Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	rsID	rsID_ref_var_alleles	CAF	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumor_var_reads	tumor_vaf	normal_ref_reads_val	normal_var_reads_val	normal_vaf_val	tumor_ref_reads_val	tumor_var_reads_val	tumor_vaf_val
CXorf23	0	genome.wustl.edu	37	X	19983216	19983216	+	Missense_Mutation	SNP	C	C	G			TCGA-4V-A9QR-01A-11D-A423-09	TCGA-4V-A9QR-10A-01D-A426-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	709cab9b-5e13-4d15-bbc6-f447d5d2e3ee	190d2d1b-cc59-4117-9b23-f3d5090c8f9a	X	19983216	19983216	C	G	SNP	CXorf23	ENST00000379687	human	ensembl	74_37	-1	known	missense	c.1220	p.R407T	0	NULL	NULL	0	no_errors	0	0	0	140	0	0	134	26	16.25	274	0	0.00	504	92	15.41
PSMA5	0	genome.wustl.edu	37	1	109957976	109957976	+	Missense_Mutation	SNP	T	T	C			TCGA-4V-A9QR-01A-11D-A423-09	TCGA-4V-A9QR-10A-01D-A426-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	709cab9b-5e13-4d15-bbc6-f447d5d2e3ee	190d2d1b-cc59-4117-9b23-f3d5090c8f9a	1	109957976	109957976	T	C	SNP	PSMA5	ENST00000271308	human	ensembl	74_37	-1	known	missense	c.106	p.T36A	1	pfam_Proteasome_sua/b	pfam_Proteasome_sua/b,pfam_Proteasome_asu_N,smart_Proteasome_asu_N	0	no_errors	0	0	0	51	0	0	41	6	12.77	260	0	0.00	274	51	15.69
RAB3GAP2	0	genome.wustl.edu	37	1	220363843	220363843	+	Missense_Mutation	SNP	T	T	C			TCGA-4V-A9QR-01A-11D-A423-09	TCGA-4V-A9QR-10A-01D-A426-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	709cab9b-5e13-4d15-bbc6-f447d5d2e3ee	190d2d1b-cc59-4117-9b23-f3d5090c8f9a	1	220363843	220363843	T	C	SNP	RAB3GAP2	ENST00000358951	human	ensembl	74_37	-1	known	missense	c.1507	p.K503E	1	superfamily_WD40_repeat_dom	superfamily_WD40_repeat_dom	0	no_errors	0	0	0	27	0	0	23	5	17.86	297	0	0.00	304	34	10.03
U2SURP	0	genome.wustl.edu	37	3	142773813	142773813	+	Missense_Mutation	SNP	C	C	T			TCGA-4V-A9QR-01A-11D-A423-09	TCGA-4V-A9QR-10A-01D-A426-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	709cab9b-5e13-4d15-bbc6-f447d5d2e3ee	190d2d1b-cc59-4117-9b23-f3d5090c8f9a	3	142773813	142773813	C	T	SNP	U2SURP	ENST00000473835	human	ensembl	74_37	1	known	missense	c.2803	p.P935S	1	NULL	pfam_Surp,pfam_RRM_dom,superfamily_Surp,superfamily_ENTH_VHS,smart_RRM_dom,smart_Surp,smart_CID_dom,pfscan_Surp,pfscan_RRM_dom	0	no_errors	0	0	0	51	0	0	47	7	12.96	153	0	0.00	185	9	4.64
LOC100996870	0	genome.wustl.edu	37	9	66457330	66457330	+	RNA	SNP	G	G	T			TCGA-4V-A9QR-01A-11D-A423-09	TCGA-4V-A9QR-10A-01D-A426-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	709cab9b-5e13-4d15-bbc6-f447d5d2e3ee	190d2d1b-cc59-4117-9b23-f3d5090c8f9a	9	66457330	66457330	G	T	SNP	LOC100996870	ENST00000424345	human	ensembl	74_37	1	known	rna	NULL	NULL	0.2	0	0	0	no_errors	0	0	0	55	1	1.79	66	6	8.33	14	0	0.00	27	3	10.00
HSPA14	0	genome.wustl.edu	37	10	14909169	14909169	+	Missense_Mutation	SNP	A	A	G			TCGA-4V-A9QR-01A-11D-A423-09	TCGA-4V-A9QR-10A-01D-A426-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	709cab9b-5e13-4d15-bbc6-f447d5d2e3ee	190d2d1b-cc59-4117-9b23-f3d5090c8f9a	10	14909169	14909169	A	G	SNP	HSPA14	ENST00000378372	human	ensembl	74_37	1	known	missense	c.1081	p.I361V	0.006	pfam_Hsp_70_fam,prints_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	0	no_errors	0	0	0	45	0	0	38	6	13.64	235	0	0.00	299	26	7.98
