Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID transcript_name strand transcript_status amino_acid_change ucsc_cons normal_depth normal_vaf tumor_depth tumor_vaf rna_depth rna_vaf polyphen sift condel domain TP73-AS1 57212 genome.wustl.edu 37 1 3662744 3662744 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_207306.2 -1 predicted p.A8 0.676 16 0% 14 57.1% 11 0% - - - NULL RPL22 6146 ucsc.edu 37 1 6257785 6257785 + Frame_Shift_Del DEL T - - novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_000983.3 -1 reviewed p.K15fs 1 - - - - - - - - - HMMPfam_Ribosomal_L22e KIF1B 23095 genome.wustl.edu 37 1 10364084 10364084 + Silent SNP T T G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_183416.3 +1 reviewed p.P947 0.868 266 0% 269 29% 1 0% - - - NULL PDPN 10630 genome.wustl.edu 37 1 13936893 13936893 + Silent SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_006474.4 +1 reviewed p.S147 0.000 151 0% 143 36.4% 6 0% - - - HMMPfam_Podoplanin UBR4 23352 genome.wustl.edu 37 1 19415318 19415318 + Silent SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_020765.2 -1 validated p.R4789 0.998 67 0% 61 39.3% 66 0% - - - NULL LIN28A 79727 genome.wustl.edu 37 1 26751952 26751952 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_024674.4 +1 validated p.M129I 0.995 99 0% 111 39.6% 0 - benign(0.003) tolerated(0.19) neutral(0.050) superfamily_SSF57756 SESN2 83667 genome.wustl.edu 37 1 28599128 28599128 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_031459.3 +1 reviewed p.A192T 1.000 90 0% 83 34.9% 4 0% probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMPfam_PA26 COL16A1 1307 genome.wustl.edu 37 1 32148535 32148535 + Silent SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001856.3 -1 reviewed p.P846 1.000 38 0% 41 26.8% 9 0% - - - HMMPfam_Collagen KHDRBS1 10657 genome.wustl.edu 37 1 32502590 32502590 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_006559.1 +1 provisional p.R284H 1.000 95 0% 90 30% 131 0.7% possibly_damaging(0.905) tolerated(0.11) deleterious(0.631) NULL MACF1 23499 genome.wustl.edu 37 1 39783012 39783012 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_012090.3 +1 reviewed p.R1244C 1.000 39 0% 50 28% 1 0% probably_damaging(0.996) deleterious(0.04) deleterious(0.810) superfamily_Spectrin repeat MACF1 23499 genome.wustl.edu 37 1 39806550 39806550 + Missense_Mutation SNP T T G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_033044.2 +1 reviewed p.N1942K 0.000 129 0% 137 38.7% 0 - benign(0.017) - - HMMPfam_Spectrin,HMMSmart_SPEC,superfamily_Spectrin NFYC 4802 genome.wustl.edu 37 1 41235026 41235026 + Splice_Site SNP A A T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001142588.1 +1 reviewed e9-2 1.000 178 0.6% 168 31% 1 0% - - - - PTPRF 5792 genome.wustl.edu 37 1 44069858 44069858 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_002840.3 +1 reviewed p.Q1012R 1.000 68 0% 66 36.4% 65 0% benign(0.121) tolerated(0.53) neutral(0.017) HMMSmart_SM00060 EIF2B3 8891 genome.wustl.edu 37 1 45363068 45363068 + Nonsense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_020365.3 -1 reviewed p.Y205* 1.000 32 0% 41 31.7% 23 0% - - - superfamily_Nucleotide-diphospho-sugar transferases ZSWIM5 57643 genome.wustl.edu 37 1 45484376 45484376 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_020883.1 -1 validated p.T1103I 1.000 91 0% 107 47.7% 0 - benign(0.253) tolerated(0.47) neutral(0.037) NULL CYP4X1 260293 genome.wustl.edu 37 1 47501593 47501593 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_178033.1 +1 reviewed p.C203Y 1.000 143 0% 142 34.5% 21 0% probably_damaging(0.962) deleterious(0.01) deleterious(0.810) HMMPfam_p450,superfamily_Cytochrome P450 HEATR8 374977 genome.wustl.edu 37 1 55134555 55134555 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001039464.2 +1 validated p.S445N 0.000 84 0% 107 29.9% 0 - unknown(0) - - NULL ZNF326 284695 genome.wustl.edu 37 1 90484285 90484285 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_182976.2 +1 validated p.K372 1.000 162 0% 224 41.1% 22 0% - - - HMMPfam_AKAP95 TGFBR3 7049 genome.wustl.edu 37 1 92181940 92181940 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_003243.3 -1 validated p.S573 0.888 156 0% 148 42.6% 8 0% - - - HMMPfam_Zona_pellucida,HMMSmart_ZP AGL 178 genome.wustl.edu 37 1 100382022 100382022 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_000028.2 +1 reviewed p.L1439P 1.000 75 0% 80 40% 11 0% possibly_damaging(0.654) tolerated(0.08) deleterious(0.530) superfamily_Six-hairpin glycosidases,HMMPfam_GDE_C SLC30A7 148867 genome.wustl.edu 37 1 101387395 101387397 + In_Frame_Del DEL AAG AAG - novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 AAG AAG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001144884.1 +1 validated p.S281in_frame_del 1.000:1.000:1.000 - - - - - - - - - HMMPfam_Cation_efflux ST7L 54879 genome.wustl.edu 37 1 113119637 113119637 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_017744.4 -1 reviewed p.A406T 1.000 85 0% 90 30% 9 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_ST7 PDE4DIP 9659 genome.wustl.edu 37 1 144882825 144882825 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014644.4 -1 validated p.E1065G 1.000 279 0% 433 12% 0 - unknown(0) deleterious(0) - NULL POLR3C 10623 genome.wustl.edu 37 1 145594051 145594051 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_006468.6 -1 provisional p.R504H 0.990 244 0% 581 20.5% 78 0% benign(0.002) tolerated(0.56) neutral(0.006) NULL BNIPL 149428 genome.wustl.edu 37 1 151015491 151015491 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_138278.3 +1 validated p.G165C 0.071 160 0% 408 20.1% 2 0% possibly_damaging(0.863) deleterious(0.01) deleterious(0.739) NULL TMOD4 29765 genome.wustl.edu 37 1 151143444 151143444 + Missense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_013353.2 -1 validated p.K274N 1.000 57 0% 126 24.6% 3 0% benign(0.143) deleterious(0.01) neutral(0.418) HMMPfam_Tropomodulin,superfamily_RNI-like HRNR 388697 genome.wustl.edu 37 1 152193086 152193086 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001009931.1 -1 validated p.S340Y 0.082 126 0% 150 28.7% 0 - unknown(0) - - NULL SPRR2B 6701 genome.wustl.edu 37 1 153043128 153043128 + Missense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001017418.1 -1 provisional p.C63F 0.914 217 0% 585 21.2% 0 - unknown(0) - - NULL DENND4B 9909 genome.wustl.edu 37 1 153905226 153905226 + Silent SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014856.2 -1 validated p.A1217 1.000 57 0% 110 23.6% 12 0% - - - NULL CHRNB2 1141 genome.wustl.edu 37 1 154548278 154548278 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_000748.2 +1 reviewed p.R460H 1.000 90 0% 158 22.2% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Neur_chan_memb,superfamily_Neurotransmitter-gated ion-channel transmembrane pore ADAM15 8751 genome.wustl.edu 37 1 155025154 155025154 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000447332 +1 known p.L39P 0.000 12 0% 23 34.8% 27 0% - - - NULL DPM3 54344 genome.wustl.edu 37 1 155112671 155112671 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_018973.3 -1 reviewed p.S46P 0.964 34 0% 80 21.2% 762 0% possibly_damaging(0.923) tolerated(0.05) deleterious(0.718) HMMPfam_DPM3 FAM189B 10712 genome.wustl.edu 37 1 155217691 155217691 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_006589.2 -1 validated p.C630Y 1.000 27 0% 30 13.3% 80 0% possibly_damaging(0.9) deleterious(0) deleterious(0.801) NULL SCAMP3 10067 genome.wustl.edu 37 1 155226149 155226149 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_005698.2 -1 reviewed p.A320V 1.000 128 0% 181 17.7% 268 0.3% possibly_damaging(0.598) deleterious(0.02) deleterious(0.590) NULL ASH1L 55870 genome.wustl.edu 37 1 155340628 155340628 + Missense_Mutation SNP A A C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_018489.2 -1 reviewed p.L2160R 1.000 109 0% 273 19.8% 6 0% probably_damaging(1) deleterious(0.03) deleterious(0.865) HMMPfam_SET,HMMSmart_SM00317,superfamily_SET domain MSTO2P 100129405 genome.wustl.edu 37 1 155716718 155716718 + RNA SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NR_024117.1 +1 provisional NULL 0.000 146 0% 219 47.9% 1 0% benign(0.05) tolerated(0.19) neutral(0.053) - BCAN 63827 genome.wustl.edu 37 1 156626771 156626771 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_021948.3 +1 validated p.A698T 0.181 37 0% 73 27.4% 0 - probably_damaging(0.955) tolerated(0.39) neutral(0.415) HMMSmart_SM00034,superfamily_C-type lectin-like IFI16 3428 genome.wustl.edu 37 1 158988089 158988089 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_005531.2 +1 reviewed p.V207A 0.022 119 0% 287 21.6% 33 0% benign(0.197) tolerated(0.08) neutral(0.319) HMMPfam_HIN OR10J1 26476 genome.wustl.edu 37 1 159410218 159410218 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_012351.2 +1 validated p.V224I 0.551 213 0% 356 22.2% 0 - benign(0.069) tolerated(1) neutral(0.004) HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like APCS 325 genome.wustl.edu 37 1 159558038 159558038 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001639.3 +1 reviewed p.Y71C 0.927 237 0% 381 18.6% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Pentaxin,HMMSmart_PTX,superfamily_ConA_like_lec_gl SLAMF9 89886 genome.wustl.edu 37 1 159923923 159923923 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_033438.3 -1 reviewed p.C2Y 0.000 17 0% 40 32.5% 0 - benign(0.007) - - NULL SLAMF1 6504 genome.wustl.edu 37 1 160604638 160604638 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_003037.2 -1 validated p.N155 0.010 162 0% 305 29.5% 1 0% - - - NULL ATF6 22926 genome.wustl.edu 37 1 161751789 161751789 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_007348.2 +1 validated p.V83F 1.000 97 0% 138 17.4% 20 0% benign(0.035) tolerated(0.23) neutral(0.044) NULL DCAF6 55827 genome.wustl.edu 37 1 168032981 168032981 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_018442.2 +1 validated p.R737H 1.000 64 0% 135 15.6% 196 0.5% probably_damaging(0.998) deleterious(0.03) deleterious(0.839) HMMSmart_WD40,superfamily_WD40_like MYOC 4653 genome.wustl.edu 37 1 171605766 171605766 + Nonsense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_000261.1 -1 reviewed p.R272* 0.999 135 0% 203 23.2% 3 0% - - - HMMPfam_OLF,HMMSmart_SM00284 METTL13 51603 genome.wustl.edu 37 1 171753067 171753067 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_015935.4 +1 validated p.S114L 0.023 80 0% 144 20.1% 55 0% benign(0.174) tolerated(0.08) neutral(0.316) HMMPfam_Methyltransf_11,superfamily_S-adenosyl-L-methionine-dependent methyltransferases RC3H1 149041 genome.wustl.edu 37 1 173952773 173952773 + Silent SNP A A T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_172071.2 -1 validated p.T125 1.000 253 0% 443 18.1% 0 - - - - NULL TOR1AIP2 163590 genome.wustl.edu 37 1 179815460 179815460 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_145034.3 -1 validated p.A387T 1.000 79 0% 184 15.8% 9 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_LAP1C KIAA1614 57710 genome.wustl.edu 37 1 180905066 180905066 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_020950.1 +1 validated p.Q674R 0.000 63 0% 120 38.3% 1 0% benign(0.082) tolerated(0.57) neutral(0.012) NULL GLUL 2752 genome.wustl.edu 37 1 182354539 182354539 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001033044.2 -1 reviewed p.C252 1.000 134 0% 205 24.4% 387 0% - - - HMMPfam_Gln-synt_C,PatternScan_GLNA_ATP,superfamily_Glutamine synthetase/guanido kinase SMG7 9887 genome.wustl.edu 37 1 183513566 183513566 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_173156.2 +1 validated p.A641T 1.000 263 0% 566 22.3% 30 0% benign(0.062) tolerated(1) neutral(0.004) NULL HMCN1 83872 genome.wustl.edu 37 1 186038889 186038889 + Missense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_031935.2 +1 reviewed p.H2658Q 0.999 43 0% 107 21.5% 0 - probably_damaging(0.983) tolerated(0.39) neutral(0.445) HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin TROVE2 6738 genome.wustl.edu 37 1 193051778 193051778 + Silent SNP T T A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_004600.5 +1 validated p.T468 0.998 65 0% 153 22.2% 13 0% - - - NULL F13B 2165 genome.wustl.edu 37 1 197030114 197030114 + Silent SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001994.2 -1 reviewed p.A181 0.025 113 0% 239 11.3% 0 - - - - HMMPfam_Sushi,HMMSmart_CCP,superfamily_Complement_control_module IPO9 55705 genome.wustl.edu 37 1 201827582 201827582 + Missense_Mutation SNP C C T rs189962204 by1000genomes TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_018085.4 +1 validated p.A410V 1.000 119 0% 344 14.5% 8 0% benign(0) tolerated(0.44) neutral(0.013) superfamily_ARM repeat GPR37L1 9283 genome.wustl.edu 37 1 202096931 202096931 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_004767.3 +1 validated p.V231 1.000 40 0% 108 43.5% 0 - - - - HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like SYT2 127833 genome.wustl.edu 37 1 202569530 202569530 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001136504.1 -1 validated p.L292M 1.000 96 0% 185 20.5% 0 - benign(0.186) tolerated(0.17) neutral(0.076) HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB LAX1 54900 genome.wustl.edu 37 1 203739994 203739994 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_017773.3 +1 validated p.A43V 0.000 137 0% 352 23.3% 0 - benign(0.153) tolerated(0.62) neutral(0.018) NULL PLEKHA6 22874 genome.wustl.edu 37 1 204197228 204197228 + Missense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014935.2 -1 validated p.R1005M 1.000 28 0% 42 16.7% 11 0% probably_damaging(0.983) deleterious(0.02) deleterious(0.812) NULL NFASC 23114 genome.wustl.edu 37 1 204955130 204955130 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_015090.3 +1 reviewed p.G889 0.986 20 0% 71 26.8% 0 - - - - HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like CNTN2 6900 genome.wustl.edu 37 1 205042319 205042319 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_005076.2 +1 reviewed p.G990R 1.000 74 0% 86 58.1% 2 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_FN3,superfamily_FN_III-like NUCKS1 64710 genome.wustl.edu 37 1 205688741 205688741 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_022731.3 -1 validated p.S149L 1.000 72 0% 196 20.9% 386 0% benign(0.021) deleterious(0) neutral(0.446) NULL PM20D1 148811 genome.wustl.edu 37 1 205819082 205819082 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_152491.4 -1 validated p.P40H 1.000 76 0% 102 17.6% 0 - possibly_damaging(0.719) tolerated(0.17) neutral(0.320) NULL SLC26A9 115019 genome.wustl.edu 37 1 205896350 205896350 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_134325.2 -1 reviewed p.P428T 1.000 85 0% 153 18.3% 0 - benign(0.01) tolerated(0.36) neutral(0.021) HMMPfam_Sulfate_transp MAPKAPK2 9261 genome.wustl.edu 37 1 206905953 206905953 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_032960.2 +1 reviewed p.V365I 1.000 79 0% 89 10.1% 132 0% probably_damaging(0.969) tolerated(0.14) deleterious(0.661) superfamily_Protein kinase-like (PK-like) LAMB3 3914 genome.wustl.edu 37 1 209799271 209799271 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_000228.2 -1 reviewed p.Q566 1.000 26 0% 31 35.5% 11 0% - - - HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,PatternScan_EGF_LAM_1,superfamily_SSF57196 KCNH1 3756 genome.wustl.edu 37 1 210857425 210857425 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_172362.2 -1 reviewed p.R723Q 1.000 47 0% 72 27.8% 0 - benign(0.301) tolerated(0.27) neutral(0.127) NULL USH2A 7399 genome.wustl.edu 37 1 215953200 215953200 + Nonsense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_206933.2 -1 reviewed p.Q3642* 1.000 119 0% 179 21.2% 0 - - - - HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III USH2A 7399 genome.wustl.edu 37 1 216258046 216258046 + Nonsense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_206933.2 -1 reviewed p.G1721* 0.999 293 0% 377 14.3% 0 - - - - superfamily_Fibronectin type III,superfamily_Concanavalin A-like lectins/glucanases RAB3GAP2 25782 genome.wustl.edu 37 1 220357484 220357484 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_012414.3 -1 reviewed p.G631E 0.999 96 0% 185 15.1% 5 0% benign(0.108) tolerated(0.2) neutral(0.058) NULL MIA3 375056 genome.wustl.edu 37 1 222825568 222825568 + Splice_Site SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_198551.2 +1 validated e13-2 1.000 173 0% 314 19.4% 0 - - - - - SUSD4 55061 genome.wustl.edu 37 1 223438060 223438060 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_017982.3 -1 validated p.P212 0.120 103 0% 111 25.2% 8 0% - - - HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain NVL 4931 genome.wustl.edu 37 1 224463138 224463138 + Nonsense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000469968 -1 known p.C544* 1.000 183 0% 527 20.3% 54 0% probably_damaging(0.998) deleterious(0) deleterious(0.919) HMMSmart_SM00382,HMMPfam_AAA,superfamily_P-loop containing nucleoside triphosphate hydrolases LBR 3930 genome.wustl.edu 37 1 225598067 225598067 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_002296.2 -1 reviewed p.A414T 0.000 179 0% 307 19.9% 45 0% benign(0.009) tolerated(0.54) neutral(0.008) HMMPfam_ERG4_ERG24 ADCK3 56997 genome.wustl.edu 37 1 227174247 227174247 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_020247.4 +1 reviewed p.E585K 0.997 52 0% 84 13.1% 71 0% benign(0) tolerated(0.49) neutral(0.011) NULL CDC42BPA 8476 genome.wustl.edu 37 1 227216756 227216756 + Missense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_003607.3 -1 reviewed p.R1310L 1.000 112 0% 195 22.1% 14 0% possibly_damaging(0.505) tolerated(0.38) neutral(0.186) HMMPfam_CNH,HMMSmart_CNH OBSCN 84033 genome.wustl.edu 37 1 228509259 228509259 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001098623.1 +1 reviewed p.D4906G 0.996 27 0% 37 21.6% 2 0% probably_damaging(0.995) deleterious(0.03) deleterious(0.822) HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin RHOU 58480 genome.wustl.edu 37 1 228879202 228879202 + Silent SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_021205.4 +1 reviewed p.D164 0.914 210 0% 391 21.7% 24 0% - - - HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases