Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID CARD11 84433 hgsc.bcm.edu 36 7 2929479 2929479 + Missense_Mutation SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 PMS2 5395 hgsc.bcm.edu 36 7 5993142 5993142 + Silent SNP A A G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 ANKMY2 57037 hgsc.bcm.edu 36 7 16615862 16615862 + Missense_Mutation SNP A A G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 DNAH11 8701 hgsc.bcm.edu 36 7 21732082 21732082 + Missense_Mutation SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 FAM126A 84668 hgsc.bcm.edu 36 7 22966467 22966467 + Silent SNP A A C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 STX1A 6804 hgsc.bcm.edu 36 7 72755201 72755201 + Missense_Mutation SNP C C A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 CACNA2D1 781 hgsc.bcm.edu 36 7 81439112 81439112 + Silent SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 BRI3 81618 hgsc.bcm.edu 36 7 97758482 97758482 + Silent SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 SLC26A4 5172 hgsc.bcm.edu 36 7 107129652 107129652 + Missense_Mutation SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 KCND2 3751 hgsc.bcm.edu 36 7 119702836 119702836 + Missense_Mutation SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 FEZF1 389549 hgsc.bcm.edu 36 7 121731099 121731099 + Missense_Mutation SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 IQUB 154865 hgsc.bcm.edu 36 7 122939601 122939601 + Silent SNP A A G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 AKR1B1 231 hgsc.bcm.edu 36 7 133785035 133785035 + Missense_Mutation SNP T T A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 TAS2R5 54429 hgsc.bcm.edu 36 7 141136721 141136721 + Missense_Mutation SNP A A C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 GIMAP8 155038 hgsc.bcm.edu 36 7 149805214 149805214 + Missense_Mutation SNP C C A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 PDYN 5173 hgsc.bcm.edu 36 20 1909100 1909100 + Missense_Mutation SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 TGM6 343641 hgsc.bcm.edu 36 20 2345925 2345925 + Missense_Mutation SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 KIF16B 55614 hgsc.bcm.edu 36 20 16422981 16422981 + Silent SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 MYL9 10398 hgsc.bcm.edu 36 20 34610898 34610898 + Missense_Mutation SNP C C A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 ZMYND8 23613 hgsc.bcm.edu 36 20 45283470 45283470 + Nonsense_Mutation SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 CBLN4 140689 hgsc.bcm.edu 36 20 54012483 54012483 + Missense_Mutation SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 ADRBK2 157 hgsc.bcm.edu 36 22 24444292 24444292 + Missense_Mutation SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 TTC28 23331 hgsc.bcm.edu 36 22 26833861 26833861 + Missense_Mutation SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 NF2 4771 hgsc.bcm.edu 36 22 28368259 28368259 + Nonsense_Mutation SNP C C A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 APOBEC3C 27350 hgsc.bcm.edu 36 22 37741694 37741694 + Nonsense_Mutation SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 PDGFB 5155 hgsc.bcm.edu 36 22 37951702 37951702 + Missense_Mutation SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 LTB4R2 56413 hgsc.bcm.edu 36 14 23850730 23850730 + Silent SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 C14orf49 161176 hgsc.bcm.edu 36 14 94991704 94991704 + Silent SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 BCL11B 64919 hgsc.bcm.edu 36 14 98712209 98712209 + Silent SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 RTL1 388015 hgsc.bcm.edu 36 14 100419607 100419607 + Silent SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 TMPRSS9 360200 hgsc.bcm.edu 36 19 2364777 2364777 + Missense_Mutation SNP G G C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 XAB2 56949 hgsc.bcm.edu 36 19 7591874 7591874 + Missense_Mutation SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 MUC16 94025 hgsc.bcm.edu 36 19 8935564 8935564 + Silent SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 MUC16 94025 hgsc.bcm.edu 36 19 8948432 8948432 + Silent SNP C C A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 ZNF536 9745 hgsc.bcm.edu 36 19 35626726 35626726 + Silent SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 UBA2 10054 hgsc.bcm.edu 36 19 