HTR7	0	genome.wustl.edu	37	10	92508880	92508880	+	Silent	SNP	G	G	A			TCGA-4V-A9QR-01A-11D-A423-09	TCGA-4V-A9QR-10A-01D-A426-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	709cab9b-5e13-4d15-bbc6-f447d5d2e3ee	190d2d1b-cc59-4117-9b23-f3d5090c8f9a	10	92508880	92508880	G	A	SNP	HTR7	ENST00000336152	human	ensembl	74_37	-1	known	silent	c.1011	p.T337	0.009	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_5HT_7_rcpt,prints_GPCR_Rhodpsn,prints_Melcrt_ACTH_rcpt	0	no_errors	0	0	0	75	0	0	63	7	9.86	114	0	0.00	181	15	7.65
TRPM5	0	genome.wustl.edu	37	11	2438977	2438977	+	Missense_Mutation	SNP	A	A	G			TCGA-4V-A9QR-01A-11D-A423-09	TCGA-4V-A9QR-10A-01D-A426-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	709cab9b-5e13-4d15-bbc6-f447d5d2e3ee	190d2d1b-cc59-4117-9b23-f3d5090c8f9a	11	2438977	2438977	A	G	SNP	TRPM5	ENST00000452833	human	ensembl	74_37	-1	known	missense	c.995	p.I332T	1	NULL	superfamily_Ankyrin_rpt-contain_dom	0	no_errors	0	0	0	76	0	0	60	8	11.76	80	1	1.23	71	16	18.39
KIF21A	0	genome.wustl.edu	37	12	39731002	39731002	+	Missense_Mutation	SNP	G	G	A			TCGA-4V-A9QR-01A-11D-A423-09	TCGA-4V-A9QR-10A-01D-A426-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	709cab9b-5e13-4d15-bbc6-f447d5d2e3ee	190d2d1b-cc59-4117-9b23-f3d5090c8f9a	12	39731002	39731002	G	A	SNP	KIF21A	ENST00000395670	human	ensembl	74_37	-1	known	missense	c.2314	p.R772C	1	NULL	pfam_Kinesin_motor_dom,pfam_WD40_repeat,superfamily_P-loop_NTPase,superfamily_WD40_repeat_dom,superfamily_Prefoldin,superfamily_ARM-type_fold,smart_Kinesin_motor_dom,smart_WD40_repeat,pfscan_Kinesin_motor_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Kinesin_motor_dom	0	no_errors	0	0	0	37	0	0	39	5	11.36	206	0	0.00	337	39	10.37
RLBP1	0	genome.wustl.edu	37	15	89761830	89761830	+	Missense_Mutation	SNP	G	G	A			TCGA-4V-A9QR-01A-11D-A423-09	TCGA-4V-A9QR-10A-01D-A426-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	709cab9b-5e13-4d15-bbc6-f447d5d2e3ee	190d2d1b-cc59-4117-9b23-f3d5090c8f9a	15	89761830	89761830	G	A	SNP	RLBP1	ENST00000268125	human	ensembl	74_37	-1	known	missense	c.107	p.P36L	0	pfam_CRAL/TRIO_N_dom	pfam_CRAL-TRIO_dom,pfam_CRAL/TRIO_N_dom,superfamily_CRAL-TRIO_dom,superfamily_CRAL/TRIO_N_dom,smart_CRAL-TRIO_dom,prints_CRAL-bd_toc_tran,pfscan_CRAL-TRIO_dom	0	no_errors	rs200143313	G->A	0	46	0	0	16	5	23.81	123	1	0.81	127	35	21.60
WDR81	0	genome.wustl.edu	37	17	1628569	1628569	+	Missense_Mutation	SNP	G	G	A			TCGA-4V-A9QR-01A-11D-A423-09	TCGA-4V-A9QR-10A-01D-A426-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	709cab9b-5e13-4d15-bbc6-f447d5d2e3ee	190d2d1b-cc59-4117-9b23-f3d5090c8f9a	17	1628569	1628569	G	A	SNP	WDR81	ENST00000409644	human	ensembl	74_37	1	known	missense	c.316	p.E106K	1	NULL	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_Kinase-like_dom,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	0	no_errors	0	0	0	41	0	0	27	5	15.15	65	0	0.00	70	6	7.89
