Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID CRHR2 1395 hgsc.bcm.edu 36 7 30659727 30659727 + Silent SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 EGFR 1956 hgsc.bcm.edu 36 7 55209168 55209168 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ZNF479 90827 hgsc.bcm.edu 36 7 57192346 57192346 + Missense_Mutation SNP G G T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 WBSCR17 64409 hgsc.bcm.edu 36 7 70518904 70518904 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ZP3 7784 hgsc.bcm.edu 36 7 75900841 75900841 + Silent SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ZNF804B 219578 hgsc.bcm.edu 36 7 88801683 88801683 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 COL1A2 1278 hgsc.bcm.edu 36 7 93886798 93886798 + Missense_Mutation SNP G G A rs34147460 unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 NPTX2 4885 hgsc.bcm.edu 36 7 98095733 98095733 + Silent SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 MUC17 140453 hgsc.bcm.edu 36 7 100463998 100463998 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 FOXP2 93986 hgsc.bcm.edu 36 7 114055946 114055946 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 CALD1 800 hgsc.bcm.edu 36 7 134264124 134264124 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ZNF467 168544 hgsc.bcm.edu 36 7 149093680 149093680 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 TRIB3 57761 hgsc.bcm.edu 36 20 316896 316896 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 TMC2 117532 hgsc.bcm.edu 36 20 2541939 2541939 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 CSRP2BP 57325 hgsc.bcm.edu 36 20 18091316 18091316 + Silent SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 XKR7 343702 hgsc.bcm.edu 36 20 30048042 30048042 + Silent SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 SAMHD1 25939 hgsc.bcm.edu 36 20 35008604 35008604 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 KIAA1755 85449 hgsc.bcm.edu 36 20 36302506 36302506 + Missense_Mutation SNP G G T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 NCOA3 8202 hgsc.bcm.edu 36 20 45713246 45713246 + Silent SNP G G A rs2664555 unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ZNF70 7621 hgsc.bcm.edu 36 22 22416478 22416478 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 SEZ6L 23544 hgsc.bcm.edu 36 22 25073766 25073766 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 DEPDC5 9681 hgsc.bcm.edu 36 22 30492610 30492610 + Nonsense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 PKDREJ 10343 hgsc.bcm.edu 36 22 45032793 45032793 + Silent SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 TUBGCP6 85378 hgsc.bcm.edu 36 22 49005074 49005074 + Silent SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 NOVA1 4857 hgsc.bcm.edu 36 14 26134495 26134495 + Missense_Mutation SNP C C A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 MIA2 117153 hgsc.bcm.edu 36 14 38792088 38792088 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 SIPA1L1 26037 hgsc.bcm.edu 36 14 71125434 71125434 + Silent SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 GSTZ1 2954 hgsc.bcm.edu 36 14 76867244 76867244 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 GNA15 2769 hgsc.bcm.edu 36 19 3101215 3101215 + Nonsense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 FBN3 84467 hgsc.bcm.edu 36 19 8115823 8115823 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 MUC16 94025 hgsc.bcm.edu 36 19 8920278 8920278 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 JAK3 3718 hgsc.bcm.edu 36 19 17806506 17806506 + Nonsense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ZNF529 57711 hgsc.bcm.edu 36 19 41730212 41730212 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ARHGEF1 9138 hgsc.bcm.edu 36 19 47090154 47090154 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 PSG11 5680 hgsc.bcm.edu 36 19 48220844 48220844 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 NUCB1 4924 hgsc.bcm.edu 36 19 54100938 54100938 + Silent SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 LILRB3 79168 hgsc.bcm.edu 36 19 59416353 59416353 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 LILRA2 11027 hgsc.bcm.edu 36 19 59778193 59778193 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 KIR2DL1 3802 hgsc.bcm.edu 36 19 59976792 59976792 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 PTPRH 5794 hgsc.bcm.edu 36 19 60384970 60384970 + Silent SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 DOCK5 80005 hgsc.bcm.edu 36 8 25302664 25302664 + Missense_Mutation SNP G G T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ADAM18 8749 hgsc.bcm.edu 36 8 39587387 39587387 + Missense_Mutation SNP C C A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 IDO1 3620 hgsc.bcm.edu 36 8 39899297 39899297 + Silent SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 CYP7B1 9420 hgsc.bcm.edu 36 8 65671843 65671843 + Silent SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 RPL7 6129 hgsc.bcm.edu 36 8 74367190 74367190 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 SYBU 55638 hgsc.bcm.edu 36 8 110656967 110656967 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 SYBU 55638 hgsc.bcm.edu 36 8 110656968 110656968 + Silent SNP T T A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 