7 73790905 73790905 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003388.4 +1 reviewed p.R725H 0.698 38 0% 60 16.7% 2 0% possibly_damaging(0.478) tolerated(0.12) neutral(0.418) NULL RHBDD2 57414 genome.wustl.edu 37 7 75513122 75513122 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001040456.1 +1 validated p.Y231 0.271 152 0% 184 25% 144 41.6% possibly_damaging(0.704) deleterious(0) deleterious(0.698) NULL MAGI2 9863 genome.wustl.edu 37 7 77885378 77885378 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_012301.3 -1 reviewed p.G643 0.130 164 0% 46 15.2% 0 - - - - HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like ENSG00000240720 0 genome.wustl.edu 37 7 91793685 91793685 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000430130 -1 known p.S278G 0.000 8 0.000 13 0.308 0 - benign(0) tolerated(0.55) neutral(0.007) HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_L domain-like TECPR1 25851 genome.wustl.edu 37 7 97857397 97857397 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015395.1 -1 provisional p.T814 0.071 255 0% 308 24% 4 25% - - - NULL C7orf43 55262 genome.wustl.edu 37 7 99753036 99753036 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018275.3 -1 predicted p.V480M 0.989 119 0% 140 26.4% 30 36.6% possibly_damaging(0.701) tolerated(0.1) deleterious(0.538) NULL TSC22D4 81628 genome.wustl.edu 37 7 100064725 100064725 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_030935.3 -1 provisional p.R349W 1.000 60 0% 85 23.5% 62 25.8% probably_damaging(0.996) deleterious(0) deleterious(0.906) HMMPfam_TSC22 SLC26A5 375611 genome.wustl.edu 37 7 103033465 103033465 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_198999.2 -1 reviewed p.Y340 0.917 366 0% 141 27.7% 1 0% - - - HMMPfam_Sulfate_transp MLL5 55904 genome.wustl.edu 37 7 104748202 104748202 + Nonsense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018682.3 +1 reviewed p.R1100* 1.000 233 0.4% 69 14.5% 9 0% - - - NULL ATXN7L1 222255 genome.wustl.edu 37 7 105254972 105254972 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020725.1 -1 validated p.A603 0.999 712 0.3% 640 23.7% 3 0% - - - NULL LMOD2 442721 genome.wustl.edu 37 7 123296225 123296225 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_207163.1 +1 validated p.M70V 1.000 101 0% 31 12.9% 0 - possibly_damaging(0.866) tolerated(0.17) neutral(0.395) HMMPfam_Tropomodulin GCC1 79571 genome.wustl.edu 37 7 127223256 127223256 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024523.5 -1 reviewed p.Y380 0.139 116 0% 109 22.9% 7 42.8% - - - NULL CPA1 1357 genome.wustl.edu 37 7 130021599 130021599 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001868.2 +1 reviewed p.D92 0.059 60 0% 53 26.4% 0 - - - - HMMPfam_Propep_M14,superfamily_Prot_inh_propept PLXNA4 91584 genome.wustl.edu 37 7 131844247 131844247 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020911.1 -1 validated p.A1549T 1.000 275 0% 204 21.1% 1 100% benign(0.018) tolerated(0.46) neutral(0.013) superfamily_GTPase activation domain GAP,HMMPfam_Plexin_cytopl PLXNA4 91584 genome.wustl.edu 37 7 131912337 131912337 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020911.1 -1 validated p.P585 0.460 149 0% 96 19.8% 1 0% - - - NULL EXOC4 60412 genome.wustl.edu 37 7 133689780 133689780 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_021807.3 +1 reviewed p.S822G 1.000 143 0% 50 18% 17 29.4% probably_damaging(0.979) deleterious(0.03) deleterious(0.786) NULL CREB3L2 64764 genome.wustl.edu 37 7 137593098 137593098 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_194071.2 -1 validated p.R223H 0.995 122 0% 61 24.6% 7 14.2% possibly_damaging(0.897) tolerated(0.06) deleterious(0.676) NULL WEE2 494551 genome.wustl.edu 37 7 141427170 141427170 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001105558.1 +1 validated p.R487W 0.018 125 0% 59 35.6% 0 - benign(0.032) tolerated(0.1) neutral(0.288) NULL MGAM 8972 genome.wustl.edu 37 7 141803073 141803073 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004668.2 +1 reviewed p.T1777M 0.001 97 0% 48 29.2% 0 - possibly_damaging(0.468) tolerated(0.31) neutral(0.180) NULL TRBJ2-2 28628 genome.wustl.edu 37 7 142494252 142494252 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000390413 +1 known p.P3 0.001 96 0% 131 29% 3 0% unknown(0) - - NULL KEL 3792 genome.wustl.edu 37 7 142658918 142658918 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000460479 -1 known p.P26S 0.000 325 0% 103 31.1% 0 - - - - NULL ZYX 7791 genome.wustl.edu 37 7 143087677 143087677 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001010972.1 +1 reviewed p.G541R 1.000 106 0% 111 32.4% 332 27.4% benign(0.39) deleterious(0) deleterious(0.570) HMMPfam_LIM,HMMSmart_LIM ARHGEF5 7984 genome.wustl.edu 37 7 144059845 144059845 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005435.3 +1 reviewed p.M28T 0.818 487 0% 410 8.5% 14 14.2% possibly_damaging(0.55) deleterious(0.01) deleterious(0.593) NULL ZNF786 136051 genome.wustl.edu 37 7 148768734 148768734 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_152411.3 -1 validated p.R377H 0.101 5 0.000 16 0.250 3 33.3% benign(0.108) tolerated(0.06) neutral(0.331) NULL SSPO 23145 genome.wustl.edu 37 7 149486424 149486424 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000378016 +1 known p.P1467L 0.008 18 0% 37 24.3% 0 - - - - HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_LDL receptor-like module SSPO 23145 genome.wustl.edu 37 7 149488759 149488759 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000378016 +1 known p.H1737R 0.002 22 0% 24 29.2% 0 - - - - HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat SSPO 23145 genome.wustl.edu 37 7 149492764 149492764 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000262089 +1 known p.A1226T 0.000 91 0% 105 22.9% 0 - - - - NULL ABP1 26 genome.wustl.edu 37 7 150555924 150555924 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000480582 +1 known p.A61V 0.028 29 0% 38 26.3% 203 52.7% - - - HMMPfam_Cu_amine_oxid,superfamily_Amine oxidase catalytic domain KCNH2 3757 genome.wustl.edu 37 7 150648174 150648174 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000238.2 -1 reviewed p.S660 0.992 104 0% 111 30.6% 0 - - - - superfamily_Voltage-gated potassium channels KCNH2 3757 genome.wustl.edu 37 7 150648826 150648826 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000238.2 -1 reviewed p.L552S 1.000 86 0% 77 19.5% 3 66.6% probably_damaging(0.998) deleterious(0) deleterious(0.919) HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels KCNH2 3757 genome.wustl.edu 37 7 150648890 150648890 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000238.2 -1 reviewed p.R531W 1.000 67 0% 64 31.2% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels NOS3 4846 genome.wustl.edu 37 7 150696408 150696408 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000603.4 +1 reviewed p.G363S 1.000 34 0% 44 18.2% 3 0% probably_damaging(0.988) deleterious(0) deleterious(0.882) HMMPfam_NO_synthase,superfamily_Nitric oxide (NO) synthase oxygenase domain ASIC3 9311 genome.wustl.edu 37 7 150746413 150746413 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020321.2 +1 reviewed p.A147 0.373 65 0% 91 26.4% 0 - - - - HMMPfam_ASC PTPRN2 5799 genome.wustl.edu 37 7 157475601 157475601 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002847.3 -1 reviewed p.Q606R 0.001 318 0% 404 24.3% 0 - benign(0.004) tolerated(0.14) neutral(0.249) NULL ARHGEF10 9639 genome.wustl.edu 37 8 1882048 1882048 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014629.2 +1 reviewed p.T1054 0.000 352 0% 362 22.4% 7 57.1% - - - superfamily_WD40_like SGK223 157285 genome.wustl.edu 37 8 8175905 8175905 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001080826.1 -1 validated p.G1327E 1.000 56 0% 69 17.4% 12 16.6% probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_Protein kinase-like (PK-like) KIAA1456 57604 genome.wustl.edu 37 8 12863856 12863856 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020844.2 +1 validated p.A49T 0.994 155 0.6% 46 8.7% 0 - probably_damaging(0.995) deleterious(0.02) deleterious(0.841) HMMPfam_Methyltransf_11,superfamily_S-adenosyl-L-methionine-dependent methyltransferases SLC7A2 6542 genome.wustl.edu 37 8 17417900 17417900 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003046.5 +1 validated p.S493 0.000 154 0% 64 29.7% 0 - - - - NULL MTUS1 57509 genome.wustl.edu 37 8 17612057 17612057 + Silent SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001001924.2 -1 reviewed p.I420 0.000 149 0% 134 20.9% 7 14.2% - - - NULL XPO7 23039 genome.wustl.edu 37 8 21856273 21856273 + Nonsense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001100161.1 +1 validated p.R794* 1.000 340 0% 227 26.9% 9 0% - - - superfamily_ARM repeat SORBS3 10174 genome.wustl.edu 37 8 22423964 22423964 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005775.4 +1 validated p.R353W 0.926 89 1.1% 124 26.6% 9 22.2% probably_damaging(0.968) deleterious(0.02) deleterious(0.793) superfamily_SH3-domain NEFL 4747 genome.wustl.edu 37 8 24813515 24813515 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000221169 -1 known p.R172H 0.997 11 0% 25 28% 0 - - - - HMMPfam_Filament ADRA1A 148 genome.wustl.edu 37 8 26721757 26721757 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_033303.3 -1 reviewed p.G244R 0.001 108 0% 127 22.8% 0 - benign(0.133) deleterious(0.02) neutral(0.394) HMMPfam_7tm_1,superfamily_SSF81321 PTK2B 2185 genome.wustl.edu 37 8 27277461 27277461 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004103.3 +1 reviewed p.R85Q 1.000 179 0.6% 80 26.3% 8 25% benign(0) tolerated(0.99) - HMMSmart_SM00295 INTS9 55756 genome.wustl.edu 37 8 28627424 28627424 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018250.3 -1 reviewed p.F594 0.401 152 0.7% 104 19.2% 27 37% - - - NULL KIF13B 23303 genome.wustl.edu 37 8 29023195 29023195 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015254.3 -1 validated p.T418M 1.000 331 0% 122 27% 8 75% probably_damaging(1) deleterious(0) deleterious(0.945) NULL MBOAT4 619373 genome.wustl.edu 37 8 29990077 29990077 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001100916.1 -1 validated p.A230 0.000 200 0% 70 25.7% 0 - - - - HMMPfam_MBOAT FUT10 84750 genome.wustl.edu 37 8 33318925 33318925 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_032664.3 -1 validated p.V16I 0.049 156 0% 68 20.6% 2 50% benign(0.001) tolerated(0.76) neutral(0.001) HMMPfam_Glyco_transf_10 C8orf86 389649 genome.wustl.edu 37 8 38370055 38370055 + Missense_Mutation SNP G G T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000437935 -1 known p.L117M 0.000 130 0% 104 26% 0 - unknown(0) - - NULL AP3M2 10947 genome.wustl.edu 37 8 42025187 42025187 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001134296.1 +1 reviewed p.L339 1.000 215 0% 137 21.2% 4 25% - - - HMMPfam_Adap_comp_sub,superfamily_Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor HGSNAT 138050 genome.wustl.edu 37 8 43013804 43013804 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_152419.2 +1 reviewed p.H107 0.001 218 0.5% 106 16% 5 20% - - - NULL OPRK1 4986 genome.wustl.edu 37 8 54147372 54147372 + Missense_Mutation SNP G G A rs143457105 TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000912.3 -1 validated p.S186L 1.000 175 0% 104 19.2% 0 - probably_damaging(0.981) deleterious(0) deleterious(0.870) HMMPfam_7tm_1,superfamily_SSF81321 SDR16C6P 442388 genome.wustl.edu 37 8 57294520 57294520 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000444271 -1 known p.T238I 0.000 98 0% 45 28.9% 0 - - - - superfamily_NAD(P)-binding Rossmann-fold domains CA8 767 genome.wustl.edu 37 8 61137107 61137107 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004056.4 -1 reviewed p.T205I 1.000 145 0% 50 14% 17 29.4% benign(0.006) tolerated(0.21) neutral(0.044) HMMPfam_Carb_anhydrase,superfamily_Carbonic anhydrase ZNF704 619279 genome.wustl.edu 37 8 81553673 81553673 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001033723.1 -1 provisional p.Y389 0.972 203 0.5% 94 16% 4 25% - - - NULL RUNX1T1 862 genome.wustl.edu 37 8 93088199 93088199 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_175634.1 -1 reviewed p.C28R 1.000 158 0% 81 27.2% 0 - possibly_damaging(0.526) deleterious(0.01) deleterious(0.583) NULL SPAG1 6674 genome.wustl.edu 37 8 101190137 101190137 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003114.3 +1 reviewed p.R132C 1.000 198 0% 79 16.5% 1 100% probably_damaging(1) deleterious(0) deleterious(0.945) NULL ABRA 137735 genome.wustl.edu 37 8 107782309 107782309 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_139166.4 -1 validated p.A37V 0.992 148 0% 119 22.7% 0 - probably_damaging(0.999) tolerated(0.18) deleterious(0.546) NULL TAF2 6873 genome.wustl.edu 37 8 120744387 120744387 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003184.3 -1 reviewed p.A1126V 0.000 439 0% 143 24.5% 16 18.7% benign(0) tolerated(1) - NULL HAS2 3037 genome.wustl.edu 37 8 122641117 122641117 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005328.2 -1 reviewed p.K155R 0.986 337 0% 164 25.6% 0 - benign(0) tolerated(0.69) neutral(0.002) superfamily_SSF53448 ATAD2 29028 genome.wustl.edu 37 8 124382176 124382176 + Silent SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014109.3 -1 reviewed p.D272 0.998 458 0% 219 22.8% 3 33.3% - - - HMMPfam_YL1 KLHL38 340359 genome.wustl.edu 37 8 124665040 124665040 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001081675.2 -1 validated p.R43W 0.000 104 0% 56 28.6% 0 - benign(0) tolerated(0.22) neutral(0.042) HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB LRRC6 23639 genome.wustl.edu 37 8 133637585 133637585 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_012472.3 -1 provisional p.T257A 1.000 543 0% 227 25.1% 11 36.3% probably_damaging(0.998) tolerated(0.18) deleterious(0.530) NULL TG 7038 genome.wustl.edu 37 8 133900283 133900283 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003235.4 +1 reviewed p.A744V 0.003 122 0% 44 27.3% 0 - benign(0.001) tolerated(0.99) - superfamily_Thyroglobulin type-1 domain COL22A1 169044 genome.wustl.edu 37 8 139768056 139768056 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_152888.1 -1 validated p.A640V 0.027 184 0% 133 29.3% 1 100% unknown(0) tolerated(0.39) - NULL FLJ43860 389690 genome.wustl.edu 37 8 142459701 142459701 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_207414.2 -1 validated p.R876C 0.166 59 0% 43 23.3% 0 - probably_damaging(0.999) tolerated(0.11) deleterious(0.762) superfamily_ARM repeat C8orf73 642475 genome.wustl.edu 37 8 144650399 144650399 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001100878.1 -1 validated p.H559 0.615 59 0% 94 27.7% 9 33.3% - - - superfamily_ARM-type_fold FBXL6 26233 genome.wustl.edu 37 8 145579318 145579318 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_012162.1 -1 reviewed p.P498L 0.973 48 0% 76 21.1% 52 34.6% probably_damaging(0.99) tolerated(0.1) deleterious(0.728) HMMSmart_SM00367,superfamily_RNI-like CPSF1 29894 genome.wustl.edu 37 8 145619001 145619001 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_013291.2 -1 validated p.D1342 0.434 125 0% 215 25.6% 89 44.9% - - - HMMPfam_CPSF_A FOXD4 2298 genome.wustl.edu 37 9 116972 116972 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_207305.3 -1 validated p.A383V 0.103 204 0% 234 12% 0 - possibly_damaging(0.842) tolerated(0.54) neutral(0.330) NULL DOCK8 81704 genome.wustl.edu 37 9 328086 328086 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_203447.3 +1 reviewed p.T252M 0.994 244 0% 93 25.8% 2 0% probably_damaging(0.973) tolerated(0.13) deleterious(0.667) NULL CDC37L1 55664 genome.wustl.edu 37 9 4702007 4702007 + Silent SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_017913.2 +1 validated p.G297 0.656 131 0% 67 25.4% 23 47.8% - - - superfamily_SSF101391 UHRF2 115426 genome.wustl.edu 37 9 6498151 6498151 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_152896.1 +1 reviewed p.R634H 0.862 290 0.3% 102 26.5% 9 33.3% possibly_damaging(0.938) tolerated(0.11) deleterious(0.655) NULL PTPRD 5789 genome.wustl.edu 37 9 8485847 8485847 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002839.3 -1 reviewed p.Y990 0.836 279 0% 113 27.4% 1 100% - - - HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III FREM1 158326 genome.wustl.edu 37 9 14868942 14868942 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_144966.5 -1 reviewed p.V12M 0.011 99 0% 35 20% 2 0% benign(0.002) tolerated(0.08) neutral(0.300) NULL DNAJB5 25822 genome.wustl.edu 37 9 34997192 34997192 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001135005.1 +1 validated p.R400H 1.000 156 0% 151 30.5% 9 33.3% benign(0.071) tolerated(0.16) neutral(0.065) HMMPfam_DnaJ_C,superfamily_HSP40/DnaJ peptide-binding domain C9orf128 392307 genome.wustl.edu 37 9 35825358 35825358 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001012446.2 -1 validated p.R204H 0.000 197 0% 248 26.2% 0 - benign(0.007) tolerated(0.23) neutral(0.042) NULL FBXO10 26267 genome.wustl.edu 37 9 37537464 37537464 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_012166.2 -1 validated p.S354 0.984 81 0% 50 22% 2 0% - - - HMMSmart_CASH FXN 2395 genome.wustl.edu 37 9 71679951 71679951 + Missense_Mutation SNP G G T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000144.4 +1 reviewed p.S161I 0.994 292 0% 271 16.6% 30 40% probably_damaging(0.959) deleterious(0) deleterious(0.847) HMMPfam_Frataxin_Cyay,superfamily_Frataxin-like TJP2 9414 genome.wustl.edu 37 9 71836092 71836092 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004817.3 +1 reviewed p.R211H 0.000 10 0% 23 26.1% 7 14.2% possibly_damaging(0.95) tolerated(0.1) deleterious(0.680) NULL KIF27 55582 genome.wustl.edu 37 9 86523391 86523391 + Nonsense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_017576.1 -1 provisional p.R159* 1.000 203 0% 91 17.6% 0 - - - - HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases C9orf64 84267 genome.wustl.edu 37 9 86570359 86570359 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_032307.3 -1 validated p.A178 0.223 44 0% 83 20.5% 6 50% - - - HMMPfam_DUF2419 NTRK2 4915 genome.wustl.edu 37 9 87285747 87285747 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006180.3 +1 reviewed p.A28 0.778 181 0.6% 227 28.2% 0 - - - - superfamily_SSF52058 NXNL2 158046 genome.wustl.edu 37 9 91150414 91150414 + Missense_Mutation SNP C C A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_145283.2 +1 validated p.A22E 1.000 49 0% 65 29.2% 17 17.6% benign(0) tolerated(1) - superfamily_Thiordxn-like_fd BICD2 23299 genome.wustl.edu 37 9 95477462 95477462 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001003800.1 -1 reviewed p.E848K 1.000 54 0% 46 32.6% 1 0% probably_damaging(0.979) deleterious(0) deleterious(0.867) NULL PTPDC1 138639 genome.wustl.edu 37 9 96847545 96847545 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_152422.3 +1 reviewed p.R84H 0.990 180 0% 132 17.4% 0 - probably_damaging(0.997) tolerated(0.09) deleterious(0.762) NULL ZNF462 58499 genome.wustl.edu 37 9 109687834 109687834 + Silent SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_021224.4 +1 validated p.P547 0.196 258 0% 233 30.5% 3 33.3% - - - superfamily_beta-sandwich domain of Sec23/24 ACTL7B 10880 genome.wustl.edu 37 9 111617666 111617666 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006686.3 -1 reviewed p.S182L 1.000 39 2.6% 44 27.3% 0 - benign(0.042) deleterious(0) neutral(0.447) HMMPfam_Actin,HMMSmart_SM00268,superfamily_Actin-like ATPase domain PALM2-AKAP2 445815 genome.wustl.edu 37 9 112642906 112642906 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_007203.4 +1 validated p.R68W 0.994 149 0% 66 28.8% 0 - probably_damaging(0.998) deleterious(0) deleterious(0.919) NULL COL27A1 85301 genome.wustl.edu 37 9 116930259 116930259 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_032888.2 +1 validated p.R142W 1.000 23 0% 40 37.5% 5 20% probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMSmart_SM00210,superfamily_Concanavalin A-like lectins/glucanases COL27A1 85301 genome.wustl.edu 37 9 117014903 117014903 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_032888.2 +1 validated p.V1022M 0.009 170 0% 109 21.1% 4 25% unknown(0) tolerated(0.11) - NULL CNTRL 11064 genome.wustl.edu 37 9 123927235 123927235 + Missense_Mutation SNP C C A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_007018.4 +1 reviewed p.A1813E 0.984 120 0% 57 36.8% 2 0% benign(0.014) tolerated(0.33) neutral(0.025) superfamily_tRNA-binding arm RC3H2 54542 genome.wustl.edu 37 9 125611951 125611951 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001100588.1 -1 validated p.N1177 0.868 160 0% 220 28.2% 7 57.1% - - - NULL NEK6 10783 genome.wustl.edu 37 9 127110081 127110081 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001145001.2 +1 reviewed p.G305R 0.011 123 0.8% 146 30.8% 65 43% benign(0.001) tolerated(0.05) neutral(0.345) HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase GPR144 347088 genome.wustl.edu 37 9 127237853 127237853 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000334810 +1 known p.R909W 0.911 153 0% 200 24.5% 0 - probably_damaging(0.996) deleterious(0) deleterious(0.906) NULL OLFML2A 169611 genome.wustl.edu 37 9 127572427 127572427 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_182487.2 +1 validated p.T565 0.876 62 0% 77 28.6% 0 - - - - HMMPfam_OLF,HMMSmart_SM00284 WDR38 401551 genome.wustl.edu 37 9 127616566 127616566 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001045476.1 +1 provisional p.R51Q 0.038 138 0% 197 23.4% 3 66.6% benign(0.001) tolerated(0.58) neutral(0.005) superfamily_WD40_like GARNL3 84253 genome.wustl.edu 37 9 130095371 130095371 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_032293.4 +1 validated p.T247M 1.000 152 0% 70 38.6% 0 - possibly_damaging(0.87) tolerated(0.08) deleterious(0.638) HMMPfam_Rap_GAP,superfamily_Rap/Ran-GAP (Pfam 02145) SPTAN1 6709 genome.wustl.edu 37 9 131345016 131345016 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001130438.1 +1 validated p.R565H 1.000 193 0% 116 23.3% 14 28.5% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Spectrin,HMMSmart_SPEC,superfamily_Spectrin DOLPP1 57171 genome.wustl.edu 37 9 131847514 