39626644 39626644 + Missense_Mutation SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 MEGF8 1954 hgsc.bcm.edu 36 19 47555187 47555187 + Missense_Mutation SNP T T G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 SIGLEC5 8778 hgsc.bcm.edu 36 19 56822734 56822734 + Missense_Mutation SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 NLRP12 91662 hgsc.bcm.edu 36 19 59005210 59005210 + Missense_Mutation SNP G G T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 PEG3 5178 hgsc.bcm.edu 36 19 62017407 62017407 + Missense_Mutation SNP T T G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 CSMD1 64478 hgsc.bcm.edu 36 8 2951470 2951470 + Missense_Mutation SNP G G C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 PRSS55 0 hgsc.bcm.edu 36 8 10433419 10433419 + Silent SNP C C A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 ADAM28 10863 hgsc.bcm.edu 36 8 24248941 24248941 + Missense_Mutation SNP A A G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 ADRB3 155 hgsc.bcm.edu 36 8 37942834 37942834 + Missense_Mutation SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 DPYS 1807 hgsc.bcm.edu 36 8 105528873 105528873 + Missense_Mutation SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 GLI4 2738 hgsc.bcm.edu 36 8 144423054 144423054 + Missense_Mutation SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 ADCK5 203054 hgsc.bcm.edu 36 8 145589019 145589019 + Silent SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 USP24 23358 hgsc.bcm.edu 36 1 55385221 55385221 + Missense_Mutation SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 FGGY 55277 hgsc.bcm.edu 36 1 59584642 59584642 + Missense_Mutation SNP T T G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 NEXN 91624 hgsc.bcm.edu 36 1 78156488 78156488 + Missense_Mutation SNP A A G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 PTGFR 5737 hgsc.bcm.edu 36 1 78731445 78731445 + Silent SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 NBPF10 100132406 hgsc.bcm.edu 36 1 144035013 144035013 + Missense_Mutation SNP A A T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 RORC 6097 hgsc.bcm.edu 36 1 150055833 150055833 + Missense_Mutation SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 FLG 2312 hgsc.bcm.edu 36 1 150543923 150543923 + Missense_Mutation SNP C C G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 INSRR 3645 hgsc.bcm.edu 36 1 155090386 155090386 + Missense_Mutation SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 CD1A 913 hgsc.bcm.edu 36 1 156493385 156493385 + Missense_Mutation SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 DPT 1805 hgsc.bcm.edu 36 1 166950152 166950152 + Missense_Mutation SNP T T A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 DPT 1805 hgsc.bcm.edu 36 1 166950153 166950153 + Nonsense_Mutation SNP C C A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 SLC9A11 284525 hgsc.bcm.edu 36 1 171812447 171812447 + Missense_Mutation SNP G G T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 CENPF 1063 hgsc.bcm.edu 36 1 212862097 212862097 + Silent SNP A A G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 OBSCN 84033 hgsc.bcm.edu 36 1 226593229 226593229 + Nonsense_Mutation SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 TRIM67 440730 hgsc.bcm.edu 36 1 229409062 229409062 + Silent SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 ACTN2 88 hgsc.bcm.edu 36 1 234916638 234916638 + Nonsense_Mutation SNP C C G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 MUC5B 727897 hgsc.bcm.edu 36 11 1217694 1217694 + Missense_Mutation SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 OR52I2 143502 hgsc.bcm.edu 36 11 4564826 4564826 + Missense_Mutation SNP T T G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 OR51F2 119694 hgsc.bcm.edu 36 11 4800139 4800139 + Silent SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 C11orf41 25758 hgsc.bcm.edu 36 11 33646138 33646138 + Silent SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 OR5D18 219438 hgsc.bcm.edu 36 11 55343865 55343865 + Missense_Mutation SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 STX5 6811 hgsc.bcm.edu 36 11 62351639 62351639 + Missense_Mutation SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 RELA 5970 hgsc.bcm.edu 36 11 65183752 65183752 + Missense_Mutation SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 ATM 472 hgsc.bcm.edu 36 11 