Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COSMIC_Codon COSMIC_Gene Transcript_Id Exon ChromChange AAChange Genome_Plus_Minus_10_Bp Drug_Target TTotCov_SOL TVarCov_SOL TVaf_SOL NTotCov_SOL NVarCov_SOL NVaf_SOL dbSNPPopFreq COSMIC_Gene_Freq COSMIC_Site_Freq Ttot_rna Tvar_rna Tvaf_rna note germline-maf-frequency IGV BMP8B 656 mdanderson.org 37 1 40226206 40226206 + Missense_Mutation SNP G G T rs147897246 bycluster;byfrequency;alternate_allele TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 BMP8B,NS,carcinoma,+1,1 BMP8B NM_001720 exon7 c.C1094A p.A365E CAGCACGCCTTGG 52 3 0.06 44 1 0.0227272727 1 1 1 0 0.00 DDX20 11218 mdanderson.org 37 1 112298730 112298730 + Missense_Mutation SNP G G T novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . . NM_007204 exon1 c.G184T p.A62S GAGCCGGCCGACT 21 2 0.10 18 0 0 0 0 RFWD2 64326 mdanderson.org 37 1 176175758 176175758 + Silent SNP G G T novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . . NM_022457 exon1 c.C357A p.L119L GTTGCAGAGGGGG 34 3 0.09 24 0 0 6 0 0.00 PPP1R15B 84919 broad.mit.edu 37 1 204378635 204378636 + Frame_Shift_Del DEL AT AT - novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 AT AT Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . PPP1R15B NM_032833 exon1 c.1904_1905del p.635_635del TTTGACATGTGTG 103 8 0.08 83 0 0 67 9 0 0.00 DNAH14 127602 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 1 225539365 225539365 + Silent SNP T T C novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 T T Unknown Untested Somatic . WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . . NM_001373 exon70 c.T11034C p.G3678G AATAGGTGAAAGT 216 18 0.08 154 0 0 0 0 CNNM1 26507 mdanderson.org 37 10 101089191 101089191 + Missense_Mutation SNP G G T novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . . NM_020348 exon1 c.G47T p.R16L GGCTCCGGGACTG 24 3 0.13 22 0 0 0 0 MUC5B 727897 mdanderson.org 37 11 1258387 1258387 + Missense_Mutation SNP G G A rs202160055 TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 MUC5B,NS,carcinoma,+1,4 MUC5B NM_002458 exon25 c.G3290A p.R1097H CCTGCCGCTCCCA 26 3 0.12 15 1 0.0666666667 1 4 0 0 CCDC73 493860 mdanderson.org 37 11 32739692 32739692 + Missense_Mutation SNP T T A novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . . NM_001008391 exon3 c.G137T p.X46L TCTGCTTCCTAAG 40 3 0.08 28 0 0 0 0 TCN1 6947 hgsc.bcm.edu;mdanderson.org 37 11 59620746 59620746 + Missense_Mutation SNP C C A novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 TCN1,NS,carcinoma,-2,2 TCN1 NM_001062 exon8 c.G1170T p.Q390H TAGGCCCTGAATA 119 5 0.04 92 0 0 -2 2 2 0 0.00 MAML2 84441 broad.mit.edu 37 11 95825254 95825254 + Silent SNP C C T rs61749250 bycluster TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 MAML2,caecum,carcinoma,0,2 MAML2 NM_032427 exon2 c.G1941A p.Q647Q CTGCTGCTGTTGT 97 6 0.06 60 1 0.0166666667 94 2 0 0 FIGNL2 401720 mdanderson.org 37 12 52215308 52215308 + Missense_Mutation SNP G G T novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . . NM_001013690 exon2 c.C890A p.P297H GCGGCGGGGTAGG 15 2 0.13 8 0 0 0 0 WASH3P 0 broad.mit.edu 37 15 102506389 102506389 + RNA SNP C C T rs11858570 bycluster;byhapmap TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . WASH3P . . . . GCCCTGCAGTACC 48 6 0.13 20 0 0 56 14 0 0.00 MTSS1L 92154 mdanderson.org 37 16 70697713 70697713 + Missense_Mutation SNP G G T novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . . NM_138383 exon15 c.C2111A p.T704K TCCTCCGTGGGGG 19 2 0.11 17 0 0 1 0 0.00 HYDIN 54768 mdanderson.org 37 16 70972656 70972656 + Missense_Mutation SNP G G T novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 LOC652153,NS,carcinoma,0,4 LOC652153 NM_001270974 exon44 c.C6856A p.R2286S GCTTGCGTTCTGT 63 3 0.05 54 0 0 0 4 0 0 . 