SYBU 55638 hgsc.bcm.edu 36 8 110656969 110656969 + Missense_Mutation SNP A A T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 EPPK1 83481 hgsc.bcm.edu 36 8 145015701 145015701 + Missense_Mutation SNP C C G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 KLHDC7A 127707 hgsc.bcm.edu 36 1 18680137 18680137 + Silent SNP C C A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 HPCA 3208 hgsc.bcm.edu 36 1 33127265 33127265 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 HIVEP3 59269 hgsc.bcm.edu 36 1 41818175 41818175 + Silent SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 WDR78 79819 hgsc.bcm.edu 36 1 67131678 67131678 + Missense_Mutation SNP C C A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 KCNA10 3744 hgsc.bcm.edu 36 1 110862129 110862129 + Silent SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 OVGP1 5016 hgsc.bcm.edu 36 1 111758661 111758661 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ST7L 54879 hgsc.bcm.edu 36 1 112963240 112963240 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 BCL2L15 440603 hgsc.bcm.edu 36 1 114230737 114230737 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ITGA10 8515 hgsc.bcm.edu 36 1 144247371 144247371 + Silent SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 SPRR2E 6704 hgsc.bcm.edu 36 1 151332733 151332733 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 CREB3L4 148327 hgsc.bcm.edu 36 1 152207695 152207695 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 IQGAP3 128239 hgsc.bcm.edu 36 1 154770281 154770281 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 OR6Y1 391112 hgsc.bcm.edu 36 1 156784157 156784157 + Silent SNP A A T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 SPTA1 6708 hgsc.bcm.edu 36 1 156876416 156876416 + Silent SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 SLAMF1 6504 hgsc.bcm.edu 36 1 158873778 158873778 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ARHGAP30 257106 hgsc.bcm.edu 36 1 159285104 159285104 + Silent SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 FAM5C 339479 hgsc.bcm.edu 36 1 188333806 188333806 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 PRSS38 0 hgsc.bcm.edu 36 1 226071695 226071695 + Silent SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 WDR64 128025 hgsc.bcm.edu 36 1 240026223 240026223 + Silent SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 OR2T34 127068 hgsc.bcm.edu 36 1 246804503 246804503 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ZNF672 79894 hgsc.bcm.edu 36 1 247108269 247108269 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 IFITM3 10410 hgsc.bcm.edu 36 11 310649 310649 + Silent SNP G G A rs11553885 unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 MUC6 4588 hgsc.bcm.edu 36 11 1014980 1014980 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 OR52E2 119678 hgsc.bcm.edu 36 11 5037171 5037171 + Nonsense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 TRIM34 445372 hgsc.bcm.edu 36 11 5610317 5610317 + Silent SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 CCKBR 887 hgsc.bcm.edu 36 11 6248985 6248985 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 STK33 65975 hgsc.bcm.edu 36 11 8370709 8370709 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 KCNC1 3746 hgsc.bcm.edu 36 11 17714374 17714374 + Silent SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 MRGPRX3 117195 hgsc.bcm.edu 36 11 18115895 18115895 + Silent SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 LUZP2 338645 hgsc.bcm.edu 36 11 24707377 24707377 + Missense_Mutation SNP G G T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 OR4X1 390113 hgsc.bcm.edu 36 11 48242167 48242167 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 OR8H1 219469 hgsc.bcm.edu 36 11 55814448 55814448 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 OR5M10 390167 hgsc.bcm.edu 36 11 56100842 56100842 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 OR5M10 390167 hgsc.bcm.edu 36 11 56100843 56100843 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 PLAC1L 219990 hgsc.bcm.edu 36 11 59567673 59567673 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 FADS2 9415 hgsc.bcm.edu 36 11 61389244 61389244 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 SLC22A25 387601 hgsc.bcm.edu 36 11 62753478 62753478 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 FAM86C 55199 hgsc.bcm.edu 36 11 71184787 71184787 + Missense_Mutation SNP G G C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 CAPN5 726 hgsc.bcm.edu 36 11 76507787 76507787 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 DLG2 4355 hgsc.bcm.edu 36 11 83448129 83448129 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 SYTL2 54843 hgsc.bcm.edu 36 11 85122744 85122744 + Missense_Mutation SNP C C G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 GPR83 10888 hgsc.bcm.edu 36 11 93753481 93753481 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ATM 472 hgsc.bcm.edu 36 11 107647253 107647253 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ATM 472 hgsc.bcm.edu 36 11 107707964 107707964 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 HTR3A 3359 hgsc.bcm.edu 36 11 113365591 113365591 + Missense_Mutation SNP G G A rs34111946 unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 