107603563 107603563 + Missense_Mutation SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 OPCML 4978 hgsc.bcm.edu 36 11 132032262 132032262 + Missense_Mutation SNP T T G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 HUS1B 135458 hgsc.bcm.edu 36 6 601918 601918 + Silent SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 RREB1 6239 hgsc.bcm.edu 36 6 7193753 7193753 + Silent SNP A A G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 HIST1H4I 8294 hgsc.bcm.edu 36 6 27215334 27215334 + Missense_Mutation SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 BAI3 577 hgsc.bcm.edu 36 6 70105558 70105558 + Missense_Mutation SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 FILIP1 27145 hgsc.bcm.edu 36 6 76129301 76129301 + Missense_Mutation SNP A A C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 MCHR2 84539 hgsc.bcm.edu 36 6 100510705 100510705 + Missense_Mutation SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 FAM184A 79632 hgsc.bcm.edu 36 6 119343134 119343134 + Silent SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 TRMT11 60487 hgsc.bcm.edu 36 6 126358864 126358864 + Missense_Mutation SNP G G T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 MYB 4602 hgsc.bcm.edu 36 6 135562960 135562960 + Missense_Mutation SNP C C G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 TAB2 23118 hgsc.bcm.edu 36 6 149732899 149732899 + Missense_Mutation SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 RSPH3 83861 hgsc.bcm.edu 36 6 159321911 159321911 + Missense_Mutation SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 FNDC1 84624 hgsc.bcm.edu 36 6 159572951 159572951 + Missense_Mutation SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 FNDC1 84624 hgsc.bcm.edu 36 6 159580570 159580570 + Silent SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 TP53 7157 hgsc.bcm.edu 36 17 7520086 7520086 + Missense_Mutation SNP A A C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 MYH1 4619 hgsc.bcm.edu 36 17 10348990 10348990 + Silent SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 DNAH9 1770 hgsc.bcm.edu 36 17 11523917 11523917 + Missense_Mutation SNP C C T rs8070501 byCluster;byFrequency;byHapMap TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 PIGS 94005 hgsc.bcm.edu 36 17 23911288 23911288 + Missense_Mutation SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 NF1 4763 hgsc.bcm.edu 36 17 26587108 26587108 + Missense_Mutation SNP G G T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 CD79B 974 hgsc.bcm.edu 36 17 59363339 59363339 + Silent SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 QRICH2 84074 hgsc.bcm.edu 36 17 71800330 71800330 + Silent SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 TPTE 7179 hgsc.bcm.edu 36 21 9956837 9956837 + Missense_Mutation SNP C C G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 KRTAP24-1 643803 hgsc.bcm.edu 36 21 30576966 30576966 + Missense_Mutation SNP T T G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 E4F1 1877 hgsc.bcm.edu 36 16 2222784 2222784 + Missense_Mutation SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 CREBBP 1387 hgsc.bcm.edu 36 16 3726079 3726079 + Missense_Mutation SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 GRIN2A 2903 hgsc.bcm.edu 36 16 9939398 9939398 + Missense_Mutation SNP T T G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 GPR139 124274 hgsc.bcm.edu 36 16 19950952 19950952 + Missense_Mutation SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 PRKCB 5579 hgsc.bcm.edu 36 16 23954271 23954271 + Missense_Mutation SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 SPN 10522 hgsc.bcm.edu 36 16 29582599 29582599 + Missense_Mutation SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 CMTM1 113540 hgsc.bcm.edu 36 16 65168600 65168600 + Silent SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 CMTM2 146225 hgsc.bcm.edu 36 16 65178427 65178427 + Silent SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 LHFPL4 375612 hgsc.bcm.edu 36 3 9522828 9522828 + Missense_Mutation SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 C3orf20 84077 hgsc.bcm.edu 36 3 14743418 14743418 + Missense_Mutation SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 ANKRD28 23243 hgsc.bcm.edu 36 3 15702741 15702741 + Silent SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 PRICKLE2 166336 hgsc.bcm.edu 36 3 64108101 64108101 + Missense_Mutation SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 WDR5B 54554 hgsc.bcm.edu 36 3 123616203 123616203 + Missense_Mutation SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 EPHB1 2047 hgsc.bcm.edu 36 3 136153307 136153307 + Silent SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 HPS3 84343 hgsc.bcm.edu 36 3 150368382 150368382 + Missense_Mutation SNP A A G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 PLCH1 23007 hgsc.bcm.edu 36 3 156750295 156750295 + Missense_Mutation SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 WDR49 151790 hgsc.bcm.edu 36 3 168728489 168728489 + Missense_Mutation SNP A A C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 PIK3CA 5290 hgsc.bcm.edu 36 3 180418744 180418744 + Missense_Mutation SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 PIK3CA 5290 hgsc.bcm.edu 36 3 180421629 180421629 + Missense_Mutation SNP A A G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 PIK3CA 5290 hgsc.bcm.edu 36 3 180434661 180434661 + Missense_Mutation SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 FXR1 8087 hgsc.bcm.edu 36 3 182151848 182151848 + Silent SNP A A G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 EIF4A2 1974 hgsc.bcm.edu 36 3 187986671 187986671 + Missense_Mutation SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 AKAP3 10566 hgsc.bcm.edu 36 12 4595274 4595274 + Silent SNP G G T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 CHD4 1108 hgsc.bcm.edu 36 12 6561155 6561155 + Silent SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 C1RL 51279 hgsc.bcm.edu 36 12 7140135 7140135 + Missense_Mutation SNP C C A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 PRB1 5933 hgsc.bcm.edu 36 12 11397917 11397917 + Silent SNP A A C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 KRT3 3850 hgsc.bcm.edu 36 12 51475952 51475952 + Missense_Mutation SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 ESYT1 23344 hgsc.bcm.edu 36 12 54817622 54817622 + Missense_Mutation SNP A A G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 NAP1L1 4673 hgsc.bcm.edu 36 12 74733341 74733341 + Missense_Mutation SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 CCDC38 120935 hgsc.bcm.edu 36 12 94824356 94824356 + Silent SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 ACTR6 64431 hgsc.bcm.edu 36 12 99141737 99141737 + Silent SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 IFT81 28981 hgsc.bcm.edu 36 12 109065709 109065709 + Silent SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 TRAFD1 10906 hgsc.bcm.edu 36 12 111063024 111063024 + Missense_Mutation SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 PTPN11 5781 hgsc.bcm.edu 36 12 111399906 111399906 + Missense_Mutation SNP A A G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 IQCD 115811 hgsc.bcm.edu 36 12 112129789 112129789 + Missense_Mutation SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 TMEM132B 114795 hgsc.bcm.edu 36 12 124702981 124702981 + Silent SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 MMP17 4326 hgsc.bcm.edu 36 12 130901571 130901571 + Silent SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 OR4N4 283694 hgsc.bcm.edu 36 15 19883886 19883886 + Missense_Mutation SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 MGA 23269 hgsc.bcm.edu 36 15 39829995 39829995 + Missense_Mutation SNP G G C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 CATSPER2 117155 hgsc.bcm.edu 36 15 41727460 41727460 + Missense_Mutation SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 TMOD3 29766 hgsc.bcm.edu 36 15 49968621 49968621 + Silent SNP A A G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 TMC3 342125 hgsc.bcm.edu 36 15 79412370 79412370 + Silent SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 MEF2A 4205 hgsc.bcm.edu 36 15 98029303 98029303 + Missense_Mutation SNP A A G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 WWC3 55841 hgsc.bcm.edu 36 X 10066966 10066966 + Missense_Mutation SNP C C A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 PHEX 5251 hgsc.bcm.edu 36 X 22018492 22018492 + Missense_Mutation SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 OTC 5009 hgsc.bcm.edu 36 X 38096919 38096919 + Nonsense_Mutation SNP T T A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 SMARCA1 6594 hgsc.bcm.edu 36 X 128442450 128442450 + Missense_Mutation SNP G G C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 