131847514 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020438.4 +1 validated p.Y97 1.000 259 0% 426 24.2% 12 41.6% probably_damaging(0.983) - - HMMPfam_PAP2,HMMSmart_acidPPc,superfamily_AcPase_VanPerase CRAT 1384 genome.wustl.edu 37 9 131860346 131860346 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000455396 -1 known p.G69S 0.000 151 0% 146 28.1% 46 45.6% - - - HMMPfam_Carn_acyltransf,superfamily_CoA-dependent acyltransferases QRFP 347148 genome.wustl.edu 37 9 133768893 133768893 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_198180.1 -1 validated p.P111 0.000 42 0% 52 23.1% 0 - - - - NULL NUP214 8021 genome.wustl.edu 37 9 134103662 134103662 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005085.2 +1 reviewed p.S2006 1.000 126 0% 69 21.7% 35 45.7% unknown(0) - - NULL RAPGEF1 2889 genome.wustl.edu 37 9 134471752 134471752 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000414781 -1 known p.R116W 0.657 200 0.5% 167 36.5% 14 7.1% - - - HMMSmart_SM00229,superfamily_Ras GEF VAV2 7410 genome.wustl.edu 37 9 136677304 136677304 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001134398.1 -1 reviewed p.V162I 1.000 183 0% 182 25.3% 6 0% possibly_damaging(0.889) tolerated(0.23) neutral(0.391) superfamily_Calponin-homology domain CH-domain COL5A1 1289 genome.wustl.edu 37 9 137653806 137653806 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000093.3 +1 reviewed p.P657 0.377 150 0% 176 26.7% 2 0% - - - HMMPfam_Collagen FCN1 2219 genome.wustl.edu 37 9 137804966 137804966 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002003.3 -1 reviewed p.L122 0.072 113 0% 117 19.7% 0 - - - - HMMPfam_Fibrinogen_C,HMMSmart_SM00186,superfamily_Fibrinogen C-terminal domain-like KCNT1 57582 genome.wustl.edu 37 9 138642833 138642833 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020822.2 +1 validated p.C127Y 1.000 81 0% 104 26% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) NULL SDCCAG3 10807 genome.wustl.edu 37 9 139298566 139298566 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000417512 -1 known p.T115M 1.000 66 0% 79 15.2% 25 28% - - - NULL NOTCH1 4851 genome.wustl.edu 37 9 139395179 139395179 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_017617.3 -1 reviewed p.L1920P 1.000 53 0% 94 19.1% 16 6.2% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK LOC100289474 100289474 genome.wustl.edu 37 9 139399349 139399349 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 XM_002344210.1 +1 model p.A105T 0.489 34 0% 35 20% 13 38.4% - - - NULL COBRA1 25920 genome.wustl.edu 37 9 140166980 140166980 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015456.3 +1 validated p.H503 0.236 20 0% 40 25% 80 32.5% - - - HMMPfam_COBRA1 EHMT1 79813 genome.wustl.edu 37 9 140638532 140638532 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000460843 +1 known p.R387H 0.013 109 0% 91 20.9% 18 61.1% benign(0.003) tolerated(0.19) neutral(0.050) NULL DIP2C 22982 genome.wustl.edu 37 10 415437 415437 + Nonsense_Mutation SNP C C A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014974.2 -1 reviewed p.G710* 1.000 119 0% 111 24.3% 1 0% - - - superfamily_SSF56801 ADARB2 105 genome.wustl.edu 37 10 1246080 1246080 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018702.2 -1 reviewed p.V564I 0.218 21 0% 34 29.4% 0 - benign(0.272) tolerated(0.13) neutral(0.282) HMMPfam_A_deamin,HMMSmart_ADEAMc MCM10 55388 genome.wustl.edu 37 10 13225033 13225033 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_182751.2 +1 validated p.T345M 1.000 146 0.7% 53 32.1% 0 - probably_damaging(1) tolerated(0.07) deleterious(0.819) NULL SLC39A12 221074 genome.wustl.edu 37 10 18254611 18254611 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001145195.1 +1 validated p.R248H 0.499 63 0% 38 34.2% 0 - benign(0) tolerated(0.14) neutral(0.249) NULL ZNF33B 7582 genome.wustl.edu 37 10 43088760 43088760 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006955.1 -1 provisional p.T546 0.981 271 0% 116 33.6% 4 75% - - - HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 HNRNPF 3185 genome.wustl.edu 37 10 43882850 43882850 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001098204.1 -1 reviewed p.S161 0.035 262 0.4% 286 24.5% 176 44.3% - - - HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD ZNF32 7580 genome.wustl.edu 37 10 44140042 44140042 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001005368.1 -1 validated p.T93M 0.877 387 0% 317 27.1% 41 51.2% probably_damaging(0.98) tolerated(0.06) deleterious(0.746) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 RBP3 5949 genome.wustl.edu 37 10 48382255 48382255 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002900.2 -1 reviewed p.R1132C 0.999 38 0% 48 20.8% 0 - possibly_damaging(0.919) deleterious(0) deleterious(0.814) HMMPfam_Peptidase_S41,HMMSmart_SM00245,superfamily_ClpP/crotonase GDF2 2658 genome.wustl.edu 37 10 48413998 48413998 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_016204.1 -1 reviewed p.D290 0.000 202 0% 199 29.6% 0 - - - - NULL VSTM4 196740 genome.wustl.edu 37 10 50315807 50315807 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001031746.3 -1 validated p.R97W 0.868 89 0% 96 25% 3 33.3% probably_damaging(0.968) deleterious(0.03) deleterious(0.774) HMMSmart_SM00409,superfamily_Immunoglobulin ERCC6 2074 genome.wustl.edu 37 10 50667132 50667132 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000124.2 -1 reviewed p.R1404H 0.988 101 0% 41 19.5% 3 33.3% probably_damaging(0.988) deleterious(0.04) deleterious(0.786) NULL CSTF2T 23283 genome.wustl.edu 37 10 53458297 53458297 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015235.2 -1 validated p.R338H 1.000 61 0% 23 17.4% 15 33.3% probably_damaging(1) deleterious(0) deleterious(0.945) NULL EGR2 1959 genome.wustl.edu 37 10 64573350 64573350 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000399.3 -1 reviewed p.R350W 1.000 108 0% 184 28.3% 1 0% probably_damaging(0.997) deleterious(0) deleterious(0.911) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers CDH23 64072 genome.wustl.edu 37 10 73468939 73468939 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_022124.5 +1 reviewed p.A1064V 0.998 184 0% 162 53.7% 0 - possibly_damaging(0.69) tolerated(0.08) deleterious(0.547) HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like CDH23 64072 genome.wustl.edu 37 10 73537564 73537564 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_022124.5 +1 reviewed p.Q1658R 1.000 161 0% 149 20.8% 0 - benign(0.004) tolerated(1) - HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like VCL 7414 genome.wustl.edu 37 10 75874625 75874625 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014000.2 +1 reviewed p.R1076W 0.999 269 0% 101 20.8% 43 20.9% probably_damaging(1) deleterious(0.03) deleterious(0.865) HMMPfam_Vinculin,superfamily_alpha-catenin/vinculin WAPAL 23063 genome.wustl.edu 37 10 88206193 88206193 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015045.2 -1 validated p.R1043Q 1.000 231 0% 165 55.2% 19 73.6% probably_damaging(0.997) tolerated(0.23) deleterious(0.508) superfamily_ARM repeat PTEN 5728 genome.wustl.edu 37 10 89692904 89692904 + Nonsense_Mutation SNP C C T rs121909224 byCluster TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000371953 +1 known p.R130* 1.000 256 0% 72 45.8% 6 50% - - - HMMPfam_DSPc,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II KIF20B 9585 genome.wustl.edu 37 10 91532536 91532536 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_016195.2 +1 validated p.R1738Q 1.000 121 0% 30 43.3% 1 100% probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL TCTN3 26123 genome.wustl.edu 37 10 97447073 97447073 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015631.5 -1 validated p.V223I 0.154 71 0% 46 56.5% 27 88.8% benign(0.002) tolerated(0.31) neutral(0.027) HMMPfam_DUF1619 ABCC2 1244 genome.wustl.edu 37 10 101563849 101563849 + Missense_Mutation SNP C C A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000392.3 +1 reviewed p.A428D 1.000 345 0% 99 27.3% 0 - probably_damaging(0.98) deleterious(0) deleterious(0.869) HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain CNNM2 54805 genome.wustl.edu 37 10 104836928 104836928 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_017649.3 +1 validated p.G873 0.970 62 0% 47 25.5% 4 75% - - - NULL PDCD11 22984 genome.wustl.edu 37 10 105178197 105178197 + Silent SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014976.1 +1 validated p.L638 1.000 347 0% 262 52.3% 4 100% - - - superfamily_Nucleic_acid_OB,HMMSmart_S1 CCDC147 159686 genome.wustl.edu 37 10 106139944 106139944 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001008723.1 +1 validated p.R444Q 1.000 92 0% 30 50% 0 - benign(0.027) tolerated(0.11) neutral(0.273) NULL SLC18A2 6571 genome.wustl.edu 37 10 119013617 119013617 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003054.4 +1 reviewed p.I194 0.030 144 0.7% 82 26.8% 0 - - - - HMMPfam_MFS_1,superfamily_MFS general substrate transporter EIF3A 8661 genome.wustl.edu 37 10 120802002 120802002 + Silent SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003750.2 -1 validated p.R1010 0.011 410 0.2% 300 49.3% 84 80.9% - - - NULL INPP5F 22876 genome.wustl.edu 37 10 121586592 121586592 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014937.2 +1 reviewed p.R900Q 0.944 186 0% 108 57.4% 2 100% probably_damaging(1) deleterious(0) deleterious(0.945) NULL FGFR2 2263 genome.wustl.edu 37 10 123274794 123274794 + Missense_Mutation SNP T T C rs121913478 byCluster TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_022970.3 -1 reviewed p.Y376C 1.000 183 0% 102 36.3% 52 100% probably_damaging(1) deleterious(0.03) deleterious(0.865) NULL CPXM2 119587 genome.wustl.edu 37 10 125528173 125528174 + In_Frame_Ins INS - - CAGCAGCTCCCGGCC novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_198148.2 -1 validated p.389in_frame_insGRELL 1.000:0.929 - - - - - - - - - HMMPfam_Peptidase_M14,PatternScan_CARBOXYPEPT_ZN_1,superfamily_Zn-dependent exopeptidases MUC6 4588 genome.wustl.edu 37 11 1025271 1025271 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005961.2 -1 validated p.V966M 0.172 54 0% 59 20.3% 1 0% unknown(0) deleterious(0.01) - HMMPfam_VWD,HMMSmart_SM00216 SYT8 90019 genome.wustl.edu 37 11 1857515 1857515 + Splice_Site SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_138567.3 +1 validated e5+1 0.978 53 0% 42 19% 0 - - - - - OSBPL5 114879 genome.wustl.edu 37 11 3121470 3121470 + Silent SNP C C T rs181441297 by1000genomes TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020896.3 -1 reviewed p.A513 0.813 229 0% 251 27.1% 14 35.7% - - - HMMPfam_Oxysterol_BP ENSG00000225101 0 genome.wustl.edu 37 11 4496854 4496854 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000416879 +1 known p.V56I 0.060 119 0% 81 28.4% 1 0% - - - superfamily_Family A G protein-coupled receptor-like OR51T1 401665 genome.wustl.edu 37 11 4903353 4903353 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001004759.1 +1 provisional p.L102P 0.093 813 0.1% 312 12.5% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like OR51A7 119687 genome.wustl.edu 37 11 4929151 4929151 + Silent SNP C C A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001004749.1 +1 provisional p.T184 0.807 327 0% 116 11.2% 0 - - - - HMMPfam_7tm_1,superfamily_SSF81321 TRIM6 117854 genome.wustl.edu 37 11 5632396 5632396 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001003818.1 +1 reviewed p.R459C 0.614 273 0.4% 232 19% 1 100% benign(0.06) deleterious(0.04) neutral(0.353) HMMPfam_SPRY,HMMSmart_SPRY FAM160A2 84067 genome.wustl.edu 37 11 6232747 6232747 + Missense_Mutation SNP G G T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_032127.3 -1 validated p.L984I 1.000 24 0% 25 36% 17 23.5% possibly_damaging(0.936) deleterious(0) deleterious(0.826) NULL TRIM66 9866 genome.wustl.edu 37 11 8662129 8662129 + Missense_Mutation SNP G G T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014818.1 -1 validated p.P453Q 0.997 179 0% 130 15.4% 0 - possibly_damaging(0.574) deleterious(0) deleterious(0.641) NULL ST5 6764 genome.wustl.edu 37 11 8734190 8734190 + Missense_Mutation SNP G G A rs75648256 TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005418.3 -1 reviewed p.R694W 1.000 84 0% 129 24.8% 7 42.8% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_uDENN,HMMSmart_SM00800 COPB1 1315 genome.wustl.edu 37 11 14486473 14486473 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001144061.1 -1 reviewed p.I798M 1.000 260 0% 127 31.5% 77 40.2% possibly_damaging(0.822) deleterious(0) deleterious(0.756) HMMPfam_Coatamer_beta_C KCNC1 3746 genome.wustl.edu 37 11 17793787 17793787 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001112741.1 +1 reviewed p.T382 0.990 54 0% 61 31.1% 0 - - - - HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels ANO3 63982 genome.wustl.edu 37 11 26655760 26655760 + Missense_Mutation SNP G G C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_031418.2 +1 validated p.R628P 1.000 162 0% 42 21.4% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) NULL NAT10 55226 genome.wustl.edu 37 11 34133706 34133706 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024662.2 +1 validated p.R103H 1.000 204 0% 88 33% 12 33.3% probably_damaging(1) tolerated(0.11) deleterious(0.772) NULL RAG1 5896 genome.wustl.edu 37 11 36597145 36597145 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000448.2 +1 reviewed p.R764H 1.000 121 0% 54 24.1% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) NULL DGKZ 8525 genome.wustl.edu 37 11 46393321 46393321 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001105540.1 +1 reviewed p.P464L 1.000 58 0% 95 20% 8 50% benign(0) tolerated(0.31) neutral(0.027) NULL MADD 8567 genome.wustl.edu 37 11 47330219 47330219 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003682.3 +1 reviewed p.S1279 1.000 100 0% 69 23.2% 15 40% - - - NULL MADD 8567 genome.wustl.edu 37 11 47345320 47345320 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003682.3 +1 reviewed p.T1492 1.000 291 0% 179 28.5% 18 38.8% - - - NULL PTPRJ 5795 genome.wustl.edu 37 11 48177607 48177607 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002843.3 +1 reviewed p.R1125H 1.000 177 0% 77 14.3% 5 20% probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMPfam_Y_phosphatase,HMMSmart_PTPc,superfamily_SSF52799 ENSG00000230416 0 genome.wustl.edu 37 11 56216613 56216613 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000415874 +1 known p.T156A 0.001 83 3.6% 32 12.5% 0 - - - - HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like TNKS1BP1 85456 genome.wustl.edu 37 11 57087670 57087670 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_033396.2 -1 validated p.T204M 0.000 90 0% 130 32.3% 28 32.1% benign(0.235) tolerated(0.08) neutral(0.324) NULL LPXN 9404 genome.wustl.edu 37 11 58317335 58317335 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001143995.1 -1 reviewed p.V227 1.000 211 0% 59 22% 9 11.1% - - - HMMPfam_LIM,HMMSmart_LIM,PatternScan_LIM_DOMAIN_1,superfamily_SSF57716 MPEG1 219972 genome.wustl.edu 37 11 58979321 58979321 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001039396.1 -1 validated p.R340C 0.128 123 0% 71 14.1% 3 0% probably_damaging(0.966) deleterious(0.01) deleterious(0.814) HMMPfam_MACPF,HMMSmart_MACPF MS4A12 54860 genome.wustl.edu 37 11 60264857 60264857 + Silent SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_017716.2 +1 reviewed p.P22 0.002 231 0% 243 19.3% 0 - - - - NULL MS4A10 341116 genome.wustl.edu 37 11 60557840 60557840 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_206893.3 +1 validated p.R11H 0.000 78 0% 75 20% 0 - benign(0) tolerated(0.11) neutral(0.272) NULL CD6 923 genome.wustl.edu 37 11 60783215 60783215 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006725.3 +1 validated p.P473L 0.144 288 0% 294 21.1% 7 14.2% benign(0.004) deleterious(0) neutral(0.445) NULL ENSG00000251217 0 genome.wustl.edu 37 11 60783694 60783694 + RNA SNP T T C rs188849132 by1000genomes TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000505761 -1 known NULL 0.487 3 0.000 6 1.000 0 - - - - - VPS37C 55048 genome.wustl.edu 37 11 60901616 60901616 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_017966.4 -1 validated p.N53D 1.000 68 0% 67 20.9% 9 33.3% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_Mod_r TUT1 64852 genome.wustl.edu 37 11 62342979 62342979 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_022830.2 -1 reviewed p.R738W 0.004 78 0% 112 24.1% 18 33.3% possibly_damaging(0.487) deleterious(0) deleterious(0.607) NULL TUT1 64852 genome.wustl.edu 37 11 62343264 62343264 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_022830.2 -1 reviewed p.R643W 0.016 289 0% 267 16.5% 12 41.6% probably_damaging(1) tolerated(0.09) deleterious(0.796) NULL MTA2 9219 genome.wustl.edu 37 11 62362777 62362777 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004739.2 -1 reviewed p.R481Q 0.995 175 0% 199 23.1% 70 20% possibly_damaging(0.843) tolerated(0.3) neutral(0.352) NULL NRXN2 9379 genome.wustl.edu 37 11 64434791 64434791 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015080.2 -1 reviewed p.R577W 1.000 76 0% 72 29.2% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2 PYGM 5837 genome.wustl.edu 37 11 64523005 64523005 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005609.2 -1 reviewed p.T229M 0.998 176 0% 228 26.8% 0 - probably_damaging(0.997) tolerated(0.14) deleterious(0.716) HMMPfam_Phosphorylase,superfamily_SSF53756 CDCA5 113130 genome.wustl.edu 37 11 64847107 64847107 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_080668.3 -1 validated p.D132 0.001 32 0% 46 23.9% 5 20% - - - HMMPfam_Sororin MAP3K11 4296 genome.wustl.edu 37 11 65373232 65373232 + Missense_Mutation SNP C C A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002419.3 -1 reviewed p.G611C 1.000 160 0.6% 162 24.1% 22 31.8% probably_damaging(1) deleterious(0) deleterious(0.945) NULL MUS81 80198 genome.wustl.edu 37 11 65631995 65631995 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_025128.4 +1 validated p.R363C 0.007 204 0% 234 19.7% 22 22.7% probably_damaging(0.98) deleterious(0.01) deleterious(0.830) HMMPfam_ERCC4,superfamily_Restrict_endonuc_II-like_core CATSPER1 117144 genome.wustl.edu 37 11 65792903 65792903 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_053054.3 -1 reviewed p.G316 0.000 848 0% 806 19.1% 0 - - - - superfamily_Voltage-gated potassium channels PC 5091 genome.wustl.edu 37 11 66616797 66616797 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000920.3 -1 reviewed p.A1064 0.951 42 0% 62 29% 12 25% - - - HMMPfam_PYC_OADA PC 5091 genome.wustl.edu 37 11 66617871 66617871 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000920.3 -1 reviewed p.A846 0.352 85 0% 145 27.6% 7 28.5% - - - superfamily_SSF51569 CABP4 57010 genome.wustl.edu 37 11 67223844 67223844 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_145200.3 +1 reviewed p.M158V 1.000 105 0% 119 26.9% 4 50% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMSmart_SM00054,HMMPfam_efhand,superfamily_EF-hand PITPNM1 9600 genome.wustl.edu 37 11 67261262 67261262 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004910.2 -1 validated p.G1019S 1.000 24 0% 26 26.9% 37 40.5% probably_damaging(0.99) tolerated(0.59) neutral(0.446) superfamily_HAD-like MRGPRD 116512 genome.wustl.edu 37 11 68748046 68748046 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_198923.2 -1 validated p.R137Q 0.015 111 0% 116 28.4% 0 - benign(0.295) deleterious(0.04) neutral(0.441) HMMPfam_7tm_1,superfamily_SSF81321 NUMA1 4926 genome.wustl.edu 37 11 71726933 71726933 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006185.2 -1 validated p.L539P 0.015 193 0.5% 186 27.4% 33 45.4% probably_damaging(0.983) tolerated(0.07) deleterious(0.748) NULL LRTOMT 220074 genome.wustl.edu 37 11 71800165 71800165 + Missense_Mutation SNP G G T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_145309.2 +1 validated p.Q12H 1.000 222 0% 131 20.6% 24 29.1% probably_damaging(0.983) deleterious(0.02) deleterious(0.812) NULL INPPL1 3636 genome.wustl.edu 37 11 71946494 71946494 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001567.3 +1 reviewed p.Y886 0.995 49 0% 90 16.7% 43 9.3% - - - NULL SERPINH1 871 genome.wustl.edu 37 11 75277692 75277692 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001235.2 +1 reviewed p.E100K 0.977 18 5.6% 23 39.1% 115 32.1% benign(0.001) tolerated(0.15) neutral(0.241) HMMPfam_Serpin,HMMSmart_SM00093,superfamily_Serpins CAPN5 726 genome.wustl.edu 37 11 76832988 76832988 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004055.4 +1 reviewed p.R499H 0.965 68 0% 66 30.3% 34 47% benign(0.048) tolerated(0.58) neutral(0.008) superfamily_Peptidase_C2,superfamily_C2_CaLB MYO7A 4647 genome.wustl.edu 37 11 76885835 76885835 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000260.3 +1 reviewed p.R657W 0.998 111 0% 121 26.4% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases GDPD4 220032 genome.wustl.edu 37 11 76944177 76944177 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_182833.1 -1 provisional p.V428I 0.006 205 0% 64 29.7% 0 - benign(0) tolerated(0.26) neutral(0.034) HMMPfam_GDPD,superfamily_PLC-like_Pdiesterase_TIM-brl C11orf67 28971 genome.wustl.edu 37 11 77583260 77583260 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024684.2 +1 predicted p.I90V 1.000 265 0% 116 11.2% 42 14.2% benign(0) tolerated(0.57) neutral(0.006) HMMPfam_DUF498,superfamily_Hypothetical protein MT938 (MTH938) ODZ4 26011 genome.wustl.edu 37 11 78614398 78614398 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001098816.2 -1 validated p.G222R 0.976 32 0% 40 15% 0 - probably_damaging(0.976) tolerated(0.17) deleterious(0.477) HMMPfam_Ten_N TMEM135 65084 genome.wustl.edu 37 11 87020588 87020588 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_022918.3 +1 validated p.C270 1.000 101 0% 38 15.8% 4 25% - - - NULL NAALAD2 10003 genome.wustl.edu 37 11 89896526 89896526 + Missense_Mutation SNP C C A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005467.3 +1 reviewed p.A375D 0.857 110 0% 150 31.3% 0 - unknown(0) deleterious(0) - HMMPfam_Peptidase_M28,superfamily_Zn-dependent exopeptidases ENDOD1 23052 genome.wustl.edu 37 11 94861564 