Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov_SOL	TVarCov_SOL	TVaf_SOL	NTotCov_SOL	NVarCov_SOL	NVaf_SOL	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	Ttot_rna	Tvar_rna	Tvaf_rna	note	germline-maf-frequency	IGV
PARK7	11315	mdanderson.org	37	1	8037729	8037729	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_001123377	exon6	c.G340T	p.A114S	CTGTTGGCTCATG		40	3	0.08	65	0	0				950	0	0.00			
TMEM201	199953	mdanderson.org	37	1	9656058	9656058	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_001010866	exon2	c.G224A	p.G75D	ACAACGGCTTCCA		32	3	0.09	68	0	0				12	0	0.00			
TMEM51-AS1	200197	hgsc.bcm.edu	37	1	15439098	15439098	+	RNA	SNP	C	C	T	rs114844404	bycluster	TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	.	.	.	.	TTTTCTCCTCCCG		84	7	0.08	102	0	0				10	0	0.00			
EPHB2	2048	mdanderson.org	37	1	23111037	23111037	+	Silent	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_004442	exon3	c.G279T	p.S93S	GTTTTCGGTGCGT		52	3	0.06	80	0	0				5	0	0.00			
PHC2	1912	mdanderson.org	37	1	33796984	33796984	+	Silent	SNP	A	A	G	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	A	A					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	PHC2,colon,carcinoma,-2,1	PHC2	NM_198040	exon11	c.T1968C	p.R656R	CTTGGAACGCTTG		43	3	0.07	76	0	0		-2	1	29	0	0.00			
HIAT1	64645	broad.mit.edu	37	1	100525455	100525455	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	HIAT1,colon,carcinoma,-1,1	HIAT1	NM_033055	exon4	c.G265T	p.A89S	CTTAGTGCCCCGC		303	6	0.02	310	0	0		46	1	206	0	0.00			
NRAS	4893	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	115258747	115258747	+	Missense_Mutation	SNP	C	C	T	rs121913237	bycluster	TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	NRAS,NS,haematopoietic_neoplasm,0,861	NRAS	NM_002524	exon2	c.G35A	p.G12D	ACACCACCTGCTC		222	38	0.17	281	0	0		0	861	64	16	0.25			
CFHR3	10878	hgsc.bcm.edu	37	1	196759345	196759345	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	CFHR3,brain,primitive_neuroectodermal_tumour-medulloblastoma,-2,1	CFHR3	NM_021023	exon5	c.C784A	p.P262T	GAACCACCAAGAT		345	17	0.05	466	0	0		-2	1	0	0				
CFHR4	10877	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	1	196884256	196884256	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	CFHR4_ENST00000367416,right_lower_lobe,carcinoma,-1,2	CFHR4_ENST00000367416	NM_001201550	exon9	c.C1528A	p.P510T	GAACCACCAAGAT		699	93	0.13	881	0	0		-1	2	0	0				
PIK3C2B	5287	broad.mit.edu	37	1	204401431	204401431	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	PIK3C2B	NM_002646	exon28	c.C4052A	p.T1351N	GAGAGGGTCAGCC		154	6	0.04	178	0	0		142		43	0	0.00			
NUCKS1	64710	bcgsc.ca	37	1	205688682	205688686	+	Frame_Shift_Del	DEL	TTTTC	TTTTC	-	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	TTTTC	TTTTC					Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	NUCKS1	NM_022731	exon6	c.501_505del	p.167_169del	TGGGCATTTTCTT		244	5	0.02	276	1	0.0036231884		28		311	0	0.00			
SMYD2	56950	mdanderson.org	37	1	214491483	214491483	+	Splice_Site	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_020197	exon4	c.409+1G>T	.	AATCACGTAAGTC		51	3	0.06	62	0	0				0	0				
MCM10	55388	mdanderson.org	37	10	13240709	13240709	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_182751	exon16	c.G2143T	p.A715S	GAGCCTGCCAGGA		29	3	0.10	43	0	0				34	0	0.00			
FRMPD2	143162	mdanderson.org	37	10	49409307	49409307	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_001018071	exon15	c.C1918A	p.Q640K	CCATCTGTGCATT		63	4	0.06	99	0	0				0	0				
BTRC	8945	broad.mit.edu	37	10	103221770	103221770	+	Silent	SNP	C	C	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	BTRC	NM_033637	exon3	c.C189T	p.G63G	TAATGGCGAACCC		179	6	0.03	178	0	0		64		82	0	0.00			
PSD	5662	mdanderson.org	37	10	104176225	104176225	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	A	A					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_001270965	exon3	c.T571C	p.S191P	GGAGAGAGGAGTA		52	3	0.06	66	0	0				2	0	0.00			