HEATR1 55127 genome.wustl.edu 37 1 236732307 236732307 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_018072.4 -1 validated p.A1356T 1.000 32 0% 63 23.8% 22 0% benign(0.107) tolerated(0.69) neutral(0.011) superfamily_ARM-type_fold RYR2 6262 genome.wustl.edu 37 1 237758840 237758840 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001035.2 +1 reviewed p.S1493 1.000 79 0% 180 24.4% 0 - - - - HMMPfam_SPRY,HMMSmart_SM00449 ZP4 57829 genome.wustl.edu 37 1 238051656 238051656 + Splice_Site SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_021186.2 -1 reviewed e4+2 0.979 130 0% 262 14.5% 0 - - - - - CHRM3 1131 genome.wustl.edu 37 1 240072078 240072078 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_000740.2 +1 reviewed p.V443I 0.001 63 0% 75 25.3% 0 - benign(0) tolerated(0.2) neutral(0.049) HMMPfam_7tm_1,superfamily_SSF81321 ZNF496 84838 genome.wustl.edu 37 1 247464091 247464091 + Missense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_032752.1 -1 provisional p.E498D 0.001 35 0% 42 21.4% 16 0% benign(0.354) tolerated(0.41) neutral(0.127) NULL OR2G3 81469 genome.wustl.edu 37 1 247769146 247769146 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001001914.1 +1 provisional p.R87G 0.002 497 0% 1112 12% 0 - benign(0) tolerated(1) - HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like OR2T33 391195 genome.wustl.edu 37 1 248436682 248436682 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001004695.1 -1 provisional p.S145 0.001 212 0% 456 13.6% 0 - - - - HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like TPO 7173 genome.wustl.edu 37 2 1507851 1507851 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_000547.5 +1 reviewed p.D840Y 0.995 31 0% 44 38.6% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) superfamily_EGF/Laminin RSAD2 91543 genome.wustl.edu 37 2 7018173 7018173 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_080657.4 +1 validated p.R81H 1.000 59 0% 79 40.5% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_Elp3,HMMPfam_Radical_SAM,superfamily_SSF102114 WDR35 57539 genome.wustl.edu 37 2 20146303 20146303 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001006657.1 -1 reviewed p.Y529C 1.000 171 0% 206 37.4% 2 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_SM00320,superfamily_WD40 repeat-like HADHA 3030 genome.wustl.edu 37 2 26461844 26461844 + Missense_Mutation SNP T T G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_000182.4 -1 reviewed p.K46N 1.000 115 0% 145 35.2% 27 0% benign(0.01) tolerated(0.48) neutral(0.011) superfamily_ClpP/crotonase KCNK3 3777 genome.wustl.edu 37 2 26950546 26950546 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_002246.2 +1 reviewed p.A99T 1.000 110 0% 113 34.5% 0 - possibly_damaging(0.521) tolerated(0.1) neutral(0.462) HMMPfam_Ion_trans_2,superfamily_Voltage-gated potassium channels CAD 790 genome.wustl.edu 37 2 27446589 27446589 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_004341.3 +1 reviewed p.I323T 1.000 271 0% 328 36.6% 1 0% probably_damaging(0.995) deleterious(0) deleterious(0.902) HMMPfam_GATase,superfamily_SSF52317 GCKR 2646 genome.wustl.edu 37 2 27722316 27722316 + Missense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001486.3 +1 reviewed p.S183Y 0.998 158 0% 185 36.2% 0 - possibly_damaging(0.926) deleterious(0) deleterious(0.819) superfamily_SIS domain CLIP4 79745 genome.wustl.edu 37 2 29356615 29356615 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_024692.4 +1 validated p.L154 1.000 79 0% 106 37.7% 4 0% - - - HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat YPEL5 51646 genome.wustl.edu 37 2 30381650 30381650 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001127399.1 +1 validated p.R103C 1.000 101 0% 108 33.3% 82 0% benign(0.233) deleterious(0) neutral(0.468) HMMPfam_Yippee SOS1 6654 genome.wustl.edu 37 2 39249914 39249914 + Missense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_005633.3 -1 reviewed p.R552M 1.000 114 0% 122 34.4% 6 0% probably_damaging(1) deleterious(0) deleterious(0.945) NULL PLEKHH2 130271 genome.wustl.edu 37 2 43924457 43924457 + Nonsense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_172069.3 +1 validated p.S217* 0.875 114 0% 150 36.7% 0 - - - - NULL TSPYL6 388951 genome.wustl.edu 37 2 54482094 54482094 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001003937.2 -1 validated p.V399M 0.199 86 0% 114 41.2% 0 - probably_damaging(0.998) tolerated(0.08) deleterious(0.774) NULL EHBP1 23301 genome.wustl.edu 37 2 63206352 63206353 + Frame_Shift_Del DEL GA GA - novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 GA GA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_015252.3 +1 reviewed p.R868fs 1.000:1.000 - - - - - - - - - NULL ACTR2 10097 genome.wustl.edu 37 2 65495807 65495807 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001005386.2 +1 reviewed p.R380Q 1.000 117 0% 108 34.3% 164 0% possibly_damaging(0.524) tolerated(0.05) deleterious(0.522) HMMPfam_Actin,HMMSmart_SM00268,superfamily_Actin-like ATPase domain NAGK 55577 genome.wustl.edu 37 2 71297902 71297902 + Missense_Mutation SNP T T A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_017567.4 +1 validated p.I49N 1.000 47 0% 25 60% 54 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_BcrAD_BadFG,superfamily_SSF53067 LOXL3 84695 genome.wustl.edu 37 2 74763921 74763921 + Frame_Shift_Del DEL G G - novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_032603.2 -1 reviewed p.P276fs 0.994 - - - - - - - - - HMMPfam_SRCR,HMMSmart_SR,superfamily_Srcr_receptor ZNF2 7549 genome.wustl.edu 37 2 95847667 95847667 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000453539 +1 known p.T378I 0.984 85 0% 95 38.9% 7 0% possibly_damaging(0.918) deleterious(0) deleterious(0.813) superfamily_C2H2 and C2HC zinc fingers STARD7 56910 genome.wustl.edu 37 2 96861103 96861103 + Missense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_020151.3 -1 validated p.G159C 0.971 19 0% 28 35.7% 45 0% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_START,HMMSmart_START,superfamily_SSF55961 SNRNP200 23020 genome.wustl.edu 37 2 96952140 96952140 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014014.3 -1 reviewed p.L1304 1.000 142 0% 80 38.8% 34 0% - - - superfamily_P-loop containing nucleoside triphosphate hydrolases ST6GAL2 84620 genome.wustl.edu 37 2 107460245 107460245 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001142351.1 -1 validated p.G63 0.006 35 0% 26 38.5% 0 - - - - NULL RGPD4 285190 genome.wustl.edu 37 2 108475703 108475703 + Silent SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_182588.2 +1 validated p.S470 0.999 190 0% 275 12.7% 0 - - - - NULL CBWD2 150472 genome.wustl.edu 37 2 114251404 114251404 + Splice_Site SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_172003.3 +1 validated e12+2 0.995 348 0% 503 29% 0 - - - - - RALB 5899 genome.wustl.edu 37 2 121047253 121047253 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_002881.2 +1 reviewed p.E141K 1.000 107 0% 77 44.2% 22 0% benign(0.025) tolerated(0.16) neutral(0.060) HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases KIF5C 3800 genome.wustl.edu 37 2 149837904 149837904 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000435030 +1 known p.I466M 0.997 43 0% 48 41.7% 5 0% benign(0.002) tolerated(0.19) neutral(0.050) NULL CD302 9936 genome.wustl.edu 37 2 160639964 160639964 + Silent SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014880.4 -1 validated p.T28 0.948 86 0% 111 39.6% 1 0% - - - HMMSmart_SM00034,superfamily_C-type lectin-like PLA2R1 22925 genome.wustl.edu 37 2 160901422 160901422 + Missense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_007366.3 -1 validated p.R119M 0.420 187 0% 228 39% 1 0% possibly_damaging(0.843) deleterious(0.04) deleterious(0.672) HMMSmart_SM00458,superfamily_Ricin B-like lectins SLC4A10 57282 genome.wustl.edu 37 2 162696351 162696351 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_022058.3 +1 reviewed p.E110D 1.000 91 0% 125 38.4% 0 - possibly_damaging(0.913) tolerated(0.56) neutral(0.371) NULL SCN3A 6328 genome.wustl.edu 37 2 165947538 165947538 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_006922.3 -1 reviewed p.A1709T 1.000 331 0% 349 39% 2 0% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_Ion_trans,superfamily_SSF81324 SCN3A 6328 genome.wustl.edu 37 2 165986560 165986560 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_006922.3 -1 reviewed p.R938C 1.000 273 0% 424 35.1% 6 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Ion_trans,superfamily_SSF81324 SCN1A 6323 genome.wustl.edu 37 2 166897760 166897760 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_006920.4 -1 reviewed p.V788A 1.000 100 0% 101 34.7% 0 - benign(0.019) tolerated(0.35) neutral(0.022) superfamily_SSF81324 XIRP2 129446 genome.wustl.edu 37 2 168102906 168102906 + Silent SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_152381.4 +1 validated p.S1668 0.344 258 0.4% 308 31.2% 0 - - - - NULL XIRP2 129446 genome.wustl.edu 37 2 168107010 168107010 + Silent SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_152381.4 +1 validated p.S3036 0.686 374 0.3% 393 36.9% 0 - - - - NULL AGPS 8540 genome.wustl.edu 37 2 178301748 178301748 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_003659.3 +1 reviewed p.M201I 1.000 124 0% 148 43.2% 22 0% benign(0.007) tolerated(0.06) neutral(0.323) superfamily_FAD-binding domain TTC30B 150737 genome.wustl.edu 37 2 178416599 178416599 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_152517.2 -1 validated p.M298T 1.000 195 0% 155 35.5% 3 0% benign(0.084) deleterious(0.03) neutral(0.370) superfamily_TPR-like TTN 7273 genome.wustl.edu 37 2 179427416 179427416 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000356127 -1 known p.T25245A 0.999 89 0% 81 43.2% 0 - benign(0.074) - - HMMPfam_fn3,HMMSmart_SM00060 TTN 7273 genome.wustl.edu 37 2 179456801 179456801 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000356127 -1 known p.G17374S 1.000 32 0% 28 39.3% 0 - benign(0.29) - - HMMPfam_fn3,HMMSmart_SM00060 TTN 7273 genome.wustl.edu 37 2 179457772 179457772 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000356127 -1 known p.T17122A 1.000 123 0% 131 37.4% 0 - benign(0.014) - - HMMPfam_fn3,HMMSmart_SM00060 TTN 7273 genome.wustl.edu 37 2 179495573 179495573 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000356127 -1 known p.H12136 1.000 98 0% 96 25% 0 - - - - HMMSmart_SM00409,HMMPfam_I-set TTN 7273 genome.wustl.edu 37 2 179597807 179597807 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000356127 -1 known p.V4122M 0.918 67 0% 107 20.6% 0 - unknown(0) - - HMMSmart_SM00409,HMMPfam_I-set MFSD6 54842 genome.wustl.edu 37 2 191301376 191301376 + Silent SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_017694.3 +1 validated p.N207 0.000 199 0% 136 46.3% 2 0% - - - superfamily_MFS_gen_substrate_transporter DNAH7 56171 genome.wustl.edu 37 2 196759889 196759889 + Missense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_018897.2 -1 validated p.L1569F 0.995 56 0% 104 32.7% 0 - benign(0.036) tolerated(0.47) neutral(0.013) superfamily_P-loop containing nucleoside triphosphate hydrolases AOX1 316 genome.wustl.edu 37 2 201533417 201533417 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001159.3 +1 reviewed p.T1230I 1.000 149 0% 143 22.4% 2 0% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_Ald_Xan_dh_C2,superfamily_Molybdenum cofactor-binding domain ALS2 57679 genome.wustl.edu 37 2 202625743 202625743 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_020919.3 -1 reviewed p.M325T 0.000 146 0% 146 41.8% 9 0% benign(0) tolerated(0.6) neutral(0.004) NULL INO80D 54891 genome.wustl.edu 37 2 206920963 206920963 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_017759.4 -1 validated p.T308I 1.000 85 0% 60 43.3% 0 - probably_damaging(0.959) deleterious(0.01) deleterious(0.808) NULL PTH2R 5746 genome.wustl.edu 37 2 209358019 209358019 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_005048.2 +1 reviewed p.R430W 0.002 78 0% 72 23.6% 8 0% probably_damaging(1) deleterious(0.02) deleterious(0.883) superfamily_SSF81321 FN1 2335 genome.wustl.edu 37 2 216226339 216226339 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_212482.1 -1 reviewed p.C2458Y 1.000 112 0% 134 32.1% 234 0% possibly_damaging(0.92) deleterious(0) deleterious(0.816) NULL TNS1 7145 genome.wustl.edu 37 2 218678534 218678534 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_022648.4 -1 reviewed p.A1475T 0.018 60 0% 50 48% 5 0% benign(0) tolerated(0.06) neutral(0.323) HMMPfam_SH2,HMMSmart_SH2,superfamily_SSF55550 AAMP 14 genome.wustl.edu 37 2 219134288 219134288 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000420660 -1 known p.A12T 0.027 47 0% 27 25.9% 0 - unknown(0) tolerated(1) - NULL PLCD4 84812 genome.wustl.edu 37 2 219495468 219495468 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000458239 +1 known p.A34T 0.092 24 0% 45 28.9% 0 - - - - HMMPfam_PI-PLC-X,HMMSmart_SM00148,superfamily_PLC-like phosphodiesterases CHPF 79586 genome.wustl.edu 37 2 220404971 220404971 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_024536.5 -1 validated p.L488F 1.000 27 0% 25 40% 150 0% probably_damaging(0.994) deleterious(0.01) deleterious(0.858) HMMPfam_CHGN IRS1 3667 genome.wustl.edu 37 2 227660448 227660448 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_005544.2 -1 reviewed p.D1003N 0.998 52 0% 39 38.5% 5 0% probably_damaging(0.954) deleterious(0.02) deleterious(0.780) NULL COL6A3 1293 genome.wustl.edu 37 2 238253449 238253449 + Silent SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_004369.3 -1 reviewed p.A2404 1.000 150 0% 121 38.8% 17 0% - - - HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like ANO7 50636 genome.wustl.edu 37 2 242149746 242149746 + Missense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001001891.3 +1 validated p.L520M 0.997 26 0% 15 46.7% 0 - benign(0.37) tolerated(0.19) neutral(0.167) NULL CNTN6 27255 genome.wustl.edu 37 3 1369183 1369183 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014461.2 +1 reviewed p.L376 0.987 60 0% 57 50.9% 0 - - - - HMMSmart_IGc2,HMMPfam_I-set,superfamily_SSF48726 CNTN6 27255 genome.wustl.edu 37 3 1371480 1371480 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014461.2 +1 reviewed p.D409Y 0.990 95 0% 108 30.6% 2 0% probably_damaging(0.999) deleterious(0.01) deleterious(0.896) HMMPfam_I-set,superfamily_SSF48726 LHFPL4 375323 genome.wustl.edu 37 3 9547651 9547651 + Missense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_198560.2 -1 reviewed p.D215Y 1.000 91 0% 96 45.8% 0 - benign(0.359) deleterious(0.02) deleterious(0.497) NULL C3orf20 84077 genome.wustl.edu 37 3 14724684 14724684 + Missense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_032137.4 +1 validated p.A155D 0.995 34 0% 27 48.1% 0 - probably_damaging(0.99) deleterious(0) deleterious(0.886) NULL GALNTL2 117248 genome.wustl.edu 37 3 16250090 16250090 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_054110.4 +1 validated p.G331V 1.000 157 0% 152 40.8% 0 - probably_damaging(0.99) deleterious(0) deleterious(0.886) HMMPfam_Glycos_transf_2,superfamily_SSF53448 C3orf35 339883 genome.wustl.edu 37 3 37458873 37458873 + Missense_Mutation SNP A A C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_178339.2 +1 validated p.D39A 1.000 150 0% 194 27.8% 1 0% possibly_damaging(0.745) - - NULL TTC21A 199223 genome.wustl.edu 37 3 39178787 39178787 + Missense_Mutation SNP G G T rs188468178 by1000genomes TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001105513.2 +1 validated p.R1128L 0.999 37 0% 32 31.2% 7 0% possibly_damaging(0.653) deleterious(0.01) deleterious(0.635) superfamily_TPR-like SNRK 54861 genome.wustl.edu 37 3 43381889 43381889 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001100594.1 +1 validated p.N281S 1.000 141 0% 187 35.3% 4 0% benign(0.002) tolerated(0.83) neutral(0.001) superfamily_Protein kinase-like (PK-like) LTF 4057 genome.wustl.edu 37 3 46482911 46482911 + Silent SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_002343.2 -1 reviewed p.T573 0.000 88 0% 107 19.6% 128 0% - - - HMMPfam_Transferrin,HMMSmart_TR_FER,superfamily_SSF53850 KIF9 64147 genome.wustl.edu 37 3 47284634 47284634 + Missense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001134878.1 -1 validated p.G539V 0.001 75 0% 62 38.7% 0 - benign(0) tolerated(0.09) neutral(0.296) NULL QARS 5859 genome.wustl.edu 37 3 49135655 49135655 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_005051.1 -1 reviewed p.V707 0.995 125 0% 144 28.5% 526 0.3% - - - superfamily_Ribosomal_L25rel,HMMPfam_tRNA-synt_1c_C DAG1 1605 genome.wustl.edu 37 3 49568961 49568961 + Silent SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_004393.4 +1 reviewed p.V339 0.994 126 0% 140 38.6% 33 0% - - - HMMPfam_DAG1 DOCK3 1795 genome.wustl.edu 37 3 51267006 51267006 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_004947.3 +1 validated p.R628Q 1.000 38 0% 52 34.6% 0 - probably_damaging(0.986) tolerated(0.36) neutral(0.455) NULL DOCK3 1795 genome.wustl.edu 37 3 51392410 51392410 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_004947.3 +1 validated p.H1402R 1.000 49 0% 59 40.7% 0 - probably_damaging(0.999) tolerated(0.69) deleterious(0.492) NULL RRP9 9136 genome.wustl.edu 37 3 51967609 51967609 + Silent SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_004704.3 -1 provisional p.G447 0.990 107 0% 140 38.6% 41 0% - - - superfamily_WD40 repeat-like CRYBG3 131544 genome.wustl.edu 37 3 97607189 97607189 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_153605.2 +1 validated p.L484F 1.000 79 0% 41 26.8% 1 0% benign(0.359) deleterious(0) deleterious(0.558) HMMSmart_SM00247,superfamily_gamma-Crystallin-like MORC1 27136 genome.wustl.edu 37 3 108818274 108818274 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014429.3 -1 reviewed p.T118 1.000 133 0.8% 124 33.9% 0 - - - - superfamily_ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DPPA2 151871 genome.wustl.edu 37 3 109028085 109028085 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_138815.3 -1 validated p.I92V 0.000 190 0% 245 39.2% 0 - benign(0.003) tolerated(0.91) - HMMSmart_SAP TMPRSS7 344805 genome.wustl.edu 