94861564 + Silent SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015036.2 +1 validated p.L108 0.001 108 0% 62 17.7% 3 0% - - - HMMPfam_Endonuclease_NS,HMMSmart_NUC,superfamily_SSF54060 PIH1D2 120379 genome.wustl.edu 37 11 111943844 111943844 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_138789.3 -1 validated p.L19 0.997 238 0% 143 16.1% 4 0% - - - HMMPfam_PIH1 BCO2 83875 genome.wustl.edu 37 11 112064224 112064224 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_031938.4 +1 validated p.A107 0.396 247 0% 109 22% 1 0% unknown(0) - - HMMPfam_RPE65 ZW10 9183 genome.wustl.edu 37 11 113614598 113614598 + Silent SNP G G T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004724.2 -1 reviewed p.I479 1.000 285 0% 136 34.6% 9 33.3% - - - HMMPfam_Zw10 DSCAML1 57453 genome.wustl.edu 37 11 117387201 117387201 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020693.2 -1 provisional p.S648 0.404 135 0% 114 28.9% 0 - - - - HMMSmart_SM00409,superfamily_Immunoglobulin VPS11 55823 genome.wustl.edu 37 11 118949009 118949009 + Nonsense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000300793 +1 known p.R629* 0.424 83 0% 107 22.4% 19 0% - - - NULL CBL 867 genome.wustl.edu 37 11 119155972 119155972 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005188.2 +1 reviewed p.P546L 1.000 229 0% 137 27.7% 1 0% probably_damaging(0.999) tolerated(0.21) deleterious(0.534) NULL POU2F3 25833 genome.wustl.edu 37 11 120170334 120170334 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014352.2 +1 validated p.D87G 1.000 201 0% 73 24.7% 0 - benign(0.07) deleterious(0) neutral(0.450) NULL TECTA 7007 genome.wustl.edu 37 11 120998718 120998718 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005422.2 +1 reviewed p.E678K 1.000 84 0% 81 19.8% 0 - benign(0.158) tolerated(0.38) neutral(0.032) HMMSmart_SM00215 VWA5A 4013 genome.wustl.edu 37 11 124012409 124012409 + Missense_Mutation SNP C C A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001130142.1 +1 validated p.L662I 0.000 324 0% 134 21.6% 45 71.1% benign(0.03) tolerated(0.2) neutral(0.051) NULL OR8D2 283160 genome.wustl.edu 37 11 124189609 124189609 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001002918.1 -1 provisional p.R162H 0.001 109 0% 47 29.8% 0 - benign(0.001) tolerated(0.18) neutral(0.056) HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like FLI1 2313 genome.wustl.edu 37 11 128680830 128680830 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002017.3 +1 validated p.V436I 0.999 258 0% 157 26.1% 9 0% possibly_damaging(0.893) tolerated(0.24) neutral(0.389) NULL KCNJ5 3762 genome.wustl.edu 37 11 128781427 128781427 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000890.3 +1 reviewed p.R87C 1.000 227 0% 212 25.5% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_IRK,superfamily_SSF81324 ARHGAP32 9743 genome.wustl.edu 37 11 128844224 128844224 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001142685.1 -1 validated p.C942 0.000 574 0% 291 24.4% 1 100% - - - NULL GLB1L3 112937 genome.wustl.edu 37 11 134182366 134182366 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001080407.2 +1 validated p.A471T 0.001 53 0% 44 25% 0 - benign(0.124) deleterious(0.01) neutral(0.416) NULL WNK1 65125 genome.wustl.edu 37 12 922855 922855 + Silent SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018979.3 +1 reviewed p.A269 0.998 169 0% 95 30.5% 4 25% - - - superfamily_Kinase_like,HMMPfam_Pkinase FBXL14 144699 genome.wustl.edu 37 12 1702232 1702232 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_152441.2 -1 validated p.T334M 1.000 159 0% 190 23.7% 13 53.8% probably_damaging(0.999) tolerated(0.07) deleterious(0.809) superfamily_SSF52047 CACNA1C 775 genome.wustl.edu 37 12 2224680 2224680 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_199460.2 +1 reviewed p.R114W 1.000 24 0% 31 29% 1 0% probably_damaging(0.966) deleterious(0) deleterious(0.853) superfamily_Voltage-gated potassium channels FOXM1 2305 genome.wustl.edu 37 12 2968422 2968422 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_202002.1 -1 validated p.P596 0.010 36 2.8% 45 28.9% 15 33.3% - - - NULL TEAD4 7004 genome.wustl.edu 37 12 3103999 3103999 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003213.2 +1 reviewed p.T23A 0.989 61 0% 68 20.6% 10 40% benign(0) tolerated(0.86) neutral(0.001) HMMPfam_TEA C12orf4 57102 genome.wustl.edu 37 12 4609376 4609376 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020374.2 -1 predicted p.I456M 0.958 179 0% 52 19.2% 8 25% probably_damaging(0.978) deleterious(0) deleterious(0.865) HMMPfam_DUF2362 KCNA5 3741 genome.wustl.edu 37 12 5154556 5154556 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002234.2 +1 reviewed p.R415C 1.000 223 0% 306 25.8% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels GAPDH 2597 genome.wustl.edu 37 12 6646132 6646132 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002046.3 +1 reviewed p.V95I 1.000 143 0% 207 18.8% 3323 43.8% benign(0.006) tolerated(0.19) neutral(0.050) HMMPfam_Gp_dh_N,superfamily_NAD(P)-binding Rossmann-fold domains CD163 9332 genome.wustl.edu 37 12 7635247 7635247 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004244.4 -1 validated p.R1080Q 0.000 200 0% 74 25.7% 16 0% possibly_damaging(0.778) tolerated(0.19) neutral(0.340) NULL FOXJ2 55810 genome.wustl.edu 37 12 8200767 8200767 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018416.2 +1 validated p.P369 0.399 76 0% 73 28.8% 7 42.8% - - - NULL MFAP5 8076 genome.wustl.edu 37 12 8803161 8803161 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003480.2 -1 reviewed p.C91Y 0.999 207 0% 107 27.1% 16 12.5% possibly_damaging(0.901) deleterious(0) deleterious(0.801) HMMPfam_MAGP KLRG1 10219 genome.wustl.edu 37 12 9147869 9147869 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005810.3 +1 reviewed p.T114 0.000 130 0% 29 17.2% 1 0% - - - HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like KLRC4 8302 genome.wustl.edu 37 12 10562004 10562004 + Missense_Mutation SNP C C A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_013431.2 -1 reviewed p.K57N 0.001 472 0% 205 29.3% 4 0% probably_damaging(0.966) tolerated(0.05) deleterious(0.753) NULL WBP11 51729 genome.wustl.edu 37 12 14953706 14953706 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_016312.2 -1 reviewed p.R26W 1.000 49 0% 80 23.7% 23 30.4% benign(0.071) deleterious(0.04) neutral(0.354) HMMPfam_Wbp11 PLCZ1 89869 genome.wustl.edu 37 12 18841041 18841041 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_033123.2 -1 provisional p.R525C 0.990 68 0% 31 19.4% 0 - benign(0.128) deleterious(0.04) neutral(0.359) HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB) PDE3A 5139 genome.wustl.edu 37 12 20833200 20833200 + Nonsense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000921.3 +1 validated p.Q1141* 1.000 59 0% 32 15.6% 2 0% - - - NULL CAPRIN2 65981 genome.wustl.edu 37 12 30862860 30862860 + Silent SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001002259.1 -1 validated p.S1120 0.953 123 0% 69 26.1% 5 20% - - - HMMPfam_C1q,HMMSmart_SM00110,superfamily_TNF-like H3F3C 440093 genome.wustl.edu 37 12 31944715 31944715 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001013699.2 -1 validated p.R129Q 1.000 346 0.3% 327 28.4% 191 0% benign(0.024) - - HMMSmart_H3,HMMPfam_Histone,superfamily_Histone-fold RAPGEF3 10411 genome.wustl.edu 37 12 48143757 48143757 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001098531.2 -1 validated p.A258V 1.000 507 0.2% 380 22.6% 7 28.5% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMSmart_SM00100,superfamily_cAMP-binding domain-like ENSG00000135477 0 genome.wustl.edu 37 12 52652058 52652058 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000257935 -1 known p.T94A 0.955 307 0% 342 27.5% 0 - - - - NULL KRT72 140807 genome.wustl.edu 37 12 52985319 52985319 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_080747.2 -1 reviewed p.E298K 0.995 478 0% 395 26.6% 0 - benign(0.002) deleterious(0.01) neutral(0.406) HMMPfam_Filament PCBP2 5094 genome.wustl.edu 37 12 53865487 53865487 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005016.5 +1 reviewed p.A320 1.000 101 0% 63 33.3% 485 23.7% - - - HMMSmart_KH,HMMPfam_KH_1,superfamily_SSF54791 PHC1P1 653441 genome.wustl.edu 37 12 55806411 55806411 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000326184 -1 known p.A704T 0.075 154 0% 177 27.7% 1 0% - - - NULL LOC100288280 100288280 genome.wustl.edu 37 12 55808279 55808279 + Missense_Mutation SNP C C G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 XM_002343188.1 +1 model p.L34V 1.000 261 0% 304 19.4% 6 0% - - - NULL DNAJC14 85406 genome.wustl.edu 37 12 56221316 56221316 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_032364.5 -1 validated p.R376H 0.008 88 0% 126 24.6% 11 27.2% benign(0.008) tolerated(0.4) neutral(0.016) NULL PAN2 9924 genome.wustl.edu 37 12 56716264 56716264 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001127460.2 -1 reviewed p.G884 0.015 86 0% 87 31% 14 57.1% - - - HMMPfam_UCH,superfamily_Cysteine proteinases GLS2 27165 genome.wustl.edu 37 12 56867031 56867031 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_013267.2 -1 reviewed p.R477H 1.000 238 0% 237 21.1% 0 - probably_damaging(1) deleterious(0.01) deleterious(0.905) superfamily_Ankyrin repeat MARS 4141 genome.wustl.edu 37 12 57910095 57910095 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004990.2 +1 reviewed p.A844V 0.020 170 0.6% 229 19.7% 82 28% benign(0) tolerated(0.28) neutral(0.032) superfamily_S15/NS1_bind KIF5A 3798 genome.wustl.edu 37 12 57960921 57960921 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004984.2 +1 reviewed p.R172C 1.000 232 0% 150 22% 0 - probably_damaging(1) deleterious(0.02) deleterious(0.883) HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases AGAP2 116986 genome.wustl.edu 37 12 58125358 58125358 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001122772.1 -1 validated p.R674Q 1.000 168 0% 309 26.5% 6 0% probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_PH domain-like CCT2 10576 genome.wustl.edu 37 12 69991840 69991840 + Missense_Mutation SNP G G T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006431.2 +1 reviewed p.A442S 1.000 104 1% 32 21.9% 139 28% benign(0.283) deleterious(0.03) neutral(0.452) HMMPfam_Cpn60_TCP1,superfamily_GroEL equatorial domain-like RAB3IP 117177 genome.wustl.edu 37 12 70149204 70149204 + Silent SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_175623.2 +1 validated p.L22 1.000 172 0% 216 20.4% 11 45.4% - - - NULL CAPS2 84698 genome.wustl.edu 37 12 75692739 75692739 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_032606.3 -1 validated p.R307C 1.000 118 0% 125 24.8% 0 - probably_damaging(0.997) deleterious(0) deleterious(0.911) NULL ZDHHC17 23390 genome.wustl.edu 37 12 77208972 77208972 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015336.2 +1 validated p.A197V 1.000 92 0% 30 13.3% 1 0% probably_damaging(0.995) deleterious(0.01) deleterious(0.863) HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat PPFIA2 8499 genome.wustl.edu 37 12 81732959 81732959 + Nonsense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003625.2 -1 reviewed p.R850* 1.000 210 0% 80 26.3% 0 - - - - NULL CEP290 80184 genome.wustl.edu 37 12 88456492 88456492 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_025114.3 -1 reviewed p.R2112W 0.751 291 0% 100 30% 6 50% probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL KERA 11081 genome.wustl.edu 37 12 91449558 91449558 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_007035.3 -1 reviewed p.N167 0.995 49 0% 36 13.9% 0 - - - - HMMPfam_LRR_1,superfamily_SSF52058 EEA1 8411 genome.wustl.edu 37 12 93244955 93244955 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003566.3 -1 validated p.R244C 1.000 172 0% 68 26.5% 1 0% probably_damaging(1) deleterious(0.01) deleterious(0.905) NULL VEZT 55591 genome.wustl.edu 37 12 95676321 95676321 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_017599.3 +1 validated p.P410L 0.156 220 0% 81 12.3% 21 14.2% probably_damaging(0.98) tolerated(0.34) neutral(0.447) NULL AMDHD1 144193 genome.wustl.edu 37 12 96354191 96354191 + Silent SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_152435.2 +1 validated p.T201 0.003 163 0% 200 18.5% 0 - - - - superfamily_Composite domain of metallo-dependent hydrolases,superfamily_Metallo-dependent hydrolases UHRF1BP1L 23074 genome.wustl.edu 37 12 100452770 100452770 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015054.1 -1 validated p.R762Q 1.000 90 1.1% 73 37% 4 50% probably_damaging(1) deleterious(0.02) deleterious(0.883) NULL PARPBP 55010 genome.wustl.edu 37 12 102542066 102542066 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000417507 +1 known p.L71P 0.927 77 0% 69 23.2% 1 0% probably_damaging(1) deleterious(0.01) deleterious(0.905) NULL RIC8B 55188 genome.wustl.edu 37 12 107219523 107219523 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018157.2 +1 validated p.R254H 1.000 509 0% 175 20.6% 3 0% probably_damaging(1) tolerated(0.11) deleterious(0.772) superfamily_ARM-type_fold,HMMPfam_Ric8 BTBD11 121551 genome.wustl.edu 37 12 107914351 107914351 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001018072.1 +1 validated p.S408L 0.997 150 0% 43 30.2% 2 0% benign(0.139) tolerated(0.39) neutral(0.028) NULL ACACB 32 genome.wustl.edu 37 12 109647014 109647014 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001093.3 +1 reviewed p.P1035 0.014 47 0% 22 22.7% 0 - - - - HMMPfam_ACC_central CUX2 23316 genome.wustl.edu 37 12 111785522 111785522 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015267.3 +1 validated p.S1285N 0.000 59 0% 62 17.7% 0 - benign(0.014) tolerated(0.42) neutral(0.015) NULL TRAFD1 10906 genome.wustl.edu 37 12 112589815 112589815 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001143906.1 +1 validated p.R497Q 0.000 105 0% 96 20.8% 44 22.7% benign(0.021) tolerated(0.12) neutral(0.262) NULL SLC24A6 80024 genome.wustl.edu 37 12 113754448 113754448 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024959.2 -1 validated p.R292 1.000 130 0% 149 24.8% 8 25% - - - NULL TBX3 6926 genome.wustl.edu 37 12 115109852 115109852 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_016569.3 -1 reviewed p.A676T 0.978 29 0% 33 24.2% 2 0% benign(0.004) tolerated(0.34) neutral(0.023) NULL MED13L 23389 genome.wustl.edu 37 12 116434448 116434448 + Silent SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015335.3 -1 validated p.P943 1.000 123 0% 47 40.4% 5 60% - - - NULL NOS1 4842 genome.wustl.edu 37 12 117655919 117655919 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000620.2 -1 reviewed p.Y1407 0.916 340 0% 194 22.7% 0 - - - - NULL CCDC64 92558 genome.wustl.edu 37 12 120499537 120499537 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_207311.2 +1 validated p.L223 1.000 107 0% 44 18.2% 1 100% - - - NULL GCN1L1 10985 genome.wustl.edu 37 12 120587780 120587780 + Silent SNP G G A rs145122247 by1000genomes TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006836.1 -1 validated p.H1459 0.138 107 0% 94 11.7% 15 26.6% - - - HMMPfam_HEAT,superfamily_ARM repeat SETD1B 23067 genome.wustl.edu 37 12 122252765 122252765 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015048.1 +1 validated p.R882C 1.000 118 0% 148 26.4% 6 50% probably_damaging(0.997) - - NULL HIP1R 9026 genome.wustl.edu 37 12 123343685 123343685 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003959.1 +1 validated p.R746W 0.006 16 0% 34 26.5% 20 5% possibly_damaging(0.846) deleterious(0.02) deleterious(0.708) NULL NCOR2 9612 genome.wustl.edu 37 12 124835278 124835278 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006312.3 -1 validated p.T1240 0.009 116 0% 144 33.3% 24 54.1% - - - NULL FZD10 11211 genome.wustl.edu 37 12 130648122 130648122 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_007197.2 +1 reviewed p.T212M 0.982 63 0% 101 32.7% 4 0% possibly_damaging(0.643) tolerated(0.12) deleterious(0.486) NULL EP400 57634 genome.wustl.edu 37 12 132490746 132490746 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015409.3 +1 validated p.E1008K 0.994 115 0% 45 33.3% 1 0% unknown(0) - - superfamily_SSF52540 POLE 5426 genome.wustl.edu 37 12 133218274 133218274 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006231.2 -1 validated p.P1779 0.000 166 0% 135 28.9% 6 50% - - - HMMPfam_DUF1744 POLE 5426 genome.wustl.edu 37 12 133256789 133256789 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006231.2 -1 validated p.P102L 1.000 72 0% 107 18.7% 1 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_DNA_pol_B_exo,superfamily_RNaseH_fold POLE 5426 genome.wustl.edu 37 12 133257828 133257828 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006231.2 -1 validated p.R34C 1.000 168 0% 137 24.1% 1 100% probably_damaging(1) deleterious(0) deleterious(0.945) NULL CHFR 55743 genome.wustl.edu 37 12 133438137 133438137 + Missense_Mutation SNP G G T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018223.2 -1 validated p.P194T 0.002 320 0% 469 27.7% 11 27.2% benign(0.155) tolerated(0.22) neutral(0.056) NULL GJA3 2700 genome.wustl.edu 37 13 20717168 20717168 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_021954.3 -1 reviewed p.T87M 1.000 326 0% 452 29.4% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Connexin C1QTNF9B 387911 genome.wustl.edu 37 13 24470987 24470987 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001007537.1 -1 provisional p.G47R 1.000 731 0% 696 18.1% 0 - probably_damaging(0.993) deleterious(0) deleterious(0.895) HMMPfam_Collagen PARP4 143 genome.wustl.edu 37 13 25075781 25075781 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006437.3 -1 reviewed p.A108 0.000 215 0% 240 22.5% 13 30.7% - - - NULL RPL21 6144 genome.wustl.edu 37 13 27830466 27830466 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000982.3 +1 reviewed p.R130C 1.000 70 0% 115 10.4% 154 4.5% benign(0.02) deleterious(0.03) neutral(0.365) NULL SLC46A3 283537 genome.wustl.edu 37 13 29291951 29291951 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001135919.1 -1 validated p.Q62R 0.979 92 0% 143 27.3% 0 - benign(0.057) tolerated(0.17) neutral(0.062) HMMPfam_MFS_1 BRCA2 675 genome.wustl.edu 37 13 32911968 32911968 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000059.3 +1 reviewed p.C1159Y 0.003 139 0% 50 20% 0 - benign(0) tolerated(0.59) neutral(0.004) NULL SOHLH2 54937 genome.wustl.edu 37 13 36743177 36743177 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_017826.2 -1 validated p.A424 1.000 240 0% 108 21.3% 0 - - - - NULL FREM2 341640 genome.wustl.edu 37 13 39265791 39265791 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_207361.4 +1 reviewed p.V1437A 1.000 210 0% 129 20.9% 0 - possibly_damaging(0.839) tolerated(0.17) neutral(0.380) NULL ENSG00000170919 0 genome.wustl.edu 37 13 45965250 45965250 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000330825 +1 known p.S37 1.000 129 0% 159 25.2% 7 85.7% - - - NULL ENSG00000170919 0 genome.wustl.edu 37 13 45965346 45965346 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000330825 +1 known p.S69 1.000 38 0% 71 29.6% 32 9.3% - - - NULL LOC731932 731932 genome.wustl.edu 37 13 47033290 47033290 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 XM_001716667.2 -1 model p.G87S 0.067 314 0% 344 19.2% 0 - - - - NULL RB1 5925 genome.wustl.edu 37 13 49030385 49030385 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000321.2 +1 reviewed p.T620 0.620 126 0% 197 25.9% 15 40% - - - NULL WDFY2 115825 genome.wustl.edu 37 13 52234781 52234781 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_052950.3 +1 reviewed p.V63I 1.000 242 0.4% 86 30.2% 4 50% benign(0) tolerated(1) - superfamily_WD40 repeat-like VPS36 51028 genome.wustl.edu 37 13 52997740 52997740 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_016075.2 -1 validated p.Y270C 1.000 132 0% 123 29.3% 22 18.1% probably_damaging(1) deleterious(0) deleterious(0.945) "HMMPfam_EAP30,superfamily_""Winged helix"" DNA-binding domain" VPS36 51028 genome.wustl.edu 37 13 53000126 53000126 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_016075.2 -1 validated p.T239A 1.000 275 0% 219 19.2% 15 13.3% benign(0.025) tolerated(0.42) neutral(0.015) "HMMPfam_EAP30,superfamily_""Winged helix"" DNA-binding domain" CLN5 1203 genome.wustl.edu 37 13 77569200 77569200 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006493.2 +1 reviewed p.R108H 1.000 169 0% 226 11.1% 19 10.5% probably_damaging(1) deleterious(0) deleterious(0.945) NULL PTMAP5 150928 genome.wustl.edu 37 13 82264218 82264218 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000393073 +1 known p.V6I 0.800 34 0% 59 25.4% 42 0% - - - HMMPfam_Prothymosin CLDN10 9071 genome.wustl.edu 37 13 96205086 96205086 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006984.4 +1 reviewed p.T27A 1.000 70 0% 58 22.4% 0 - possibly_damaging(0.792) tolerated(0.11) deleterious(0.569) HMMPfam_PMP22_Claudin PCCA 5095 genome.wustl.edu 37 13 100953817 100953817 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000282.3 +1 reviewed p.R390H 1.000 297 0.3% 86 26.7% 22 50% benign(0.004) deleterious(0.02) neutral(0.383) HMMPfam_CPSase_L_D2,superfamily_SSF56059 TPP2 7174 genome.wustl.edu 37 13 103295702 103295702 + Silent SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003291.2 +1 reviewed p.T717 0.082 177 0% 46 23.9% 9 33.3% - - - NULL MYO16 23026 genome.wustl.edu 37 13 109792735 109792735 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015011.1 +1 validated p.R1370Q 0.664 6 0.000 17 0.294 0 - benign(0.08) deleterious(0) neutral(0.450) NULL MCF2L 23263 genome.wustl.edu 37 13 113719395 113719395 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001112732.1 +1 validated p.A308V 1.000 71 0% 84 25% 20 50% benign(0) tolerated(0.3) neutral(0.029) NULL TFDP1 7027 genome.wustl.edu 37 13 114288232 114288232 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_007111.4 +1 reviewed p.R168C 1.000 165 0% 231 29.9% 40 57.5% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_E2F_TDP,superfamily_SSF46785 ARHGEF40 55701 genome.wustl.edu 37 14 21549722 21549722 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018071.3 +1 validated p.R899W 0.659 22 0% 37 40.5% 3 