MUC15	143662	mdanderson.org	37	11	26587436	26587436	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	A	A					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_001135092	exon3	c.T51A	p.F17L	TTTTTTAAAGGAA		45	3	0.07	63	0	0				0	0				
DAK	26007	mdanderson.org	37	11	61113862	61113862	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_015533	exon18	c.G1615T	p.A539S	ATGGAAGCTGGAG		33	3	0.09	44	0	0				47	0	0.00			
MIR192	406967	mdanderson.org	37	11	64658659	64658659	+	RNA	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	.	.	.	.	CCAGAGGGGAGAC		34	3	0.09	33	0	0				1	0	0.00			
SSH3	54961	mdanderson.org	37	11	67074580	67074580	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_017857	exon5	c.G532T	p.D178Y	GATGGAGACGGGT		27	3	0.11	26	0	0				2	0	0.00			
AAMDC	28971	broad.mit.edu	37	11	77580816	77580816	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_024684	exon3	c.G181T	p.G61C	GAGAAGGGTGTAC		150	5	0.03	215	0	0				68	0	0.00			
.	100131457	bcgsc.ca	37	11	85646423	85646423	+	RNA	SNP	C	C	A	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	.	.	.	.	ACAAGCCCATGAA		9	3	0.33	19	0	0				0	0				
FAT3	120114	mdanderson.org	37	11	92577510	92577510	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_001008781	exon18	c.G10977T	p.E3659D	CCCTGAGGACTTC		32	3	0.09	98	0	0				0	0				
GRIA4	2893	mdanderson.org	37	11	105481779	105481779	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	GRIA4_ENST00000393127,NS,carcinoma,0,3	GRIA4_ENST00000393127	NM_001077243	exon2	c.G55T	p.A19S	GGACTCGCCATGG		60	3	0.05	142	1	0.0070422535		0	3	0	0				
KRAS	3845	broad.mit.edu;bcgsc.ca;mdanderson.org	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	C	G	rs121913529	bycluster	TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	KRAS_ENST00000256078,NS,adenocarcinoma,0,25136	KRAS	NM_004985	exon2	c.G35C	p.G12A	ACGCCACCAGCTC		361	10	0.03	279	0	0		30930	25136	54	0	0.00			
SOAT2	8435	mdanderson.org	37	12	53497424	53497424	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_003578	exon1	c.G63T	p.E21D	GCGGGAGCGCCAA		27	3	0.11	25	0	0				0	0				
SLC24A6	80024	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	113770646	113770646	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_024959	exon2	c.G38A	p.S13N	AGCACACTCAGTG		69	20	0.29	80	0	0				48	13	0.27			
TPTE2	93492	bcgsc.ca	37	13	20056686	20056686	+	Missense_Mutation	SNP	T	T	C	rs201542496		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	T	T					Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	TPTE2	NM_199254	exon5	c.A121G	p.M41V	CTAACATACTTTA		510	15	0.03	688	6	0.0087209302		225		2	0	0.00			
ATP11A	23250	mdanderson.org	37	13	113526062	113526062	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_032189	exon26	c.G3005T	p.W1002L	GAAACTGGACGTT		49	3	0.06	107	0	0				9	0	0.00			
ZFYVE21	79038	mdanderson.org	37	14	104182264	104182264	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_024071	exon1	c.C86T	p.A29V	ACCGCGCCTTCGG		19	3	0.16	27	0	0				369	0	0.00			
ELL3	80237	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	44066684	44066684	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_025165	exon8	c.G856A	p.D286N	GGTAGTCTGGTAT		168	38	0.23	175	0	0				3	0	0.00			
ISLR2	57611	mdanderson.org	37	15	74426776	74426776	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_001130136	exon4	c.G1681T	p.G561C	CGGCCGGGTACCA		56	4	0.07	64	0	0				1	0	0.00			
WDR90	197335	mdanderson.org	37	16	717445	717445	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_145294	exon41	c.G5103T	p.R1701S	GCTGAGGCTGGTA		43	3	0.07	62	0	0				19	0	0.00			
ZSCAN10	84891	mdanderson.org	37	16	3142569	3142569	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_032805	exon1	c.C205T	p.R69W	GCTCCCGGTGGAT		19	2	0.11	38	1	0.0263157895				15	0	0.00			