SLC25A11	0	genome.wustl.edu	37	17	4843135	4843135	+	Missense_Mutation	SNP	T	T	C			TCGA-4V-A9QR-01A-11D-A423-09	TCGA-4V-A9QR-10A-01D-A426-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	709cab9b-5e13-4d15-bbc6-f447d5d2e3ee	190d2d1b-cc59-4117-9b23-f3d5090c8f9a	17	4843135	4843135	T	C	SNP	SLC25A11	ENST00000225665	human	ensembl	74_37	-1	known	missense	c.71	p.K24R	1	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	0	no_errors	0	0	0	137	0	0	95	13	11.93	166	0	0.00	153	25	14.04
ZNF788	0	genome.wustl.edu	37	19	12221205	12221205	+	Missense_Mutation	SNP	G	G	A			TCGA-4V-A9QR-01A-11D-A423-09	TCGA-4V-A9QR-10A-01D-A426-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	709cab9b-5e13-4d15-bbc6-f447d5d2e3ee	190d2d1b-cc59-4117-9b23-f3d5090c8f9a	19	12221205	12221205	G	A	SNP	ZNF788	ENST00000596883	human	ensembl	74_37	1	putative	missense	c.149	p.R50Q	0.013	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	0	no_errors	rs191263400	G->A	0.9998,0.0001997	78	0	0	67	7	9.33	187	0	0.00	206	23	10.00
CLIP3	0	genome.wustl.edu	37	19	36517116	36517116	+	Missense_Mutation	SNP	G	G	T			TCGA-4V-A9QR-01A-11D-A423-09	TCGA-4V-A9QR-10A-01D-A426-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	709cab9b-5e13-4d15-bbc6-f447d5d2e3ee	190d2d1b-cc59-4117-9b23-f3d5090c8f9a	19	36517116	36517116	G	T	SNP	CLIP3	ENST00000360535	human	ensembl	74_37	-1	known	missense	c.614	p.A205D	1	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_CAP-Gly_domain,pfam_Ankyrin_rpt,superfamily_CAP-Gly_domain,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_CAP-Gly_domain	0	no_errors	0	0	0	44	0	0	25	6	19.35	39	0	0.00	42	4	8.70
NLRP5	0	genome.wustl.edu	37	19	56565026	56565026	+	Missense_Mutation	SNP	G	G	A			TCGA-4V-A9QR-01A-11D-A423-09	TCGA-4V-A9QR-10A-01D-A426-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	709cab9b-5e13-4d15-bbc6-f447d5d2e3ee	190d2d1b-cc59-4117-9b23-f3d5090c8f9a	19	56565026	56565026	G	A	SNP	NLRP5	ENST00000390649	human	ensembl	74_37	1	known	missense	c.3151	p.A1051T	0	smart_Leu-rich_rpt_RNase_inh_sub-typ	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	0	no_errors	rs374153940	G->A	0.9996,0.0003994	42	0	0	24	5	17.24	134	0	0.00	119	19	13.67
ZNF736	0	genome.wustl.edu	37	7	63809328	63809328	+	Missense_Mutation	SNP	C	C	G			TCGA-4V-A9QR-01A-11D-A423-09	TCGA-4V-A9QR-10A-01D-A426-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	709cab9b-5e13-4d15-bbc6-f447d5d2e3ee	190d2d1b-cc59-4117-9b23-f3d5090c8f9a	7	63809328	63809328	C	G	SNP	ZNF736	ENST00000355095	human	ensembl	74_37	1	known	missense	c.1087	p.H363D	1	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	0	no_errors	0	0	0	43	0	0	45	6	11.76	18	0	0.00	8	0	0.00
CXorf38	0	genome.wustl.edu	37	X	40506570	40506570	+	Frame_Shift_Del	DEL	G	G	-			TCGA-4V-A9QR-01A-11D-A423-09	TCGA-4V-A9QR-10A-01D-A426-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	709cab9b-5e13-4d15-bbc6-f447d5d2e3ee	190d2d1b-cc59-4117-9b23-f3d5090c8f9a	X	40506570	40506570	G	0	DEL	CXorf38	ENST00000327877	human	ensembl	74_37	-1	known	frame_shift_del	c.203	p.P68fs	0.997	NULL	NULL	0	no_errors	0	0	0	13	0	0	4	2	33.33	3	0	0.00	6	0	0.00