66.6% probably_damaging(1) tolerated(0.05) deleterious(0.845) NULL CHD8 57680 genome.wustl.edu 37 14 21863126 21863126 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020920.3 -1 reviewed p.R1500C 0.998 52 0% 43 37.2% 21 47.6% probably_damaging(1) deleterious(0.01) deleterious(0.905) superfamily_P-loop containing nucleoside triphosphate hydrolases TOX4 9878 genome.wustl.edu 37 14 21961062 21961062 + Silent SNP T T A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014828.2 +1 validated p.A429 0.939 50 0% 44 20.5% 29 44.8% - - - NULL METTL3 56339 genome.wustl.edu 37 14 21967277 21967277 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_019852.3 -1 reviewed p.R508H 1.000 214 0% 149 27.5% 43 39.5% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_MT-A70 SALL2 6297 genome.wustl.edu 37 14 21992981 21992981 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005407.1 -1 validated p.R294Q 1.000 63 1.6% 101 28.7% 0 - possibly_damaging(0.532) tolerated(0.59) neutral(0.184) NULL LRP10 26020 genome.wustl.edu 37 14 23345196 23345196 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014045.3 +1 validated p.G347S 1.000 61 0% 104 16.3% 78 14.1% probably_damaging(1) deleterious(0.02) deleterious(0.883) HMMSmart_SM00192,superfamily_LDL receptor-like module RBM23 55147 genome.wustl.edu 37 14 23375466 23375466 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001077351.1 -1 reviewed p.S113 0.993 130 0% 89 32.6% 33 45.4% - - - NULL HAUS4 54930 genome.wustl.edu 37 14 23421814 23421816 + In_Frame_Del DEL AGG AGG - novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 AGG AGG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_017815.2 -1 reviewed p.L45in_frame_del 0.977:0.983:0.980 - - - - - - - - - NULL PSMB5 5693 genome.wustl.edu 37 14 23502644 23502644 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002797.3 -1 reviewed p.V146 0.998 158 0% 110 29.1% 168 36.3% - - - HMMPfam_Proteasome,superfamily_N-terminal nucleophile aminohydrolases (Ntn hydrolases) MYH7 4625 genome.wustl.edu 37 14 23883051 23883051 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000257.2 -1 reviewed p.L1903 1.000 325 0% 363 25.6% 0 - - - - HMMPfam_Myosin_tail_1 DHRS4L1 728635 genome.wustl.edu 37 14 24517919 24517919 + Missense_Mutation SNP T T G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001082488.1 +1 provisional p.L192V 1.000 380 0% 463 19.7% 0 - possibly_damaging(0.589) tolerated(0.07) deleterious(0.522) HMMPfam_adh_short,PatternScan_ADH_SHORT,superfamily_NAD(P)-binding Rossmann-fold domains CPNE6 9362 genome.wustl.edu 37 14 24543509 24543509 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006032.2 +1 reviewed p.E145K 0.998 178 0% 213 15.5% 0 - possibly_damaging(0.943) deleterious(0.01) deleterious(0.793) superfamily_C2 domain (Calcium/lipid-binding domain CaLB) NYNRIN 57523 genome.wustl.edu 37 14 24885655 24885655 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_025081.2 +1 validated p.R1567H 0.283 92 0% 116 29.3% 2 50% probably_damaging(0.999) deleterious(0.01) deleterious(0.896) NULL ARHGAP5 394 genome.wustl.edu 37 14 32623873 32623873 + Missense_Mutation SNP T T A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001030055.1 +1 reviewed p.S1410T 1.000 237 0% 80 21.2% 27 51.8% probably_damaging(0.981) deleterious(0.01) deleterious(0.831) HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP FAM179B 23116 genome.wustl.edu 37 14 45431843 45431843 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015091.2 +1 validated p.M73I 0.999 62 0% 44 34.1% 1 100% benign(0) tolerated(0.19) neutral(0.050) NULL FAM179B 23116 genome.wustl.edu 37 14 45431916 45431916 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015091.2 +1 validated p.R98W 0.990 38 0% 25 16% 1 100% probably_damaging(1) deleterious(0) deleterious(0.945) NULL NID2 22795 genome.wustl.edu 37 14 52534849 52534849 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_007361.3 -1 validated p.D87 1.000 110 0% 118 39% 0 - - - - NULL DDHD1 80821 genome.wustl.edu 37 14 53529719 53529719 + Nonsense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_030637.2 -1 validated p.R570* 0.024 221 0% 110 16.4% 6 16.6% - - - NULL MUDENG 55745 genome.wustl.edu 37 14 57753034 57753034 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018229.3 +1 validated p.A463T 0.998 215 0% 47 23.4% 13 46.1% benign(0) tolerated(1) - HMMPfam_Adap_comp_sub,superfamily_Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor C14orf37 145407 genome.wustl.edu 37 14 58605328 58605328 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001001872.2 -1 predicted p.L250P 0.001 179 0% 117 23.9% 2 50% benign(0.002) deleterious(0.01) neutral(0.406) NULL SYT16 83851 genome.wustl.edu 37 14 62547763 62547763 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_031914.2 +1 validated p.G402D 1.000 103 0% 41 29.3% 0 - possibly_damaging(0.952) tolerated(0.2) neutral(0.445) HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB SPTB 6710 genome.wustl.edu 37 14 65260207 65260207 + Missense_Mutation SNP C C A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001024858.2 -1 reviewed p.W725L 1.000 96 0% 61 23% 0 - probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMPfam_Spectrin,HMMSmart_SPEC,superfamily_Spectrin ZFYVE26 23503 genome.wustl.edu 37 14 68250089 68250089 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015346.3 -1 reviewed p.H1260 0.079 144 0% 55 27.3% 2 0% - - - NULL C14orf162 56936 genome.wustl.edu 37 14 70037336 70037336 + RNA SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NR_024630.1 -1 validated NULL 0.997 18 0% 51 27.5% 0 - - - - - SMOC1 64093 genome.wustl.edu 37 14 70442476 70442476 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001034852.1 +1 validated p.P141 0.056 345 0% 110 19.1% 1 100% - - - HMMPfam_Thyroglobulin_1,HMMSmart_SM00211,PatternScan_THYROGLOBULIN_1_1,superfamily_Thyroglobulin type-1 domain FAM161B 145483 genome.wustl.edu 37 14 74411430 74411430 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_152445.1 -1 predicted p.T178M 0.966 49 0% 46 34.8% 1 0% benign(0.297) tolerated(0.12) neutral(0.353) HMMPfam_UPF0564 VRTN 55237 genome.wustl.edu 37 14 74824284 74824284 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018228.2 +1 validated p.S266 0.004 58 0% 66 22.7% 0 - - - - NULL BATF 10538 genome.wustl.edu 37 14 76012811 76012811 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006399.3 +1 reviewed p.E59K 1.000 40 0% 35 31.4% 32 18.7% probably_damaging(0.99) deleterious(0.01) deleterious(0.847) HMMSmart_BRLZ,HMMPfam_bZIP_1 C14orf118 55668 genome.wustl.edu 37 14 76644343 76644343 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000336993 +1 known p.R354H 0.513 379 0% 247 27.5% 3 33.3% - - - NULL KIAA1737 85457 genome.wustl.edu 37 14 77580238 77580238 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_033426.2 +1 validated p.F259 0.014 105 0% 67 23.9% 5 60% - - - NULL GSTZ1 2954 genome.wustl.edu 37 14 77791255 77791255 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_145870.2 +1 reviewed p.V20I 1.000 214 0% 219 18.3% 31 25.8% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_GST_N,superfamily_Thioredoxin-like GPR65 8477 genome.wustl.edu 37 14 88478073 88478073 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003608.3 +1 validated p.T294 0.958 221 0.5% 61 19.7% 8 0% - - - superfamily_Family A G protein-coupled receptor-like BTBD7 55727 genome.wustl.edu 37 14 93712231 93712231 + Silent SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001002860.2 -1 validated p.A841 0.003 76 0% 54 25.9% 2 0% - - - NULL BTBD7 55727 genome.wustl.edu 37 14 93720031 93720031 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001002860.2 -1 validated p.R572C 1.000 216 0% 58 31% 2 100% probably_damaging(1) deleterious(0) deleterious(0.945) NULL DDX24 57062 genome.wustl.edu 37 14 94528486 94528486 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020414.3 -1 reviewed p.A400 0.163 148 0% 67 16.4% 50 44% - - - HMMPfam_DEAD,HMMSmart_DEXDc,superfamily_SSF52540 DICER1 23405 genome.wustl.edu 37 14 95599702 95599702 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_030621.3 -1 reviewed p.W32R 1.000 215 0% 85 20% 5 40% probably_damaging(0.998) deleterious(0) deleterious(0.919) NULL AK7 122481 genome.wustl.edu 37 14 96944832 96944832 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_152327.2 +1 validated p.E529G 1.000 187 0% 106 19.8% 2 50% benign(0.362) deleterious(0.01) deleterious(0.521) superfamily_P-loop containing nucleoside triphosphate hydrolases SETD3 84193 genome.wustl.edu 37 14 99865430 99865430 + Silent SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_032233.2 -1 validated p.L457 0.666 123 0% 99 17.2% 34 50% - - - HMMPfam_Rubis-subs-bind,superfamily_RuBisCo LSMT C-terminal substrate-binding domain EML1 2009 genome.wustl.edu 37 14 100406438 100406438 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001008707.1 +1 reviewed p.R832C 1.000 180 0.6% 180 25% 5 20% probably_damaging(0.996) deleterious(0.01) deleterious(0.867) HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40 RTL1 388015 genome.wustl.edu 37 14 101351019 101351019 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001134888.2 -1 reviewed p.T36M 0.000 51 0% 81 27.2% 0 - probably_damaging(0.999) tolerated(0.17) deleterious(0.549) NULL KIF26A 26153 genome.wustl.edu 37 14 104642378 104642378 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015656.1 +1 validated p.A1085T 0.999 4 0.000 11 0.364 1 0% possibly_damaging(0.915) deleterious(0.01) deleterious(0.772) NULL PLD4 122618 genome.wustl.edu 37 14 105398157 105398157 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_138790.2 +1 validated p.A331T 0.994 41 0% 67 34.3% 3 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_PLD_envelope,superfamily_SSF56024 AHNAK2 113146 genome.wustl.edu 37 14 105407883 105407883 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_138420.2 -1 validated p.T4635 0.003 77 0% 117 26.5% 0 - - - - NULL AHNAK2 113146 genome.wustl.edu 37 14 105411137 105411137 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_138420.2 -1 validated p.G3551S 0.000 147 0% 329 26.1% 0 - possibly_damaging(0.864) tolerated(0.37) neutral(0.354) NULL TMEM121 80757 genome.wustl.edu 37 14 105995779 105995779 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_025268.2 +1 provisional p.S203N 1.000 30 0% 48 37.5% 2 0% benign(0.039) deleterious(0) neutral(0.447) NULL IGHE 3497 genome.wustl.edu 37 14 106066698 106066698 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000390541 -1 known p.T331M 0.006 22 0% 40 20% 0 - probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMPfam_C1-set,superfamily_SSF48726 IGHA1 3493 genome.wustl.edu 37 14 106174745 106174745 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000390547 -1 known p.H86 0.000 203 0% 251 21.5% 6071 0% - - - HMMPfam_C1-set,HMMSmart_IGc1,superfamily_SSF48726 NIPA2 81614 genome.wustl.edu 37 15 23006736 23006736 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001008860.2 -1 reviewed p.A190T 1.000 89 0% 76 19.7% 32 43.7% possibly_damaging(0.53) deleterious(0) deleterious(0.623) HMMPfam_DUF803 C15orf2 23742 genome.wustl.edu 37 15 24922694 24922694 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018958.2 +1 reviewed p.N560 0.000 354 0% 333 24.9% 0 - - - - NULL HERC2 8924 genome.wustl.edu 37 15 28459326 28459326 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004667.4 -1 reviewed p.R2151C 0.996 48 0% 94 19.1% 3 33.3% probably_damaging(1) deleterious(0) deleterious(0.945) NULL HERC2 8924 genome.wustl.edu 37 15 28483809 28483809 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004667.4 -1 reviewed p.D1229 0.881 276 0% 130 21.5% 1 0% - - - HMMPfam_Cyt-b5,superfamily_Cytochrome b5-like heme/steroid binding domain LOC728310 728310 genome.wustl.edu 37 15 29092258 29092258 + RNA SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 XR_078490.1 -1 model NULL 0.060 39 0% 126 23% 0 - - - - - FMN1 342184 genome.wustl.edu 37 15 33359032 33359032 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001103184.2 -1 validated p.D352N 1.000 143 0% 65 23.1% 2 0% unknown(0) deleterious(0) - NULL AQR 9716 genome.wustl.edu 37 15 35167018 35167018 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014691.2 -1 validated p.G1095 0.991 167 0% 36 19.4% 13 38.4% - - - superfamily_SSF52540 PAK6 56924 genome.wustl.edu 37 15 40568158 40568158 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001128628.1 +1 reviewed p.R637W 1.000 99 1% 136 29.4% 6 50% probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase DLL4 54567 genome.wustl.edu 37 15 41226896 41226896 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_019074.2 +1 reviewed p.R334H 1.000 163 0% 184 23.9% 3 0% possibly_damaging(0.517) tolerated(0.05) deleterious(0.519) HMMSmart_EGF_CA,HMMPfam_EGF,superfamily_SSF57196 RPAP1 26015 genome.wustl.edu 37 15 41827781 41827781 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015540.2 -1 reviewed p.A157V 1.000 171 0.6% 138 26.8% 3 33.3% probably_damaging(1) deleterious(0.01) deleterious(0.905) NULL MGA 23269 genome.wustl.edu 37 15 42052632 42052632 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001080541.2 +1 validated p.R2484W 0.997 200 0% 89 31.5% 5 60% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_HLH,HMMSmart_SM00353,superfamily_HLH helix-loop-helix DNA-binding domain EPB42 2038 genome.wustl.edu 37 15 43501570 43501570 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000119.2 -1 reviewed p.R275H 0.998 41 0% 37 37.8% 0 - probably_damaging(1) tolerated(0.07) deleterious(0.819) superfamily_SSF54001 FRMD5 84978 genome.wustl.edu 37 15 44166139 44166139 + Splice_Site SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000451277 -1 known e9-2 1.000 117 0% 71 23.9% 0 - - - - - DUOX2 50506 genome.wustl.edu 37 15 45394138 45394138 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014080.4 -1 reviewed p.E902K 0.996 330 0% 280 25.7% 0 - benign(0.056) tolerated(0.15) neutral(0.244) superfamily_EF-hand FBN1 2200 genome.wustl.edu 37 15 48730108 48730108 + Missense_Mutation SNP C C T rs181032147 by1000genomes TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000138.4 -1 reviewed p.R2057Q 0.998 234 0% 45 17.8% 2 0% probably_damaging(0.998) deleterious(0.01) deleterious(0.880) superfamily_TB module/8-cys domain,superfamily_Concanavalin A-like lectins/glucanases SLC27A2 11001 genome.wustl.edu 37 15 50515214 50515214 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003645.3 +1 reviewed p.R342Q 1.000 336 0% 143 23.1% 5 20% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like DMXL2 23312 genome.wustl.edu 37 15 51868279 51868279 + Missense_Mutation SNP C C A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015263.3 -1 validated p.V63L 1.000 142 0% 61 23% 0 - probably_damaging(0.994) tolerated(1) neutral(0.452) HMMSmart_SM00320,superfamily_WD40 repeat-like ONECUT1 3175 genome.wustl.edu 37 15 53081347 53081347 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004498.1 -1 provisional p.N245 1.000 104 0% 147 29.3% 0 - - - - NULL UNC13C 440279 genome.wustl.edu 37 15 54529830 54529830 + Missense_Mutation SNP G G A rs182809015 by1000genomes TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001080534.1 +1 provisional p.R1057Q 1.000 297 0% 123 22.8% 0 - probably_damaging(0.999) deleterious(0.04) deleterious(0.839) NULL NEDD4 4734 genome.wustl.edu 37 15 56208246 56208246 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_198400.2 -1 validated p.R262C 1.000 85 0% 66 19.7% 0 - unknown(0) deleterious(0) - NULL LIPC 3990 genome.wustl.edu 37 15 58834792 58834792 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000236.2 +1 reviewed p.H172 0.980 363 0% 223 23.3% 1 0% - - - HMMPfam_Lipase,superfamily_alpha/beta-Hydrolases NARG2 79664 genome.wustl.edu 37 15 60741812 60741812 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024611.4 -1 validated p.N452D 0.000 213 0% 94 35.1% 12 25% benign(0) tolerated(1) - NULL HERC1 8925 genome.wustl.edu 37 15 63967238 63967238 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003922.3 -1 reviewed p.A2383 0.135 172 0% 92 18.5% 1 0% - - - NULL CILP 8483 genome.wustl.edu 37 15 65489524 65489524 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003613.3 -1 reviewed p.R1034C 0.984 52 0% 54 24.1% 1 100% probably_damaging(0.99) deleterious(0) deleterious(0.886) NULL DIS3L 115752 genome.wustl.edu 37 15 66607510 66607510 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_133375.3 +1 validated p.D234 0.003 135 0% 43 27.9% 12 33.3% - - - NULL PAQR5 54852 genome.wustl.edu 37 15 69672256 69672256 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001104554.1 +1 validated p.R29H 1.000 295 0.3% 212 29.2% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) NULL ENSG00000245371 0 genome.wustl.edu 37 15 69690001 69690001 + RNA SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000500759 -1 known NULL 0.000 88 0% 113 20.4% 0 - - - - - LARP6 55323 genome.wustl.edu 37 15 71144020 71144020 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_197958.1 -1 validated p.S80 0.000 490 0% 515 19.4% 17 5.8% - - - NULL THSD4 79875 genome.wustl.edu 37 15 71535091 71535091 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024817.2 +1 provisional p.R190W 0.998 118 0% 40 25% 0 - probably_damaging(1) deleterious(0.02) deleterious(0.883) NULL THSD4 79875 genome.wustl.edu 37 15 72030270 72030270 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024817.2 +1 provisional p.P610 0.293 223 0% 157 28.7% 42 42.8% - - - NULL STOML1 9399 genome.wustl.edu 37 15 74277025 74277025 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004809.3 -1 provisional p.S326 0.724 62 0% 67 28.4% 8 50% - - - HMMPfam_SCP2,superfamily_Sterol carrier protein SCP SEMA7A 8482 genome.wustl.edu 37 15 74703101 74703101 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003612.3 -1 reviewed p.R622H 0.000 80 0% 103 29.1% 7 0% benign(0.005) tolerated(0.14) neutral(0.249) HMMSmart_IG,superfamily_SSF48726 CYP1A2 1544 genome.wustl.edu 37 15 75042381 75042381 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000761.3 +1 reviewed p.Q101R 1.000 41 0% 62 32.3% 0 - benign(0.365) deleterious(0.01) deleterious(0.522) HMMPfam_p450,superfamily_Cytochrome_P450 ULK3 25989 genome.wustl.edu 37 15 75131904 75131904 + Nonsense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001099436.1 -1 validated p.R283* 0.011 50 0% 60 13.3% 8 0% - - - HMMPfam_MIT,HMMSmart_SM00745,superfamily_Protein kinase-like (PK-like) PTPN9 5780 genome.wustl.edu 37 15 75798324 75798324 + Silent SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002833.2 -1 reviewed p.S220 0.906 116 0% 213 17.8% 7 14.2% - - - HMMPfam_CRAL_TRIO,HMMSmart_SEC14,superfamily_CRAL_TRIO_C TSPAN3 10099 genome.wustl.edu 37 15 77339192 77339192 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005724.5 -1 reviewed p.G249 0.000 149 0% 73 30.1% 313 44.4% - - - NULL KIAA1199 57214 genome.wustl.edu 37 15 81230234 81230234 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018689.1 +1 validated p.T1107 0.607 80 0% 36 27.8% 1 0% - - - NULL BTBD1 53339 genome.wustl.edu 37 15 83699002 83699002 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_025238.3 -1 reviewed p.R314Q 1.000 219 0% 102 30.4% 31 41.9% benign(0.057) tolerated(0.68) neutral(0.005) NULL DET1 55070 genome.wustl.edu 37 15 89056287 89056287 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_017996.3 -1 validated p.R527 1.000 105 0% 105 41% 11 27.2% - - - HMMPfam_Det1 POLG 5428 genome.wustl.edu 37 15 89861872 89861872 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001126131.1 -1 reviewed p.R1128C 1.000 112 0% 87 34.5% 24 20.8% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_DNA_pol_A,HMMSmart_POLAc,superfamily_SSF56672 PEX11A 8800 genome.wustl.edu 37 15 90227104 90227104 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003847.1 -1 provisional p.R83H 1.000 210 0% 112 28.6% 5 60% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_PEX11 ANPEP 290 genome.wustl.edu 37 15 90348390 90348390 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001150.2 -1 reviewed p.T272 0.001 594 0% 529 11.9% 2 0% - - - HMMPfam_Peptidase_M1,superfamily_SSF63737 IDH2 3418 genome.wustl.edu 37 15 90628113 90628113 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002168.2 -1 reviewed p.C402 0.958 132 0% 131 26.7% 601 39.4% - - - HMMPfam_Iso_dh,superfamily_Isocitrate/Isopropylmalate dehydrogenase-like TTLL13 440307 genome.wustl.edu 37 15 90799414 90799414 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001029964.2 +1 validated p.R197H 0.975 117 0% 116 36.2% 1 0% probably_damaging(0.982) deleterious(0) deleterious(0.871) HMMPfam_TTL,superfamily_SSF56059 FURIN 5045 genome.wustl.edu 37 15 91425099 91425099 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002569.2 +1 reviewed p.S792 1.000 17 0% 49 32.7% 49 55.1% - - - NULL RGMA 56963 genome.wustl.edu 37 15 93588910 93588910 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020211.2 -1 reviewed p.Q224R 1.000 90 0% 129 20.2% 4 75% probably_damaging(0.996) tolerated(0.2) deleterious(0.511) HMMPfam_RGM_C ASB7 140460 genome.wustl.edu 37 15 101152611 101152611 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_198243.2 +1 reviewed p.R64W 1.000 303 0% 149 27.5% 3 100% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat TMEM8A 58986 genome.wustl.edu 37 16 424033 424033 + Missense_Mutation SNP A A C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_021259.2 -1 validated p.M625R 1.000 84 0% 87 20.7% 84 45.2% probably_damaging(1) deleterious(0) deleterious(0.945) NULL WDR90 197335 genome.wustl.edu 37 16 716291 716291 + Missense_Mutation SNP C C T rs143767432 by1000genomes TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_145294.4 +1 provisional p.R1561C 0.920 44 0% 92 31.5% 18 66.6% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMSmart_SM00320,superfamily_WD40 repeat-like WDR24 84219 genome.wustl.edu 37 16 736816 736816 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_032259.2 -1 provisional p.A420 0.417 21 0% 43 20.9% 8 62.5% - - - NULL TPSB2 64499 genome.wustl.edu 37 16 1278758 1278758 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024164.5 -1 reviewed p.R241C 0.571 147 0% 184 14.7% 0 - unknown(0) - - HMMSmart_SM00020 CLCN7 1186 genome.wustl.edu 37 16 