CBL 867 hgsc.bcm.edu 36 11 118654457 118654457 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 PANX3 116337 hgsc.bcm.edu 36 11 123994620 123994620 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 FOXF2 2295 hgsc.bcm.edu 36 6 1335680 1335680 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 SKIV2L 6499 hgsc.bcm.edu 36 6 32041732 32041732 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 KHDC1 80759 hgsc.bcm.edu 36 6 74008073 74008073 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 PHIP 55023 hgsc.bcm.edu 36 6 79749506 79749506 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 BCLAF1 9774 hgsc.bcm.edu 36 6 136640815 136640815 + Silent SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 TNFAIP3 7128 hgsc.bcm.edu 36 6 138239913 138239913 + Silent SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 HIVEP2 3097 hgsc.bcm.edu 36 6 143132424 143132424 + Silent SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ULBP2 80328 hgsc.bcm.edu 36 6 150309301 150309301 + Silent SNP C C G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 SYNE1 23345 hgsc.bcm.edu 36 6 152527077 152527077 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 SYNE1 23345 hgsc.bcm.edu 36 6 152671411 152671411 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 METT10D 79066 hgsc.bcm.edu 36 17 2270588 2270588 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 GP1BA 2811 hgsc.bcm.edu 36 17 4777936 4777936 + Silent SNP C C A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 C17orf74 201243 hgsc.bcm.edu 36 17 7270482 7270482 + Nonsense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 TP53 7157 hgsc.bcm.edu 36 17 7517845 7517845 + Missense_Mutation SNP C C T rs28934576 unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 NF1 4763 hgsc.bcm.edu 36 17 26688534 26688534 + Silent SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 TRIM25 7706 hgsc.bcm.edu 36 17 52324504 52324504 + Missense_Mutation SNP C C A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 KIF19 124602 hgsc.bcm.edu 36 17 69852609 69852609 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ITSN1 6453 hgsc.bcm.edu 36 21 34159470 34159470 + Missense_Mutation SNP A A C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 MEFV 4210 hgsc.bcm.edu 36 16 3233890 3233890 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 CPPED1 55313 hgsc.bcm.edu 36 16 12666412 12666412 + Silent SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ACSM5 54988 hgsc.bcm.edu 36 16 20340212 20340212 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ZKSCAN2 342357 hgsc.bcm.edu 36 16 25158834 25158834 + Missense_Mutation SNP C C A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ITGAD 3681 hgsc.bcm.edu 36 16 31342200 31342200 + Silent SNP G G C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 SNX20 124460 hgsc.bcm.edu 36 16 49265392 49265392 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 RBL2 5934 hgsc.bcm.edu 36 16 52046175 52046175 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 CDH11 1009 hgsc.bcm.edu 36 16 63542325 63542325 + Silent SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 FANCA 2175 hgsc.bcm.edu 36 16 88376984 88376984 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 KIAA0802 23255 hgsc.bcm.edu 36 18 8814820 8814820 + Silent SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 KCTD1 284252 hgsc.bcm.edu 36 18 22289773 22289773 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 SLC14A2 8170 hgsc.bcm.edu 36 18 41507773 41507773 + Silent SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 STARD6 147323 hgsc.bcm.edu 36 18 50105217 50105217 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 IL17RC 84818 hgsc.bcm.edu 36 3 9945121 9945121 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 CTNNB1 1499 hgsc.bcm.edu 36 3 41241163 41241163 + Silent SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 GPR15 2838 hgsc.bcm.edu 36 3 99733910 99733910 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 PLXNA1 5361 hgsc.bcm.edu 36 3 128233947 128233947 + Silent SNP G G T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 CLSTN2 64084 hgsc.bcm.edu 36 3 141760376 141760376 + Silent SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 PIK3CA 5290 hgsc.bcm.edu 36 3 180399419 180399419 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 PIK3CA 5290 hgsc.bcm.edu 36 3 180404144 180404144 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 PIK3CA 5290 hgsc.bcm.edu 36 3 180418789 180418789 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 PZP 5858 hgsc.bcm.edu 36 12 9246198 9246198 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 KLRF1 51348 hgsc.bcm.edu 36 12 9877197 9877197 + Silent SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 LRP6 4040 hgsc.bcm.edu 36 12 12203180 12203180 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 KRAS 3845 hgsc.bcm.edu 36 12 25271542 25271542 + Missense_Mutation SNP T T G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ARID2 196528 hgsc.bcm.edu 36 12 44530531 44530531 + Silent SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 LASS5 91012 hgsc.bcm.edu 36 12 48823178 48823178 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 SCN8A 6334 hgsc.bcm.edu 36 12 50449003 50449003 + Missense_Mutation SNP