MFSD7 84179 hgsc.bcm.edu 36 4 668565 668565 + Silent SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 FAM193A 0 hgsc.bcm.edu 36 4 2668058 2668058 + Silent SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 GPR125 166647 hgsc.bcm.edu 36 4 22072522 22072522 + Nonsense_Mutation SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 FIP1L1 81608 hgsc.bcm.edu 36 4 53951540 53951540 + Missense_Mutation SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 AASDH 132949 hgsc.bcm.edu 36 4 56915638 56915638 + Missense_Mutation SNP T T G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 DSPP 1834 hgsc.bcm.edu 36 4 88756407 88756407 + Missense_Mutation SNP G G T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 BMPR1B 658 hgsc.bcm.edu 36 4 96270125 96270125 + Silent SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 KIAA1109 84162 hgsc.bcm.edu 36 4 123351631 123351631 + Silent SNP A A G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 MMAA 387254 hgsc.bcm.edu 36 4 146794599 146794599 + Missense_Mutation SNP A A G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 APOB 338 hgsc.bcm.edu 36 2 21082573 21082573 + Missense_Mutation SNP G G A rs12713559 byCluster;byHapMap TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 ASXL2 55252 hgsc.bcm.edu 36 2 25835890 25835890 + Nonsense_Mutation SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 ALK 238 hgsc.bcm.edu 36 2 29793951 29793951 + Missense_Mutation SNP A A G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 PUS10 150962 hgsc.bcm.edu 36 2 61033720 61033720 + Silent SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 BMP10 27302 hgsc.bcm.edu 36 2 68947020 68947020 + Silent SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 BMP10 27302 hgsc.bcm.edu 36 2 68947021 68947021 + Missense_Mutation SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 GMCL1 64395 hgsc.bcm.edu 36 2 69935489 69935489 + Missense_Mutation SNP A A G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 CLEC4F 165530 hgsc.bcm.edu 36 2 70897328 70897328 + Silent SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 SLC4A5 57835 hgsc.bcm.edu 36 2 74385307 74385307 + Missense_Mutation SNP G G T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 DDX18 8886 hgsc.bcm.edu 36 2 118296032 118296032 + Silent SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 OSBPL6 114880 hgsc.bcm.edu 36 2 178879180 178879180 + Missense_Mutation SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 TTN 7273 hgsc.bcm.edu 36 2 179146571 179146571 + Missense_Mutation SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 TTN 7273 hgsc.bcm.edu 36 2 179183182 179183182 + Missense_Mutation SNP A A G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 TTN 7273 hgsc.bcm.edu 36 2 179332092 179332092 + Missense_Mutation SNP G G T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 ZDBF2 57683 hgsc.bcm.edu 36 2 206881095 206881095 + Missense_Mutation SNP A A C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 MAP2 10988 hgsc.bcm.edu 36 2 210283162 210283162 + Missense_Mutation SNP A A G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 LRRFIP1 9208 hgsc.bcm.edu 36 2 238337068 238337068 + Missense_Mutation SNP A A G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 VLDLR 7436 hgsc.bcm.edu 36 9 2631486 2631486 + Silent SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 ERMP1 79956 hgsc.bcm.edu 36 9 5791200 5791200 + Silent SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 PTCH1 5727 hgsc.bcm.edu 36 9 97284111 97284111 + Silent SNP A A G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 NEK6 10783 hgsc.bcm.edu 36 9 126123580 126123580 + Missense_Mutation SNP A A G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 ASS1 445 hgsc.bcm.edu 36 9 132336080 132336080 + Silent SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 RNF6 6049 hgsc.bcm.edu 36 13 25686761 25686761 + Nonsense_Mutation SNP T T A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 FLT3 2322 hgsc.bcm.edu 36 13 27506472 27506472 + Missense_Mutation SNP A A G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 BRCA2 675 hgsc.bcm.edu 36 13 31811536 31811536 + Missense_Mutation SNP A A G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 DIAPH3 81624 hgsc.bcm.edu 36 13 59305365 59305365 + Silent SNP C C A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 ERCC5 2073 