1499092 1499092 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001287.4 -1 reviewed p.G558R 1.000 63 0% 82 17.1% 54 25.9% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Voltage_CLC,superfamily_Cl-channel_core MAPK8IP3 23162 genome.wustl.edu 37 16 1816343 1816343 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015133.3 +1 reviewed p.G917R 0.998 39 0% 53 32.1% 11 27.2% benign(0.047) deleterious(0.01) neutral(0.409) NULL ZNF598 90850 genome.wustl.edu 37 16 2053673 2053673 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000431526 -1 known p.Q93 0.997 224 0% 348 25.9% 10 50% - - - NULL CASKIN1 57524 genome.wustl.edu 37 16 2239059 2239059 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020764.3 -1 validated p.A196T 1.000 150 0% 274 20.1% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK PRSS41 360226 genome.wustl.edu 37 16 2848492 2848492 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001135086.1 +1 provisional p.A3T 0.000 10 0% 25 40% 0 - - - - NULL PAQR4 124222 genome.wustl.edu 37 16 3021160 3021160 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_152341.3 +1 validated p.L57 0.991 87 0% 137 17.5% 7 0% - - - HMMPfam_HlyIII PAQR4 124222 genome.wustl.edu 37 16 3021651 3021651 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_152341.3 +1 validated p.R175Q 0.999 35 0% 69 21.7% 13 0% benign(0.015) tolerated(0.35) neutral(0.021) HMMPfam_HlyIII ZNF213 7760 genome.wustl.edu 37 16 3190916 3190916 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001134655.1 +1 validated p.P316 0.020 7 0.000 36 0.222 4 75% - - - superfamily_C2H2 and C2HC zinc fingers ZNF75A 7627 genome.wustl.edu 37 16 3363154 3363155 + Frame_Shift_Del DEL TA TA - novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 TA TA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_153028.2 +1 validated p.Y27fs 1.000:1.000 - - - - - - - - - HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box TRAP1 10131 genome.wustl.edu 37 16 3708861 3708861 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_016292.2 -1 validated p.A649V 0.000 89 0% 63 20.6% 136 19.1% benign(0) tolerated(0.12) neutral(0.261) HMMPfam_HSP90,superfamily_SSF110942 CREBBP 1387 genome.wustl.edu 37 16 3779704 3779704 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004380.2 -1 reviewed p.A1782T 1.000 131 0% 184 23.9% 20 45% probably_damaging(0.991) deleterious(0) deleterious(0.889) HMMPfam_zf-TAZ,HMMSmart_ZnF_TAZ,superfamily_TAZ_finger ABAT 18 genome.wustl.edu 37 16 8868846 8868846 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000663.4 +1 reviewed p.V352M 0.917 126 0% 103 17.5% 5 60% benign(0.029) tolerated(1) neutral(0.002) HMMPfam_Aminotran_3,PatternScan_AA_TRANSFER_CLASS_3,superfamily_PyrdxlP-dep_Trfase_major TEKT5 146279 genome.wustl.edu 37 16 10788644 10788644 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_144674.1 -1 provisional p.A29 0.000 90 0% 85 37.6% 0 - - - - NULL PRM2 5620 genome.wustl.edu 37 16 11369732 11369732 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000435245 -1 known p.S126 0.000 342 0% 345 21.7% 0 - - - - NULL RSL1D1 26156 genome.wustl.edu 37 16 11931650 11931650 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015659.2 -1 validated p.S489 0.000 245 0% 239 25.1% 60 45% - - - NULL NOMO1 23420 genome.wustl.edu 37 16 14970589 14970589 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014287.3 +1 reviewed p.A862V 0.997 650 0% 198 18.2% 47 17% possibly_damaging(0.615) deleterious(0.05) deleterious(0.559) NULL SMG1 23049 genome.wustl.edu 37 16 18823110 18823110 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015092.4 -1 reviewed p.P3627 0.000 375 0% 212 24.5% 7 0% - - - NULL SMG1 23049 genome.wustl.edu 37 16 18846466 18846466 + Missense_Mutation SNP G G T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015092.4 -1 reviewed p.P2693H 1.000 76 0% 30 43.3% 4 25% probably_damaging(0.997) tolerated(0.2) deleterious(0.515) NULL THUMPD1 55623 genome.wustl.edu 37 16 20750268 20750268 + Silent SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_017736.3 -1 validated p.S119 0.785 432 0.2% 317 25.6% 14 28.5% - - - NULL POLR3E 55718 genome.wustl.edu 37 16 22319510 22319510 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000418581 +1 known p.R4H 0.060 118 0% 138 25.4% 17 29.4% - - - HMMPfam_Sin_N GGA2 23062 genome.wustl.edu 37 16 23507074 23507074 + Silent SNP C C T rs193100017 by1000genomes TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015044.4 -1 reviewed p.S39 0.312 266 0% 240 21.7% 23 26% - - - HMMPfam_VHS,superfamily_ENTH_VHS,HMMSmart_VHS GTF3C1 2975 genome.wustl.edu 37 16 27518456 27518456 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001520.3 -1 validated p.R422W 1.000 97 0% 63 33.3% 5 40% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_B-block_TFIIIC KIAA0556 23247 genome.wustl.edu 37 16 27789939 27789939 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015202.2 +1 validated p.R1616W 0.639 122 0% 152 18.4% 10 60% probably_damaging(1) deleterious(0) deleterious(0.945) NULL CCDC101 112869 genome.wustl.edu 37 16 28601431 28601431 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_138414.2 +1 validated p.G102S 0.914 122 0% 113 30.1% 16 50% benign(0.036) tolerated(0.13) neutral(0.255) HMMPfam_DUF1325 SULT1A1 6817 genome.wustl.edu 37 16 28617425 28617425 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001055.2 -1 reviewed p.V243I 0.008 672 0% 771 15.2% 51 37.2% benign(0) tolerated(0.84) neutral(0.001) HMMPfam_Sulfotransfer_1,superfamily_P-loop containing nucleoside triphosphate hydrolases TAOK2 9344 genome.wustl.edu 37 16 29996541 29996541 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_016151.2 +1 validated p.R477H 1.000 44 0% 57 21.1% 19 36.8% probably_damaging(1) deleterious(0.01) deleterious(0.905) NULL ALDOA 226 genome.wustl.edu 37 16 30080687 30080687 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000034.2 +1 reviewed p.R201C 1.000 164 0% 237 17.3% 1449 22.3% benign(0.003) deleterious(0.01) neutral(0.406) HMMPfam_Glycolytic,superfamily_SSF51569 ZNF689 115509 genome.wustl.edu 37 16 30615983 30615983 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_138447.1 -1 provisional p.G369R 0.988 53 0% 101 22.8% 4 0% probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_SSF57667 SRCAP 10847 genome.wustl.edu 37 16 30749491 30749491 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006662.2 +1 validated p.S2710 0.974 52 1.9% 54 24.1% 27 40.7% - - - NULL HSD3B7 80270 genome.wustl.edu 37 16 30998292 30998292 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_025193.3 +1 reviewed p.P221 0.001 30 0% 43 25.6% 19 15.7% - - - HMMPfam_3Beta_HSD,superfamily_NAD(P)-bd ITGAX 3687 genome.wustl.edu 37 16 31383059 31383059 + Missense_Mutation SNP T T A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000887.3 +1 reviewed p.V705D 0.000 108 0% 111 23.4% 6 0% benign(0.016) deleterious(0.01) neutral(0.406) HMMPfam_Integrin_alpha2,superfamily_SSF69179 ABCC11 85320 genome.wustl.edu 37 16 48204045 48204045 + Missense_Mutation SNP T T A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_032583.3 -1 reviewed p.I1288F 1.000 94 0% 95 31.6% 0 - possibly_damaging(0.616) deleterious(0.03) deleterious(0.579) HMMPfam_ABC_tran,HMMSmart_SM00382,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases LONP2 83752 genome.wustl.edu 37 16 48368209 48368209 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_031490.2 +1 provisional p.P626 0.029 242 0% 128 18% 32 31.2% - - - superfamily_SSF52540 ADCY7 113 genome.wustl.edu 37 16 50325704 50325704 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001114.3 +1 reviewed p.R145W 0.360 201 0% 175 24.6% 3 33.3% benign(0.006) tolerated(0.2) neutral(0.049) NULL SLC6A2 6530 genome.wustl.edu 37 16 55734199 55734199 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001043.3 +1 reviewed p.T580M 0.000 232 0% 132 25.8% 1 0% benign(0.005) deleterious(0.04) neutral(0.349) HMMPfam_SNF SLC12A3 6559 genome.wustl.edu 37 16 56904129 56904129 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000339.2 +1 reviewed p.T241 0.003 70 0% 72 30.6% 0 - - - - HMMPfam_AA_permease ZNF319 57567 genome.wustl.edu 37 16 58031079 58031079 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020807.1 -1 provisional p.T364I 1.000 163 0% 191 22% 10 60% probably_damaging(1) tolerated(1) deleterious(0.500) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 CDH8 1006 genome.wustl.edu 37 16 61687935 61687935 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001796.2 -1 reviewed p.D659 0.967 56 0% 39 30.8% 0 - - - - HMMPfam_Cadherin_C TK2 7084 genome.wustl.edu 37 16 66551745 66551745 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004614.4 -1 reviewed p.S204L 0.057 296 0.3% 268 21.6% 15 53.3% benign(0.001) tolerated(0.27) neutral(0.034) HMMPfam_dNK,superfamily_P-loop containing nucleoside triphosphate hydrolases DYNC1LI2 1783 genome.wustl.edu 37 16 66761663 66761663 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006141.2 -1 validated p.R397W 1.000 123 0% 65 27.7% 19 31.5% probably_damaging(1) deleterious(0.02) deleterious(0.883) HMMPfam_DLIC CES2 8824 genome.wustl.edu 37 16 66974547 66974547 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003869.4 +1 reviewed p.G319 0.457 304 0.3% 292 30.5% 21 38% - - - HMMPfam_COesterase,superfamily_alpha/beta-Hydrolases PLEKHG4 25894 genome.wustl.edu 37 16 67319064 67319064 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001129727.1 +1 reviewed p.Q714R 0.002 14 0% 31 22.6% 0 - benign(0) tolerated(0.75) neutral(0.002) NULL CTCF 10664 genome.wustl.edu 37 16 67655479 67655479 + Nonsense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006565.2 +1 reviewed p.R448* 1.000 159 0% 113 14.2% 19 5.2% - - - HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers GFOD2 81577 genome.wustl.edu 37 16 67709421 67709421 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_030819.3 -1 validated p.A265 0.945 45 0% 63 34.9% 13 30.7% - - - superfamily_Glyceraldehyde-3-phosphate dehydrogenase-like C-terminal domain GFOD2 81577 genome.wustl.edu 37 16 67709903 67709903 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_030819.3 -1 validated p.R105W 1.000 115 0% 102 29.4% 9 22.2% probably_damaging(0.999) deleterious(0) deleterious(0.935) superfamily_NAD(P)-binding Rossmann-fold domains TSNAXIP1 55815 genome.wustl.edu 37 16 67855110 67855110 + Missense_Mutation SNP C C A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000415766 +1 known p.P86T 0.018 38 0% 33 15.2% 0 - benign(0) - - NULL ST3GAL2 6483 genome.wustl.edu 37 16 70432418 70432418 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006927.3 -1 reviewed p.R6W 1.000 82 0% 57 26.3% 8 25% probably_damaging(1) deleterious(0) deleterious(0.945) NULL VAC14 55697 genome.wustl.edu 37 16 70815792 70815792 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018052.3 -1 validated p.A309V 1.000 76 0% 47 27.7% 18 61.1% benign(0.141) deleterious(0.03) neutral(0.377) superfamily_ARM-type_fold DHODH 1723 genome.wustl.edu 37 16 72057410 72057410 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001361.3 +1 reviewed p.S337 0.697 112 0% 124 20.2% 9 11.1% - - - PatternScan_DHODEHASE_2,HMMPfam_DHO_dh,superfamily_SSF51395 ZFHX3 463 genome.wustl.edu 37 16 72991509 72991509 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006885.3 -1 reviewed p.R846C 1.000 347 0% 336 18.8% 1 0% unknown(0) - - NULL HSDL1 83693 genome.wustl.edu 37 16 84163994 84163994 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_031463.4 -1 validated p.A88V 1.000 144 0% 128 29.7% 6 33.3% probably_damaging(1) tolerated(0.14) deleterious(0.750) HMMPfam_adh_short,superfamily_NAD(P)-binding Rossmann-fold domains ATP2C2 9914 genome.wustl.edu 37 16 84492939 84492939 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014861.2 +1 validated p.N760 0.659 126 0% 131 22.1% 20 45% - - - HMMPfam_Cation_ATPase_C,superfamily_Calcium ATPase transmembrane domain M SPG7 6687 genome.wustl.edu 37 16 89619531 89619531 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003119.2 +1 reviewed p.E642K 1.000 67 0% 72 23.6% 32 28.1% benign(0) tolerated(0.66) neutral(0.003) HMMPfam_Peptidase_M41,superfamily_P-loop containing nucleoside triphosphate hydrolases SGSM2 9905 genome.wustl.edu 37 17 2270646 2270646 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014853.2 +1 validated p.A457V 1.000 89 0% 110 12.7% 1 0% possibly_damaging(0.647) tolerated(0.16) neutral(0.286) NULL TRPV3 162514 genome.wustl.edu 37 17 3417914 3417914 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_145068.2 -1 reviewed p.E751K 1.000 258 0% 123 14.6% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL C17orf85 55421 genome.wustl.edu 37 17 3716500 3716500 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001114118.1 -1 provisional p.A567 0.000 369 0% 267 25.1% 15 80% - - - NULL CYB5D2 124936 genome.wustl.edu 37 17 4053193 4053193 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_144611.3 +1 validated p.A87T 1.000 190 0% 146 18.5% 25 12% probably_damaging(0.997) deleterious(0) deleterious(0.911) HMMPfam_Cyt-b5,superfamily_Cyt_B5 MYBBP1A 10514 genome.wustl.edu 37 17 4442924 4442924 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001105538.1 -1 validated p.P1258L 0.006 98 0% 219 23.3% 25 28% benign(0) tolerated(1) - NULL ARRB2 409 genome.wustl.edu 37 17 4623511 4623511 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004313.3 +1 reviewed p.I306 0.125 323 0% 339 23.3% 46 19.5% - - - HMMPfam_Arrestin_C,superfamily_E set domains PLD2 5338 genome.wustl.edu 37 17 4721315 4721315 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002663.3 +1 validated p.R612C 1.000 153 0% 132 22% 8 25% probably_damaging(0.999) tolerated(0.05) deleterious(0.836) superfamily_Phospholipase D/nuclease MINK1 50488 genome.wustl.edu 37 17 4790901 4790901 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_153827.4 +1 reviewed p.S349L 1.000 29 0% 44 31.8% 31 29% probably_damaging(0.959) tolerated(0.07) deleterious(0.722) NULL BCL6B 255877 genome.wustl.edu 37 17 6930059 6930059 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_181844.3 +1 validated p.R364C 1.000 99 0% 140 32.9% 2 0% probably_damaging(0.999) deleterious(0.04) deleterious(0.839) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers SHBG 6462 genome.wustl.edu 37 17 7534638 7534638 + Missense_Mutation SNP C C A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001040.3 +1 reviewed p.L172I 0.000 66 0% 80 20% 0 - benign(0.11) tolerated(0.36) neutral(0.029) HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_1 EFNB3 1949 genome.wustl.edu 37 17 7611412 7611412 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001406.3 +1 reviewed p.A87T 1.000 20 0% 54 31.5% 0 - benign(0.088) tolerated(0.08) neutral(0.306) HMMPfam_Ephrin,superfamily_Cupredoxins DNAH2 146754 genome.wustl.edu 37 17 7720031 7720031 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020877.2 +1 validated p.A3291V 1.000 226 0% 207 29.5% 1 100% benign(0) tolerated(0.3) neutral(0.029) NULL CHD3 1107 genome.wustl.edu 37 17 7811274 7811274 + Nonsense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001005271.2 +1 reviewed p.R1756* 1.000 140 0% 156 25.6% 42 14.2% - - - NULL ALOX15B 247 genome.wustl.edu 37 17 7948299 7948299 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001141.2 +1 reviewed p.S277G 0.707 297 0% 212 26.9% 0 - possibly_damaging(0.892) deleterious(0.05) deleterious(0.697) HMMPfam_Lipoxygenase,superfamily_Lipoxigenase AURKB 9212 genome.wustl.edu 37 17 8111127 8111127 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004217.2 -1 validated p.R27Q 1.000 307 0% 327 24.2% 7 14.2% probably_damaging(1) tolerated(0.17) deleterious(0.559) NULL RCVRN 5957 genome.wustl.edu 37 17 9808264 9808264 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002903.2 -1 reviewed p.D78 0.992 300 0% 244 29.1% 0 - - - - HMMSmart_SM00054,superfamily_EF-hand MYH13 8735 genome.wustl.edu 37 17 10265487 10265487 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003802.2 -1 validated p.A151 1.000 345 0% 155 30.3% 0 - - - - HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases MYH3 4621 genome.wustl.edu 37 17 10550730 10550730 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002470.2 -1 reviewed p.R250Q 1.000 108 0% 95 30.5% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540 DNAH9 1770 genome.wustl.edu 37 17 11554417 11554417 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001372.3 +1 reviewed p.L710P 0.997 208 0.5% 115 21.7% 0 - benign(0.076) deleterious(0) neutral(0.450) HMMPfam_DHC_N1 ELAC2 60528 genome.wustl.edu 37 17 12908384 12908384 + Missense_Mutation SNP G G T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018127.6 -1 reviewed p.P302H 1.000 230 0% 216 27.8% 29 48.2% probably_damaging(1) deleterious(0) deleterious(0.945) NULL MPRIP 23164 genome.wustl.edu 37 17 17069173 17069173 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000414263 +1 known p.R102W 1.000 12 0% 27 22.2% 1 0% possibly_damaging(0.67) tolerated(0.31) neutral(0.265) NULL MYO15A 51168 genome.wustl.edu 37 17 18039938 18039938 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_016239.3 +1 reviewed p.A1573T 0.964 110 0% 96 24% 0 - benign(0.066) - - HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases MYO15A 51168 genome.wustl.edu 37 17 18045510 18045510 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_016239.3 +1 reviewed p.R1923C 1.000 110 0% 83 20.5% 0 - possibly_damaging(0.612) - - HMMSmart_SM00015,superfamily_P-loop containing nucleoside triphosphate hydrolases LLGL1 3996 genome.wustl.edu 37 17 18145007 18145007 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004140.3 +1 reviewed p.C915 0.452 57 0% 107 28% 22 45.4% - - - NULL SMCR7 125170 genome.wustl.edu 37 17 18167892 18167892 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_148886.1 +1 reviewed p.T404 0.390 83 0% 71 19.7% 7 28.5% - - - NULL FBXW10 10517 genome.wustl.edu 37 17 18659377 18659377 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_031456.3 +1 validated p.T381I 0.999 444 0% 243 19.8% 0 - possibly_damaging(0.625) deleterious(0.04) deleterious(0.567) superfamily_WD40 repeat-like,superfamily_F-box domain SLC47A2 146802 genome.wustl.edu 37 17 19611657 19611657 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_152908.3 -1 validated p.V232A 0.113 178 0% 157 24.8% 0 - benign(0) tolerated(0.44) neutral(0.013) NULL PIPOX 51268 genome.wustl.edu 37 17 27380109 27380109 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_016518.2 +1 validated p.S145 0.000 73 0% 61 23% 0 - - - - HMMPfam_DAO,superfamily_FAD/NAD(P)-binding domain ATAD5 79915 genome.wustl.edu 37 17 29214372 29214372 + Nonsense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024857.3 +1 provisional p.R1414* 1.000 140 0% 77 27.3% 1 0% - - - superfamily_P-loop containing nucleoside triphosphate hydrolases ADAP2 55803 genome.wustl.edu 37 17 29283270 29283270 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018404.2 +1 validated p.E298 1.000 90 0% 71 31% 8 0% - - - HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like RHOT1 55288 genome.wustl.edu 37 17 30551667 30551667 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001033568.1 +1 validated p.T664M 1.000 260 0% 85 29.4% 20 25% possibly_damaging(0.824) deleterious(0.01) deleterious(0.718) NULL MYO1D 4642 genome.wustl.edu 37 17 31099856 31099856 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015194.1 -1 provisional p.R190Q 1.000 177 0% 96 30.2% 7 42.8% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases TMEM98 26022 genome.wustl.edu 37 17 31266506 31266506 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001033504.1 +1 validated p.V142A 1.000 293 0% 166 22.9% 40 40% probably_damaging(0.996) deleterious(0.01) deleterious(0.867) NULL ASIC2 40 genome.wustl.edu 37 17 31355357 31355357 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_183377.1 -1 reviewed p.L347 0.996 103 0% 71 32.4% 2 50% - - - HMMPfam_ASC MMP28 79148 genome.wustl.edu 37 17 34097216 34097216 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024302.3 -1 reviewed p.T240M 1.000 20 0% 15 46.7% 2 0% - - - NULL GGNBP2 79893 genome.wustl.edu 37 17 34934444 34934444 + Nonsense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024835.2 +1 validated p.R225* 1.000 102 0% 139 27.3% 17 5.8% - - - NULL SRCIN1 80725 genome.wustl.edu 37 17 36689599 36689599 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_025248.2 -1 validated p.S1162L 0.996 105 0% 113 28.3% 0 - benign(0.038) deleterious(0) neutral(0.447) NULL SRCIN1 80725 genome.wustl.edu 37 17 36719065 36719065 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_025248.2 -1 validated p.R278W 1.000 132 0% 184 22.3% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) NULL MLLT6 4302 genome.wustl.edu 37 17 36865441 36865441 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005937.3 +1 validated p.E124K 1.000 73 0% 98 31.6% 9 44.4% benign(0.194) tolerated(1) neutral(0.018) HMMSmart_PHD PSMD3 5709 genome.wustl.edu 37 17 38145006 38145006 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002809.2 +1 reviewed p.A207V 0.992 221 0% 187 23% 72 33.3% benign(0) deleterious(0.02) neutral(0.383) superfamily_TPR-like CCR7 1236 genome.wustl.edu 37 17 38711511 38711511 + Missense_Mutation SNP G G A rs141181444 by1000genomes TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001838.2 -1 reviewed p.A207V 0.001 147 0.7% 121 32.2% 0 - benign(0) tolerated(0.53) neutral(0.007) HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like KRT32 3882 genome.wustl.edu 37 17 39616408 39616408 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002278.3 -1 reviewed p.R434H 0.100 84 0% 44 20.5% 0 - benign(0.001) tolerated(0.61) neutral(0.004) NULL KRT35 3886 genome.wustl.edu 37 17 39637346 39637346 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002280.4 -1 reviewed p.A2T 1.000 33 0% 37 21.6% 0 - benign(0.059) tolerated(0.3) neutral(0.033) NULL KAT2A 2648 genome.wustl.edu 37 17 40267764 40267764 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_021078.2 -1 validated p.A618T 1.000 338 0.9% 441 26.8% 25 24% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Acetyltransf_1,superfamily_Acyl-CoA N-acyltransferases (Nat) MLX 6945 genome.wustl.edu 37 17 40722073 40722073 