37 3 111766814 111766814 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001042575.2 +1 validated p.R194I 1.000 88 0% 99 32.3% 0 - probably_damaging(0.999) deleterious(0.01) deleterious(0.896) HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain KIAA2018 205717 genome.wustl.edu 37 3 113374508 113374508 + Silent SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001009899.2 -1 validated p.F2007 1.000 77 0% 67 31.3% 3 0% - - - NULL GAP43 2596 genome.wustl.edu 37 3 115395037 115395037 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001130064.1 +1 reviewed p.D106N 1.000 125 0% 135 49.6% 0 - possibly_damaging(0.887) deleterious(0.01) deleterious(0.752) HMMPfam_Neuromodulin KALRN 8997 genome.wustl.edu 37 3 123946904 123946904 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000354186 +1 known p.S23L 1.000 223 0% 243 33.7% 0 - - - - HMMSmart_SM00516,superfamily_CRAL/TRIO domain SLC12A8 84561 genome.wustl.edu 37 3 124896594 124896594 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_024628.5 -1 validated p.L205 1.000 73 0% 80 42.5% 16 0% - - - HMMPfam_AA_permease RHO 6010 genome.wustl.edu 37 3 129247606 129247606 + Silent SNP C C T rs138142023 by1000genomes TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_000539.3 +1 reviewed p.Y10 0.982 74 0% 82 54.9% 0 - - - - HMMPfam_Rhodopsin_N,superfamily_SSF81321 TMCC1 23023 genome.wustl.edu 37 3 129547008 129547008 + Nonsense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001017395.3 -1 validated p.Q72* 1.000 123 0% 94 50% 0 - - - - NULL PIK3R4 30849 genome.wustl.edu 37 3 130403135 130403135 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014602.2 -1 validated p.R1189H 1.000 203 0% 195 35.9% 36 2.7% probably_damaging(0.999) deleterious(0.01) deleterious(0.896) HMMSmart_WD40,superfamily_WD40_like AMOTL2 51421 genome.wustl.edu 37 3 134077521 134077521 + Silent SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_016201.2 -1 reviewed p.P715 0.328 38 0% 38 42.1% 7 0% - - - NULL DZIP1L 199221 genome.wustl.edu 37 3 137811252 137811252 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_173543.2 -1 validated p.V281 0.901 130 0% 165 27.3% 0 - - - - NULL COPB2 9276 genome.wustl.edu 37 3 139080051 139080051 + Missense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_004766.2 -1 validated p.Q694H 1.000 319 0.3% 282 40.4% 200 0% benign(0.001) tolerated(0.25) neutral(0.037) HMMPfam_Coatomer_WDAD ATR 545 genome.wustl.edu 37 3 142176554 142176554 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001184.3 -1 reviewed p.T2516I 1.000 83 0% 126 37.3% 42 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,superfamily_Protein kinase-like (PK-like) U2SURP 23350 genome.wustl.edu 37 3 142740359 142740359 + Missense_Mutation SNP A A C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001080415.1 +1 provisional p.S272R 1.000 89 1.1% 105 36.2% 24 0% benign(0.081) deleterious(0.02) neutral(0.389) superfamily_RNA-binding domain RBD MME 4311 genome.wustl.edu 37 3 154857980 154857980 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_000902.3 +1 reviewed p.A286T 1.000 86 0% 101 32.7% 1 0% possibly_damaging(0.772) tolerated(0.12) deleterious(0.547) "HMMPfam_Peptidase_M13_N,superfamily_Metalloproteases (""zincins"") catalytic domain" IQCJ 654502 genome.wustl.edu 37 3 158980437 158980437 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001042705.1 +1 provisional p.V86I 0.979 61 0% 58 34.5% 0 - benign(0.278) deleterious(0) deleterious(0.475) NULL GOLIM4 27333 genome.wustl.edu 37 3 167747641 167747642 + In_Frame_Ins INS - - CTG novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014498.3 -1 reviewed p.453in_frame_insQ 0.997:1.000 - - - - - - - - - NULL MECOM 2122 genome.wustl.edu 37 3 168834483 168834483 + Missense_Mutation SNP G G C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000494292 -1 known p.R393G 1.000 137 0% 152 37.5% 8 0% probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers YEATS2 55689 genome.wustl.edu 37 3 183521940 183521940 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_018023.4 +1 validated p.I1250V 1.000 73 0% 111 34.2% 14 0% possibly_damaging(0.54) tolerated(0.15) neutral(0.424) NULL AP2M1 1173 genome.wustl.edu 37 3 183898017 183898017 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_004068.3 +1 reviewed p.T134M 1.000 32 0% 28 35.7% 168 0.5% probably_damaging(0.99) deleterious(0) deleterious(0.886) superfamily_SNARE-like IGF2BP2 10644 genome.wustl.edu 37 3 185367217 185367217 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_006548.4 -1 reviewed p.R523W 1.000 54 1.9% 72 41.7% 3 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_SM00322,HMMPfam_KH_1,superfamily_Eukaryotic type KH-domain (KH-domain type I) TP63 8626 genome.wustl.edu 37 3 189586386 189586386 + Missense_Mutation SNP G G T rs113993967 byCluster TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_003722.4 +1 reviewed p.R337L 1.000 154 0% 128 42.2% 0 - probably_damaging(0.998) deleterious(0.01) deleterious(0.880) superfamily_p53-like transcription factors,HMMPfam_P53 WHSC1 7468 genome.wustl.edu 37 4 1932444 1932444 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001042424.2 +1 reviewed p.R501H 1.000 24 0% 54 35.2% 25 0% probably_damaging(0.999) deleterious(0.01) deleterious(0.896) HMMPfam_HMG_box,HMMSmart_SM00398,superfamily_HMG-box KIAA0232 9778 genome.wustl.edu 37 4 6865499 6865499 + Missense_Mutation SNP A A C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001100590.1 +1 validated p.K1130N 1.000 173 0% 183 44.8% 3 0% benign(0.411) deleterious(0.01) deleterious(0.538) NULL DRD5 1816 genome.wustl.edu 37 4 9784399 9784399 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_000798.4 +1 reviewed p.Y249C 1.000 58 0% 70 57.1% 0 - probably_damaging(0.993) deleterious(0) deleterious(0.895) HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like KLB 152831 genome.wustl.edu 37 4 39439476 39439476 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_175737.3 +1 validated p.E489G 1.000 199 0% 273 36.6% 0 - probably_damaging(0.963) deleterious(0.04) deleterious(0.754) HMMPfam_Glyco_hydro_1,superfamily_Glyco_hydro_cat ATP10D 57205 genome.wustl.edu 37 4 47548742 47548742 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_020453.3 +1 validated p.S500G 0.398 308 0% 357 26.1% 2 0% benign(0.002) tolerated(0.32) neutral(0.024) superfamily_HAD-like KIT 3815 genome.wustl.edu 37 4 55598144 55598144 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_000222.2 +1 reviewed p.A781T 1.000 106 0% 101 38.6% 0 - possibly_damaging(0.724) tolerated(0.14) deleterious(0.512) HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like BMP2K 55589 genome.wustl.edu 37 4 79792164 79792166 + In_Frame_Del DEL CAC CAC - novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 CAC CAC Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_198892.1 +1 reviewed p.H490in_frame_del 0.893:0.884:0.883 - - - - - - - - - NULL FGF5 2250 genome.wustl.edu 37 4 81188029 81188029 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_004464.3 +1 reviewed p.S17 1.000 56 0% 48 31.2% 0 - - - - NULL MAPK10 5602 genome.wustl.edu 37 4 87080462 87080462 + Missense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_138982.2 -1 reviewed p.Q75H 1.000 162 0% 143 40.6% 0 - probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase TRPC3 7222 genome.wustl.edu 37 4 122853513 122853513 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001130698.1 -1 validated p.L300 1.000 53 0% 63 49.2% 0 - - - - HMMPfam_TRP_2 INTU 27152 genome.wustl.edu 37 4 128621177 128621177 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_015693.3 +1 validated p.M488V 0.998 147 0% 160 39.4% 2 0% benign(0) tolerated(0.16) neutral(0.059) NULL PCDH18 54510 genome.wustl.edu 37 4 138451839 138451839 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_019035.3 -1 reviewed p.S468 1.000 264 0% 246 43.1% 0 - - - - superfamily_Cadherin-like NDUFC1 4717 genome.wustl.edu 37 4 140213765 140213765 + Splice_Site SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_002494.3 -1 reviewed e3-2 0.994 21 0% 25 44% 0 - - - - - SETD7 80854 genome.wustl.edu 37 4 140432984 140432984 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_030648.2 -1 validated p.R312C 1.000 84 0% 59 33.9% 7 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_SET,HMMSmart_SM00317,superfamily_SET domain LRBA 987 genome.wustl.edu 37 4 151186914 151186914 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_006726.2 -1 validated p.D2851G 1.000 39 0% 94 38.3% 48 2% probably_damaging(0.999) deleterious(0.01) deleterious(0.896) superfamily_WD40 repeat-like PDGFC 56034 genome.wustl.edu 37 4 157684306 157684306 + Missense_Mutation SNP G G C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_016205.1 -1 reviewed p.T325S 0.999 119 0% 112 33.9% 27 0% benign(0.032) tolerated(0.35) neutral(0.022) HMMPfam_PDGF,HMMSmart_SM00141,superfamily_Cystine-knot cytokines CEP44 80817 genome.wustl.edu 37 4 175220280 175220280 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001145314.1 +1 validated p.T3I 0.999 62 0% 92 37% 3 0% probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL ODZ3 55714 genome.wustl.edu 37 4 183714193 183714193 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001080477.1 +1 provisional p.A2123V 1.000 148 0% 117 29.9% 0 - probably_damaging(0.989) tolerated(0.13) deleterious(0.692) NULL ING2 3622 genome.wustl.edu 37 4 184431867 184431867 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001564.2 +1 validated p.P202L 1.000 111 0% 130 38.5% 56 0% probably_damaging(1) deleterious(0.01) deleterious(0.905) NULL ZFP42 132625 genome.wustl.edu 37 4 188924186 188924186 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_174900.3 +1 validated p.C75 0.446 139 0% 131 45.8% 0 - - - - NULL TRIML1 339976 genome.wustl.edu 37 4 189060949 189060949 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_178556.3 +1 provisional p.R79S 0.817 27 0% 79 41.8% 0 - possibly_damaging(0.542) deleterious(0.01) deleterious(0.589) superfamily_SSF57850 KIAA0947 23379 genome.wustl.edu 37 5 5464894 5464894 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_015325.1 +1 validated p.D1816G 0.074 45 0% 54 38.9% 9 0% probably_damaging(0.978) deleterious(0) deleterious(0.865) NULL SPEF2 79925 genome.wustl.edu 37 5 35641736 35641736 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_024867.3 +1 validated p.R122H 0.894 170 0% 164 38.4% 3 0% possibly_damaging(0.683) tolerated(0.08) deleterious(0.543) HMMPfam_DUF1042 DHX29 54505 genome.wustl.edu 37 5 54579080 54579080 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_019030.2 -1 validated p.A639V 1.000 175 0% 147 23.1% 10 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_DEAD,HMMSmart_DEXDc,superfamily_SSF52540 MAST4 375449 genome.wustl.edu 37 5 66459210 66459210 + Silent SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000443808 +1 known p.T458A 0.772 67 0% 59 47.5% 4 0% - - - NULL PIK3R1 5295 genome.wustl.edu 37 5 67591125 67591125 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_181523.1 +1 reviewed p.L573P 1.000 150 0% 192 35.4% 89 0% probably_damaging(1) deleterious(0) deleterious(0.945) NULL POLK 51426 genome.wustl.edu 37 5 74892527 74892527 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_016218.2 +1 validated p.N670S 0.000 166 0% 190 40% 15 0% unknown(0) deleterious(0.01) - NULL ARSB 411 genome.wustl.edu 37 5 78264838 78264838 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_000046.3 -1 reviewed p.T164A 0.998 170 0% 147 40.8% 3 0% benign(0.042) deleterious(0.02) neutral(0.386) HMMPfam_Sulfatase,superfamily_Alkaline_phosphatase_core SSBP2 23635 genome.wustl.edu 37 5 80736414 80736414 + Silent SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_012446.2 -1 validated p.L297 1.000 71 0% 58 41.4% 15 0% - - - NULL VCAN 1462 genome.wustl.edu 37 5 82808110 82808110 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_004385.4 +1 reviewed p.A313T 0.985 34 0% 26 34.6% 0 - probably_damaging(0.99) tolerated(0.31) deleterious(0.469) HMMPfam_Xlink,HMMSmart_SM00445,PatternScan_LINK_1,superfamily_C-type lectin-like RASA1 5921 genome.wustl.edu 37 5 86672237 86672237 + Nonsense_Mutation SNP T T A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_002890.1 +1 reviewed p.L680* 1.000 95 0% 83 41% 12 0% - - - HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB) CCNH 902 genome.wustl.edu 37 5 86695218 86695218 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001239.2 -1 reviewed p.V289I 0.010 245 0% 303 42.6% 65 0% benign(0) tolerated(0.46) neutral(0.012) NULL GPR98 84059 genome.wustl.edu 37 5 90007115 90007115 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000509621 +1 known p.G572D 0.813 116 0% 104 27.9% 1 0% - - - HMMPfam_Calx-beta,HMMSmart_SM00237 DMXL1 1657 genome.wustl.edu 37 5 118506466 118506466 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_005509.4 +1 validated p.D1994N 0.049 191 0% 167 34.1% 1 0% benign(0) tolerated(0.33) neutral(0.024) NULL SEC24A 10802 genome.wustl.edu 37 5 134050742 134050742 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_021982.1 +1 validated p.R919H 1.000 48 0% 76 46.1% 12 0% probably_damaging(0.999) deleterious(0.01) deleterious(0.896) HMMPfam_Sec23_helical,superfamily_Helical domain of Sec23/24 KDM3B 51780 genome.wustl.edu 37 5 137727019 137727019 + Silent SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_016604.3 +1 validated p.S566 0.998 84 0% 85 20% 4 0% - - - NULL IK 3550 genome.wustl.edu 37 5 140032593 140032594 + Frame_Shift_Del DEL GA GA - novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 GA GA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_006083.3 +1 reviewed p.R93fs 1.000:1.000 - - - - - - - - - HMMPfam_RED_N PCDHA1 56147 genome.wustl.edu 37 5 140166269 140166269 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_018900.2 +1 reviewed p.V132I 0.000 90 0% 98 25.5% 0 - benign(0.002) tolerated(0.48) neutral(0.011) superfamily_Cadherin-like PCDHA4 56144 genome.wustl.edu 37 5 140188703 140188703 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_018907.2 +1 reviewed p.R644H 0.013 41 0% 61 57.4% 3 0% possibly_damaging(0.485) deleterious(0.03) deleterious(0.525) HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like PCDHA6 56142 genome.wustl.edu 37 5 140209211 140209211 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_018909.2 +1 reviewed p.A512V 1.000 34 0% 39 25.6% 0 - benign(0.022) deleterious(0) neutral(0.446) HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like PCDHA7 56141 genome.wustl.edu 37 5 140215247 140215247 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_018910.2 +1 reviewed p.A427T 0.992 57 0% 88 21.6% 0 - probably_damaging(0.991) deleterious(0.01) deleterious(0.850) HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like PCDHB6 56130 genome.wustl.edu 37 5 140531450 140531450 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_018939.2 +1 reviewed p.A538T 0.437 137 0% 145 42.8% 0 - possibly_damaging(0.738) tolerated(0.14) deleterious(0.520) HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin PCDHB18 54660 genome.wustl.edu 37 5 140615768 140615768 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000274705 +1 known p.R495C 0.932 49 0% 80 40% 0 - - - - HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin PCDHB15 56121 genome.wustl.edu 37 5 140625975 140625975 + Missense_Mutation SNP A A C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_018935.2 +1 reviewed p.I277L 0.011 66 0% 107 36.4% 0 - benign(0.001) tolerated(0.12) neutral(0.261) HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin PCDHGA3 56112 genome.wustl.edu 37 5 140724196 140724196 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_018916.3 +1 reviewed p.A199V 0.008 136 0% 155 39.4% 0 - benign(0.02) tolerated(0.09) neutral(0.297) HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like PCDHGA5 56110 genome.wustl.edu 37 5 140744033 140744033 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_018918.2 +1 reviewed p.G46C 1.000 30 0% 46 21.7% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like ARAP3 64411 genome.wustl.edu 37 5 141039479 141039479 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_022481.5 -1 reviewed p.A1045V 1.000 22 0% 24 29.2% 7 0% probably_damaging(0.999) deleterious(0.01) deleterious(0.896) HMMPfam_RhoGAP,HMMSmart_RhoGAP,superfamily_Rho_GAP DCTN4 51164 genome.wustl.edu 37 5 150099305 150099305 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001135643.1 -1 validated p.M319I 1.000 61 0% 82 22% 14 0% benign(0.001) tolerated(0.23) neutral(0.042) HMMPfam_Dynactin_p62 ZNF300 91975 genome.wustl.edu 37 5 150276199 150276199 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_052860.2 -1 reviewed p.P201L 0.000 210 0% 253 40.7% 0 - benign(0) tolerated(0.66) neutral(0.003) NULL G3BP1 10146 genome.wustl.edu 37 5 151175128 151175128 + Silent SNP A A T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_005754.2 +1 reviewed p.A177 0.947 187 0% 171 36.8% 48 0% - - - NULL GALNT10 55568 genome.wustl.edu 37 5 153792522 153792522 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_198321.3 +1 reviewed p.G487D 0.977 33 0% 28 35.7% 20 0% benign(0) tolerated(0.61) neutral(0.004) HMMPfam_Ricin_B_lectin,HMMSmart_SM00458,superfamily_Ricin B-like lectins LARP1 23367 genome.wustl.edu 37 5 154174839 154174839 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_015315.3 +1 validated p.R369L 1.000 88 0% 111 36.9% 22 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_La,HMMSmart_LA,superfamily_SSF46785 ATP10B 23120 genome.wustl.edu 37 5 160071242 160071242 + Silent SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_025153.2 -1 validated p.P257 0.974 65 0% 73 35.6% 0 - - - - HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A CCNG1 900 genome.wustl.edu 37 5 162868936 162868936 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_004060.3 +1 reviewed p.A188V 1.000 104 0% 108 27.8% 62 0% probably_damaging(1) deleterious(0.01) deleterious(0.905) NULL UBTD2 92181 genome.wustl.edu 37 5 171661180 171661180 + Missense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_152277.2 -1 validated p.D85Y 1.000 152 0% 216 41.2% 9 0% probably_damaging(1) deleterious(0) deleterious(0.945) NULL KIAA1191 57179 genome.wustl.edu 