FUS	2521	broad.mit.edu;bcgsc.ca	37	16	31202397	31202398	+	Frame_Shift_Del	DEL	AG	AG	-	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	AG	AG					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	FUS	NM_004960	exon14	c.1507_1508del	p.503_503del	GGGGACAGAGGTG		34	9	0.26	60	0	0		52		100	0	0.00			
TGFB1I1	7041	mdanderson.org	37	16	31484834	31484834	+	Missense_Mutation	SNP	C	C	T	rs142826505	byfrequency	TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_001042454	exon2	c.C86T	p.A29V	GCCCTGCGGAGCC		39	3	0.08	59	0	0	0			18	0	0.00			
CDH16	1014	mdanderson.org	37	16	66949135	66949135	+	Missense_Mutation	SNP	G	G	T	rs2271024	byfrequency;byhapmap;alternate_allele	TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_004062	exon6	c.C571A	p.L191I	GGCTGAGGGCCAG		31	3	0.10	44	0	0				0	0				
FBXO31	79791	mdanderson.org	37	16	87369022	87369022	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	FBXO31_ENST00000311635,NS,carcinoma,-1,2	FBXO31_ENST00000311635	NM_024735	exon7	c.G884A	p.R295H	TCGGGGCGGCTGG		43	3	0.07	112	0	0		-1	2	63	0	0.00			
C17orf97	400566	bcgsc.ca	37	17	263726	263726	+	Silent	SNP	C	C	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	C17orf97	NM_001013672	exon2	c.C1092T	p.G364G	CAAGGGCTTCCAC		277	15	0.05	350	7	0.02		76		43	1	0.02			
SGK494	0	mdanderson.org	37	17	26941125	26941125	+	Silent	SNP	G	G	T	rs143987420	alternate_allele	TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_001174103	exon1	c.C55A	p.R19R	CCACCCGGGTGTG		33	3	0.09	48	0	0				41	0	0.00			
TTYH2	94015	mdanderson.org	37	17	72218737	72218737	+	Silent	SNP	C	C	A	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_032646	exon2	c.C243A	p.T81T	GCAGACCAAGCAG		37	3	0.08	48	0	0				16	0	0.00			
KCTD2	23510	mdanderson.org	37	17	73043556	73043556	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_015353	exon1	c.G211A	p.A71T	GGCGCGGCCCGCT		22	3	0.14	25	0	0				18	0	0.00			
PLIN3	10226	broad.mit.edu	37	19	4839419	4839419	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	PLIN3	NM_005817	exon8	c.C1090A	p.R364S	CCTGGCGGCGGGC		113	4	0.04	125	0	0		36		193	0	0.00			
ZNF763	284390	mdanderson.org	37	19	12089265	12089265	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	ZNF763,NS,carcinoma,0,2	ZNF763	NM_001012753	exon4	c.G535T	p.E179X	TGTAAAGAATGTG		100	5	0.05	122	0	0		0	2	4	0	0.00			
FCGBP	8857	mdanderson.org	37	19	40421328	40421328	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_003890	exon5	c.C2593A	p.Q865K	ACCCCTGGCAGGT		53	3	0.06	77	0	0				4	0	0.00			
CEACAM5	1048	mdanderson.org	37	19	42212685	42212685	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_004363	exon1	c.G35A	p.C12Y	GATGGTGCATCCC		37	3	0.08	66	0	0				0	0				
ZNF649	65251	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	52394804	52394804	+	Silent	SNP	C	C	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	ZNF649	NM_023074	exon5	c.G585A	p.E195E	CTTATGCTCAGTG		167	38	0.23	234	1	0.0042735043		72		90	34	0.38			
ZNF836	162962	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	52658148	52658148	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_001102657	exon5	c.C2788G	p.L930V	TTAGGAGAACATC		94	22	0.23	112	0	0				25	14	0.56			
ZNF776	284309	mdanderson.org	37	19	58265468	58265468	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_173632	exon3	c.G970T	p.E324X	TGTGACGAATGTG		52	3	0.06	81	0	0				42	0	0.00			
OTOF	9381	mdanderson.org	37	2	26690000	26690000	+	Silent	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_194248	exon35	c.C4329A	p.S1443S	CTCGGTGGAGCCA		35	3	0.09	30	1	0.0333333333				4	0	0.00			
COL5A2	1290	mdanderson.org	37	2	189927992	189927992	+	Missense_Mutation	SNP	G	G	A	rs145169816	bycluster;by1000genomes;alternate_allele	TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	COL5A2,NS,carcinoma,+1,2	COL5A2	NM_000393	exon27	c.C1775T	p.A592V	CCTGGCGCACCCT		38	3	0.08	32	0	0		1	2	14	0	0.00			