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_170607.2 +1 reviewed p.K238E 1.000 218 0% 245 20.4% 40 20% probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_Bet v1-like PLEKHH3 79990 genome.wustl.edu 37 17 40825745 40825745 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024927.4 -1 validated p.G136R 1.000 6 0.000 11 0.364 13 15.3% possibly_damaging(0.923) tolerated(0.05) deleterious(0.718) HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like WNK4 65266 genome.wustl.edu 37 17 40933061 40933061 + Silent SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_032387.4 +1 reviewed p.P115 0.000 17 0% 38 34.2% 0 - - - - NULL WNK4 65266 genome.wustl.edu 37 17 40936141 40936141 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_032387.4 +1 reviewed p.T326 0.664 188 0% 238 21.4% 0 - - - - HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase WNK4 65266 genome.wustl.edu 37 17 40937379 40937379 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_032387.4 +1 reviewed p.G452D 0.990 31 0% 75 24% 0 - possibly_damaging(0.624) tolerated(0.09) deleterious(0.514) superfamily_Protein kinase-like (PK-like) SOST 50964 genome.wustl.edu 37 17 41835933 41835933 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_025237.2 -1 reviewed p.A59 0.997 122 0% 141 19.1% 0 - - - - HMMPfam_Sclerostin DUSP3 1845 genome.wustl.edu 37 17 41847062 41847062 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004090.3 -1 reviewed p.R158H 1.000 159 0% 115 22.6% 39 38.4% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_DSPc,HMMSmart_SM00195,superfamily_(Phosphotyrosine protein) phosphatases II CD300LG 146894 genome.wustl.edu 37 17 41934519 41934519 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_145273.3 +1 validated p.R294C 0.000 207 0.5% 120 24.2% 0 - probably_damaging(0.968) deleterious(0.01) deleterious(0.816) NULL C17orf104 284071 genome.wustl.edu 37 17 42744000 42744000 + Nonsense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001145080.2 +1 validated p.R241* 0.984 141 0% 124 21.8% 0 - - - - NULL FMNL1 752 genome.wustl.edu 37 17 43323899 43323899 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005892.3 +1 reviewed p.R1080H 1.000 113 0% 197 25.4% 1 0% unknown(0) tolerated(0.05) - NULL MAP3K14 9020 genome.wustl.edu 37 17 43344487 43344487 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000344686 -1 known p.S801N 1.000 74 0% 89 25.8% 12 16.6% possibly_damaging(0.839) deleterious(0) deleterious(0.765) NULL ARHGAP27 201176 genome.wustl.edu 37 17 43481688 43481688 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_199282.2 -1 validated p.L135 0.000 74 0% 131 27.5% 3 0% - - - NULL ARHGAP27 201176 genome.wustl.edu 37 17 43483043 43483043 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_199282.2 -1 validated p.R14Q 0.899 19 0% 38 18.4% 11 27.2% probably_damaging(0.999) tolerated(0.33) deleterious(0.514) NULL LRRC37A2 474170 genome.wustl.edu 37 17 44626102 44626102 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001006607.2 +1 validated p.N1199 0.001 49 0% 47 38.3% 8 0% - - - NULL C17orf57 124989 genome.wustl.edu 37 17 45490179 45490179 + Silent SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_152347.3 +1 provisional p.N773 0.997 220 0% 177 16.4% 0 - - - - superfamily_EF-hand NPEPPS 9520 genome.wustl.edu 37 17 45656879 45656879 + Splice_Site SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006310.3 +1 reviewed e4+2 1.000 82 0% 39 10.3% 0 - - - - - SPOP 8405 genome.wustl.edu 37 17 47696430 47696430 + Missense_Mutation SNP C C A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001007226.1 -1 reviewed p.W131C 1.000 136 0% 72 13.9% 22 31.8% probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMPfam_MATH,HMMSmart_SM00061,superfamily_TRAF domain-like SKA2 348235 genome.wustl.edu 37 17 57189674 57189674 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_182620.3 -1 validated p.A110 0.726 102 0% 195 23.1% 34 20.5% - - - NULL MRC2 9902 genome.wustl.edu 37 17 60768091 60768091 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006039.3 +1 validated p.G1327 0.133 135 0% 223 27.8% 14 7.1% - - - HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like CSH2 1443 genome.wustl.edu 37 17 61950690 61950690 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020991.3 -1 reviewed p.T7M 0.000 154 0% 138 13.8% 0 - benign(0.022) tolerated(0.27) neutral(0.035) NULL GH2 2689 genome.wustl.edu 37 17 61957709 61957709 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_022558.2 -1 reviewed p.A208T 1.000 401 0.2% 337 18.1% 0 - benign(0.145) deleterious(0) neutral(0.457) NULL FAM20A 54757 genome.wustl.edu 37 17 66533712 66533712 + Missense_Mutation SNP C C A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_017565.3 -1 validated p.G511V 0.000 247 0% 72 11.1% 72 4.1% benign(0.014) tolerated(0.07) neutral(0.320) HMMPfam_DUF1193 MAP2K6 5608 genome.wustl.edu 37 17 67515455 67515455 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002758.3 +1 reviewed p.R83Q 1.000 221 0% 85 24.7% 84 17.8% probably_damaging(0.962) tolerated(0.34) neutral(0.428) HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase SOX9 6662 genome.wustl.edu 37 17 70120418 70120418 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000346.3 +1 reviewed p.R474C 1.000 189 0% 250 25.6% 51 52.9% probably_damaging(1) deleterious(0) deleterious(0.945) NULL SDK2 54549 genome.wustl.edu 37 17 71434256 71434256 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001144952.1 -1 provisional p.G255R 1.000 58 0% 75 20% 2 0% probably_damaging(0.981) deleterious(0) deleterious(0.870) HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin TTYH2 94015 genome.wustl.edu 37 17 72249359 72249359 + Nonsense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_032646.5 +1 reviewed p.Q467* 1.000 86 0% 90 26.7% 1 0% - - - NULL SLC9A3R1 9368 genome.wustl.edu 37 17 72764798 72764798 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000413388 +1 known p.A248T 0.000 39 0% 92 38% 255 58% unknown(0) deleterious(0) - NULL NUP85 79902 genome.wustl.edu 37 17 73229176 73229176 + Missense_Mutation SNP G G A rs149330582 by1000genomes TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024844.3 +1 reviewed p.R513Q 0.829 254 0% 213 28.2% 35 31.4% benign(0.074) tolerated(0.47) neutral(0.016) HMMPfam_Nucleopor_Nup85 CASKIN2 57513 genome.wustl.edu 37 17 73501022 73501022 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020753.3 -1 validated p.R355C 0.997 20 0% 33 36.4% 14 71.4% probably_damaging(0.977) deleterious(0) deleterious(0.863) superfamily_SH3-domain,superfamily_Ankyrin repeat EVPL 2125 genome.wustl.edu 37 17 74005048 74005048 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001988.2 -1 validated p.R1413Q 0.282 69 0% 78 26.9% 7 28.5% possibly_damaging(0.624) tolerated(0.38) neutral(0.235) NULL UBE2O 63893 genome.wustl.edu 37 17 74395609 74395609 + Missense_Mutation SNP G G T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_022066.3 -1 validated p.P517T 1.000 396 0% 477 27% 14 14.2% probably_damaging(0.998) tolerated(0.15) deleterious(0.716) NULL RHBDF2 79651 genome.wustl.edu 37 17 74475072 74475072 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024599.3 -1 validated p.R192Q 1.000 60 0% 58 41.4% 16 37.5% probably_damaging(1) deleterious(0) deleterious(0.945) NULL SEPT9 10801 genome.wustl.edu 37 17 75483612 75483612 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001113491.1 +1 reviewed p.I340 0.018 113 0% 174 27% 199 34.6% - - - HMMPfam_Septin,superfamily_P-loop containing nucleoside triphosphate hydrolases TMC8 147138 genome.wustl.edu 37 17 76129939 76129939 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_152468.4 +1 reviewed p.V225A 1.000 30 0% 52 26.9% 2 0% benign(0.006) tolerated(1) - NULL CBX4 8535 genome.wustl.edu 37 17 77808756 77808756 + Missense_Mutation SNP G G T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003655.2 -1 validated p.P229T 0.987 57 0% 171 24% 10 40% benign(0.138) tolerated(0.11) neutral(0.283) NULL CCDC40 55036 genome.wustl.edu 37 17 78069191 78069191 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_017950.2 +1 validated p.R988C 0.378 72 0% 95 18.9% 1 100% probably_damaging(0.999) deleterious(0.01) deleterious(0.896) NULL ENDOV 284131 genome.wustl.edu 37 17 78395752 78395752 + Missense_Mutation SNP T T G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_173627.3 +1 validated p.L118R 0.378 94 0% 120 23.3% 1 0% probably_damaging(0.981) deleterious(0.02) deleterious(0.808) HMMPfam_Endonuclease_5 CHMP6 79643 genome.wustl.edu 37 17 78970847 78970847 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024591.4 +1 validated p.T130M 1.000 93 0% 134 22.4% 12 50% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Snf7 P4HB 5034 genome.wustl.edu 37 17 79817123 79817123 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000918.3 -1 reviewed p.V96M 0.995 179 0% 216 24.5% 476 42.2% probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_Thioredoxin-like,HMMPfam_Thioredoxin PYCR1 5831 genome.wustl.edu 37 17 79893243 79893243 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006907.2 -1 reviewed p.A96 0.516 85 0% 141 31.2% 29 31% - - - HMMPfam_F420_oxidored,superfamily_NAD(P)-binding Rossmann-fold domains LRRC45 201255 genome.wustl.edu 37 17 79985552 79985552 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_144999.2 +1 provisional p.A279V 0.046 56 0% 53 26.4% 20 35% benign(0.001) tolerated(1) - NULL RAC3 5881 genome.wustl.edu 37 17 79991387 79991387 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005052.2 +1 reviewed p.R120 0.906 88 0% 208 26% 18 44.4% - - - HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases GPS1 2873 genome.wustl.edu 37 17 80011212 80011212 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_212492.1 +1 reviewed p.D72 0.962 117 0% 136 28.7% 73 43.8% - - - NULL FASN 2194 genome.wustl.edu 37 17 80041976 80041976 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004104.4 -1 reviewed p.A1658V 0.686 38 0% 45 20% 11 9% possibly_damaging(0.487) deleterious(0) deleterious(0.607) superfamily_GroES-like,superfamily_NAD(P)-binding Rossmann-fold domains HEXDC 284004 genome.wustl.edu 37 17 80393626 80393626 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_173620.2 +1 validated p.T170M 0.000 36 0% 51 21.6% 10 20% possibly_damaging(0.513) deleterious(0.04) deleterious(0.521) HMMPfam_Glyco_hydro_20,superfamily_Glyco_hydro_cat NARF 26502 genome.wustl.edu 37 17 80430520 80430520 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_012336.3 +1 reviewed p.R156C 0.870 182 0% 132 27.3% 30 33.3% probably_damaging(0.976) deleterious(0.05) deleterious(0.763) HMMPfam_Fe_hyd_lg_C,superfamily_Fe-only hydrogenase ENSG00000173213 0 genome.wustl.edu 37 18 47803 47803 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000308911 -1 known p.G308S 1.000 37 0% 58 27.6% 0 - probably_damaging(0.988) deleterious(0) deleterious(0.882) superfamily_Tub_FtsZ_C,HMMPfam_Tubulin_C NDC80 10403 genome.wustl.edu 37 18 2610840 2610840 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006101.2 +1 validated p.T591A 0.999 141 0% 30 16.7% 6 33.3% benign(0.093) tolerated(0.46) neutral(0.019) NULL IMPA2 3613 genome.wustl.edu 37 18 12012198 12012198 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014214.1 +1 validated p.F122S 1.000 176 0% 220 31.4% 18 50% probably_damaging(0.998) deleterious(0) deleterious(0.919) HMMPfam_Inositol_P,superfamily_Carbohydrate phosphatase CEP192 55125 genome.wustl.edu 37 18 13049261 13049261 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_032142.3 +1 validated p.P228L 0.000 201 0% 137 16.1% 3 66.6% benign(0) tolerated(1) - NULL GREB1L 80000 genome.wustl.edu 37 18 19088425 19088425 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001142966.1 +1 provisional p.H1536 0.998 93 0% 61 16.4% 0 - - - - NULL TCEB3B 51224 genome.wustl.edu 37 18 44560088 44560088 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_016427.2 -1 reviewed p.S516 0.009 62 0% 115 26.1% 0 - - - - NULL C18orf32 497661 genome.wustl.edu 37 18 47010019 47010019 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001035005.2 -1 predicted p.R34C 0.610 322 0% 346 24.9% 45 33.3% probably_damaging(0.968) deleterious(0) deleterious(0.855) NULL NEDD4L 23327 genome.wustl.edu 37 18 56057899 56057899 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001144967.1 +1 validated p.E893K 1.000 300 0% 194 28.4% 28 67.8% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain PHLPP1 23239 genome.wustl.edu 37 18 60497369 60497369 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_194449.2 +1 validated p.R48C 1.000 246 0% 89 23.6% 2 50% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_PH SOCS6 9306 genome.wustl.edu 37 18 67993303 67993303 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004232.3 +1 reviewed p.N467D 1.000 243 0% 137 31.4% 20 30% benign(0.008) deleterious(0.04) neutral(0.349) HMMSmart_SH2,superfamily_SSF55550 MBP 4155 genome.wustl.edu 37 18 74778284 74778284 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001025101.1 -1 reviewed p.R37W 0.001 236 0% 277 19.9% 13 30.7% possibly_damaging(0.938) deleterious(0.03) deleterious(0.748) NULL ATP9B 374868 genome.wustl.edu 37 18 77133986 77133986 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_198531.3 +1 validated p.T1053 0.019 277 0% 298 23.2% 31 54.8% - - - NULL CTDP1 9150 genome.wustl.edu 37 18 77477922 77477922 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004715.3 +1 reviewed p.D775N 0.990 34 0% 48 29.2% 12 41.6% probably_damaging(1) tolerated(0.17) deleterious(0.559) HMMPfam_FCP1_C THEG 51298 genome.wustl.edu 37 19 362276 362276 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_016585.3 -1 reviewed p.R355H 0.036 366 0% 461 31% 0 - benign(0.013) tolerated(0.59) neutral(0.005) NULL RNF126 55658 genome.wustl.edu 37 19 651753 651753 + Missense_Mutation SNP G G T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_194460.2 -1 reviewed p.Q101K 0.006 17 0% 26 19.2% 28 25% benign(0.27) tolerated(0.17) neutral(0.088) NULL ABCA7 10347 genome.wustl.edu 37 19 1058741 1058741 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_019112.3 +1 reviewed p.L1758 0.522 164 0% 258 26.4% 31 54.8% - - - NULL REXO1 57455 genome.wustl.edu 37 19 1827392 1827392 + Nonsense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020695.3 -1 validated p.R466* 0.000 5 0.000 7 0.571 0 - - - - NULL DIRAS1 148252 genome.wustl.edu 37 19 2717296 2717296 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_145173.3 -1 validated p.R170H 0.991 70 0% 91 20.9% 0 - benign(0.003) deleterious(0) neutral(0.445) HMMSmart_RAS,HMMPfam_Ras,superfamily_SSF52540 THOP1 7064 genome.wustl.edu 37 19 2807528 2807528 + Silent SNP C C G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003249.3 +1 provisional p.G325 0.149 46 2.2% 49 26.5% 6 50% - - - HMMPfam_Peptidase_M3,superfamily_SSF55486 PIP5K1C 23396 genome.wustl.edu 37 19 3664847 3664847 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_012398.1 -1 reviewed p.D64 1.000 58 0% 80 22.5% 10 60% - - - NULL MATK 4145 genome.wustl.edu 37 19 3778305 3778305 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002378.3 -1 reviewed p.R468H 0.032 17 0% 22 27.3% 0 - probably_damaging(0.977) deleterious(0.02) deleterious(0.802) HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like ZFR2 23217 genome.wustl.edu 37 19 3827605 3827605 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015174.1 -1 validated p.A300V 1.000 54 0% 80 23.7% 0 - possibly_damaging(0.559) deleterious(0.01) deleterious(0.596) HMMSmart_SM00451 CHAF1A 10036 genome.wustl.edu 37 19 4432096 4432096 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005483.2 +1 validated p.D699N 0.000 38 0% 42 16.7% 15 20% possibly_damaging(0.919) tolerated(0.35) neutral(0.390) NULL KDM4B 23030 genome.wustl.edu 37 19 5131295 5131295 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015015.2 +1 validated p.V508 0.088 17 0% 28 21.4% 13 30.7% - - - NULL SAFB2 9667 genome.wustl.edu 37 19 5590311 5590311 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014649.2 -1 validated p.R835W 0.825 19 0% 28 28.6% 24 33.3% unknown(0) deleterious(0) - NULL ACER1 125981 genome.wustl.edu 37 19 6306880 6306880 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_133492.2 -1 validated p.S214G 1.000 79 0% 44 29.5% 0 - benign(0.138) tolerated(0.44) neutral(0.024) HMMPfam_aPHC CLPP 8192 genome.wustl.edu 37 19 6362538 6362538 + Missense_Mutation SNP T T A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006012.2 +1 reviewed p.Y118N 1.000 208 0% 293 18.1% 127 22% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_CLP_protease,superfamily_SSF52096 PNPLA6 10908 genome.wustl.edu 37 19 7620597 7620597 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006702.4 +1 reviewed p.A976V 0.998 37 0% 58 20.7% 11 0% probably_damaging(0.986) deleterious(0.03) deleterious(0.799) HMMPfam_Patatin,superfamily_Acyl_Trfase/lysoPlipase EVI5L 115704 genome.wustl.edu 37 19 7912617 7912617 + Splice_Site SNP G G T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_145245.3 +1 validated e2-1 1.000 60 0% 62 19.4% 0 - - - - - EVI5L 115704 genome.wustl.edu 37 19 7914023 7914023 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_145245.3 +1 validated p.V182I 0.999 63 0% 91 28.6% 12 75% benign(0.071) tolerated(0.33) neutral(0.029) HMMPfam_TBC,HMMSmart_TBC,superfamily_RabGAP_TBC MAP2K7 5609 genome.wustl.edu 37 19 7976406 7976406 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_145185.2 +1 reviewed p.P341L 1.000 46 0% 73 23.3% 18 11.1% probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase MAP2K7 5609 genome.wustl.edu 37 19 7976417 7976417 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_145185.2 +1 reviewed p.G345R 0.545 42 0% 66 10.6% 17 29.4% benign(0.004) tolerated(0.45) neutral(0.012) HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase MYO1F 4542 genome.wustl.edu 37 19 8615058 8615058 + Missense_Mutation SNP C C T rs139211736 by1000genomes TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_012335.3 -1 validated p.D363N 1.000 52 0% 44 31.8% 8 0% probably_damaging(0.976) tolerated(0.13) deleterious(0.670) HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases PPAN 56342 genome.wustl.edu 37 19 10224481 10224481 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000428358 +1 known p.P505L 0.256 54 0% 109 22.9% 7 0% unknown(0) - - NULL P2RY11 5032 genome.wustl.edu 37 19 10225220 10225220 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002566.4 +1 reviewed p.P311S 0.961 41 0% 47 27.7% 19 42.1% probably_damaging(0.998) tolerated(0.62) deleterious(0.478) HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like P2RY11 5032 genome.wustl.edu 37 19 10225327 10225327 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002566.4 +1 reviewed p.D346 0.001 58 0% 89 19.1% 17 5.8% - - - NULL RAVER1 125950 genome.wustl.edu 37 19 10439571 10439571 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_133452.2 -1 validated p.R185H 0.996 45 0% 32 40.6% 25 52% possibly_damaging(0.91) tolerated(0.09) deleterious(0.659) HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD AP1M2 10053 genome.wustl.edu 37 19 10690406 10690406 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005498.4 -1 reviewed p.R268C 1.000 165 0% 150 28.7% 101 34.6% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Adap_comp_sub,superfamily_Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor HOOK2 29911 genome.wustl.edu 37 19 12878234 12878234 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_013312.2 -1 validated p.A450T 1.000 60 0% 122 20.5% 23 26% possibly_damaging(0.694) tolerated(0.27) neutral(0.282) HMMPfam_HOOK MAST1 22983 genome.wustl.edu 37 19 12984173 12984173 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014975.2 +1 validated p.K1100R 1.000 46 0% 67 20.9% 0 - benign(0.018) tolerated(0.17) neutral(0.059) NULL NACC1 112939 genome.wustl.edu 37 19 13246664 13246664 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_052876.2 +1 validated p.R215W 0.967 23 0% 48 29.2% 13 46.1% probably_damaging(0.994) deleterious(0) deleterious(0.897) NULL CCDC130 81576 genome.wustl.edu 37 19 13873536 13873536 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_030818.2 +1 provisional p.A282V 0.000 13 0% 21 33.3% 37 43.2% benign(0.001) tolerated(0.11) neutral(0.272) HMMPfam_DUF572 IL27RA 9466 genome.wustl.edu 37 19 14153273 14153273 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004843.2 +1 reviewed p.P181 0.000 88 0% 113 24.8% 5 20% - - - HMMSmart_SM00060,superfamily_Fibronectin type III CD97 976 genome.wustl.edu 37 19 14515214 14515214 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_078481.2 +1 reviewed p.R490Q 0.000 52 0% 66 22.7% 54 22.2% probably_damaging(1) deleterious(0.01) deleterious(0.905) NULL GIPC1 10755 genome.wustl.edu 37 19 14591296 14591296 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005716.2 -1 validated p.R159H 1.000 116 0% 130 24.6% 290 50.6% possibly_damaging(0.85) deleterious(0.01) deleterious(0.733) HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ OR7C1 26664 genome.wustl.edu 37 19 14910584 14910584 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_198944.1 -1 validated p.R122H 0.476 274 0% 181 24.9% 0 - probably_damaging(0.97) deleterious(0.02) deleterious(0.795) HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321 NOTCH3 4854 genome.wustl.edu 37 19 15276250 15276250 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000435.2 -1 reviewed p.R1915H 1.000 170 0% 171 28.1% 33 18.1% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat NOTCH3 4854 genome.wustl.edu 37 19 15291547 15291547 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000435.2 -1 reviewed p.S1029 0.141 54 0% 69 29% 16 25% - - - HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_EGF/Laminin NWD1 284434 genome.wustl.edu 37 19 16902313 16902313 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001007525.2 +1 validated p.T896 0.012 166 0% 102 22.5% 1 0% - - - superfamily_WD40 repeat-like GLT25D1 79709 genome.wustl.edu 37 19 17691561 17691561 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024656.2 +1 provisional p.R483H 0.330 79 0% 105 21% 39 15.3% benign(0.001) tolerated(0.06) neutral(0.323) HMMPfam_Glyco_transf_25 GLT25D1 79709 genome.wustl.edu 37 19 17691628 17691628 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024656.2 +1 provisional p.G505 0.967 101 0% 130 26.9% 42 21.4% - - - HMMPfam_Glyco_transf_25 MAST3 23031 genome.wustl.edu 37 19 18258322 18258322 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015016.1 +1 validated p.S1094 0.457 65 0% 97 33% 2 50% - - - NULL RAB3A 5864 genome.wustl.edu 37 19 18309582 18309582 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002866.4 -1 validated p.E142G 1.000 232 0% 284 23.2% 6 16.6% possibly_damaging(0.695) deleterious(0) deleterious(0.694) HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases DDX49 54555 genome.wustl.edu 37 19 19033222 19033222 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_019070.4 +1 validated p.R179C 0.075 26 0% 26 34.6% 49 40.8% probably_damaging(0.994) deleterious(0.01) deleterious(0.858) HMMPfam_DEAD,HMMSmart_DEXDc,superfamily_SSF52540 LOC729991 729991 genome.wustl.edu 37 19 19291552 19291552 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001145784.1 -1 validated p.P115 0.195 31 0% 35 22.9% 4 25% - - - HMMPfam_NEP ZNF93 81931 genome.wustl.edu 37 19 20026140 20026140 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_031218.3 +1 validated p.H19Y 0.203 257 0% 210 23.3% 1 100% possibly_damaging(0.916) deleterious(0) deleterious(0.811) HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352) ZNF726 730087 genome.wustl.edu 37 19 24102858 24102858 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000322487 +1 known p.R67Q 0.001 81 0% 153 22.2% 2 50% possibly_damaging(0.818) tolerated(0.22) neutral(0.351) NULL GPI 2821 genome.wustl.edu 37 19 34857716 34857716 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000175.3 +1 reviewed p.R81Q 1.000 148 0% 199 22.6% 217 47.9% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_PGI,superfamily_SSF53697 ZNF599 148103 genome.wustl.edu 37 19 35250452 35250452 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001007248.2 -1 validated p.T418 0.986 160 0% 105 29.5% 0 - - - - superfamily_C2H2 and C2HC zinc fingers ZNF792 126375 genome.wustl.edu 37 19 35449334 35449334 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_175872.4 -1 validated p.E475 0.905 170 0% 242 23.6% 5 40% - - - superfamily_C2H2 and C2HC zinc fingers GAPDHS 26330 genome.wustl.edu 37 19 36029508 36029508 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014364.4 +1 reviewed p.H124 0.410 213 0% 233 31.8% 0 - - - - HMMPfam_Gp_dh_N,superfamily_NAD(P)-bd MLL4 9757 genome.wustl.edu 37 19 36210845 36210845 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014727.1 +1 reviewed p.R199Q 1.000 30 0% 62 37.1% 4 50% unknown(0) - - NULL MLL4 9757 genome.wustl.edu 37 19 36214082 36214082 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014727.1 +1 reviewed p.R970W 1.000 73 0% 92 27.2% 3 66.6% probably_damaging(0.997) - - HMMPfam_zf-CXXC MLL4 9757 genome.wustl.edu 37 19 36220169 36220169 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014727.1 +1 reviewed p.H1630R 1.000 154 0% 204 25.5% 8 12.5% possibly_damaging(0.484) - - NULL MLL4 9757 genome.wustl.edu 37 19 36229456 36229456 + Nonstop_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014727.1 +1 reviewed p.