0 broad.mit.edu 37 17 20321835 20321836 + RNA INS - - A rs201907987 by1000genomes TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 - - Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . . . . . . AACAAACAAACAA 344 16 0.05 228 4 0.0175438596 0 0 MRPL45P2 0 broad.mit.edu 37 17 45567245 45567246 + RNA INS - - A novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 - - Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . . . . . . CCATCTCAAAAAA 10 3 0.30 4 0 0 0 0 PRKCSH 5589 hgsc.bcm.edu 37 19 11558370 11558370 + Silent SNP G G A rs77563879 bycluster TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 PRKCSH,caecum,carcinoma,0,1 PRKCSH NM_001001329 exon11 c.G966A p.E322E GGAGGAGGAAGAA 110 6 0.05 67 1 0.0149253731 0 1 4 0 0.00 TDRD12 91646 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 33247972 33247972 + Silent SNP A A G novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 A A Unknown Untested Somatic . WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . . NM_001110822 exon8 c.A801G p.Q267Q GGCACAATCTCTG 404 32 0.08 313 0 0 25 11 0.44 IGSF23 147710 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 19 45130819 45130819 + Missense_Mutation SNP G G A novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . . NM_001205280 exon3 c.G494A p.G165E TCCTGGGAGCCGG 227 10 0.04 178 0 0 0 0 MIR217 0 broad.mit.edu 37 2 56210467 56210467 + RNA DEL T T - novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . . . . . . AATAGCTTTTTAA 6 2 0.33 10 0 0 0 0 VRK2 7444 bcgsc.ca;mdanderson.org 37 2 58316777 58316777 + Silent SNP G G T novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 G G Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . VRK2 NM_001130480 exon7 c.G462T p.L154L TGTACTGGAATAT 553 13 0.02 407 0 0 46 8 1 0.13 rescued with RNA-seq VRK2 7444 broad.mit.edu;bcgsc.ca;mdanderson.org 37 2 58316816 58316816 + Missense_Mutation SNP A A G novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . VRK2 NM_001130480 exon7 c.A501G p.I167M TGATATAAAAGCA 629 16 0.03 458 0 0 46 15 1 0.07 rescued with RNA-seq ANKRD36BP2 0 broad.mit.edu 37 2 89104503 89104504 + RNA INS - - C rs149625899 bycluster;by1000genomes TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 - - Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . . . . . . ATTTTTTTCAGAT 17 9 0.53 6 0 0 0 0 DNAJC10 54431 bcgsc.ca;mdanderson.org 37 2 183582950 183582950 + Missense_Mutation SNP C C T novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 C C Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 DNAJC10,NS,malignant_melanoma,+1,1 DNAJC10 NM_001271581 exon3 c.C137T p.A46V AAACTGCAAGCAG 104 5 0.05 77 0 0 76 1 16 0 0.00 NCL 4691 hgsc.bcm.edu;broad.mit.edu 37 2 232325382 232325384 + In_Frame_Del DEL TCC TCC - novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 TCC TCC Unknown Untested Somatic . WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . NCL NM_005381 exon4 c.808_810del p.270_270del GTACCTTCCTCCT 196 16 0.08 142 0 0 80 215 0 0.00 SNORD119 100113378 hgsc.bcm.edu 37 20 2443617 2443617 + RNA SNP A A G novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 A A Unknown Untested Somatic . WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . . . . . . TCTCAGAGTAATC 68 4 0.06 38 0 0 1 0 0.00 PMEPA1 56937 broad.mit.edu 37 20 56284608 56284608 + Missense_Mutation SNP C C T novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . PMEPA1 NM_020182 exon1 c.G31A p.A11T CGGCGGCGGTGCT 134 4 0.03 98 0 0 29 1 0 0.00 ZNF831 128611 mdanderson.org 37 20 57766775 57766775 + Missense_Mutation SNP G G T novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . . NM_178457 exon1 c.G701T p.C234F GCAGGTGCCAGGG 56 3 0.05 37 0 0 0 0 LAMA5 3911 mdanderson.org 37 20 60886347 60886347 + Missense_Mutation SNP C C T novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . . NM_005560 exon73 c.G9959A p.R3320H GGCTGACGGCTGC 63 3 0.05 58 0 0 5 0 0.00 EEF1A2 1917 broad.mit.edu 37 20 62120282 62120282 + Missense_Mutation SNP T T G rs200931909 TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 EEF1A2,bladder,carcinoma,0,5 EEF1A2 NM_001958 exon7 c.A1253C p.Y418S GGCGGGTACTGGG 113 24 0.21 66 14 0.2121212121 60 5 7 0 0.00 BAGE 85319 broad.mit.edu 37 21 11064923 11064923 + RNA DEL G G - novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . . . . . . CCACTTGGGAGGC 6 2 0.33 5 0 0 0 0 . 