CPXM1	56265	mdanderson.org	37	20	2781176	2781176	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_001184699	exon1	c.G43A	p.V15I	GGCCGACGGCCGG		10	2	0.20	14	0	0				9	0	0.00			
.	388795	bcgsc.ca	37	20	31547966	31547966	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	A	A					Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	.	.	.	.	AGCATCAGGTAAG		176	6	0.03	208	1	0.0048076923				0	0				
KCNS1	3787	mdanderson.org	37	20	43726516	43726516	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_002251	exon4	c.C897A	p.N299K	GAAGAAGTTGCGC		39	3	0.08	53	0	0				19	0	0.00			
NCOA5	57727	mdanderson.org	37	20	44690957	44690957	+	Silent	SNP	A	A	G	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	A	A					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_020967	exon8	c.T1722C	p.S574S	CTGGTAAGATCCC		51	3	0.06	63	0	0				120	0	0.00			
ADARB1	104	broad.mit.edu;bcgsc.ca;mdanderson.org	37	21	46604964	46604964	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	ADARB1	NM_015834	exon9	c.G1643C	p.G548A	TGCAAGGGGAGCG		101	5	0.05	77	0	0		81		7	0	0.00			
CSF2RB	1439	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	37326718	37326718	+	Silent	SNP	G	G	A	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_000395	exon8	c.G858A	p.E286E	CAGGGAGGAAGAG		45	21	0.47	67	0	0				2	1	0.50			
EP300	2033	broad.mit.edu	37	22	41531831	41531831	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	EP300,NS,carcinoma,0,1	EP300	NM_001429	exon7	c.G1543T	p.G515X	CCTATGGGAGTAA		249	4	0.02	263	0	0		367	1	77	0	0.00			
CSDC2	27254	broad.mit.edu	37	22	41968126	41968126	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	CSDC2	NM_014460	exon2	c.C157T	p.R53W	ACCAAGCGGACCA		232	5	0.02	252	0	0		15		1	0	0.00			
TPRXL	0	broad.mit.edu	37	3	14106026	14106037	+	In_Frame_Del	DEL	CCAGCAGTAGCT	CCAGCAGTAGCT	-	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	CCAGCAGTAGCT	CCAGCAGTAGCT					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	TPRXL	.	.	.	.	GCAGCCCCAGCAG		6	2	0.33	5	0	0		10		0	0				
ADAMTS9	56999	mdanderson.org	37	3	64633628	64633628	+	Silent	SNP	G	G	A	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_182920	exon11	c.C1698T	p.C566C	AGGCTCGCACTCC		41	3	0.07	64	0	0				0	0				
LRIT3	345193	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	4	110788886	110788886	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_198506	exon3	c.G679T	p.D227Y	CTTCTGGATCCAC		82	6	0.07	157	0	0				0	0				
PCDHA6	56142	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	140208298	140208298	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_018909	exon1	c.C622T	p.H208Y	CCTGCACACAACT		119	26	0.22	161	0	0				1	1	1.00			
PPP2R2B	5521	hgsc.bcm.edu	37	5	146017851	146017851	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_181675	exon7	c.C1071A	p.D357E	CCGCATGTCACAC		89	4	0.04	117	0	0				2	0	0.00			
F12	2161	bcgsc.ca;mdanderson.org	37	5	176836088	176836088	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	F12	NM_000505	exon2	c.C74A	p.A25D	TTGGGGGCTTCCC		65	5	0.08	110	0	0		35		0	0				
ECI2	10455	broad.mit.edu	37	6	4133832	4133832	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	T	T					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	ECI2_ENST00000380118,NS,malignant_melanoma,0,2	ECI2	NM_206836	exon2	c.A164G	p.K55R	GGATCCTTTTTCA		110	3	0.03	176	0	0		59	2	182	0	0.00			
BTN2A2	10385	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	26385530	26385530	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	BTN2A2_ENST00000432533,colon,carcinoma,-1,2	BTN2A2_ENST00000432533	NM_001197238	exon3	c.C382A	p.R128S	ATCTACCGCTGTT		117	22	0.19	128	0	0		-1	2	6	1	0.17			
PPP2R5D	5528	broad.mit.edu	37	6	42974822	42974822	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	PPP2R5D	NM_006245	exon4	c.G496T	p.A166S	ACTGAGGCCATTT		91	4	0.04	137	0	0		47		100	0	0.00			