*2716R 1.000 76 0% 121 22.3% 29 20.6% - - - NULL ARHGAP33 115703 genome.wustl.edu 37 19 36277904 36277904 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_052948.3 +1 reviewed p.A683 0.886 28 0% 39 20.5% 2 50% - - - NULL NPHS1 4868 genome.wustl.edu 37 19 36339975 36339975 + Silent SNP G G T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004646.3 -1 reviewed p.T305 0.000 35 0% 38 21.1% 0 - - - - HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_C2-set_2,superfamily_Immunoglobulin NFKBID 84807 genome.wustl.edu 37 19 36381357 36381357 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_139239.1 -1 provisional p.A214 0.324 98 0% 89 23.6% 1 100% - - - HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat ZNF382 84911 genome.wustl.edu 37 19 37117179 37117179 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_032825.3 +1 validated p.R127H 0.137 36 0% 27 25.9% 0 - benign(0.001) tolerated(0.57) neutral(0.006) NULL YIF1B 90522 genome.wustl.edu 37 19 38799459 38799459 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001039672.2 -1 validated p.A171V 1.000 209 0% 279 18.6% 64 25% benign(0.097) deleterious(0.05) neutral(0.353) HMMPfam_YIF1 RYR1 6261 genome.wustl.edu 37 19 38993282 38993282 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000540.2 +1 reviewed p.H2584Y 1.000 52 0% 61 34.4% 0 - possibly_damaging(0.947) - - NULL ACTN4 81 genome.wustl.edu 37 19 39214611 39214611 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004924.3 +1 reviewed p.L529P 1.000 47 0% 73 28.8% 158 34.1% unknown(0) deleterious(0) - HMMPfam_Spectrin,superfamily_Spectrin DLL3 10683 genome.wustl.edu 37 19 39994863 39994863 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_016941.3 +1 reviewed p.G269R 0.187 95 0% 130 24.6% 1 0% benign(0.001) tolerated(0.66) neutral(0.003) NULL FCGBP 8857 genome.wustl.edu 37 19 40392424 40392424 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003890.2 -1 validated p.L2694 0.957 210 0% 278 13.3% 3 0% - - - HMMPfam_C8 ZNF780B 163131 genome.wustl.edu 37 19 40553282 40553282 + Missense_Mutation SNP C C A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001005851.2 -1 validated p.D78Y 0.043 341 0% 188 21.8% 1 0% probably_damaging(0.998) deleterious(0.01) deleterious(0.880) NULL CYP2B6 1555 genome.wustl.edu 37 19 41515236 41515236 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000767.4 +1 reviewed p.R253H 0.046 99 0% 50 26% 1 0% possibly_damaging(0.909) tolerated(0.1) deleterious(0.648) HMMPfam_p450,superfamily_Cytochrome_P450 CD79A 973 genome.wustl.edu 37 19 42383352 42383352 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001783.3 +1 reviewed p.R124 0.005 42 0% 52 26.9% 14 0% - - - HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin ARHGEF1 9138 genome.wustl.edu 37 19 42396847 42396847 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_199002.1 +1 reviewed p.R196W 0.061 33 0% 40 35% 15 6.6% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_RGS-like,superfamily_Regulat_G_prot_signal_superfam CIC 23152 genome.wustl.edu 37 19 42791797 42791797 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015125.3 +1 validated p.R228Q 1.000 88 0% 144 29.2% 13 38.4% possibly_damaging(0.772) deleterious(0) deleterious(0.732) HMMPfam_HMG_box,HMMSmart_HMG,superfamily_HMG-box TMEM145 284339 genome.wustl.edu 37 19 42818842 42818842 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_173633.2 +1 validated p.S117 0.992 170 0% 164 24.4% 0 - - - - NULL PSG9 5678 genome.wustl.edu 37 19 43762514 43762514 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002784.3 -1 validated p.P361 0.005 370 0.3% 282 25.5% 0 - - - - HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin ZNF428 126299 genome.wustl.edu 37 19 44112165 44112165 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_182498.3 -1 validated p.D57 0.978 11 0% 20 40% 100 43% - - - NULL IRGC 56269 genome.wustl.edu 37 19 44222860 44222860 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_019612.3 +1 validated p.T50 0.000 21 0% 26 30.8% 0 - - - - HMMPfam_IIGP,superfamily_SSF52540 ZNF155 7711 genome.wustl.edu 37 19 44500670 44500670 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003445.2 +1 validated p.T221A 0.000 364 0% 215 25.6% 3 66.6% benign(0.184) tolerated(0.27) neutral(0.051) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers GPR4 2828 genome.wustl.edu 37 19 46095038 46095038 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005282.2 -1 validated p.G29 0.996 36 0% 66 10.6% 5 0% - - - superfamily_SSF81321 EML2 24139 genome.wustl.edu 37 19 46124851 46124851 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_012155.1 -1 provisional p.G296S 0.996 54 0% 76 31.6% 20 25% benign(0.17) tolerated(1) neutral(0.015) HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40 PPP5C 5536 genome.wustl.edu 37 19 46891832 46891832 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006247.2 +1 provisional p.R400Q 1.000 122 0% 158 20.3% 71 36.6% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Metallophos,HMMSmart_SM00156,superfamily_Metallo-dependent phosphatases ARHGAP35 2909 genome.wustl.edu 37 19 47423517 47423517 + Nonsense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004491.4 +1 reviewed p.R529* 0.998 152 0% 81 21% 4 25% - - - HMMPfam_FF,HMMSmart_SM00441 ARHGAP35 2909 genome.wustl.edu 37 19 47424519 47424519 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004491.4 +1 reviewed p.R863C 1.000 336 0.3% 197 25.9% 4 75% probably_damaging(1) deleterious(0) deleterious(0.945) NULL ZC3H4 23211 genome.wustl.edu 37 19 47570667 47570667 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015168.1 -1 validated p.R953Q 0.537 25 0% 53 24.5% 10 50% probably_damaging(1) deleterious(0) deleterious(0.945) NULL ZC3H4 23211 genome.wustl.edu 37 19 47597319 47597319 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015168.1 -1 validated p.D134N 1.000 139 0% 124 30.6% 10 20% unknown(0) tolerated(0.12) - NULL KPTN 11133 genome.wustl.edu 37 19 47984087 47984087 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_007059.2 -1 validated p.E177K 0.997 81 0% 161 19.3% 13 7.6% benign(0.011) tolerated(0.79) neutral(0.002) NULL EHD2 30846 genome.wustl.edu 37 19 48229355 48229355 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014601.3 +1 reviewed p.L263 0.804 57 0% 80 22.5% 6 0% - - - NULL LIG1 3978 genome.wustl.edu 37 19 48636294 48636294 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000234.1 -1 reviewed p.R557H 1.000 204 0% 218 20.6% 21 9.5% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_DNA_ligase_A_M,superfamily_DNA ligase/mRNA capping enzyme catalytic domain LMTK3 114783 genome.wustl.edu 37 19 49004310 49004310 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001080434.1 -1 provisional p.R394H 1.000 33 0% 44 45.5% 3 66.6% probably_damaging(0.997) deleterious(0.01) deleterious(0.872) HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like) FUT1 2523 genome.wustl.edu 37 19 49254343 49254343 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000148.3 -1 reviewed p.A66T 0.000 65 0% 110 23.6% 1 0% benign(0) tolerated(0.93) - HMMPfam_Glyco_transf_11 BAX 581 genome.wustl.edu 37 19 49464798 49464798 + Missense_Mutation SNP C C A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_138761.3 +1 reviewed p.L162I 1.000 40 0% 50 28% 119 13.4% benign(0.02) tolerated(0.57) neutral(0.007) PatternScan_BH2,superfamily_Bcl-2 inhibitors of programmed cell death GYS1 2997 genome.wustl.edu 37 19 49472705 49472705 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002103.4 -1 reviewed p.R685Q 1.000 37 0% 34 23.5% 34 2.9% possibly_damaging(0.951) tolerated(0.19) neutral(0.444) NULL TEAD2 8463 genome.wustl.edu 37 19 49844625 49844625 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003598.1 -1 provisional p.E434K 1.000 130 0% 183 28.4% 83 38.5% possibly_damaging(0.906) deleterious(0.01) deleterious(0.765) HMMPfam_TEA RPL13A 23521 genome.wustl.edu 37 19 49994115 49994115 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_012423.2 +1 reviewed p.Y112 0.106 46 0% 68 25% 1555 38.5% - - - HMMPfam_Ribosomal_L13,superfamily_Ribosomal_L13 PRR12 57479 genome.wustl.edu 37 19 50123627 50123627 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020719.1 +1 validated p.R1839H 1.000 152 0% 166 19.3% 30 16.6% probably_damaging(0.998) deleterious(0.01) deleterious(0.880) NULL NUP62 23636 genome.wustl.edu 37 19 50411513 50411513 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_012346.3 -1 reviewed p.R518W 1.000 83 0% 107 23.4% 50 30% probably_damaging(1) deleterious(0) deleterious(0.945) NULL MYH14 79784 genome.wustl.edu 37 19 50771581 50771581 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001077186.1 +1 reviewed p.R964H 0.984 102 0% 136 19.9% 44 52.2% possibly_damaging(0.771) tolerated(0.15) deleterious(0.527) NULL SHANK1 50944 genome.wustl.edu 37 19 51165489 51165489 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_016148.2 -1 validated p.S2073 0.027 40 0% 68 29.4% 0 - - - - NULL SIGLEC6 946 genome.wustl.edu 37 19 52023366 52023366 + Silent SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001245.5 -1 validated p.T444 0.000 299 0% 149 21.5% 0 - - - - NULL ZNF175 7728 genome.wustl.edu 37 19 52084665 52084665 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_007147.2 +1 validated p.V32M 0.918 390 0% 209 24.9% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352) ZNF610 162963 genome.wustl.edu 37 19 52869650 52869650 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_173530.2 +1 validated p.A340V 0.999 170 0% 215 30.7% 8 0% possibly_damaging(0.849) deleterious(0) deleterious(0.770) superfamily_C2H2 and C2HC zinc fingers CNOT3 4849 genome.wustl.edu 37 19 54656051 54656051 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014516.2 +1 validated p.L565P 1.000 63 0% 99 23.2% 52 40.3% probably_damaging(0.996) deleterious(0.04) deleterious(0.810) NULL NLRP7 199713 genome.wustl.edu 37 19 55450501 55450501 + Silent SNP G G T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001127255.1 -1 reviewed p.P562 0.002 134 0% 171 25.1% 1 0% - - - NULL ZNF418 147686 genome.wustl.edu 37 19 58439283 58439283 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_133460.1 -1 provisional p.A89V 0.000 145 0% 142 28.2% 1 100% benign(0.104) tolerated(0.1) neutral(0.294) PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2 SIRPA 140885 genome.wustl.edu 37 20 1895791 1895791 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001040022.1 +1 reviewed p.S42 0.000 162 0.6% 186 26.9% 4 75% - - - HMMSmart_IG,HMMPfam_V-set,superfamily_SSF48726 TMC2 117532 genome.wustl.edu 37 20 2597814 2597814 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_080751.2 +1 validated p.N679 1.000 382 0% 160 20% 0 - - - - HMMPfam_TMC IDH3B 3420 genome.wustl.edu 37 20 2639473 2639473 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006899.2 -1 reviewed p.R361Q 1.000 148 0% 127 27.6% 110 45.4% benign(0.127) tolerated(0.33) neutral(0.035) HMMPfam_Iso_dh,superfamily_Isocitrate/Isopropylmalate dehydrogenase-like SLC4A11 83959 genome.wustl.edu 37 20 3211642 3211642 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_032034.3 -1 reviewed p.A385T 1.000 503 0% 610 24.1% 12 25% probably_damaging(0.956) tolerated(0.14) deleterious(0.649) HMMPfam_HCO3_cotransp SLC4A11 83959 genome.wustl.edu 37 20 3214882 3214882 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_032034.3 -1 reviewed p.V140I 1.000 177 0% 218 27.5% 21 57.1% benign(0) tolerated(0.33) neutral(0.024) superfamily_Phoshotransferase/anion transport protein BTBD3 22903 genome.wustl.edu 37 20 11899025 11899025 + Silent SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014962.2 +1 validated p.N34 0.930 191 0% 72 11.1% 2 0% - - - NULL ESF1 51575 genome.wustl.edu 37 20 13698128 13698128 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_016649.3 -1 provisional p.E717K 1.000 439 0.2% 185 30.8% 5 40% probably_damaging(0.971) tolerated(0.13) deleterious(0.665) NULL C20orf26 26074 genome.wustl.edu 37 20 20055837 20055837 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015585.3 +1 validated p.V126M 0.967 348 0% 141 24.1% 1 0% probably_damaging(0.992) tolerated(0.13) deleterious(0.700) NULL PYGB 5834 genome.wustl.edu 37 20 25260900 25260900 + Splice_Site SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002862.3 +1 reviewed e10-2 0.995 174 0% 220 28.2% 3 100% - - - - DEFB124 245937 genome.wustl.edu 37 20 30053386 30053386 + Missense_Mutation SNP G G T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001037500.1 -1 provisional p.L47M 1.000 277 0% 342 18.7% 1 100% benign(0.029) tolerated(0.31) neutral(0.029) NULL XKR7 343702 genome.wustl.edu 37 20 30556401 30556401 + Silent SNP C C A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001011718.1 +1 provisional p.T141 1.000 23 0% 49 18.4% 0 - - - - HMMPfam_XK-related NCOA6 23054 genome.wustl.edu 37 20 33337236 33337236 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014071.2 -1 reviewed p.R921Q 1.000 170 0% 218 14.7% 4 0% possibly_damaging(0.939) deleterious(0.01) deleterious(0.790) NULL MYH7B 57644 genome.wustl.edu 37 20 33588658 33588658 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020884.3 +1 reviewed p.R1798W 1.000 174 0% 222 25.7% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Myosin_tail_1 GDF5 8200 genome.wustl.edu 37 20 34021940 34021940 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000557.2 -1 reviewed p.E425K 1.000 182 0% 197 19.3% 4 25% possibly_damaging(0.559) deleterious(0.01) deleterious(0.596) HMMPfam_TGF_beta,HMMSmart_TGFB,PatternScan_TGF_BETA_1,superfamily_SSF57501 EPB41L1 2036 genome.wustl.edu 37 20 34765928 34765928 + Missense_Mutation SNP C C A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_012156.2 +1 reviewed p.L133I 1.000 138 0% 103 18.4% 5 20% benign(0.249) deleterious(0.02) neutral(0.409) HMMPfam_FERM_N,HMMSmart_SM00295,superfamily_Ubiquitin-like EPB41L1 2036 genome.wustl.edu 37 20 34806863 34806863 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000451082 +1 known p.R206Q 1.000 88 0% 39 15.4% 24 25% - - - HMMPfam_4_1_CTD SOGA1 140710 genome.wustl.edu 37 20 35431408 35431408 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_199181.2 -1 validated p.S826P 1.000 82 0% 65 24.6% 2 0% probably_damaging(0.998) deleterious(0) deleterious(0.919) NULL TTI1 9675 genome.wustl.edu 37 20 36625349 36625349 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014657.1 -1 predicted p.R934C 0.776 108 0% 58 24.1% 8 37.5% benign(0.001) tolerated(0.18) neutral(0.056) superfamily_ARM-type_fold CHD6 84181 genome.wustl.edu 37 20 40033866 40033866 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_032221.3 -1 reviewed p.M2505I 1.000 92 0% 88 28.4% 9 55.5% benign(0.004) deleterious(0.02) neutral(0.383) NULL WFDC8 90199 genome.wustl.edu 37 20 44180670 44180670 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_130896.2 -1 reviewed p.R241C 0.000 148 0% 42 28.6% 0 - possibly_damaging(0.951) deleterious(0) deleterious(0.839) superfamily_WAP ZSWIM3 140831 genome.wustl.edu 37 20 44505731 44505733 + In_Frame_Del DEL GAA GAA - novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 GAA GAA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_080752.2 +1 validated p.K179in_frame_del 1.000:1.000:1.000 - - - - - - - - - NULL ELMO2 63916 genome.wustl.edu 37 20 45023110 45023110 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_133171.3 -1 reviewed p.P4 0.832 311 0% 110 33.6% 6 50% - - - NULL PREX1 57580 genome.wustl.edu 37 20 47273606 47273606 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020820.3 -1 reviewed p.R699C 1.000 93 0% 99 12.1% 3 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_SM00228,superfamily_PDZ domain-like ADNP 23394 genome.wustl.edu 37 20 49510578 49510578 + Nonsense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015339.2 -1 reviewed p.R225* 1.000 205 0% 121 20.7% 12 58.3% - - - HMMSmart_ZnF_C2H2 NFATC2 4773 genome.wustl.edu 37 20 50140026 50140026 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_173091.2 -1 reviewed p.R252W 1.000 31 0% 53 32.1% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) NULL DOK5 55816 genome.wustl.edu 37 20 53205049 53205049 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_018431.3 +1 reviewed p.V68I 0.998 221 0% 74 24.3% 0 - benign(0.001) tolerated(0.49) neutral(0.011) HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like GNAS 2778 genome.wustl.edu 37 20 57429114 57429114 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_080425.2 +1 reviewed p.R265H 0.397 9 0.000 23 0.217 0 - unknown(0) tolerated(0.06) - NULL GNAS 2778 genome.wustl.edu 37 20 57484249 57484249 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_080425.2 +1 reviewed p.A831V 0.750 292 0% 132 25.8% 1427 41.6% benign(0) tolerated(0.1) neutral(0.286) HMMPfam_G-alpha,superfamily_Transducin (alpha subunit) insertion domain,HMMSmart_SM00275,superfamily_P-loop containing nucleoside triphosphate hydrolases TUBB1 81027 genome.wustl.edu 37 20 57598887 57598887 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_030773.2 +1 validated p.I135 0.024 116 0% 207 27.5% 0 - - - - HMMPfam_Tubulin,superfamily_Tubulin_FtsZ SYCP2 10388 genome.wustl.edu 37 20 58444953 58444953 + Missense_Mutation SNP C C G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014258.2 -1 reviewed p.S1214T 0.000 326 0% 70 22.9% 0 - benign(0) tolerated(0.18) neutral(0.056) NULL NTSR1 4923 genome.wustl.edu 37 20 61341023 61341023 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002531.2 +1 reviewed p.T155M 0.999 51 0% 97 20.6% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321 OGFR 11054 genome.wustl.edu 37 20 61444139 61444139 + Missense_Mutation SNP G G T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_007346.2 +1 reviewed p.R391L 0.000 41 0% 58 31% 39 41% benign(0.011) tolerated(0.22) neutral(0.043) NULL BIRC7 79444 genome.wustl.edu 37 20 61869289 61869289 + Silent SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_139317.1 +1 reviewed p.Y128 0.040 43 0% 47 31.9% 3 33.3% - - - HMMPfam_BIR,HMMSmart_SM00238,PatternScan_BIR_REPEAT_1,superfamily_Inhibitor of apoptosis (IAP) repeat PRIC285 85441 genome.wustl.edu 37 20 62195168 62195168 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001037335.2 -1 reviewed p.T1669 0.017 12 0% 32 21.9% 5 40% - - - HMMPfam_RNB,PatternScan_RIBONUCLEASE_II PRIC285 85441 genome.wustl.edu 37 20 62198704 62198704 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001037335.2 -1 reviewed p.A669 0.431 28 0% 31 16.1% 4 0% - - - superfamily_P-loop containing nucleoside triphosphate hydrolases ZNF512B 57473 genome.wustl.edu 37 20 62598119 62598119 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020713.1 -1 provisional p.R137C 1.000 81 0% 158 11.4% 7 42.8% probably_damaging(0.994) deleterious(0) deleterious(0.897) NULL BACH1 571 genome.wustl.edu 37 21 30699586 30699588 + In_Frame_Del DEL GAT GAT - novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 GAT GAT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001186.2 +1 reviewed p.D482in_frame_del 0.550:0.496:0.010 - - - - - - - - - NULL KRTAP19-1 337882 genome.wustl.edu 37 21 31852624 31852624 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_181607.1 -1 provisional p.G5S 0.407 484 0% 126 13.5% 0 - unknown(0) - - NULL HUNK 30811 genome.wustl.edu 37 21 33371337 33371337 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014586.1 +1 validated p.R662Q 0.993 50 0% 41 24.4% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL URB1 9875 genome.wustl.edu 37 21 33739048 33739048 + Missense_Mutation SNP G G A rs187485893 by1000genomes TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014825.2 -1 validated p.P405L 1.000 140 0% 74 20.3% 1 0% probably_damaging(1) deleterious(0.04) deleterious(0.849) NULL IFNGR2 3460 genome.wustl.edu 37 21 34793921 34793921 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005534.3 +1 reviewed p.R114H 0.018 269 0% 143 23.1% 110 34.5% probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_Fibronectin type III ETS2 2114 genome.wustl.edu 37 21 40194717 40194717 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005239.4 +1 validated p.Y438 1.000 155 0% 174 22.4% 44 43.1% - - - HMMPfam_Ets,HMMSmart_ETS,superfamily_SSF46785 PDE9A 5152 genome.wustl.edu 37 21 44180449 44180449 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002606.2 +1 reviewed p.H303 0.120 68 0% 69 27.5% 13 61.5% - - - superfamily_HD-domain/PDEase-like TRAPPC10 7109 genome.wustl.edu 37 21 45511892 45511892 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003274.4 +1 reviewed p.D987N 0.633 342 0% 303 33.7% 15 46.6% benign(0.174) tolerated(0.42) neutral(0.030) NULL TRAPPC10 7109 genome.wustl.edu 37 21 45522765 45522765 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003274.4 +1 reviewed p.P1151 0.021 176 0% 163 16% 13 23% - - - NULL COL18A1 80781 genome.wustl.edu 37 21 46888239 46888239 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_130444.2 +1 reviewed p.V479I 0.000 41 0% 65 27.7% 131 43.5% unknown(0) deleterious(0.04) - HMMSmart_SM00210,superfamily_Concanavalin A-like lectins/glucanases SLC19A1 6573 genome.wustl.edu 37 21 46951346 46951346 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000417954 -1 known p.R37H 0.000 27 0% 41 26.8% 2 50% - - - HMMPfam_Folate_carrier COL6A2 1292 genome.wustl.edu 37 21 47538548 47538548 + Silent SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001849.3 +1 reviewed p.G379 0.999 32 0% 68 23.5% 26 0% - - - HMMPfam_Collagen LSS 4047 genome.wustl.edu 37 21 47627345 47627345 + Silent SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001001438.2 -1 reviewed p.A488 1.000 134 0% 110 26.4% 2 50% - - - superfamily_Terp_cyc_toroid CCT8L2 150160 genome.wustl.edu 37 22 17072668 17072668 + Missense_Mutation SNP G G A rs147789853 by1000genomes TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014406.4 -1 validated p.T258M 0.002 216 0% 201 20.9% 0 - probably_damaging(0.995) deleterious(0) deleterious(0.902) HMMPfam_Cpn60_TCP1,superfamily_GroEL equatorial domain-like,superfamily_GroEL apical domain-like,superfamily_GroEL-intermediate domain like IL17RA 23765 genome.wustl.edu 37 22 17589458 17589458 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014339.4 +1 reviewed p.G450D 1.000 33 0% 40 27.5% 1 100% probably_damaging(1) tolerated(0.15) deleterious(0.741) HMMPfam_SEFIR GNB1L 54584 genome.wustl.edu 37 22 19776405 19776405 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_053004.2 -1 validated p.A271T 0.999 29 0% 23 39.1% 12 41.6% probably_damaging(1) deleterious(0.03) deleterious(0.865) HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40 DGCR8 54487 genome.wustl.edu 37 22 20073611 20073611 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_022720.5 +1 validated p.T42M 1.000 63 0% 82 34.1% 7 57.1% probably_damaging(1) deleterious(0) deleterious(0.945) NULL LZTR1 8216 genome.wustl.edu 37 22 21345967 21345967 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006767.3 +1 reviewed p.P281L 0.999 33 0% 54 24.1% 6 66.6% probably_damaging(0.998) deleterious(0) deleterious(0.919) HMMSmart_SM00612,superfamily_Galactose oxidase central domain LZTR1 8216 genome.wustl.edu 37 22 21347168 21347168 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006767.3 +1 reviewed p.R412H 1.000 97 0% 111 29.7% 7 14.2% probably_damaging(0.999) tolerated(0.07) deleterious(0.809) HMMPfam_Kelch_1,superfamily_Galactose oxidase central domain SLC7A4 6545 genome.wustl.edu 37 22 21385806 21385806 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004173.2 -1 validated p.T99M 0.846 31 0% 68 23.5% 1 0% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_AA_permease HIC2 23119 genome.wustl.edu 37 22 21800951 21800951 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015094.2 +1 validated p.Y589 0.997 69 1.4% 73 26% 1 0% - - - HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers PRAME 23532 genome.wustl.edu 37 22 22899240 22899240 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_006115.3 -1 reviewed p.R5C 0.001 198 0% 186 22% 26 50% probably_damaging(0.971) - - NULL FAM211B 388886 genome.wustl.edu 37 22 24981971 24981971 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_207644.2 -1 validated p.Y277 0.995 78 0% 67 38.8% 22 27.2% - - - superfamily_RNI-like MYO18B 84700 genome.wustl.edu 37 22 26351222 26351222 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_032608.5 +1 reviewed p.Q2016 1.000 57 0% 36 16.7% 0 - - - - NULL KREMEN1 83999 genome.wustl.edu 37 22 29521324 29521324 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_032045.4 +1 reviewed p.A184V 1.000 193 0% 71 19.7% 2 50% possibly_damaging(0.575) deleterious(0.01) deleterious(0.603) HMMPfam_WSC NF2 4771 genome.wustl.edu 37 22 30070881 30070881 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000268.3 +1 reviewed p.R466Q 1.000 60 0% 27 44.4% 23 13% probably_damaging(0.963) tolerated(0.38) neutral(0.423) HMMPfam_ERM SEC14L4 284904 genome.wustl.edu 37 22 30887874 30887874 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_174977.3 -1 reviewed p.R286 0.032 100 0% 74 23% 0 - - - - superfamily_Supernatant protein factor (SPF) C-terminal domain INPP5J 27124 genome.wustl.edu 37 22 31529154 31529154 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001002837.1 +1 validated p.A387V 1.000 169 0.6% 207 24.6% 7 57.1% probably_damaging(1) deleterious(0.02) deleterious(0.883) superfamily_Exo_endo_phos LIMK2 3985 genome.wustl.edu 37 22 31661934 31661934 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001031801.1 +1 reviewed p.R265H 1.000 136 0% 145 21.4% 45 51.1% probably_damaging(1) deleterious(0.02) deleterious(0.883) NULL LIMK2 3985 genome.wustl.edu 37 22 31663886 31663886 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001031801.1 +1 reviewed p.R397H 1.000 75 0% 69 14.5% 38 50% probably_damaging(1) tolerated(0.73) deleterious(0.501) superfamily_Kinase_like,HMMPfam_Pkinase DRG1 4733 genome.wustl.edu 37 22 31819384 31819384 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004147.3 +1 validated p.V234A 1.000 193 1% 78 26.9% 41 43.9% possibly_damaging(0.584) deleterious(0) deleterious(0.645) superfamily_P-loop containing nucleoside triphosphate hydrolases SFI1 9814 genome.wustl.edu 37 22 31924815 31924815 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001007467.1 +1 validated p.T78A 0.031 131 0% 72 20.8% 4 75% possibly_damaging(0.815) deleterious(0.02) deleterious(0.691) NULL LARGE 9215 genome.wustl.edu 37 22 33828182 33828182 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004737.4 -1 reviewed p.R286H 0.999 312 0% 168 26.2% 7 42.8% possibly_damaging(0.933) deleterious(0.01) deleterious(0.784) HMMPfam_Glyco_transf_8,superfamily_Nucleotide-diphospho-sugar transferases RBFOX2 23543 genome.wustl.edu 37 22 36177771 36177771 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001082578.1 -1 reviewed p.T162I 1.000 227 0% 200 22.5% 18 38.8% probably_damaging(0.956) deleterious(0.01) deleterious(0.805) NULL APOL3 80833 genome.wustl.edu 37 22 36537945 36537945 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_145640.2 -1 reviewed p.R171H 0.000 250 0% 164 23.8% 31 32.2% probably_damaging(0.999) tolerated(0.35) deleterious(0.511) HMMPfam_ApoL APOL1 8542 genome.wustl.edu 37 22 36653378 36653378 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_145343.2 +1 reviewed p.V54I 0.000 276 0% 149 22.8% 443 48.9% possibly_damaging(0.737) tolerated(0.17) neutral(0.329) NULL MPST 4357 genome.wustl.edu 37 22 37420424 37420424 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_021126.4 +1 reviewed p.G76 0.884 5 0.000 9 0.444 36 47.2% - - - PatternScan_RHODANESE_1,HMMPfam_Rhodanese,HMMSmart_SM00450,superfamily_Rhodanese/Cell cycle control phosphatase PLA2G6 8398 genome.wustl.edu 37 22 38536013 38536013 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003560.2 -1 reviewed p.S258L 0.406 157 0% 114 20.2% 10 30% benign(0.006) tolerated(0.41) neutral(0.015) superfamily_Ankyrin repeat CACNA1I 8911 genome.wustl.edu 37 22 40066194 40066194 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_021096.3 +1 reviewed p.R1449H 0.998 323 0% 404 26% 0 - probably_damaging(0.997) tolerated(0.16) deleterious(0.526) NULL GRAP2 9402 genome.wustl.edu 37 22 40364147 40364147 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004810.2 +1 reviewed p.S187 0.028 57 0% 40 25% 5 0% - - - NULL MCHR1 2847 genome.wustl.edu 37 22 41075455 41075455 + Silent SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005297.3 +1 reviewed p.S2 1.000 53 0% 30 20% 0 - - - - NULL XPNPEP3 63929 genome.wustl.edu 37 22 41278091 41278091 + Nonsense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_022098.2 +1 validated p.R167* 0.999 124 0% 59 23.7% 1 0% - - - HMMPfam_AMP_N,superfamily_Creatinase/prolidase N-terminal domain CHADL 150356 genome.wustl.edu 37 22 41631219 41631219 + Missense_Mutation SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_138481.1 -1 validated p.K731R 0.107 96 0% 129 30.2% 9 33.3% possibly_damaging(0.485) tolerated(0.61) neutral(0.165) NULL ZC3H7B 23264 genome.wustl.edu 37 22 41738582 41738582 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_017590.4 +1 reviewed p.A416V 1.000 136 0% 151 21.9% 14 14.2% probably_damaging(0.999) tolerated(0.1) deleterious(0.777) NULL TCF20 6942 genome.wustl.edu 37 22 42609465 42609465 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005650.1 -1 reviewed p.R616Q 0.733 86 0% 77 20.8% 11 81.8% probably_damaging(0.999) deleterious(0.01) deleterious(0.896) NULL SCUBE1 80274 genome.wustl.edu 37 22 43623494 43623494 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_173050.2 -1 validated p.E365K 1.000 101 0% 98 23.5% 1 0% probably_damaging(0.998) deleterious(0) deleterious(0.919) HMMSmart_EGF_CA,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_SSF57196 TTC38 55020 genome.wustl.edu 37 22 46684374 46684374 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_017931.2 +1 validated p.S324N 0.664 116 0% 117 23.1% 27 25.9% benign(0.045) tolerated(0.42) neutral(0.017) NULL GRAMD4 23151 genome.wustl.edu 37 22 47069574 47069574 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015124.2 +1 validated p.T416M 0.992 26 0% 51 35.3% 27 44.4% probably_damaging(0.977) tolerated(0.11) deleterious(0.691) NULL ALG12 79087 genome.wustl.edu 37 22 50302892 50302892 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000492791 -1 known p.G100E 0.054 174 0% 215 26% 27 44.4% - - - HMMPfam_Glyco_transf_22 NCAPH2 29781 genome.wustl.edu 37 22 50956564 50956564 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_152299.3 +1 reviewed p.R168H 0.997 124 0% 183 25.7% 19 36.8% possibly_damaging(0.939) tolerated(0.14) deleterious(0.634) HMMPfam_DUF1032 ENSG00000215615 0 genome.wustl.edu 37 GL000218.1 39018 39018 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000400681 -1 known p.A149T NULL 112 0% 138 20.3% 0 - possibly_damaging(0.799) deleterious(0.01) deleterious(0.707) NULL MXRA5 25878 genome.wustl.edu 37 X 3242625 3242625 + Silent SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_015419.3 -1 reviewed p.C367 0.869 235 0.4% 173 21.4% 2 0% - - - NULL TBL1X 6907 genome.wustl.edu 37 X 9659626 9659626 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001139466.1 +1 reviewed p.H208 0.077 321 0% 363 24.5% 3 0% - - - NULL MAP3K15 389840 genome.wustl.edu 37 X 19390900 19390900 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001001671.3 -1 validated p.S468 0.000 82 0% 59 30.5% 0 - - - - NULL FAM48B1 100130302 genome.wustl.edu 37 X 24383089 24383089 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001136234.1 +1 inferred p.A738T 0.000 112 0% 141 21.3% 0 - - - - NULL FAM47A 158724 genome.wustl.edu 37 X 34149161 34149161 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_203408.3 -1 validated p.R412H 0.003 161 0% 183 28.4% 0 - benign(0.142) tolerated(0.08) neutral(0.312) NULL RBM10 8241 genome.wustl.edu 37 X 47030498 47030498 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005676.3 +1 reviewed p.T91 0.996 15 0% 21 28.6% 10 40% - - - NULL RBM10 8241 genome.wustl.edu 37 X 47044713 47044713 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005676.3 +1 reviewed p.E705K 0.989 184 0% 220 23.2% 55 81.8% probably_damaging(0.994) tolerated(0.13) deleterious(0.705) NULL SSX6 280657 genome.wustl.edu 37 X 47972581 47972581 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000304314 +1 known p.R137C 0.000 394 0% 593 17.4% 0 - benign(0.002) tolerated(0.15) neutral(0.241) NULL GATA1 2623 genome.wustl.edu 37 X 48649711 48649711 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002049.3 +1 reviewed p.D65 0.946 46 0% 20 40% 0 - - - - NULL GATA1 2623 genome.wustl.edu 37 X 48650870 48650870 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002049.3 +1 reviewed p.R247C 1.000 100 0% 117 26.5% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_SM00401 WDR45 11152 genome.wustl.edu 37 X 48933022 48933022 + Splice_Site SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_007075.3 -1 reviewed e8+1 1.000 109 0% 173 19.7% 3 100% - - - - PAGE1 8712 genome.wustl.edu 37 X 49455857 49455857 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003785.3 -1 reviewed p.A96V 0.000 325 0% 145 18.6% 0 - possibly_damaging(0.906) - - HMMPfam_GAGE KDM5C 8242 genome.wustl.edu 37 X 53243889 53243889 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004187.3 -1 reviewed p.C368 1.000 298 0% 204 24% 20 45% - - - HMMSmart_SM00249,superfamily_FYVE/PHD zinc finger,PatternScan_ZF_PHD_1,HMMPfam_PHD IQSEC2 23096 genome.wustl.edu 37 X 53264277 53264277 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001111125.1 -1 validated p.P1197 0.963 93 0% 100 19% 2 50% - - - NULL HUWE1 10075 genome.wustl.edu 37 X 53563593 53563593 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_031407.4 -1 reviewed p.A4058V 1.000 168 0% 111 19.8% 81 40.7% unknown(0) deleterious(0) - HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain HUWE1 10075 genome.wustl.edu 37 X 53616678 53616678 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000427052 -1 known p.V464I 0.960 529 0% 301 25.2% 11 0% - - - superfamily_ARM repeat AR 367 genome.wustl.edu 37 X 66765161 66765161 + Missense_Mutation SNP A A T rs5902610 TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000044.2 +1 reviewed p.Q58L 0.920 13 0% 19 31.6% 1 0% benign(0.386) deleterious(0.01) deleterious(0.529) HMMPfam_Androgen_recep GDPD2 54857 genome.wustl.edu 37 X 69644849 69644849 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_017711.3 +1 reviewed p.P5 0.025 53 0% 45 20% 0 - - - - NULL MED12 9968 genome.wustl.edu 37 X 70360551 70360551 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000444034 +1 known p.A233V 0.771 165 0% 177 22.6% 21 76.1% - - - NULL NONO 4841 genome.wustl.edu 37 X 70516427 70516427 + Silent SNP T T C novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000418921 +1 known p.L83P 1.000 173 0% 123 18.7% 145 0% - - - HMMPfam_NOPS,superfamily_RNA-binding domain RBD ACRC 93953 genome.wustl.edu 37 X 70823607 70823607 + Silent SNP C C T rs184215123 by1000genomes TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_052957.4 +1 validated p.D160 0.358 380 0% 263 29.3% 0 - - - - NULL MAGEE2 139599 genome.wustl.edu 37 X 75004197 75004198 + Frame_Shift_Del DEL AA AA - novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 AA AA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_138703.4 -1 validated p.F230fs 0.001:0.003 - - - - - - - - - HMMPfam_MAGE MAGEE1 57692 genome.wustl.edu 37 X 75649286 75649286 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_020932.2 +1 reviewed p.P321 0.000 25 0% 27 18.5% 0 - - - - NULL PGAM4 441531 genome.wustl.edu 37 X 77225074 77225074 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001029891.2 -1 reviewed p.R21H 1.000 100 0% 104 23.1% 0 - benign(0.267) deleterious(0) deleterious(0.473) HMMPfam_PGAM,superfamily_SSF53254 BRWD3 254065 genome.wustl.edu 37 X 79980545 79980545 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_153252.4 -1 reviewed p.V470I 1.000 195 0% 93 16.1% 1 0% probably_damaging(0.998) deleterious(0.01) deleterious(0.880) HMMSmart_SM00320,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase,HMMPfam_WD40 SRPX2 27286 genome.wustl.edu 37 X 99921756 99921756 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_014467.2 +1 reviewed p.R263C 1.000 72 0% 42 11.9% 6 16.6% probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_Complement_control_module ARMCX1 51309 genome.wustl.edu 37 X 100808643 100808643 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_016608.1 +1 reviewed p.R244C 1.000 129 0% 125 23.2% 1 0% probably_damaging(1) deleterious(0.03) deleterious(0.865) HMMPfam_DUF634,superfamily_ARM-type_fold MORC4 79710 genome.wustl.edu 37 X 106184836 106184836 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_024657.4 -1 reviewed p.R896H 1.000 197 0% 94 10.6% 9 11.1% probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL RBMXL3 139804 genome.wustl.edu 37 X 114425840 114425840 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001145346.1 +1 validated p.S612 0.995 95 0% 196 30.6% 0 - - - - NULL ZCCHC12 170261 genome.wustl.edu 37 X 117959892 117959892 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_173798.2 +1 provisional p.R229W 0.002 61 0% 103 21.4% 0 - possibly_damaging(0.926) deleterious(0.02) deleterious(0.758) NULL ENSG00000223499 0 genome.wustl.edu 37 X 118207882 118207882 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000419982 +1 known p.A199T 0.011 39 0% 151 23.2% 0 - - - - NULL UBE2A 7319 genome.wustl.edu 37 X 118717208 118717208 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_003336.2 +1 reviewed p.R150H 1.000 151 0% 138 18.8% 66 72.7% benign(0.396) tolerated(0.11) neutral(0.399) HMMSmart_SM00212,superfamily_UBC-like MRRFP1 286423 genome.wustl.edu 37 X 122250823 122250823 + Nonstop_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000435941 -1 known p.*263R 0.894 90 0% 56 19.6% 0 - - - - NULL ZNF280C 55609 genome.wustl.edu 37 X 129377604 129377604 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_017666.4 -1 validated p.S105L 0.001 205 0% 92 22.8% 0 - benign(0) tolerated(0.78) neutral(0.001) NULL IGSF1 3547 genome.wustl.edu 37 X 130410118 130410118 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001555.4 -1 reviewed p.A905T 0.982 112 0% 64 31.2% 0 - probably_damaging(0.982) tolerated(0.05) deleterious(0.772) HMMSmart_SM00408,HMMSmart_SM00409,superfamily_Immunoglobulin TFDP3 51270 genome.wustl.edu 37 X 132351528 132351528 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_016521.2 -1 reviewed p.V254M 1.000 239 0% 313 33.9% 0 - benign(0.045) deleterious(0) neutral(0.447) HMMPfam_DP F9 2158 genome.wustl.edu 37 X 138644024 138644024 + Missense_Mutation SNP A A C rs137852262 TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000133.3 +1 reviewed p.M394L 1.000 254 0% 138 32.6% 0 - probably_damaging(0.998) deleterious(0.01) deleterious(0.880) HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases MAGEC1 9947 genome.wustl.edu 37 X 140993698 140993698 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005462.4 +1 reviewed p.A170T 0.931 119 0% 185 27% 0 - unknown(0) tolerated(0.08) - NULL FMR1 2332 genome.wustl.edu 37 X 147026511 147026511 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_002024.5 +1 reviewed p.R532W 0.975 337 0% 141 23.4% 27 0% probably_damaging(1) deleterious(0.02) deleterious(0.883) NULL CXorf40A 91966 genome.wustl.edu 37 X 148627337 148627337 + Missense_Mutation SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_178124.4 +1 validated p.R54Q 0.000 286 0% 219 24.2% 18 0% benign(0.007) tolerated(0.19) neutral(0.050) NULL MTM1 4534 genome.wustl.edu 37 X 149839986 149839986 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_000252.2 +1 reviewed p.A577V 1.000 249 0% 124 25% 6 33.3% benign(0.016) tolerated(0.2) neutral(0.050) NULL ZFP92 139735 genome.wustl.edu 37 X 152686433 152686433 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001136273.1 +1 validated p.R200C 0.987 92 0% 271 18.1% 0 - - - - HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 ATP2B3 492 genome.wustl.edu 37 X 152830438 152830438 + Silent SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_001001344.2 +1 reviewed p.P1073 0.000 51 0% 67 34.3% 0 - - - - NULL PLXNB3 5365 genome.wustl.edu 37 X 153040441 153040441 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000411613 +1 known p.A52V 0.000 21 0% 38 26.3% 3 66.6% unknown(0) - - HMMPfam_Plexin_cytopl PLXNB3 5365 genome.wustl.edu 37 X 153040797 153040797 + Missense_Mutation SNP A A G novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_005393.2 +1 reviewed p.T1425A 1.000 51 0% 60 16.7% 10 0% unknown(0) tolerated(0.27) - superfamily_Rho_GAP,HMMPfam_Plexin_cytopl SRPK3 26576 genome.wustl.edu 37 X 153046623 153046623 + Silent SNP G G A novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 ENST00000430541 +1 known p.R18Q 0.005 9 0.000 19 0.368 0 - - - - NULL IDH3G 3421 genome.wustl.edu 37 X 153051850 153051850 + Missense_Mutation SNP C C T novel TCGA-B5-A11Y-01A-21D-A10M-09 TCGA-B5-A11Y-10A-01D-A10M-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 0626b6b9-fe8f-4ffc-86a2-0a96eacbe818 48d62344-eceb-4441-a97a-3f4b573df177 NM_004135.2 -1 reviewed p.A327T 1.000 375 0.3% 540 21.5% 177 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Iso_dh,superfamily_SSF53659