37 5 175775296 175775296 + Missense_Mutation SNP T T A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001079685.1 -1 validated p.T175S 1.000 56 1.8% 95 36.8% 94 0% unknown(0) - - NULL NOP16 51491 genome.wustl.edu 37 5 175811341 175811341 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_016391.4 -1 provisional p.D143G 1.000 53 0% 54 38.9% 88 0% possibly_damaging(0.861) tolerated(0.06) deleterious(0.655) HMMPfam_Nop16 GPRIN1 114787 genome.wustl.edu 37 5 176025140 176025140 + Nonsense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_052899.2 -1 validated p.Q566* 0.000 123 0% 24 16.7% 1 0% - - - NULL FGFR4 2264 genome.wustl.edu 37 5 176520134 176520134 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000377207 +1 known p.R579S 0.027 97 0% 66 37.9% 1 0% benign(0.018) deleterious(0.01) neutral(0.406) NULL NSD1 64324 genome.wustl.edu 37 5 176684064 176684064 + Silent SNP T T G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_022455.4 +1 reviewed p.T1626 0.847 97 0% 134 37.3% 13 0% - - - HMMSmart_SM00249 NSD1 64324 genome.wustl.edu 37 5 176721760 176721760 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_022455.4 +1 reviewed p.R2464H 1.000 108 0% 126 37.3% 18 0% benign(0.002) tolerated(0.26) neutral(0.034) NULL SLC34A1 6569 genome.wustl.edu 37 5 176815170 176815170 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_003052.4 +1 reviewed p.F274L 1.000 47 0% 51 51% 0 - benign(0.021) tolerated(0.64) neutral(0.004) NULL ZNF354C 30832 genome.wustl.edu 37 5 178506265 178506265 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014594.1 +1 provisional p.E278K 1.000 208 0% 282 29.4% 1 0% probably_damaging(0.99) deleterious(0.04) deleterious(0.790) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667 DSP 1832 genome.wustl.edu 37 6 7584543 7584543 + Missense_Mutation SNP T T G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_004415.2 +1 reviewed p.L2350V 0.966 122 0% 171 33.9% 21 4.7% possibly_damaging(0.943) tolerated(0.09) deleterious(0.684) HMMSmart_SM00250,superfamily_Plakin repeat GMPR 2766 genome.wustl.edu 37 6 16290830 16290830 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_006877.3 +1 reviewed p.A279T 0.990 142 0% 105 24.8% 338 0% benign(0) tolerated(0.28) neutral(0.032) HMMPfam_IMPDH,superfamily_SSF51412 HIST1H1A 3024 genome.wustl.edu 37 6 26017723 26017723 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_005325.3 -1 reviewed p.N80D 1.000 58 0% 60 35% 0 - probably_damaging(0.998) deleterious(0.05) deleterious(0.820) HMMPfam_Linker_histone,HMMSmart_H15,superfamily_SSF46785 OR2B2 81697 genome.wustl.edu 37 6 27879862 27879862 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_033057.2 -1 validated p.P79Q 1.000 178 0% 251 43.4% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like NKAPL 222698 genome.wustl.edu 37 6 28227385 28227385 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001007531.1 +1 provisional p.R79H 0.002 55 0% 54 38.9% 0 - unknown(0) tolerated(0.06) - NULL DHX16 8449 genome.wustl.edu 37 6 30621111 30621111 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_003587.4 -1 reviewed p.A1012T 1.000 53 0% 75 37.3% 59 0% benign(0.249) deleterious(0) deleterious(0.470) HMMPfam_DUF1605 DDR1 780 genome.wustl.edu 37 6 30864799 30864799 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000514434 +1 known p.V118M 1.000 122 0% 124 33.9% 69 0% - - - HMMPfam_Pkinase_Tyr RXRB 6257 genome.wustl.edu 37 6 33162787 33162787 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_021976.3 -1 reviewed p.L463 0.996 20 0% 23 43.5% 35 0% - - - HMMPfam_Hormone_recep,HMMSmart_SM00430,superfamily_Nuclear receptor ligand-binding domain DNAH8 1769 genome.wustl.edu 37 6 38893829 38893829 + Splice_Site SNP A A C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001371.2 +1 validated e70-2 0.969 287 0% 338 37.3% 0 - - - - - PRICKLE4 29964 genome.wustl.edu 37 6 41751310 41751310 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_013397.5 +1 validated p.L33 0.001 79 0% 81 38.3% 3 0% - - - NULL TTBK1 84630 genome.wustl.edu 37 6 43251506 43251506 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_032538.1 +1 validated p.A1010T 0.567 75 0% 55 43.6% 0 - benign(0) tolerated(0.17) neutral(0.059) NULL ABCC10 89845 genome.wustl.edu 37 6 43410795 43410795 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_033450.2 +1 reviewed p.M744V 0.022 40 0% 30 50% 9 0% benign(0) tolerated(0.21) neutral(0.044) HMMPfam_ABC_tran,HMMSmart_AAA,superfamily_SSF52540 SLC29A1 2030 genome.wustl.edu 37 6 44197372 44197372 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001078174.1 +1 reviewed p.T53I 0.001 65 0% 57 40.4% 21 0% benign(0.029) tolerated(0.05) neutral(0.347) NULL DST 667 genome.wustl.edu 37 6 56471184 56471184 + Nonsense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000370769 -1 known p.G2537* 0.000 76 0% 83 44.6% 0 - - - - NULL FAM46A 55603 genome.wustl.edu 37 6 82459640 82459640 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_017633.2 -1 validated p.V367 1.000 107 0% 128 39.8% 0 - - - - HMMPfam_DUF1693 ZNF292 23036 genome.wustl.edu 37 6 87943239 87943239 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_015021.1 +1 validated p.I245 0.779 137 0% 148 32.4% 5 0% - - - NULL ZNF292 23036 genome.wustl.edu 37 6 87970334 87970334 + Missense_Mutation SNP A A T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_015021.1 +1 validated p.K2329N 0.387 175 0% 177 37.3% 16 0% benign(0.2) tolerated(0.1) neutral(0.305) NULL ASCC3 10973 genome.wustl.edu 37 6 101315843 101315843 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_006828.2 -1 validated p.R11C 1.000 52 0% 57 35.1% 1 0% probably_damaging(1) deleterious(0) deleterious(0.945) NULL TRAF3IP2 10758 genome.wustl.edu 37 6 111912592 111912592 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_147686.2 -1 reviewed p.S233F 1.000 73 0% 92 13% 52 0% probably_damaging(0.996) deleterious(0) deleterious(0.906) NULL CTAGE9 643854 genome.wustl.edu 37 6 132031655 132031655 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001145659.1 -1 provisional p.A168V 0.000 494 0% 672 11.2% 5 0% benign(0.001) tolerated(0.12) neutral(0.261) NULL VTA1 51534 genome.wustl.edu 37 6 142468536 142468536 + Missense_Mutation SNP T T G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_016485.3 +1 provisional p.C38G 1.000 33 0% 48 37.5% 16 0% probably_damaging(1) tolerated(0.1) deleterious(0.786) HMMPfam_DUF605 UTRN 7402 genome.wustl.edu 37 6 144803358 144803358 + Missense_Mutation SNP A A T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_007124.2 +1 reviewed p.D1174V 1.000 93 0% 130 36.2% 3 0% benign(0.001) deleterious(0) neutral(0.445) HMMPfam_Spectrin,HMMSmart_SPEC,superfamily_Spectrin RSPH3 83861 genome.wustl.edu 37 6 159398823 159398823 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_031924.4 -1 validated p.T477I 0.000 233 0% 285 26% 6 0% benign(0.403) tolerated(0.37) neutral(0.148) NULL QKI 9444 genome.wustl.edu 37 6 163984613 163984613 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_006775.2 +1 validated p.G266R 1.000 168 0% 152 33.6% 11 0% probably_damaging(0.998) deleterious(0) deleterious(0.919) NULL FAM120B 84498 genome.wustl.edu 37 6 170626883 170626883 + Silent SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_032448.1 +1 provisional p.S135 0.005 79 0% 114 35.1% 10 0% - - - superfamily_PIN domain-like DNAH11 8701 genome.wustl.edu 37 7 21678684 21678684 + Splice_Site SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_003777.3 +1 reviewed e28+1 1.000 138 0% 196 32.1% 0 - - - - - RAPGEF5 9771 genome.wustl.edu 37 7 22184789 22184789 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_012294.3 -1 validated p.A534T 0.982 56 0% 67 37.3% 1 0% benign(0.005) deleterious(0.01) neutral(0.406) HMMPfam_RasGEF,HMMSmart_SM00147,superfamily_Ras GEF LOC402644 402644 genome.wustl.edu 37 7 28319213 28319213 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001126493.1 -1 predicted p.V36I 1.000 156 0% 287 26.8% 0 - - - - HMMPfam_Pro_isomerase,superfamily_CSA_PPIase DPY19L1 23333 genome.wustl.edu 37 7 35050097 35050097 + Silent SNP T T A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_015283.1 -1 validated p.I176 0.995 68 0% 82 50% 2 0% - - - HMMPfam_DUF2211 NPC1L1 29881 genome.wustl.edu 37 7 44578791 44578791 + Missense_Mutation SNP C C G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_013389.2 -1 reviewed p.G402A 1.000 61 0% 64 26.6% 0 - probably_damaging(0.997) tolerated(0.21) deleterious(0.510) NULL ZMIZ2 83637 genome.wustl.edu 37 7 44802913 44802913 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_031449.3 +1 validated p.D587 0.946 65 0% 72 16.7% 50 2% - - - superfamily_RING/U-box MYO1G 64005 genome.wustl.edu 37 7 45005292 45005292 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_033054.2 -1 validated p.P775 0.000 7 0.000 21 0.381 4 0% - - - NULL RAMP3 10268 genome.wustl.edu 37 7 45222934 45222934 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_005856.2 +1 reviewed p.V124I 0.000 54 0% 69 27.5% 26 0% benign(0.004) tolerated(0.25) neutral(0.037) HMMPfam_RAMP ADCY1 107 genome.wustl.edu 37 7 45717468 45717468 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_021116.2 +1 reviewed p.R536W 1.000 99 1% 149 24.2% 0 - probably_damaging(0.999) deleterious(0.03) deleterious(0.855) NULL TNS3 64759 genome.wustl.edu 37 7 47408402 47408402 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_022748.10 -1 validated p.R614H 0.000 32 0% 32 28.1% 6 0% benign(0.002) tolerated(0.11) neutral(0.272) NULL FIGNL1 63979 genome.wustl.edu 37 7 50514325 50514325 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001042762.1 -1 validated p.F221L 0.997 152 0% 226 57.5% 3 0% possibly_damaging(0.442) tolerated(0.44) neutral(0.157) NULL GRB10 2887 genome.wustl.edu 37 7 50694568 50694568 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_005311.4 -1 reviewed p.V204 1.000 161 0% 240 19.6% 9 0% - - - HMMPfam_RA,HMMSmart_SM00314 GNAT3 346562 genome.wustl.edu 37 7 80117901 80117901 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001102386.1 -1 provisional p.V85M 1.000 23 0% 45 66.7% 0 - benign(0.024) deleterious(0) neutral(0.446) HMMPfam_G-alpha,superfamily_Transducin (alpha subunit) insertion domain,HMMSmart_SM00275,superfamily_P-loop containing nucleoside triphosphate hydrolases PCLO 27445 genome.wustl.edu 37 7 82584586 82584586 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_033026.5 -1 validated p.P1895S 0.997 239 0% 415 28% 0 - probably_damaging(0.998) - - NULL DMTF1 9988 genome.wustl.edu 37 7 86815274 86815274 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001142327.1 +1 reviewed p.N393 1.000 161 0% 236 30.5% 9 0% - - - NULL PPP1R9A 55607 genome.wustl.edu 37 7 94917899 94917899 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_017650.2 +1 validated p.V985I 0.999 104 0% 144 25% 2 0% benign(0.282) tolerated(0.26) neutral(0.120) HMMSmart_SM00454,superfamily_SAM/Pointed domain,HMMPfam_SAM_2 ZKSCAN1 7586 genome.wustl.edu 37 7 99621800 99621800 + Silent SNP T T A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_003439.1 +1 validated p.P150 1.000 83 0% 175 33.1% 6 0% - - - HMMSmart_SM00431 CDHR3 222256 genome.wustl.edu 37 7 105658315 105658315 + Nonsense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_152750.4 +1 validated p.R484* 0.165 31 0% 39 20.5% 2 0% - - - HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like LAMB4 22798 genome.wustl.edu 37 7 107720180 107720180 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_007356.2 -1 validated p.P585S 0.603 75 0% 124 34.7% 0 - benign(0.001) tolerated(0.4) neutral(0.016) NULL RNF148 378925 genome.wustl.edu 37 7 122342425 122342425 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_198085.1 -1 validated p.V127A 1.000 328 0% 406 28.3% 0 - possibly_damaging(0.61) tolerated(0.19) neutral(0.261) HMMPfam_PA,superfamily_SSF52025 SLC13A1 6561 genome.wustl.edu 37 7 122808448 122808448 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_022444.3 -1 validated p.S214G 0.894 78 0% 126 16.7% 0 - benign(0) tolerated(0.08) neutral(0.300) HMMPfam_Na_sulph_symp GCC1 79571 genome.wustl.edu 37 7 127223231 127223231 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_024523.5 -1 reviewed p.L389M 1.000 85 0% 142 26.1% 8 0% benign(0.006) tolerated(0.18) neutral(0.056) NULL PLXNA4 91584 genome.wustl.edu 37 7 131849951 131849951 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_020911.1 -1 validated p.S1432L 1.000 48 0% 62 33.9% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_GTPase activation domain GAP,HMMPfam_Plexin_cytopl UBN2 254048 genome.wustl.edu 37 7 138921782 138921782 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_173569.3 +1 validated p.N84S 1.000 151 0% 382 55.5% 0 - benign(0.018) tolerated(0.35) neutral(0.021) NULL TRBV4-1 28617 genome.wustl.edu 37 7 142013409 142013409 + Silent SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000390357 +1 known p.P88 0.000 198 0% 328 58.5% 1 0% - - - HMMPfam_V-set,superfamily_Immunoglobulin EPHB6 2051 genome.wustl.edu 37 7 142565466 142565466 + Silent SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_004445.3 +1 reviewed p.V617 0.247 13 0.000 8 0.625 1 0% - - - NULL CASP2 835 genome.wustl.edu 37 7 143001010 143001010 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_032982.2 +1 reviewed p.G367 1.000 31 0% 56 58.9% 19 0% - - - HMMPfam_Peptidase_C14,HMMSmart_SM00115,superfamily_Caspase-like ZNF746 155061 genome.wustl.edu 37 7 149174844 149174844 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_152557.4 -1 validated p.S175P 0.958 18 0% 19 57.9% 8 0% possibly_damaging(0.727) tolerated(0.12) deleterious(0.525) NULL GIMAP6 474344 genome.wustl.edu 37 7 150325176 150325176 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_024711.4 -1 reviewed p.G170 0.000 159 0% 250 28% 2 0% - - - HMMPfam_AIG1,superfamily_P-loop containing nucleoside triphosphate hydrolases TMUB1 83590 genome.wustl.edu 37 7 150779405 150779405 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_031434.3 -1 validated p.Q82 0.997 48 0% 22 27.3% 189 0% - - - NULL MLL3 58508 genome.wustl.edu 37 7 151876996 151876996 + Nonsense_Mutation SNP A A C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_170606.2 -1 reviewed p.Y2455* 0.010 208 0% 289 25.6% 1 0% - - - NULL PAXIP1 22976 genome.wustl.edu 37 7 154755423 154755423 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_007349.3 -1 reviewed p.T649 0.252 51 0% 53 24.5% 9 0% - - - HMMPfam_BRCT,HMMSmart_SM00292,superfamily_BRCT domain NCAPG2 54892 genome.wustl.edu 37 7 158451051 158451051 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_017760.5 -1 validated p.A680D 0.958 36 0% 46 34.8% 13 0% possibly_damaging(0.926) deleterious(0.03) deleterious(0.739) superfamily_ARM repeat CLN8 2055 genome.wustl.edu 37 8 1728601 1728601 + Silent SNP A A T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_018941.3 +1 reviewed p.L243 0.000 120 0% 95 38.9% 6 0% - - - HMMPfam_TRAM_LAG1_CLN8,HMMSmart_TLC DEFB104A 140596 genome.wustl.edu 37 8 7698697 7698697 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_080389.2 +1 reviewed p.L67P 0.001 211 0% 301 15.3% 0 - probably_damaging(0.956) tolerated(0.07) deleterious(0.719) NULL RP1L1 94137 genome.wustl.edu 37 8 10469811 10469811 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_178857.5 -1 validated p.E599 0.014 45 0% 28 42.9% 0 - - - - NULL PIWIL2 55124 genome.wustl.edu 37 8 22173836 22173836 + Missense_Mutation SNP A A C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001135721.1 +1 validated p.S763R 1.000 102 0% 111 34.2% 0 - probably_damaging(0.982) deleterious(0) deleterious(0.871) HMMPfam_Piwi,superfamily_Ribonuclease H-like EPHX2 2053 genome.wustl.edu 37 8 27369368 27369368 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001979.4 +1 reviewed p.A226T 0.000 90 0% 89 39.3% 10 0% benign(0) tolerated(0.55) neutral(0.007) NULL CA8 767 genome.wustl.edu 37 8 61135315 61135315 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_004056.4 -1 reviewed p.L211M 1.000 86 0% 76 39.5% 16 0% benign(0.404) tolerated(0.07) neutral(0.449) HMMPfam_Carb_anhydrase,superfamily_Carbonic anhydrase ZFHX4 79776 genome.wustl.edu 37 8 77618103 77618103 + Missense_Mutation SNP A A T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_024721.4 +1 validated p.T594S 0.994 74 0% 75 33.3% 0 - benign(0.076) - - NULL ZFHX4 79776 genome.wustl.edu 37 8 77766549 77766549 + Silent SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_024721.4 +1 validated p.S2419 0.626 81 1.2% 111 30.6% 0 - - - - NULL PDP1 54704 genome.wustl.edu 37 8 94934860 94934860 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_018444.3 +1 reviewed p.Q191 1.000 104 0% 92 29.3% 10 0% - - - HMMSmart_SM00332,superfamily_Protein serine/threonine phosphatase 2C catalytic domain GDF6 392255 genome.wustl.edu 37 8 97172579 97172579 + Silent SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001001557.2 -1 reviewed p.N114 0.998 166 0% 56 10.7% 0 - - - - HMMPfam_TGFb_propeptide LRP12 29967 genome.wustl.edu 37 8 105503226 105503226 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_013437.4 -1 reviewed p.Q752R 1.000 156 0% 192 42.7% 7 0% benign(0.019) tolerated(0.24) neutral(0.038) NULL PKHD1L1 93035 genome.wustl.edu 37 8 110497366 110497366 + Missense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_177531.4 +1 validated p.L3224I 1.000 90 0% 103 39.8% 0 - benign(0.03) tolerated(0.3) neutral(0.030) superfamily_Pectin lyase-like CSMD3 114788 genome.wustl.edu 37 8 113649138 113649138 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_198123.1 -1 validated p.C1208Y 1.000 97 1% 103 42.7% 0 - possibly_damaging(0.928) deleterious(0) deleterious(0.820) HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain DSCC1 79075 genome.wustl.edu 37 8 120855866 120855866 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_024094.2 -1 validated p.L233 1.000 268 0% 269 33.8% 12 0% - - - HMMPfam_DUF2036 ZHX2 22882 genome.wustl.edu 37 8 123963864 123963864 + Silent SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014943.3 +1 reviewed p.P38 0.323 65 0% 102 35.3% 3 0% - - - NULL FBXO32 114907 genome.wustl.edu 37 8 124526529 124526529 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_058229.2 -1 reviewed p.G139 1.000 50 0% 47 25.5% 7 0% - - - NULL RNF139 11236 genome.wustl.edu 37 8 125499280 125499280 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_007218.3 +1 reviewed p.V464F 1.000 234 0.4% 364 37.1% 45 0% probably_damaging(0.997) deleterious(0) deleterious(0.911) NULL SLC45A4 57210 genome.wustl.edu 37 8 142238287 142238287 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001080431.1 -1 provisional p.L27F 0.002 118 0% 96 30.2% 0 - possibly_damaging(0.779) deleterious(0.01) deleterious(0.697) HMMPfam_MFS_1 SMARCA2 6595 genome.wustl.edu 37 9 2060957 2060958 + In_Frame_Ins INS - - AGA novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_003070.3 +1 reviewed p.559in_frame_insK 1.000:1.000 - - - - - - - - - NULL INSL6 11172 genome.wustl.edu 37 9 5185468 5185468 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_007179.2 -1 reviewed p.C45 0.961 122 0% 124 39.5% 0 - - - - HMMPfam_Insulin,HMMSmart_IlGF,superfamily_Insulin-like PSIP1 11168 genome.wustl.edu 37 9 15474202 15474202 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001128217.1 -1 validated p.G221 1.000 411 0% 477 33.1% 32 0% - - - NULL KIAA1797 54914 genome.wustl.edu 37 9 20953055 20953055 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_017794.3 +1 validated p.G1375R 1.000 83 0% 78 43.6% 10 0% probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_ARM-type_fold IL11RA 3590 genome.wustl.edu 37 9 34657108 34657108 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001142784.1 +1 reviewed p.Q136 1.000 145 0% 118 39% 5 0% - - - HMMSmart_SM00060,superfamily_Fibronectin type III GNE 10020 genome.wustl.edu 37 9 36246114 36246114 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001128227.1 -1 reviewed p.R208H 1.000 100 0% 123 33.3% 6 0% possibly_damaging(0.515) tolerated(0.12) neutral(0.434) HMMPfam_Epimerase_2,superfamily_SSF53756 ZCCHC7 84186 genome.wustl.edu 37 9 37357264 37357264 + Silent SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_032226.2 +1 validated p.