MTO1	25821	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	74171583	74171583	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_133645	exon1	c.C6G	p.F2L	CATGTTCTACTTC		181	43	0.24	242	0	0				48	18	0.38			
AQP1	358	broad.mit.edu	37	7	30963100	30963100	+	Silent	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	AQP1	NM_198098	exon4	c.G666T	p.L222L	AGCCCTGGCTGTA		213	4	0.02	154	0	0		38		94	0	0.00			
DDC	1644	mdanderson.org	37	7	50544328	50544328	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_001082971	exon11	c.C1035A	p.D345E	CCGGTAGTCAGTG		40	3	0.08	31	0	0				0	0				
SCARA5	286133	mdanderson.org	37	8	27779486	27779486	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_173833	exon4	c.G518A	p.R173H	CCCGTGCGGTCCC		17	3	0.18	22	0	0				0	0				
OTUD6B	51633	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	8	92096281	92096284	+	Frame_Shift_Del	DEL	CAGG	CAGG	-	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	CAGG	CAGG					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	OTUD6B	NM_016023	exon6	c.825_828del	p.275_276del	ATAATACAGGCAG		320	0	0.00	332	0	0		28		36	0	0.00			
RBM12B	389677	broad.mit.edu;bcgsc.ca;mdanderson.org	37	8	94746362	94746362	+	Silent	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	RBM12B	NM_203390	exon3	c.C2277A	p.P759P	CTCTGGGGGTGGC		76	5	0.07	93	0	0		78		67	0	0.00			
COL14A1	7373	broad.mit.edu	37	8	121219207	121219207	+	Silent	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	COL14A1	NM_021110	exon10	c.G1065T	p.P355P	TGGGCCGCCTACG		130	5	0.04	116	0	0		292		5	0	0.00			
PCSK5	5125	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	9	78973480	78973480	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	A	A					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_001190482	exon37	c.A5225G	p.K1742R	ATTTCAAGACAGC		259	12	0.05	301	0	0				4	0	0.00			
CENPP	401541	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	95094481	95094481	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	A	A					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_001012267	exon2	c.A137G	p.N46S	AATTCAATTTGGA		165	27	0.16	202	0	0				23	8	0.35			
CARD9	64170	mdanderson.org	37	9	139262098	139262098	+	Silent	SNP	C	C	T	rs142757984		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_052813	exon8	c.G1260A	p.T420T	GACGAGCGTCTCC		30	3	0.10	17	0	0	0			1	0	0.00			
ND5	0	hgsc.bcm.edu	37	MT	13928	13928	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	ENST00000361567	exon1	c.G1592A	p.S531N	ACCCTAGCATCAC		8	7	0.88	10	0	0				0	0				
MAOA	4128	mdanderson.org	37	X	43603153	43603153	+	Splice_Site	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_001270458	exon14	c.975+1G>T	.	AGGGAGGTAAGCA		35	3	0.09	65	0	0				1	0	0.00			
FAM104B	90736	mdanderson.org	37	X	55172718	55172718	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_001166700	exon3	c.C150A	p.S50R	GCTGCTGCTCCTT		39	3	0.08	28	0	0				95	0	0.00			
.	100129994	bcgsc.ca	37	X	63918044	63918044	+	RNA	SNP	C	C	A	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	.	.	.	.	ATTCTTCAGAAAT		20	4	0.20	23	0	0				1	0	0.00			
MPP1	4354	mdanderson.org	37	X	154020464	154020464	+	Silent	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	NM_002436	exon2	c.C199A	p.R67R	CTTTCCGCACCTC		98	5	0.05	82	0	0				19	0	0.00			
.	0	bcgsc.ca	37	Y	23005328	23005328	+	RNA	SNP	C	C	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	.	.	.	.	GGTGTCCGCCTGA		23	12	0.52	46	0	0				0	0				
DNM1	1759	mdanderson.org	37	9	130965862	130965862	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-SB-A76C-01A-11D-A435-10	TCGA-SB-A76C-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93ef8c47-511c-41fd-af49-9f0490f4eabf	bfa61308-ebae-4b8c-acd3-b5cc89318427	.	.	.	.	.	.	TGGTGGGCGGCCA		29	3	0.10	31	0	0				8	0	0.00