hgsc.bcm.edu 36 13 102316118 102316118 + Silent SNP G G C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 VIM 7431 hgsc.bcm.edu 36 10 17311986 17311986 + Missense_Mutation SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 ABI1 10006 hgsc.bcm.edu 36 10 27106147 27106147 + Silent SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 ITGB1 3688 hgsc.bcm.edu 36 10 33249239 33249239 + Silent SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 NRP1 8829 hgsc.bcm.edu 36 10 33542456 33542456 + Missense_Mutation SNP T T G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 FRMPD2 143162 hgsc.bcm.edu 36 10 49079396 49079396 + Missense_Mutation SNP T T G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 ASAH2 56624 hgsc.bcm.edu 36 10 51675174 51675174 + Silent SNP G G T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 ASAH2 56624 hgsc.bcm.edu 36 10 51675175 51675175 + Missense_Mutation SNP G G T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 COX15 1355 hgsc.bcm.edu 36 10 101477239 101477239 + Missense_Mutation SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 PKD2L1 9033 hgsc.bcm.edu 36 10 102079782 102079782 + Silent SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 CALHM2 51063 hgsc.bcm.edu 36 10 105199506 105199506 + Silent SNP G G A novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 ADCY2 108 hgsc.bcm.edu 36 5 7679421 7679421 + Missense_Mutation SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 MCTP1 79772 hgsc.bcm.edu 36 5 94270719 94270719 + Missense_Mutation SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 APC 324 hgsc.bcm.edu 36 5 112179103 112179103 + Nonsense_Mutation SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 APC 324 hgsc.bcm.edu 36 5 112203406 112203406 + Nonsense_Mutation SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 PCDHA9 9752 hgsc.bcm.edu 36 5 140209806 140209806 + Silent SNP C C T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 DOCK2 1794 hgsc.bcm.edu 36 5 169378599 169378599 + Missense_Mutation SNP T T G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 ZNF879 0 hgsc.bcm.edu 36 5 178391849 178391849 + Missense_Mutation SNP A A T novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 MGAT1 116255 hgsc.bcm.edu 36 5 180151589 180151589 + Missense_Mutation SNP T T C novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 CDH1 51343 hgsc.bcm.edu 36 16 67403537 67403537 + Splice_Site SNP A A G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 ELF3 1999 hgsc.bcm.edu 36 1 200249641 200249642 + Frame_Shift_Ins INS - - G novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 OR2T4 127074 hgsc.bcm.edu 36 1 246591588 246591589 + Frame_Shift_Del DEL CA CA - novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 CA CA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 SPATA3 130560 hgsc.bcm.edu 36 2 231569277 231569303 + In_Frame_Del DEL CAGCAGCCTAGCCCTGAATCCACACCA CAGCAGCCTAGCCCTGAATCCACACCA - novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 CAGCAGCCTAGCCCTGAATCCACACCA CAGCAGCCTAGCCCTGAATCCACACCA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 MLL3 58508 hgsc.bcm.edu 36 7 151505081 151505081 + Frame_Shift_Del DEL T T - novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 RIC8A 60626 hgsc.bcm.edu 36 11 199895 199897 + In_Frame_Del DEL CCC CCC - novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 CCC CCC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 KRTAP5-1 387264 hgsc.bcm.edu 36 11 1562697 1562726 + In_Frame_Del DEL CCACAGCCACCCTTGGATCCCCCACAAGAG CCACAGCCACCCTTGGATCCCCCACAAGAG - novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 CCACAGCCACCCTTGGATCCCCCACAAGAG CCACAGCCACCCTTGGATCCCCCACAAGAG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 TMBIM4 51643 hgsc.bcm.edu 36 12 64818204 64818204 + Frame_Shift_Del DEL A A - novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 ATP8B1 5205 hgsc.bcm.edu 36 18 53468591 53468600 + In_Frame_Del DEL TTATACCTTA TTATACCTTA - novel unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 TTATACCTTA TTATACCTTA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5 RBM38 55544 hgsc.bcm.edu 36 20 55400099 55400100 + Frame_Shift_Ins INS - - C rs11481309 unknown TCGA-AH-6643-01A-11D-1826-10 TCGA-AH-6643-11A-01D-1826-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 0dda2877-007f-4ced-b4a8-d1cf5ecbb4f3 2627ba9d-31da-4d64-a36f-1e2afa0645b5