*544 0.003 72 0% 81 44.4% 48 0% - - - NULL ZNF658 26149 genome.wustl.edu 37 9 40773862 40773862 + Silent SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_033160.5 -1 validated p.N471 0.000 322 0% 298 24.5% 0 - - - - NULL ANKRD20A4 728747 genome.wustl.edu 37 9 69423453 69423453 + Silent SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001098805.1 +1 provisional p.A583 0.940 328 0% 352 9.7% 0 - - - - NULL TDRD7 23424 genome.wustl.edu 37 9 100258092 100258092 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014290.2 +1 validated p.S1075L 0.983 156 0% 150 36% 30 0% probably_damaging(0.997) deleterious(0) deleterious(0.911) NULL TBC1D2 55357 genome.wustl.edu 37 9 100971400 100971400 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_018421.3 -1 validated p.T567M 0.986 327 0% 478 40.4% 17 0% possibly_damaging(0.911) tolerated(0.22) neutral(0.405) NULL SMC2 10592 genome.wustl.edu 37 9 106878527 106878527 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001042550.1 +1 validated p.Y573C 1.000 55 0% 68 17.6% 12 0% benign(0.012) deleterious(0.03) neutral(0.365) HMMPfam_SMC_N,HMMPfam_SMC_hinge,superfamily_Smc hinge domain,superfamily_P-loop containing nucleoside triphosphate hydrolases MUSK 4593 genome.wustl.edu 37 9 113562662 113562662 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_005592.3 +1 reviewed p.R668 0.988 203 0% 209 36.4% 0 - - - - HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like) PTBP3 9991 genome.wustl.edu 37 9 114994471 114994471 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_005156.5 -1 validated p.T338A 0.987 95 0% 123 22% 10 0% benign(0.001) tolerated(1) - NULL RGS3 5998 genome.wustl.edu 37 9 116303634 116303634 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_017790.3 +1 reviewed p.M579T 1.000 247 0% 207 35.7% 1 0% possibly_damaging(0.812) deleterious(0) deleterious(0.750) NULL PBX3 5090 genome.wustl.edu 37 9 128723085 128723085 + Silent SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_006195.5 +1 validated p.A322 0.872 31 0% 36 13.9% 0 - - - - NULL ODF2 4957 genome.wustl.edu 37 9 131221915 131221915 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_153437.1 +1 reviewed p.G34 0.983 35 0% 28 32.1% 30 0% - - - NULL QSOX2 169714 genome.wustl.edu 37 9 139100733 139100733 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_181701.3 -1 validated p.G646 0.000 36 0% 22 36.4% 9 0% - - - NULL PFKP 5214 genome.wustl.edu 37 10 3143745 3143745 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_002627.3 +1 validated p.N151 0.000 5 0.000 9 0.556 97 0% - - - HMMPfam_PFK,superfamily_Phosphofructokinase SFMBT2 57713 genome.wustl.edu 37 10 7214543 7214543 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001029880.1 -1 provisional p.A689T 0.709 34 0% 23 39.1% 0 - benign(0.001) tolerated(0.95) - NULL SFMBT2 57713 genome.wustl.edu 37 10 7290596 7290596 + Nonsense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001029880.1 -1 provisional p.R296* 0.996 59 0% 86 36% 0 - - - - HMMSmart_SM00561,superfamily_Tudor/PWWP/MBT MYO3A 53904 genome.wustl.edu 37 10 26409674 26409674 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_017433.4 +1 reviewed p.A616T 1.000 103 0% 114 22.8% 0 - benign(0.027) tolerated(0.45) neutral(0.013) HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540 ZNF438 220929 genome.wustl.edu 37 10 31139023 31139023 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001143766.1 -1 validated p.Q104R 1.000 189 0% 145 37.2% 4 0% probably_damaging(1) deleterious(0) deleterious(0.945) NULL EPC1 80314 genome.wustl.edu 37 10 32573762 32573762 + Silent SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_025209.2 -1 provisional p.L536 1.000 131 0% 147 33.3% 13 0% - - - NULL NRP1 8829 genome.wustl.edu 37 10 33495156 33495156 + Missense_Mutation SNP A A C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000374816 -1 known p.S629A 0.001 93 0% 69 34.8% 0 - unknown(0) - - NULL CUL2 8453 genome.wustl.edu 37 10 35324169 35324169 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_003591.2 -1 provisional p.M311I 1.000 69 0% 64 28.1% 23 0% benign(0.311) deleterious(0.03) neutral(0.462) HMMPfam_Cullin,superfamily_Cullin repeat ZNF33A 7581 genome.wustl.edu 37 10 38353016 38353016 + Missense_Mutation SNP G G C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000277672 +1 known p.A130P 0.230 146 0% 150 40% 11 0% benign(0.011) tolerated(0.11) neutral(0.272) NULL MAPK8 5599 genome.wustl.edu 37 10 49628295 49628295 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_139047.1 +1 reviewed p.T183M 1.000 114 0% 126 40.5% 11 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase PARG 8505 genome.wustl.edu 37 10 51130651 51130651 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_003631.2 -1 reviewed p.D507G 1.000 74 0% 65 38.5% 2 0% probably_damaging(1) deleterious(0.02) deleterious(0.883) NULL TET1 80312 genome.wustl.edu 37 10 70404893 70404893 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_030625.2 +1 validated p.A803T 0.997 257 0% 229 38.9% 0 - benign(0.107) deleterious(0) neutral(0.453) NULL NPFFR1 64106 genome.wustl.edu 37 10 72025953 72025953 + Missense_Mutation SNP C C T rs188869837 by1000genomes TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000277942 -1 known p.V68M 0.998 130 0% 155 36.8% 0 - probably_damaging(0.999) deleterious(0.02) deleterious(0.873) HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like DDIT4 54541 genome.wustl.edu 37 10 74034674 74034674 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_019058.2 +1 validated p.R143W 1.000 23 0% 17 35.3% 518 0.1% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_RTP801_C NDST2 8509 genome.wustl.edu 37 10 75567302 75567302 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_003635.3 -1 reviewed p.H282R 1.000 61 0% 58 22.4% 4 0% benign(0.025) tolerated(0.45) neutral(0.013) NULL MAT1A 4143 genome.wustl.edu 37 10 82043759 82043760 + Frame_Shift_Del DEL CA CA - novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 CA CA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_000429.2 -1 reviewed p.C68fs 1.000:0.995 - - - - - - - - - HMMPfam_S-AdoMet_synt_N,superfamily_S-AdoMet_synt PTEN 5728 genome.wustl.edu 37 10 89720823 89720823 + Missense_Mutation SNP T T G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000371953 +1 known p.L325R 1.000 210 0% 277 40.8% 187 0% benign(0.011) deleterious(0.03) neutral(0.365) superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_PTEN_C2 IDE 3416 genome.wustl.edu 37 10 94216151 94216151 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_004969.3 -1 reviewed p.V954A 0.994 116 0% 130 29.2% 43 0% possibly_damaging(0.63) deleterious(0.01) deleterious(0.626) superfamily_Metalloenz_metal-bd PLCE1 51196 genome.wustl.edu 37 10 96025410 96025410 + Nonsense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_016341.3 +1 reviewed p.E1354* 1.000 214 0% 198 31.8% 5 0% - - - HMMPfam_efhand_like,superfamily_EF-hand ZNF518A 9849 genome.wustl.edu 37 10 97919538 97919538 + Silent SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000371192 +1 known p.N1153 1.000 155 0% 174 32.8% 18 0% - - - NULL TLL2 7093 genome.wustl.edu 37 10 98192576 98192576 + Missense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_012465.3 -1 validated p.G170W 1.000 73 0% 138 38.4% 2 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Astacin,HMMSmart_ZnMc,superfamily_SSF55486 PSD 5662 genome.wustl.edu 37 10 104164484 104164484 + Silent SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_002779.3 -1 provisional p.P852 1.000 116 0% 45 37.8% 11 0% - - - HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like C10orf81 79949 genome.wustl.edu 37 10 115540501 115540501 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000369312 +1 known p.P354 0.047 72 0% 52 40.4% 7 0% - - - NULL ATRNL1 26033 genome.wustl.edu 37 10 116889252 116889252 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_207303.2 +1 validated p.D262Y 1.000 117 0% 133 34.6% 0 - possibly_damaging(0.78) deleterious(0.02) deleterious(0.674) HMMPfam_EGF_2,superfamily_EGF/Laminin GRK5 2869 genome.wustl.edu 37 10 121182725 121182727 + In_Frame_Del DEL GGA GGA - novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 GGA GGA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_005308.2 +1 reviewed p.E131in_frame_del 0.859:0.998:1.000 - - - - - - - - - HMMPfam_RGS,HMMSmart_RGS,superfamily_Regulat_G_prot_signal_superfam MCMBP 79892 genome.wustl.edu 37 10 121595125 121595125 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_024834.2 -1 validated p.V547A 0.987 120 0.8% 205 36.1% 76 0% benign(0.021) tolerated(0.51) neutral(0.010) HMMPfam_DUF2044 FGFR2 2263 genome.wustl.edu 37 10 123247516 123247516 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_022970.3 -1 reviewed p.K660E 1.000 215 0% 266 38.3% 47 0% probably_damaging(0.967) deleterious(0) deleterious(0.853) HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like KNDC1 85442 genome.wustl.edu 37 10 134997385 134997385 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_152643.6 +1 validated p.A173T 0.063 14 0% 29 55.2% 0 - possibly_damaging(0.93) tolerated(0.28) neutral(0.408) HMMSmart_SM00750 PAOX 196743 genome.wustl.edu 37 10 135204850 135204850 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_152911.2 +1 validated p.R476H 0.920 31 0% 29 31% 26 0% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_Amino_oxidase,superfamily_FAD/NAD(P)-binding domain CDHR5 53841 genome.wustl.edu 37 11 618996 618996 + Silent SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_021924.4 -1 reviewed p.P521 0.006 10 0.000 8 0.625 0 - - - - NULL CCKBR 887 genome.wustl.edu 37 11 6292315 6292315 + Nonsense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_176875.2 +1 reviewed p.Q296* 1.000 46 0% 58 48.3% 0 - - - - HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like DCHS1 8642 genome.wustl.edu 37 11 6655487 6655487 + Silent SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_003737.2 -1 reviewed p.S616 0.996 135 0.7% 151 40.4% 2 0% - - - HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin DENND5A 23258 genome.wustl.edu 37 11 9215039 9215040 + Splice_Site DEL CA CA - novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 CA CA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_015213.2 -1 validated e5+2 1.000 - - - - - - - - - - MICALCL 84953 genome.wustl.edu 37 11 12315536 12315536 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_032867.2 +1 validated p.E186 0.998 151 0% 143 22.4% 0 - - - - NULL NAV2 89797 genome.wustl.edu 37 11 20122629 20122629 + Silent SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_182964.5 +1 validated p.R2113 1.000 157 0% 155 43.2% 15 0% - - - HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases SLC35C1 55343 genome.wustl.edu 37 11 45827532 45827532 + Missense_Mutation SNP G G C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_018389.4 +1 reviewed p.K60N 0.997 54 0% 30 46.7% 23 0% possibly_damaging(0.68) tolerated(0.08) deleterious(0.542) NULL AMBRA1 55626 genome.wustl.edu 37 11 46564217 46564218 + Frame_Shift_Del DEL CA CA - novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 CA CA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_017749.2 -1 validated p.V360fs 1.000:1.000 - - - - - - - - - NULL NUP160 23279 genome.wustl.edu 37 11 47834490 47834490 + Silent SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_015231.1 -1 validated p.L632 0.755 86 0% 83 32.5% 4 0% - - - NULL OR5M3 219482 genome.wustl.edu 37 11 56237751 56237751 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001004742.1 -1 provisional p.V75I 0.004 244 0% 245 32.2% 0 - benign(0.09) tolerated(0.77) neutral(0.007) HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like SERPING1 710 genome.wustl.edu 37 11 57367623 57367623 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_000062.2 +1 reviewed p.Q108R 0.003 162 0% 174 33.3% 71 0% benign(0.004) tolerated(0.26) neutral(0.034) superfamily_Prot_inh_serpin OR5B21 219968 genome.wustl.edu 37 11 58274977 58274977 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001005218.1 -1 provisional p.G201D 0.001 204 0% 213 39% 0 - possibly_damaging(0.507) deleterious(0) deleterious(0.614) HMMPfam_7tm_1,superfamily_SSF81321 DDB1 1642 genome.wustl.edu 37 11 61079299 61079299 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001923.3 -1 validated p.T745M 0.913 77 0% 109 26.6% 114 0% benign(0.094) tolerated(0.06) neutral(0.330) NULL MTA2 9219 genome.wustl.edu 37 11 62366046 62366046 + Silent SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_004739.2 -1 reviewed p.R86 1.000 217 0% 246 36.6% 60 0% - - - HMMPfam_BAH,HMMSmart_BAH ZBTB3 79842 genome.wustl.edu 37 11 62521013 62521013 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_024784.3 -1 validated p.L92 1.000 68 0% 94 29.8% 2 0% - - - HMMSmart_BTB,superfamily_BTB/POZ_fold,HMMPfam_BTB CABP2 51475 genome.wustl.edu 37 11 67288511 67288511 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_016366.2 -1 reviewed p.I122V 1.000 36 0% 58 37.9% 0 - benign(0.091) tolerated(0.09) neutral(0.303) superfamily_EF-hand C11orf51 25906 genome.wustl.edu 37 11 71820956 71820956 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014042.2 -1 validated p.E113K 1.000 82 0% 84 40.5% 319 0% benign(0.019) tolerated(0.1) neutral(0.287) NULL LRRC32 2615 genome.wustl.edu 37 11 76371946 76371946 + Missense_Mutation SNP C C G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001128922.1 -1 reviewed p.E231Q 0.985 67 0% 71 52.1% 1 0% probably_damaging(0.995) tolerated(0.06) deleterious(0.780) superfamily_SSF52058 SYTL2 54843 genome.wustl.edu 37 11 85435402 85435402 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_206927.2 -1 reviewed p.L700I 0.001 177 1.1% 185 40% 0 - benign(0.076) deleterious(0.01) neutral(0.411) NULL FAT3 120114 genome.wustl.edu 37 11 92495338 92495338 + Splice_Site SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001008781.2 +1 validated e4+2 1.000 292 0% 313 37.4% 0 - - - - - FAT3 120114 genome.wustl.edu 37 11 92600034 92600034 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001008781.2 +1 validated p.T3929M 0.999 15 0% 21 76.2% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2 KBTBD3 143879 genome.wustl.edu 37 11 105924879 105924879 + Silent SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_152433.3 -1 validated p.H179 0.961 45 0% 68 36.8% 0 - - - - HMMPfam_BACK ATM 472 genome.wustl.edu 37 11 108198485 108198485 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_000051.3 +1 reviewed p.K2363N 1.000 69 0% 94 53.2% 1 0% benign(0.161) deleterious(0.01) neutral(0.420) HMMPfam_FAT,superfamily_ARM repeat DLAT 1737 genome.wustl.edu 37 11 111931874 111931874 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001931.4 +1 reviewed p.L597P 1.000 38 0% 51 35.3% 30 0% probably_damaging(0.985) tolerated(0.06) deleterious(0.754) HMMPfam_2-oxoacid_dh,superfamily_CoA-dependent acyltransferases APOA4 337 genome.wustl.edu 37 11 116691982 116691982 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_000482.3 -1 reviewed p.R264 0.854 69 0% 54 29.6% 0 - - - - HMMPfam_Apolipoprotein,superfamily_Apolipoprotein SIDT2 51092 genome.wustl.edu 37 11 117063566 117063566 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001040455.1 +1 validated p.V697I 1.000 41 0% 21 42.9% 9 0% benign(0) tolerated(0.68) neutral(0.002) NULL HYOU1 10525 genome.wustl.edu 37 11 118917500 118917500 + Silent SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001130991.1 -1 reviewed p.A870 0.952 71 0% 106 34% 121 0.8% - - - superfamily_Heat shock protein 70kD (HSP70) C-terminal subdomain ZNF202 7753 genome.wustl.edu 37 11 123597565 123597565 + Missense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_003455.2 -1 validated p.G363C 0.011 300 0% 304 39.1% 6 0% possibly_damaging(0.792) tolerated(0.07) deleterious(0.616) NULL DCPS 28960 genome.wustl.edu 37 11 126215349 126215349 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014026.3 +1 validated p.F285 1.000 59 1.7% 40 45% 121 0% - - - HMMPfam_DcpS,superfamily_His_triad-like_motif IGSF9B 22997 genome.wustl.edu 37 11 133791240 133791240 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014987.1 -1 validated p.S794P 0.407 22 0% 25 32% 1 