0 broad.mit.edu 37 22 18842958 18842958 + RNA SNP G G T rs3875977 bycluster;byfrequency TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . . . . . . GAGGTGGCCTGGG 87 8 0.09 60 1 0.0166666667 0 0 FGD5 152273 mdanderson.org 37 3 14940334 14940334 + Splice_Site SNP G G T novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . . NM_152536 exon7 c.3154+1G>T . TCACAGGTGGGCC 52 3 0.06 39 0 0 0 0 SATB1 6304 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 3 18458414 18458414 + Missense_Mutation SNP C C T novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 SATB1,NS,carcinoma,-1,1 SATB1 NM_002971 exon3 c.G368A p.S123N GCAGAGCTATGTG 99 6 0.06 83 0 0 -1 1 4 0 0.00 STAB1 23166 mdanderson.org 37 3 52557097 52557097 + Missense_Mutation SNP G G T novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . . NM_015136 exon63 c.G6967T p.G2323W TGCAATGGGAAGC 46 3 0.07 57 0 0 9 0 0.00 TNIP2 79155 mdanderson.org 37 4 2749517 2749517 + Silent SNP G G A novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . . NM_024309 exon2 c.C432T p.C144C GGAGCGGCACAGG 42 3 0.07 54 0 0 8 0 0.00 KIT 3815 broad.mit.edu;bcgsc.ca 37 4 55593628 55593654 + In_Frame_Del DEL GAAACAATTATGTTTACATAGACCCAA GAAACAATTATGTTTACATAGACCCAA - novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 GAAACAATTATGTTTACATAGACCCAA GAAACAATTATGTTTACATAGACCCAA Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 KIT,caecum,carcinoma,+1,5 KIT NM_000222 exon11 c.1694_1720del p.565_574del TAAATGGAAACAA 158 8 0.05 126 0 0 7396 5 0 0 DSPP 1834 bcgsc.ca 37 4 88537036 88537036 + Silent SNP C C T rs367922244 TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 C C Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 DSPP,NS,carcinoma,0,1 DSPP NM_014208 exon5 c.C3222T p.D1074D CAGTGACAGCAGC 84 11 0.13 60 0 0 174 1 0 0 JMY 133746 mdanderson.org 37 5 78532852 78532852 + Missense_Mutation SNP C C T novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . . NM_152405 exon1 c.C379T p.R127W GACCCGCGGCTGC 39 3 0.08 21 0 0 0 0 SLC12A2 6558 broad.mit.edu 37 5 127420309 127420309 + Silent SNP G G T novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . SLC12A2 NM_001046 exon1 c.G663T p.V221V CGCTGTGCCCAGG 244 10 0.04 158 2 0.0126582278 119 9 0 0.00 SOGA3 387104 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 6 127804080 127804080 + Missense_Mutation SNP T T C novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 T T Unknown Untested Somatic . WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 C6orf174,right_upper_lobe,carcinoma,0,1 C6orf174 NM_001012279 exon5 c.A1535G p.K512R TGAGCCTTTTTTT 120 6 0.05 91 1 0.010989011 0 1 0 0 TBP 6908 broad.mit.edu;mdanderson.org 37 6 170871034 170871034 + Silent SNP G G A novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . TBP NM_003194 exon3 c.G210A p.Q70Q GCAGCAGCAGCAA 87 4 0.05 59 1 0.0169491525 58 6 0 0.00 MALSU1 115416 mdanderson.org 37 7 23349084 23349084 + Missense_Mutation SNP G G T novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . . NM_138446 exon4 c.G627T p.E209D ACCTGAGACAGTA 71 4 0.06 40 0 0 200 0 0.00 EPPK1 83481 hgsc.bcm.edu;bcgsc.ca;mdanderson.org 37 8 144940633 144940633 + Silent SNP C C T novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . . NM_031308 exon1 c.G6789A p.L2263L CGCCTCCAGCAGC 77 7 0.09 46 0 0 3 0 0.00 CDKN2A 1029 broad.mit.edu 37 9 21974753 21974753 + Missense_Mutation SNP A A C novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 CDKN2A_ENST00000498124,NS,carcinoma,0,3 CDKN2A NM_058197 exon1 c.T74G p.V25G TCCTCTACCCGAC 84 23 0.27 50 6 0.12 4810 3 1 0 0.00 DNAI1 27019 mdanderson.org 37 9 34483453 34483453 + Missense_Mutation SNP G G T novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . . NM_012144 exon2 c.G56T p.S19I GCATCAGCATAGG 47 3 0.06 33 0 0 0 0 INE1 8552 mdanderson.org 37 X 47065031 47065031 + RNA SNP G G T novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . . . . . . GCCGAGGTCTTTG 46 3 0.07 37 0 0 3 0 0.00 MAMLD1 10046 broad.mit.edu 37 X 149639635 149639635 + Missense_Mutation SNP A A T novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . MAMLD1 NM_005491 exon3 c.A1790T p.Q597L AGCTGCAGCAGCA 182 4 0.02 139 1 0.0071942446 263 0 0 AVPR2 0 broad.mit.edu 37 X 153171699 153171710 + In_Frame_Del DEL CGCCGCAGGGGA CGCCGCAGGGGA - novel TCGA-ZM-AA0F-01A-21D-A435-10 TCGA-ZM-AA0F-10A-01D-A438-10 CGCCGCAGGGGA CGCCGCAGGGGA Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 8a8a23d5-716d-4e90-ab83-cfa3c3eccdad 29ee93c7-6fcd-4a76-bc26-beaa899b9be9 . AVPR2 NM_001146151 exon2 c.739_750del p.247_250del GGGGGGCGCCGCA 71 12 0.17 50 0 0 43 0 0