0% probably_damaging(0.989) deleterious(0) deleterious(0.884) NULL CD4 920 genome.wustl.edu 37 12 6927593 6927593 + Missense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_000616.3 +1 validated p.P388H 0.002 58 0% 82 17.1% 16 0% probably_damaging(0.978) deleterious(0) deleterious(0.865) HMMPfam_C2-set,superfamily_Immunoglobulin CLSTN3 9746 genome.wustl.edu 37 12 7295488 7295488 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014718.3 +1 validated p.Y522H 1.000 117 0% 149 36.2% 48 0% probably_damaging(0.975) tolerated(0.48) neutral(0.427) superfamily_ConA_like_lec_gl CD163L1 283316 genome.wustl.edu 37 12 7521563 7521564 + Splice_Site INS - - GA novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_174941.4 -1 reviewed e16-2 0.067:0.055 - - - - - - - - - - DDX47 51202 genome.wustl.edu 37 12 12975666 12975666 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_016355.3 +1 reviewed p.K211N 1.000 207 0% 229 31% 49 0% possibly_damaging(0.824) tolerated(0.08) deleterious(0.612) HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases PLBD1 79887 genome.wustl.edu 37 12 14706300 14706300 + Silent SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_024829.5 -1 validated p.V54 0.000 82 0% 113 37.2% 1 0% - - - HMMPfam_Phospholip_B EPS8 2059 genome.wustl.edu 37 12 15803867 15803867 + Missense_Mutation SNP G G C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_004447.5 -1 reviewed p.L442V 1.000 198 0% 272 33.8% 14 0% benign(0.167) tolerated(0.35) neutral(0.036) NULL RERGL 79785 genome.wustl.edu 37 12 18242163 18242163 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_024730.2 -1 provisional p.A19T 0.000 36 0% 49 36.7% 0 - benign(0.226) deleterious(0) neutral(0.467) superfamily_SSF52540 C12orf71 728858 genome.wustl.edu 37 12 27235212 27235212 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001080406.1 -1 inferred p.R69C 0.013 131 0% 135 39.3% 0 - benign(0) deleterious(0.03) neutral(0.364) NULL PDZRN4 29951 genome.wustl.edu 37 12 41967685 41967685 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_013377.3 +1 validated p.T777I 1.000 106 0% 110 41.8% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) NULL PRICKLE1 144165 genome.wustl.edu 37 12 42853801 42853803 + In_Frame_Del DEL GAG GAG - novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 GAG GAG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001144881.1 -1 reviewed p.S770in_frame_del 1.000:1.000:0.997 - - - - - - - - - NULL PRICKLE1 144165 genome.wustl.edu 37 12 42863294 42863294 + Silent SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001144881.1 -1 reviewed p.I114 0.137 77 0% 84 28.6% 3 0% - - - HMMPfam_PET DIP2B 57609 genome.wustl.edu 37 12 51117073 51117073 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_173602.2 +1 validated p.T1085 0.000 55 0% 83 41% 5 0% - - - HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like SLC11A2 4891 genome.wustl.edu 37 12 51390719 51390719 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_000617.2 -1 reviewed p.K238E 1.000 90 0% 77 29.9% 11 0% benign(0.001) tolerated(0.51) neutral(0.009) HMMPfam_Nramp EIF4B 1975 genome.wustl.edu 37 12 53421677 53421677 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001417.4 +1 validated p.D260G 1.000 124 0% 136 38.2% 155 0% unknown(0) tolerated(0.08) - superfamily_SSF54928 SPRYD3 84926 genome.wustl.edu 37 12 53460214 53460214 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_032840.2 -1 validated p.R360W 0.843 48 0% 60 40% 32 0% probably_damaging(0.997) deleterious(0) deleterious(0.911) HMMSmart_SM00449 NACA 4666 genome.wustl.edu 37 12 57113329 57113329 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001113203.1 -1 validated p.T662N 0.605 36 0% 39 35.9% 4 0% unknown(0) tolerated(0.09) - NULL SDR9C7 121214 genome.wustl.edu 37 12 57324171 57324171 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_148897.2 -1 reviewed p.N133 1.000 108 0% 95 40% 0 - - - - HMMPfam_adh_short,superfamily_NAD(P)-bd KIF5A 3798 genome.wustl.edu 37 12 57971529 57971529 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_004984.2 +1 reviewed p.Q778H 1.000 119 0% 155 38.7% 0 - probably_damaging(0.981) deleterious(0.02) deleterious(0.808) superfamily_Prefoldin MON2 23041 genome.wustl.edu 37 12 62940761 62940761 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_015026.2 +1 validated p.V888M 1.000 46 0% 44 34.1% 6 0% possibly_damaging(0.871) tolerated(0.07) deleterious(0.657) HMMPfam_DUF1981,superfamily_ARM-type_fold SLC35E3 55508 genome.wustl.edu 37 12 69140386 69140388 + In_Frame_Del DEL CTC CTC - novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 CTC CTC Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_018656.2 +1 validated p.L80in_frame_del 0.934:0.979:0.941 - - - - - - - - - NULL FRS2 10818 genome.wustl.edu 37 12 69965990 69965990 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001042555.1 +1 validated p.S169P 1.000 76 0% 131 42.7% 10 0% probably_damaging(0.998) deleterious(0.02) deleterious(0.857) NULL ZFC3H1 196441 genome.wustl.edu 37 12 72021565 72021565 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_144982.4 -1 validated p.K1366E 1.000 71 0% 76 28.9% 0 - probably_damaging(0.998) tolerated(0.13) deleterious(0.727) superfamily_Protein prenylyltransferase CDK17 5128 genome.wustl.edu 37 12 96704853 96704853 + Nonsense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_002595.3 -1 reviewed p.R174* 1.000 166 0% 194 42.3% 3 0% - - - NULL APAF1 317 genome.wustl.edu 37 12 99117070 99117070 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_181861.1 +1 reviewed p.S1062P 1.000 125 0% 132 31.8% 3 0% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40 UHRF1BP1L 23074 genome.wustl.edu 37 12 100451403 100451403 + Nonsense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_015054.1 -1 validated p.E1124* 1.000 87 0% 98 26.5% 6 0% - - - NULL C12orf23 90488 genome.wustl.edu 37 12 107365082 107365082 + Silent SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_152261.2 +1 validated p.S88 1.000 171 0% 162 40.1% 40 0% - - - NULL C12orf51 283450 genome.wustl.edu 37 12 112703077 112703077 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001109662.2 -1 validated p.Y409H 1.000 81 0% 96 33.3% 0 - probably_damaging(0.983) - - NULL TESC 54997 genome.wustl.edu 37 12 117494618 117494618 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_017899.3 -1 validated p.D121N 1.000 29 0% 27 37% 54 0% probably_damaging(1) tolerated(0.14) deleterious(0.750) superfamily_EF-hand NOS1 4842 genome.wustl.edu 37 12 117662909 117662909 + Silent SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_000620.2 -1 reviewed p.Q1246 1.000 73 0% 66 36.4% 0 - - - - superfamily_Ferredoxin reductase-like C-terminal NADP-linked domain HPD 3242 genome.wustl.edu 37 12 122281717 122281718 + Frame_Shift_Del DEL CT CT - rs142252243 by1000genomes TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 CT CT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_002150.2 -1 reviewed p.G285fs 1.000:0.977 - - - - - - - - - HMMPfam_Glyoxalase,superfamily_Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase WDR66 144406 genome.wustl.edu 37 12 122405989 122405989 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_144668.4 +1 validated p.A895 0.017 19 0% 35 28.6% 20 0% - - - HMMSmart_SM00320,superfamily_WD40 repeat-like SACS 26278 genome.wustl.edu 37 13 23905768 23905768 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014363.4 -1 reviewed p.V4083I 0.999 127 0% 122 40.2% 5 0% possibly_damaging(0.9) tolerated(0.75) neutral(0.358) NULL SACS 26278 genome.wustl.edu 37 13 23908764 23908764 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014363.4 -1 reviewed p.I3084T 0.980 86 1.2% 100 27% 1 0% benign(0) tolerated(0.53) neutral(0.007) NULL TNFRSF19 55504 genome.wustl.edu 37 13 24190168 24190168 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_018647.2 +1 reviewed p.G115R 1.000 93 0% 58 37.9% 2 0% probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_TNF receptor-like INTS6 26512 genome.wustl.edu 37 13 51941946 51941946 + Silent SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_012141.2 -1 reviewed p.A855 0.988 57 0% 61 32.8% 35 0% - - - NULL DIAPH3 81624 genome.wustl.edu 37 13 60582729 60582729 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001042517.1 -1 validated p.D321 1.000 186 0.5% 215 36.7% 5 0% - - - HMMPfam_Drf_FH3 DIS3 22894 genome.wustl.edu 37 13 73346014 73346014 + Silent SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014953.3 -1 validated p.D508 1.000 134 0% 165 40.6% 6 0% - - - HMMPfam_RNB TUBGCP3 10426 genome.wustl.edu 37 13 113200145 113200145 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_006322.4 -1 provisional p.H401 0.878 160 0% 140 34.3% 10 0% - - - HMMPfam_Spc97_Spc98 RPGRIP1 57096 genome.wustl.edu 37 14 21793122 21793122 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_020366.3 +1 reviewed p.I703T 0.758 149 0% 280 24.6% 0 - benign(0.002) deleterious(0.02) neutral(0.383) NULL SUPT16H 11198 genome.wustl.edu 37 14 21830374 21830374 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_007192.3 -1 reviewed p.A592V 1.000 44 0% 79 17.7% 43 0% probably_damaging(0.968) deleterious(0.01) deleterious(0.816) HMMPfam_SPT16 HOMEZ 57594 genome.wustl.edu 37 14 23745163 23745163 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_020834.2 -1 validated p.P425H 1.000 48 0% 61 55.7% 56 0% possibly_damaging(0.952) tolerated(0.22) neutral(0.438) superfamily_Homeodomain-like AP1G2 8906 genome.wustl.edu 37 14 24033799 24033799 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_003917.2 -1 reviewed p.M298T 1.000 112 0% 97 24.7% 28 0% benign(0.191) deleterious(0) neutral(0.463) HMMPfam_Adaptin_N,superfamily_ARM-type_fold SSTR1 6751 genome.wustl.edu 37 14 38679663 38679663 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001049.2 +1 reviewed p.A357T 0.999 49 2% 87 52.9% 0 - probably_damaging(0.999) deleterious(0.01) deleterious(0.896) NULL FAM179B 23116 genome.wustl.edu 37 14 45431996 45431996 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_015091.2 +1 validated p.G124 1.000 52 0% 76 25% 1 0% - - - NULL TXNDC16 57544 genome.wustl.edu 37 14 52899168 52899168 + Nonsense_Mutation SNP T T A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_020784.2 -1 validated p.K778* 0.001 103 0% 180 18.9% 4 0% - - - NULL SLC35F4 341880 genome.wustl.edu 37 14 58030886 58030886 + Silent SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001080455.1 -1 provisional p.R511 0.997 96 0% 159 11.3% 0 - - - - NULL ARID4A 5926 genome.wustl.edu 37 14 58832863 58832863 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_002892.3 +1 reviewed p.P1146 0.998 298 0.7% 545 26.2% 7 0% - - - NULL DACT1 51339 genome.wustl.edu 37 14 59113012 59113012 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_016651.5 +1 validated p.A557 0.889 70 0% 95 53.7% 3 0% - - - NULL SIX4 51804 genome.wustl.edu 37 14 61186821 61186821 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_017420.4 -1 reviewed p.S402 1.000 86 0% 151 21.9% 5 0% - - - NULL SYNE2 23224 genome.wustl.edu 37 14 64634341 64634341 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_182914.2 +1 reviewed p.Q5630R 1.000 91 0% 111 21.6% 3 0% probably_damaging(0.99) deleterious(0) deleterious(0.886) HMMSmart_SPEC,superfamily_Spectrin ABCD4 5826 genome.wustl.edu 37 14 74759863 74759863 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_005050.3 -1 reviewed p.L270 1.000 62 0% 99 21.2% 16 0% unknown(0) - - HMMPfam_ABC_membrane_2,superfamily_ABC_TM_1 SNW1 22938 genome.wustl.edu 37 14 78205307 78205307 + Splice_Site SNP A A T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_012245.2 -1 reviewed e4+2 1.000 339 0% 687 26.6% 0 - - - - - CEP128 145508 genome.wustl.edu 37 14 81259318 81259318 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_152446.3 -1 validated p.R449H 0.688 169 0% 304 29.6% 2 0% probably_damaging(0.994) tolerated(0.2) deleterious(0.501) NULL EML5 161436 genome.wustl.edu 37 14 89154750 89154750 + Silent SNP T T A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_183387.2 -1 validated p.A869 0.944 398 0% 687 28.7% 0 - - - - superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase RIN3 79890 genome.wustl.edu 37 14 93119291 93119291 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_024832.3 +1 validated p.R633C 0.570 32 0% 28 57.1% 6 0% benign(0.079) tolerated(0.17) neutral(0.065) superfamily_VPS9 domain (Pfam 02204) UNC79 57578 genome.wustl.edu 37 14 94088426 94088426 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_020818.3 +1 validated p.S1439L 0.998 323 0% 459 25.3% 0 - probably_damaging(0.99) deleterious(0) deleterious(0.886) NULL SERPINA6 866 genome.wustl.edu 37 14 94772437 94772437 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001756.3 -1 reviewed p.T335A 0.004 88 0% 138 44.2% 18 0% possibly_damaging(0.662) deleterious(0.01) deleterious(0.640) HMMPfam_Serpin,HMMSmart_SM00093,superfamily_Serpins SERPINA11 256394 genome.wustl.edu 37 14 94909115 94909115 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001080451.1 -1 provisional p.E366G 1.000 44 0% 79 54.4% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_Serpin,HMMSmart_SERPIN,superfamily_Prot_inh_serpin SERPINA3 12 genome.wustl.edu 37 14 95085640 95085640 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001085.4 +1 reviewed p.I251T 0.000 52 0% 71 56.3% 49 0% benign(0) tolerated(1) - HMMPfam_Serpin,HMMSmart_SM00093,superfamily_Serpins AK7 122481 genome.wustl.edu 37 14 96871121 96871121 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_152327.2 +1 validated p.R108C 0.016 63 0% 68 25% 1 0% benign(0.006) tolerated(0.07) neutral(0.319) superfamily_NAD(P)-binding Rossmann-fold domains CDCA4 55038 genome.wustl.edu 37 14 105478029 105478029 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_017955.3 -1 reviewed p.R80C 0.999 44 0% 46 34.8% 29 0% benign(0.007) deleterious(0.01) neutral(0.406) NULL IGHM 3507 genome.wustl.edu 37 14 106321885 106321885 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000496208 -1 known p.V116I 0.035 59 0% 66 22.7% 75 0% benign(0.004) tolerated(0.9) - superfamily_Immunoglobulin LOC729722 729722 genome.wustl.edu 37 15 20093065 20093065 + Silent SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 XM_001716538.2 +1 model p.P268 0.045 22 0% 38 26.3% 0 - - - - NULL MAGEL2 54551 genome.wustl.edu 37 15 23890124 23890124 + Missense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_019066.4 -1 reviewed p.W319C 0.998 40 0% 26 34.6% 0 - probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL GPR176 11245 genome.wustl.edu 37 15 40093543 40093543 + Silent SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_007223.1 -1 provisional p.P446 0.646 144 0% 118 34.7% 1 0% - - - NULL BUB1B 701 genome.wustl.edu 37 15 40502387 40502388 + Frame_Shift_Del DEL CT CT - novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 CT CT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001211.5 +1 reviewed p.S788fs 1.000:1.000 - - - - - - - - - superfamily_Protein kinase-like (PK-like) GCHFR 2644 genome.wustl.edu 37 15 41059514 41059514 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_005258.2 +1 reviewed p.G74 1.000 19 0% 24 50% 130 0% - - - HMMPfam_GFRP,superfamily_GTP cyclohydrolase I feedback regulatory protein GFRP MGA 23269 genome.wustl.edu 37 15 42005421 42005421 + Nonsense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001080541.2 +1 validated p.R1053* 1.000 99 0% 162 38.9% 0 - - - - NULL MGA 23269 genome.wustl.edu 37 15 42052628 42052628 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001080541.2 +1 validated p.R2482 0.958 134 0% 193 23.3% 1 0% - - - HMMPfam_HLH,HMMSmart_SM00353,superfamily_HLH helix-loop-helix DNA-binding domain SKOR1 390598 genome.wustl.edu 37 15 68122631 68122631 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001031807.1 +1 provisional p.D793G 1.000 37 0% 25 28% 1 0% possibly_damaging(0.9) deleterious(0.05) deleterious(0.702) NULL CHRNB4 1143 genome.wustl.edu 37 15 78921375 78921375 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_000750.3 -1 validated p.V424 0.981 92 0% 74 40.5% 0 - - - - HMMPfam_Neur_chan_memb,superfamily_Neu_channel_TM CPEB1 64506 genome.wustl.edu 37 15 83222257 83222257 + Nonsense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_030594.3 -1 reviewed p.W341* 1.000 96 0% 95 35.8% 0 - - - - NULL AKAP13 11214 genome.wustl.edu 37 15 86270397 86270397 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_006738.4 +1 reviewed p.P2312L 1.000 133 0.8% 182 26.4% 9 0% possibly_damaging(0.871) deleterious(0) deleterious(0.783) HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729 TTLL13 440307 genome.wustl.edu 37 15 90799117 90799117 + Missense_Mutation SNP A A T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001029964.2 +1 validated p.D183V 1.000 204 0% 261 28.7% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_TTL,superfamily_SSF56059 VPS33B 26276 genome.wustl.edu 37 15 91543024 91543024 + Splice_Site SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_018668.3 -1 reviewed e22-1 1.000 236 0% 353 41.4% 0 - - - - - SLCO3A1 28232 genome.wustl.edu 37 15 92694208 92694208 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_013272.3 +1 validated p.A573T 1.000 74 0% 72 34.7% 2 0% possibly_damaging(0.907) deleterious(0) deleterious(0.805) HMMPfam_OATP,superfamily_MFS general substrate transporter ST8SIA2 8128 genome.wustl.edu 37 15 92988005 92988005 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_006011.3 +1 reviewed p.L230 1.000 29 0% 30 30% 0 - - - - HMMPfam_Glyco_transf_29 AXIN1 8312 genome.wustl.edu 37 16 347072 347072 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_003502.2 -1 reviewed p.R647C 0.829 14 0% 24 45.8% 81 0% probably_damaging(0.997) deleterious(0) deleterious(0.911) NULL ADCY9 115 genome.wustl.edu 37 16 4057425 4057425 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001116.2 -1 reviewed p.S610P 0.591 100 0% 100 18% 0 - probably_damaging(0.983) tolerated(0.28) neutral(0.461) NULL PPL 5493 genome.wustl.edu 37 16 4936042 4936042 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_002705.4 -1 reviewed p.E872K 0.985 72 0% 47 29.8% 0 - possibly_damaging(0.434) tolerated(0.14) neutral(0.391) NULL ENSG00000078328 0 genome.wustl.edu 37 16 7759079 7759079 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000355637 +1 known p.P378L 1.000 127 0% 120 33.3% 0 - unknown(0) deleterious(0) - NULL ABAT 18 genome.wustl.edu 37 16 8862792 8862792 + Missense_Mutation SNP A A C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_000663.4 +1 reviewed p.K260Q 1.000 116 0% 120 38.3% 0 - benign(0) tolerated(0.38) neutral(0.018) HMMPfam_Aminotran_3,superfamily_PyrdxlP-dep_Trfase_major C16orf72 29035 genome.wustl.edu 37 16 9186802 9186802 + Missense_Mutation SNP T T A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014117.2 +1 validated p.L84H 1.000 9 0.000 18 0.333 31 0% probably_damaging(0.973) tolerated(0.21) neutral(0.459) NULL XYLT1 64131 genome.wustl.edu 37 16 17202736 17202736 + Frame_Shift_Del DEL C C - novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_022166.3 -1 reviewed p.G899fs 0.998 - - - - - - - - - NULL SYT17 51760 genome.wustl.edu 37 16 19194992 19194992 + Silent SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_016524.2 +1 validated p.E158 1.000 120 0% 216 30.6% 6 0% - - - NULL ACSM1 116285 genome.wustl.edu 37 16 20634895 20634895 + Splice_Site SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_052956.2 -1 validated e13-1 1.000 187 0% 242 44.2% 0 - - - - - DNAH3 55567 genome.wustl.edu 37 16 20952748 20952748 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_017539.1 -1 provisional p.R3877G 0.821 428 0% 430 33.5% 0 - probably_damaging(0.988) tolerated(0.33) neutral(0.462) HMMPfam_Dynein_heavy TNRC6A 27327 genome.wustl.edu 37 16 24801151 24801151 + Silent SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014494.2 +1 reviewed p.S396 0.999 99 0% 80 32.5% 1 0% - - - NULL ZNF668 79759 genome.wustl.edu 37 16 31072937 31072937 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_024706.4 -1 validated p.V438M 0.000 57 0% 53 32.1% 24 0% probably_damaging(0.989) tolerated(0.27) deleterious(0.473) NULL ADCY7 113 genome.wustl.edu 37 16 50339459 50339459 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001114.3 +1 reviewed p.D547 0.023 55 0% 21 47.6% 8 0% - - - HMMPfam_DUF1053 RPGRIP1L 23322 genome.wustl.edu 37 16 53686654 53686654 + Nonsense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_015272.2 -1 reviewed p.R649* 0.533 109 0% 116 40.5% 0 - - - - HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB) NFATC3 4775 genome.wustl.edu 37 16 68200744 68200744 + Splice_Site SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_173165.1 +1 reviewed e5-2 1.000 66 0% 80 43.8% 0 - - - - - HAS3 3038 genome.wustl.edu 37 16 69143619 69143619 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_005329.2 +1 reviewed p.S107 0.404 25 0% 17 35.3% 3 0% - - - HMMPfam_Glycos_transf_2,superfamily_SSF53448 FUK 197258 genome.wustl.edu 37 16 70503184 70503184 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_145059.2 +1 reviewed p.A305T 1.000 21 0% 16 25% 6 0% benign(0.001) tolerated(0.41) neutral(0.015) HMMPfam_Fucokinase FTSJD1 55783 genome.wustl.edu 37 16 71319778 71319778 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001099642.1 -1 validated p.A16T 0.099 119 0% 147 32.7% 3 0% benign(0) tolerated(0.51) neutral(0.009) NULL PHLPP2 23035 genome.wustl.edu 37 16 71683535 71683535 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_015020.2 -1 validated p.A1077D 1.000 115 0% 98 35.7% 0 - probably_damaging(0.994) deleterious(0.01) deleterious(0.858) NULL DHX38 9785 genome.wustl.edu 37 16 72139507 72139507 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014003.3 +1 reviewed p.G824V 1.000 86 0% 98 36.7% 40 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Helicase_C,HMMSmart_HELICc,superfamily_SSF52540 ZFHX3 463 genome.wustl.edu 37 16 72923723 72923723 + Nonsense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_006885.3 -1 reviewed p.R1119* 1.000 84 0% 95 42.1% 1 0% - - - HMMSmart_SM00451 CNTNAP4 85445 genome.wustl.edu 37 16 76528881 76528881 + Missense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_138994.3 +1 validated p.L646I 0.960 225 0.9% 276 38.8% 0 - benign(0) tolerated(0.85) neutral(0.001) superfamily_Concanavalin A-like lectins/glucanases PLCG2 5336 genome.wustl.edu 37 16 81927315 81927315 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_002661.2 +1 validated p.Y330H 1.000 24 0% 39 30.8% 2 0% possibly_damaging(0.81) deleterious(0) deleterious(0.750) HMMPfam_PI-PLC-X,HMMSmart_PLCXc,superfamily_PLC-like_Pdiesterase_TIM-brl PLCG2 5336 genome.wustl.edu 37 16 81969809 81969809 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_002661.2 +1 validated p.E960K 1.000 54 0% 56 46.4% 9 0% probably_damaging(0.994) deleterious(0) deleterious(0.897) HMMPfam_PI-PLC-Y,HMMSmart_PLCYc,superfamily_PLC-like_Pdiesterase_TIM-brl ZCCHC14 23174 genome.wustl.edu 37 16 87445164 87445164 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_015144.2 -1 validated p.A918T 1.000 88 0% 44 50% 5 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_zf-CCHC,HMMSmart_SM00343 VPS53 55275 genome.wustl.edu 37 17 602618 602618 + Silent SNP A A C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001128159.1 -1 reviewed p.S57 1.000 107 0% 115 37.4% 5 0% - - - HMMPfam_Vps53_N RAP1GAP2 23108 genome.wustl.edu 37 17 2901636 2901636 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_015085.4 +1 reviewed p.V389A 0.193 35 0% 61 29.5% 3 0% benign(0) tolerated(0.65) neutral(0.003) HMMPfam_Rap_GAP,superfamily_Rap/Ran-GAP (Pfam 02145) ATP2A3 489 genome.wustl.edu 37 17 3845940 3845940 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_174953.1 -1 reviewed p.R502H 0.558 38 0% 41 31.7% 11 0% benign(0.339) deleterious(0.01) deleterious(0.513) HMMPfam_Hydrolase,superfamily_Metal cation-transporting ATPase ATP-binding domain N,superfamily_Calcium ATPase transmembrane domain M LOC100288795 100288795 genome.wustl.edu 37 17 4544965 4544965 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 XM_002343502.1 +1 model p.A293T 0.000 23 0% 27 40.7% 0 - - - - NULL SLC52A1 55065 genome.wustl.edu 37 17 4937268 4937268 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001104577.1 -1 validated p.C172 0.999 54 0% 64 46.9% 1 0% - - - NULL ARHGEF15 22899 genome.wustl.edu 37 17 8218494 8218494 + Nonsense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_173728.2 +1 reviewed p.R387* 0.001 21 0% 30 50% 1 0% - - - NULL DNAH9 1770 genome.wustl.edu 37 17 11783507 11783507 + Nonsense_Mutation SNP A A T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001372.3 +1 reviewed p.K3531* 1.000 107 0% 95 41.1% 1 0% - - - NULL MYO15A 51168 genome.wustl.edu 37 17 18060279 18060279 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_016239.3 +1 reviewed p.Y2871 0.866 16 0% 17 58.8% 1 0% - - - HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_SH3_2 FLII 2314 genome.wustl.edu 37 17 18154692 18154692 + Frame_Shift_Del DEL C C - novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_002018.2 -1 reviewed p.V495fs 1.000 - - - - - - - - - superfamily_SSF55753 KIAA0100 9703 genome.wustl.edu 37 17 26958625 26958625 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014680.2 -1 validated p.V1391I 1.000 58 1.7% 94 35.1% 37 0% possibly_damaging(0.94) tolerated(1) neutral(0.385) NULL GGNBP2 79893 genome.wustl.edu 37 17 34945832 34945832 + Silent SNP A A C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_024835.2 +1 validated p.G695 1.000 138 0% 124 47.6% 44 0% - - - NULL ATP6V0A1 535 genome.wustl.edu 37 17 40630510 40630510 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001130020.1 +1 reviewed p.R186H 1.000 27 0% 58 50% 2 0% probably_damaging(0.997) deleterious(0.04) deleterious(0.815) HMMPfam_V_ATPase_I NAGLU 4669 genome.wustl.edu 37 17 40696161 40696161 + Nonsense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_000263.3 +1 reviewed p.Q713* 0.000 29 0% 28 28.6% 46 0% - - - HMMPfam_NAGLU WNK4 65266 genome.wustl.edu 37 17 40936447 40936447 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_032387.4 +1 reviewed p.P340 0.946 31 0% 30 46.7% 0 - - - - HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase WNK4 65266 genome.wustl.edu 37 17 40940372 40940372 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_032387.4 +1 reviewed p.P663S 0.008 89 0% 79 36.7% 0 - benign(0) tolerated(0.17) neutral(0.059) NULL ITGA2B 3674 genome.wustl.edu 37 17 42455762 42455762 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_000419.3 -1 reviewed p.A688T 0.937 13 0.000 9 0.556 0 - benign(0.11) tolerated(0.1) neutral(0.295) HMMPfam_Integrin_alpha2,superfamily_Integrin domains TBX21 30009 genome.wustl.edu 37 17 45820027 45820027 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_013351.1 +1 reviewed p.S181 1.000 7 0.000 23 0.435 0 - - - - HMMPfam_T-box,HMMSmart_TBOX,superfamily_P53_like_DNA_bnd CACNA1G 8913 genome.wustl.edu 37 17 48674220 48674220 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_018896.3 +1 validated p.A1065V 0.003 10 0.000 6 0.833 0 - benign(0.03) tolerated(0.29) neutral(0.031) NULL CACNA1G 8913 genome.wustl.edu 37 17 48696015 48696015 + Splice_Site SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_018896.3 +1 validated e33-1 1.000 18 0% 39 38.5% 0 - - - - - DGKE 8526 genome.wustl.edu 37 17 54939506 54939506 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_003647.2 +1 reviewed p.D473G 1.000 73 0% 95 26.3% 5 0% benign(0.02) tolerated(0.21) neutral(0.045) HMMPfam_DAGK_acc,HMMSmart_SM00045 PPM1E 22843 genome.wustl.edu 37 17 57033104 57033104 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014906.3 +1 reviewed p.T187A 0.049 72 0% 94 27.7% 0 - benign(0.002) deleterious(0.01) neutral(0.406) NULL TANC2 26115 genome.wustl.edu 37 17 61498807 61498807 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_025185.3 +1 validated p.E1822K 1.000 138 0% 137 35% 2 0% possibly_damaging(0.477) deleterious(0.01) deleterious(0.563) NULL KCNH6 81033 genome.wustl.edu 37 17 61611299 61611299 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_030779.2 +1 reviewed p.R243H 1.000 49 0% 61 44.3% 0 - probably_damaging(0.997) deleterious(0.01) deleterious(0.872) NULL ABCA9 10350 genome.wustl.edu 37 17 66982324 66982324 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_080283.3 -1 reviewed p.A1397T 0.007 238 0% 282 38.3% 1 0% possibly_damaging(0.943) tolerated(0.16) neutral(0.447) HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases LLGL2 3993 genome.wustl.edu 37 17 73569164 73569164 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001031803.1 +1 reviewed p.R844W 1.000 11 0% 12 41.7% 90 11.1% probably_damaging(1) deleterious(0) deleterious(0.945) NULL ENSG00000173213 0 genome.wustl.edu 37 18 47812 47812 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000308911 -1 known p.P305S 1.000 101 0% 74 35.1% 0 - probably_damaging(0.993) deleterious(0) deleterious(0.895) superfamily_Tub_FtsZ_C,HMMPfam_Tubulin_C PTPN2 5771 genome.wustl.edu 37 18 12817302 12817302 + Silent SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_002828.2 -1 reviewed p.P186 0.998 234 0% 266 22.9% 31 0% - - - HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMSmart_SM00404,superfamily_(Phosphotyrosine protein) phosphatases II C18orf34 374864 genome.wustl.edu 37 18 30928919 30928919 + Missense_Mutation SNP T T G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001105528.1 -1 validated p.K131T 0.000 74 0% 73 32.9% 0 - possibly_damaging(0.65) tolerated(0.34) neutral(0.251) NULL ZNF24 7572 genome.wustl.edu 37 18 32920247 32920247 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_006965.2 -1 validated p.A123V 0.997 219 0% 361 42.1% 10 0% unknown(0) tolerated(0.53) - HMMPfam_SCAN,HMMSmart_SCAN SETBP1 26040 genome.wustl.edu 37 18 42532629 42532629 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_015559.2 +1 validated p.K1108 0.962 126 0% 135 31.9% 2 0% - - - NULL PIAS2 9063 genome.wustl.edu 37 18 44470616 44470616 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_004671.2 -1 validated p.V142 1.000 120 0% 128 36.7% 9 0% - - - NULL DCC 1630 genome.wustl.edu 37 18 50734147 50734147 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_005215.3 +1 reviewed p.G607 1.000 131 0% 124 33.1% 0 - - - - HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III KDSR 2531 genome.wustl.edu 37 18 61002551 61002551 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_002035.2 -1 reviewed p.M273T 1.000 83 0% 93 35.5% 24 0% possibly_damaging(0.437) deleterious(0.01) deleterious(0.548) superfamily_NAD(P)-binding Rossmann-fold domains DSEL 92126 genome.wustl.edu 37 18 65179085 65179085 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_032160.2 -1 validated p.G931S 1.000 177 0% 206 35.4% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_P-loop containing nucleoside triphosphate hydrolases CCDC102B 79839 genome.wustl.edu 37 18 66513554 66513554 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001093729.1 +1 validated p.R278C 0.994 58 0% 44 36.4% 2 0% probably_damaging(1) deleterious(0) deleterious(0.945) NULL ZADH2 284273 genome.wustl.edu 37 18 72913712 72913712 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_175907.4 -1 validated p.R265C 1.000 82 0% 74 43.2% 22 0% probably_damaging(0.957) deleterious(0.03) deleterious(0.765) HMMPfam_ADH_zinc_N,superfamily_NAD(P)-binding Rossmann-fold domains ZNF516 9658 genome.wustl.edu 37 18 74092150 74092150 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000443185 -1 known p.G640 0.003 124 0% 102 45.1% 6 0% - - - NULL TMPRSS9 360200 genome.wustl.edu 37 19 2413784 2413784 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_182973.1 +1 provisional p.A413 0.005 11 0% 13 30.8% 0 - - - - HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases PIAS4 51588 genome.wustl.edu 37 19 4013181 4013181 + Silent SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_015897.2 +1 provisional p.V96 0.124 31 0% 25 32% 14 0% - - - NULL MAP2K2 5605 genome.wustl.edu 37 19 4097331 4097331 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_030662.3 -1 reviewed p.M310I 0.941 16 0% 16 62.5% 320 0% benign(0.001) tolerated(0.19) neutral(0.050) HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase CATSPERD 257062 genome.wustl.edu 37 19 5776246 5776246 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_152784.3 +1 validated p.G672 0.046 36 0% 43 30.2% 1 0% - - - NULL FBN3 84467 genome.wustl.edu 37 19 8206611 8206611 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_032447.3 -1 reviewed p.A285 0.038 34 0% 41 43.9% 0 - - - - HMMSmart_SM00179,superfamily_TB module/8-cys domain,HMMSmart_SM00181,HMMPfam_EGF_CA HNRNPM 4670 genome.wustl.edu 37 19 8553590 8553590 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_005968.3 +1 validated p.A682V 1.000 77 0% 60 20% 426 0.2% possibly_damaging(0.928) tolerated(0.08) deleterious(0.675) HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD ZNF560 147741 genome.wustl.edu 37 19 9577576 9577576 + Missense_Mutation SNP T T G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_152476.2 -1 validated p.T683P 0.949 210 0% 269 34.9% 0 - benign(0.005) tolerated(1) - superfamily_SSF57667 COL5A3 50509 genome.wustl.edu 37 19 10116303 10116303 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_015719.3 -1 reviewed p.G175 0.000 43 0% 56 44.6% 1 0% - - - HMMSmart_SM00210,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2 ZNF490 57474 genome.wustl.edu 37 19 12691818 12691818 + Silent SNP G G A rs140333364 by1000genomes TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_020714.2 -1 validated p.T357 0.926 174 0% 277 32.1% 2 0% - - - superfamily_SSF57667 WDR83 84292 genome.wustl.edu 37 19 12786478 12786493 + Frame_Shift_Del DEL GCAGGCTGAAGCCAGG GCAGGCTGAAGCCAGG - novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 GCAGGCTGAAGCCAGG GCAGGCTGAAGCCAGG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001099737.2 +1 reviewed p.A314fs 0.000:0.071:0.068:0.916:0.967:0.986:0.965:0.962:0.670 - - - - - - - - - NULL TNPO2 30000 genome.wustl.edu 37 19 12826518 12826518 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001136196.1 -1 validated p.L121 1.000 15 0% 16 37.5% 13 0% - - - HMMPfam_HEAT,superfamily_ARM repeat CACNA1A 773 genome.wustl.edu 37 19 13418639 13418639 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001127222.1 -1 reviewed p.T648I 1.000 80 0% 83 39.8% 0 - possibly_damaging(0.757) deleterious(0) deleterious(0.724) HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels TPM4 7171 genome.wustl.edu 37 19 16212072 16212072 + Splice_Site SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001145160.1 +1 reviewed e9-2 1.000 39 0% 53 37.7% 2 0% - - - - NWD1 284434 genome.wustl.edu 37 19 16918719 16918719 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001007525.2 +1 validated p.S1218 0.005 114 0% 167 28.7% 2 0% - - - superfamily_WD40 repeat-like NDUFA13 51079 genome.wustl.edu 37 19 19638931 19638931 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_015965.6 +1 reviewed p.T227M 0.000 11 0% 13 53.8% 1257 0% probably_damaging(0.96) deleterious(0) deleterious(0.848) NULL ZNF253 56242 genome.wustl.edu 37 19 20003485 20003485 + Nonsense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_021047.2 +1 provisional p.R477* 0.000 147 0% 238 23.5% 0 - - - - superfamily_C2H2 and C2HC zinc fingers GPATCH1 55094 genome.wustl.edu 37 19 33581756 33581756 + Missense_Mutation SNP T T G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_018025.2 +1 provisional p.D93E 0.969 41 0% 51 31.4% 2 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_DUF1604 U2AF1L4 199746 genome.wustl.edu 37 19 36233612 36233612 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_144987.2 -1 validated p.A166T 0.000 17 0% 26 50% 21 0% possibly_damaging(0.507) deleterious(0) deleterious(0.614) NULL RYR1 6261 genome.wustl.edu 37 19 38997112 38997112 + Missense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_000540.2 +1 reviewed p.A2873D 1.000 66 0% 84 16.7% 0 - probably_damaging(0.987) - - HMMPfam_RyR PLEKHG2 64857 genome.wustl.edu 37 19 39915767 39915767 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_022835.2 +1 validated p.R1332W 0.997 19 0% 18 61.1% 6 0% probably_damaging(0.999) deleterious(0) deleterious(0.935) NULL EGLN2 112398 genome.wustl.edu 37 19 41312523 41312523 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_053046.2 +1 reviewed p.G303S 1.000 121 0% 126 42.1% 87 0% benign(0.124) tolerated(0.1) neutral(0.296) HMMPfam_2OG-FeII_Oxy,HMMSmart_SM00702 ATP5SL 55101 genome.wustl.edu 37 19 41939292 41939292 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_018035.2 -1 validated p.V161M 0.410 51 2% 57 43.9% 35 0% benign(0.223) deleterious(0.02) neutral(0.405) superfamily_RNI-like ATP1A3 478 genome.wustl.edu 37 19 42471835 42471835 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_152296.3 -1 reviewed p.A967V 1.000 13 0% 25 36% 0 - possibly_damaging(0.703) tolerated(0.4) neutral(0.269) HMMPfam_Cation_ATPase_C,superfamily_SSF81665 ATP1A3 478 genome.wustl.edu 37 19 42486128 42486128 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_152296.3 -1 reviewed p.R375H 1.000 172 0% 123 35.8% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Hydrolase,superfamily_SSF56784,superfamily_SSF81660,superfamily_SSF81665 MEGF8 1954 genome.wustl.edu 37 19 42853851 42853851 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001410.2 +1 validated p.S766 0.916 35 0% 50 40% 1 0% - - - NULL KCNA7 3743 genome.wustl.edu 37 19 49573636 49573636 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_031886.2 -1 reviewed p.A352V 1.000 36 0% 18 50% 0 - possibly_damaging(0.809) tolerated(0.09) deleterious(0.601) HMMPfam_Ion_trans,superfamily_SSF81324 TEAD2 8463 genome.wustl.edu 37 19 49844674 49844674 + Silent SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_003598.1 -1 provisional p.T417 0.983 47 0% 52 36.5% 132 0% - - - HMMPfam_TEA MYBPC2 4606 genome.wustl.edu 37 19 50940775 50940775 + Missense_Mutation SNP G G A rs138764172 by1000genomes TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_004533.3 +1 validated p.R170H 0.967 33 0% 37 40.5% 0 - probably_damaging(0.996) deleterious(0) deleterious(0.906) NULL SIGLEC8 27181 genome.wustl.edu 37 19 51960897 51960897 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014442.2 -1 validated p.G184E 0.010 90 0% 90 32.2% 0 - possibly_damaging(0.855) tolerated(0.16) neutral(0.390) HMMSmart_SM00409,HMMPfam_C2-set_2,superfamily_Immunoglobulin PRKCG 5582 genome.wustl.edu 37 19 54403513 54403513 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_002739.3 +1 reviewed p.Y436 0.977 97 0% 84 32.1% 0 - - - - HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase TSEN34 79042 genome.wustl.edu 37 19 54695637 54695637 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001077446.2 +1 reviewed p.E103 1.000 76 0% 111 43.2% 65 0% - - - NULL ZNF628 89887 genome.wustl.edu 37 19 55992996 55992996 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_033113.2 +1 validated p.R142C 1.000 54 0% 20 30% 4 0% probably_damaging(0.998) deleterious(0) deleterious(0.919) superfamily_C2H2 and C2HC zinc fingers DEFB129 140881 genome.wustl.edu 37 20 210074 210074 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_080831.2 +1 validated p.P72S 0.000 134 0% 215 37.7% 0 - benign(0) tolerated(0.52) neutral(0.009) NULL ProSAPiP1 9762 genome.wustl.edu 37 20 3146538 3146538 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014731.2 -1 validated p.A310T 0.998 8 0.000 10 0.600 7 0% benign(0.264) tolerated(0.67) neutral(0.030) NULL TTLL9 164395 genome.wustl.edu 37 20 30530758 30530758 + Nonsense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000375922 +1 known p.R319* 0.855 192 0% 204 37.7% 1 0% - - - NULL AHCY 191 genome.wustl.edu 37 20 32883218 32883218 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_000687.2 -1 reviewed p.V68I 0.195 18 0% 25 36% 91 0% benign(0) tolerated(0.14) neutral(0.249) HMMPfam_AdoHcyase,superfamily_Formate/glycerate dehydrogenase catalytic domain-like MMP24 10893 genome.wustl.edu 37 20 33842487 33842487 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_006690.3 +1 reviewed p.G249 0.999 239 0% 261 34.9% 0 - - - - "HMMPfam_Peptidase_M10,HMMSmart_SM00235,superfamily_Metalloproteases (""zincins"") catalytic domain" RBM39 9584 genome.wustl.edu 37 20 34302145 34302145 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_184234.1 -1 reviewed p.T353I 1.000 113 0% 181 42% 238 0% probably_damaging(0.991) deleterious(0) deleterious(0.889) NULL SLC32A1 140679 genome.wustl.edu 37 20 37356575 37356575 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_080552.2 +1 reviewed p.D291N 1.000 43 0% 19 36.8% 0 - benign(0.019) tolerated(0.1) neutral(0.287) HMMPfam_Aa_trans ENSG00000245952 0 genome.wustl.edu 37 20 47275800 47275801 + RNA INS - - AGGAAGGAAGGAAGGAAGGG rs73142202 by1000genomes TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000456747 +1 known NULL 0.000:0.000 - - - - - - - - - - PARD6B 84612 genome.wustl.edu 37 20 49354524 49354524 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_032521.2 +1 reviewed p.H66R 1.000 73 0% 118 34.7% 2 0% probably_damaging(0.999) tolerated(0.29) deleterious(0.519) HMMPfam_PB1,HMMSmart_PB1 ZFP64 55734 genome.wustl.edu 37 20 50769149 50769149 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_018197.2 -1 validated p.A528T 0.166 23 0% 37 48.6% 17 0% possibly_damaging(0.797) deleterious(0.02) deleterious(0.682) NULL TAF4 6874 genome.wustl.edu 37 20 60584156 60584156 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_003185.3 -1 reviewed p.Q612 1.000 82 0% 80 32.5% 6 0% - - - HMMPfam_TAFH,HMMSmart_TAFH C20orf166 128826 genome.wustl.edu 37 20 61167675 61167675 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_178463.3 +1 validated p.H49Y 0.000 19 0% 21 23.8% 0 - unknown(0) - - NULL PCMTD2 55251 genome.wustl.edu 37 20 62904848 62904848 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_018257.2 +1 validated p.P327 0.000 162 0% 250 44% 26 0% - - - NULL KRTAP6-2 337967 genome.wustl.edu 37 21 31971025 31971025 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_181604.1 -1 validated p.G57S 0.473 84 0% 109 45% 0 - unknown(0) - - NULL LCA5L 150082 genome.wustl.edu 37 21 40800415 40800415 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_152505.3 -1 validated p.S2Y 1.000 97 0% 140 39.3% 2 0% probably_damaging(0.996) deleterious(0) deleterious(0.906) NULL DSCAM 1826 genome.wustl.edu 37 21 41550907 41550907 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001389.3 -1 validated p.R965Q 1.000 35 0% 44 36.4% 0 - benign(0.004) tolerated(0.42) neutral(0.014) HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III KRTAP10-9 386676 genome.wustl.edu 37 21 46047252 46047252 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_198690.2 +1 validated p.S55N 0.899 81 0% 92 37% 0 - unknown(0) deleterious(0.01) - HMMPfam_Keratin_B2 LSS 4047 genome.wustl.edu 37 21 47611102 47611102 + Silent SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001001438.2 -1 reviewed p.T705 0.000 38 0% 25 28% 18 0% - - - superfamily_Terp_cyc_toroid CCT8L2 150160 genome.wustl.edu 37 22 17072284 17072284 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014406.4 -1 validated p.R386Q 0.086 88 0% 59 30.5% 0 - benign(0.203) deleterious(0.01) neutral(0.425) HMMPfam_Cpn60_TCP1,superfamily_GroEL equatorial domain-like,superfamily_GroEL-intermediate domain like CECR5 27440 genome.wustl.edu 37 22 17619488 17619488 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_033070.2 -1 validated p.A296V 0.989 253 0% 190 31.1% 62 0% benign(0.199) tolerated(0.11) neutral(0.291) superfamily_HAD-like CLTCL1 8218 genome.wustl.edu 37 22 19178912 19178912 + Missense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_007098.3 -1 reviewed p.Q1409H 0.998 50 0% 38 23.7% 1 0% benign(0.108) tolerated(0.25) neutral(0.045) HMMPfam_Clathrin,HMMSmart_SM00299,superfamily_ARM repeat MED15 51586 genome.wustl.edu 37 22 20905620 20905620 + Missense_Mutation SNP A A C rs116430800 byFrequency;by1000genomes TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000420849 +1 known p.M1L 0.000 28 0% 41 56.1% 0 - unknown(0) - - NULL LZTR1 8216 genome.wustl.edu 37 22 21350071 21350071 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_006767.3 +1 reviewed p.E660G 1.000 37 0% 18 44.4% 16 0% possibly_damaging(0.561) deleterious(0.04) deleterious(0.540) superfamily_POZ domain,HMMPfam_BTB SLC2A11 66035 genome.wustl.edu 37 22 24226963 24226963 + Missense_Mutation SNP G G T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_030807.3 +1 validated p.R480I 1.000 102 0% 105 28.6% 2 0% benign(0.208) deleterious(0) neutral(0.465) NULL XBP1 7494 genome.wustl.edu 37 22 29191690 29191690 + Missense_Mutation SNP A A C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001079539.1 -1 reviewed p.L202V 1.000 159 0% 154 34.4% 841 0% possibly_damaging(0.653) deleterious(0.02) deleterious(0.613) NULL DEPDC5 9681 genome.wustl.edu 37 22 32234732 32234732 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014662.2 +1 validated p.R797C 1.000 143 0% 157 38.9% 9 0% probably_damaging(1) deleterious(0) deleterious(0.945) NULL ZBED4 9889 genome.wustl.edu 37 22 50279861 50279861 + Missense_Mutation SNP A A T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_014838.2 +1 validated p.S851C 0.997 24 0% 25 36% 17 0% probably_damaging(1) deleterious(0.03) deleterious(0.865) NULL ENSG00000211459 0 genome.wustl.edu 37 MT 1552 1552 + RNA SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000389680 +1 known NULL NULL 33 0% 23 21.7% 572 0.3% - - - - AKAP17A 8227 genome.wustl.edu 37 X 1712692 1712692 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_005088.2 +1 validated p.R113C 0.979 36 0% 70 35.7% 31 0% probably_damaging(1) deleterious(0) deleterious(0.945) NULL KAL1 3730 genome.wustl.edu 37 X 8667763 8667763 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_000216.2 -1 reviewed p.C77 1.000 57 0% 56 32.1% 0 - - - - NULL WWC3 55841 genome.wustl.edu 37 X 10058845 10058845 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_015691.3 +1 validated p.Y138H 1.000 75 0% 96 33.3% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) NULL WWC3 55841 genome.wustl.edu 37 X 10104689 10104689 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_015691.3 +1 validated p.S927N 1.000 150 0% 154 35.7% 4 0% probably_damaging(1) deleterious(0) deleterious(0.945) NULL GRPR 2925 genome.wustl.edu 37 X 16168542 16168542 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_005314.2 +1 reviewed p.A176 0.865 189 0% 273 22.3% 0 - - - - HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like PHKA2 5256 genome.wustl.edu 37 X 18912471 18912471 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_000292.2 -1 reviewed p.R1130C 1.000 27 0% 26 38.5% 15 0% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_PHK_AB RPS6KA3 6197 genome.wustl.edu 37 X 20222141 20222141 + Frame_Shift_Del DEL T T - novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_004586.2 -1 reviewed p.V109fs 1.000 - - - - - - - - - HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase MBTPS2 51360 genome.wustl.edu 37 X 21871536 21871536 + Silent SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_015884.3 +1 reviewed p.I195 1.000 104 0% 200 40.5% 2 0% - - - HMMPfam_Peptidase_M50 DCAF8L2 347442 genome.wustl.edu 37 X 27766221 27766221 + Silent SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001136533.1 +1 provisional p.E403 0.091 105 0% 188 35.6% 0 - - - - superfamily_WD40 repeat-like DCAF8L1 139425 genome.wustl.edu 37 X 27997795 27997795 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001017930.1 -1 reviewed p.R553C 0.224 224 0% 285 29.8% 0 - probably_damaging(0.996) deleterious(0) deleterious(0.906) NULL MAGEB3 4114 genome.wustl.edu 37 X 30255006 30255006 + Missense_Mutation SNP C C A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_002365.4 +1 reviewed p.A322D 0.000 70 0% 83 42.2% 0 - benign(0.013) deleterious(0.02) neutral(0.384) NULL DMD 1756 genome.wustl.edu 37 X 31496309 31496309 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_004006.2 -1 reviewed p.R2951C 0.916 75 0% 79 38% 0 - probably_damaging(1) deleterious(0.01) deleterious(0.905) HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat SRPX 8406 genome.wustl.edu 37 X 38037572 38037572 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_006307.4 -1 validated p.D41 0.931 56 0% 74 44.6% 0 - - - - NULL CXorf38 159013 genome.wustl.edu 37 X 40506317 40506317 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_144970.2 -1 validated p.V98A 0.418 20 0% 22 72.7% 3 0% possibly_damaging(0.631) tolerated(0.08) deleterious(0.520) NULL USP9X 8239 genome.wustl.edu 37 X 41043909 41043910 + Frame_Shift_Del DEL GT GT - novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 GT GT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001039590.2 +1 reviewed p.V1181fs 1.000:1.000 - - - - - - - - - NULL PHF16 9767 genome.wustl.edu 37 X 46918111 46918111 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001077445.1 +1 reviewed p.G702S 0.989 101 0% 74 13.5% 2 0% benign(0.001) tolerated(0.82) neutral(0.001) NULL MIR188 406964 genome.wustl.edu 37 X 49768186 49768186 + RNA SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 ENST00000385034 +1 known NULL 1.000 25 0% 28 21.4% 0 - - - - - CLCN5 1184 genome.wustl.edu 37 X 49855336 49855336 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001127898.1 +1 reviewed p.R718Q 1.000 112 0% 90 30% 5 0% possibly_damaging(0.925) tolerated(0.08) deleterious(0.673) HMMPfam_CBS TRO 7216 genome.wustl.edu 37 X 54949838 54949838 + Silent SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001039705.1 +1 reviewed p.S291 0.112 58 0% 58 37.9% 0 - - - - NULL RRAGB 10325 genome.wustl.edu 37 X 55755741 55755741 + Missense_Mutation SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_016656.3 +1 validated p.S109P 1.000 169 0% 225 40% 4 0% benign(0.115) deleterious(0) neutral(0.454) superfamily_P-loop containing nucleoside triphosphate hydrolases ARHGEF9 23229 genome.wustl.edu 37 X 62898285 62898285 + Silent SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_015185.2 -1 reviewed p.V243 0.796 29 0% 47 38.3% 9 0% - - - HMMPfam_RhoGEF,HMMSmart_RhoGEF,superfamily_DH-domain FAM123B 139285 genome.wustl.edu 37 X 63412041 63412041 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_152424.3 -1 reviewed p.D376N 1.000 313 0% 306 35.3% 0 - probably_damaging(0.995) deleterious(0.01) deleterious(0.863) HMMPfam_WTX SLC7A3 84889 genome.wustl.edu 37 X 70148477 70148477 + Nonsense_Mutation SNP A A T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001048164.2 -1 reviewed p.L179* 1.000 40 0% 57 35.1% 2 0% - - - NULL TAF1 6872 genome.wustl.edu 37 X 70617241 70617241 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_004606.3 +1 reviewed p.R1202H 1.000 172 0% 181 32% 9 0% probably_damaging(1) deleterious(0) deleterious(0.945) NULL ACRC 93953 genome.wustl.edu 37 X 70830621 70830621 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_052957.4 +1 validated p.R568W 0.000 95 0% 97 27.8% 0 - possibly_damaging(0.902) deleterious(0.01) deleterious(0.762) HMMSmart_SM00731,HMMPfam_SprT-like NHSL2 340527 genome.wustl.edu 37 X 71358888 71358888 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001013627.2 +1 provisional p.R131Q 1.000 32 0% 28 50% 1 0% probably_damaging(0.994) deleterious(0.03) deleterious(0.817) NULL BRWD3 254065 genome.wustl.edu 37 X 79979255 79979255 + Missense_Mutation SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_153252.4 -1 reviewed p.Y548H 1.000 65 0% 60 35% 1 0% probably_damaging(0.978) tolerated(0.07) deleterious(0.740) superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase PCDH11X 27328 genome.wustl.edu 37 X 91873846 91873846 + Silent SNP A A G novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_032968.3 +1 reviewed p.S1317 0.988 287 0% 326 37.7% 0 - - - - NULL DIAPH2 1730 genome.wustl.edu 37 X 96185755 96185755 + Silent SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_006729.4 +1 reviewed p.N334 1.000 106 0% 118 26.3% 0 - - - - HMMPfam_Drf_FH3 PCDH19 57526 genome.wustl.edu 37 X 99551653 99551653 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001105243.1 -1 reviewed p.S976 0.103 126 0% 146 32.9% 0 - - - - NULL CENPI 2491 genome.wustl.edu 37 X 100382163 100382163 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_006733.2 +1 reviewed p.A272T 0.454 76 0% 120 42.5% 3 0% benign(0.066) tolerated(0.4) neutral(0.021) HMMPfam_Mis6 DOCK11 139818 genome.wustl.edu 37 X 117783058 117783058 + Missense_Mutation SNP A A C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_144658.3 +1 validated p.K1517Q 1.000 245 0% 249 33.3% 2 0% benign(0.02) deleterious(0.02) neutral(0.384) NULL KIAA1210 57481 genome.wustl.edu 37 X 118222955 118222955 + Missense_Mutation SNP C C A rs192473734 by1000genomes TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_020721.1 -1 validated p.L746F 0.000 160 0% 117 39.3% 0 - possibly_damaging(0.435) tolerated(0.16) neutral(0.201) NULL XIAP 331 genome.wustl.edu 37 X 123020210 123020210 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_001167.2 +1 reviewed p.R233Q 1.000 125 0% 114 41.2% 2 0% probably_damaging(0.999) tolerated(0.12) deleterious(0.751) superfamily_SSF57924 DCAF12L1 139170 genome.wustl.edu 37 X 125686089 125686089 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_178470.4 -1 reviewed p.G168D 0.998 30 0% 27 25.9% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_WD40_like MAGEC3 139081 genome.wustl.edu 37 X 140967125 140967125 + Silent SNP T T C novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_138702.1 +1 reviewed p.S141 0.004 12 0% 20 35% 0 - - - - NULL MAGEA3 4102 genome.wustl.edu 37 X 151935711 151935711 + Silent SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_005362.3 -1 reviewed p.S152 0.000 182 0% 199 31.7% 0 - - - - HMMPfam_MAGE TREX2 11219 genome.wustl.edu 37 X 152710723 152710723 + Missense_Mutation SNP C C T novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_080701.3 -1 reviewed p.V56I 0.989 11 0% 10 70% 2 0% benign(0.384) tolerated(0.27) neutral(0.156) HMMSmart_EXOIII,superfamily_RNaseH_fold,HMMPfam_Exonuc_X-T L1CAM 3897 genome.wustl.edu 37 X 153129848 153129848 + Missense_Mutation SNP G G A novel TCGA-B5-A0JR-01A-13W-A062-09 TCGA-B5-A0JR-10A-01W-A062-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx a29c8bdb-d830-4e70-b8c1-eeac0d039c50 4cb71b4a-e29c-4ed2-98bf-dee2d53f6cc2 NM_000425.3 -1 reviewed p.T1084I 0.380 44 0% 56 26.8% 0 - probably_damaging(0.969) deleterious(0.01) deleterious(0.817) superfamily_Fibronectin type III