C C A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 KRT4 3851 hgsc.bcm.edu 36 12 51493849 51493849 + Silent SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 OR6C1 390321 hgsc.bcm.edu 36 12 54001086 54001086 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 LRIG3 121227 hgsc.bcm.edu 36 12 57557707 57557707 + Missense_Mutation SNP T T A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 C12orf64 283310 hgsc.bcm.edu 36 12 79188062 79188062 + Missense_Mutation SNP G G C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 LRRIQ1 84125 hgsc.bcm.edu 36 12 83974583 83974583 + Silent SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 UNG 7374 hgsc.bcm.edu 36 12 108020787 108020787 + Silent SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 OAS3 4940 hgsc.bcm.edu 36 12 111888058 111888058 + Nonsense_Mutation SNP C C T rs61942233 unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 C12orf43 64897 hgsc.bcm.edu 36 12 119938567 119938567 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ABCB9 23457 hgsc.bcm.edu 36 12 121996553 121996553 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ULK1 8408 hgsc.bcm.edu 36 12 130966586 130966586 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 SIN3A 25942 hgsc.bcm.edu 36 15 73489282 73489282 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 CDKL5 6792 hgsc.bcm.edu 36 X 18516168 18516168 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 DGKK 139189 hgsc.bcm.edu 36 X 50131538 50131538 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ITIH5L 347365 hgsc.bcm.edu 36 X 54794230 54794230 + Missense_Mutation SNP G G T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ALAS2 212 hgsc.bcm.edu 36 X 55058780 55058780 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 STARD8 9754 hgsc.bcm.edu 36 X 67860278 67860278 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 P2RY10 27334 hgsc.bcm.edu 36 X 78102727 78102727 + Silent SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 BRWD3 254065 hgsc.bcm.edu 36 X 79832149 79832149 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ZNF711 7552 hgsc.bcm.edu 36 X 84412934 84412934 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 KLHL4 56062 hgsc.bcm.edu 36 X 86775524 86775524 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 PCDH19 57575 hgsc.bcm.edu 36 X 99438333 99438333 + Silent SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 NRK 203447 hgsc.bcm.edu 36 X 105046382 105046382 + Missense_Mutation SNP A A T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 VSIG1 340547 hgsc.bcm.edu 36 X 107206095 107206095 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 KIAA1210 57481 hgsc.bcm.edu 36 X 118104779 118104779 + Missense_Mutation SNP T T G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 IGSF1 3547 hgsc.bcm.edu 36 X 130237299 130237299 + Silent SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ZFP92 139735 hgsc.bcm.edu 36 X 152339328 152339328 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ZFP92 139735 hgsc.bcm.edu 36 X 152339998 152339998 + Silent SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 FLNA 2316 hgsc.bcm.edu 36 X 153246114 153246114 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 CTAG2 30848 hgsc.bcm.edu 36 X 153534786 153534786 + Silent SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ZNF718 255403 hgsc.bcm.edu 36 4 50044 50044 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 PIGG 54872 hgsc.bcm.edu 36 4 523022 523022 + Missense_Mutation SNP C C A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 PI4K2B 55300 hgsc.bcm.edu 36 4 24871246 24871246 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 N4BP2 55728 hgsc.bcm.edu 36 4 39780518 39780518 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 KIT 3815 hgsc.bcm.edu 36 4 55286849 55286849 + Silent SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 TACR3 6870 hgsc.bcm.edu 36 4 104859752 104859752 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 FAT4 79633 hgsc.bcm.edu 36 4 126630882 126630882 + Silent SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 PRMT10 90826 hgsc.bcm.edu 36 4 148814345 148814345 + Missense_Mutation SNP G G T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 FBXW7 55294 hgsc.bcm.edu 36 4 153464896 153464896 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 DDX1 1653 hgsc.bcm.edu 36 2 15677834 15677834 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 APOB 338 hgsc.bcm.edu 36 2 21085707 21085707 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 CAD 1677 hgsc.bcm.edu 36 2 27313136 27313136 + Missense_Mutation SNP G G T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 C2orf3 6936 hgsc.bcm.edu 36 2 75787228 75787228 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 AMMECR1L 83607 hgsc.bcm.edu 36 2 128343532 128343532 + Silent SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ACMSD 130013 hgsc.bcm.edu 36 2 135346642 135346642 + Missense_Mutation SNP T T A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 PDE11A 50940 hgsc.bcm.edu 36 2 178202429 178202429 + Silent SNP G G T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 TTN 7273 hgsc.bcm.edu 36 2 179268977 179268977 + Missense_Mutation SNP A A T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ANO7 50636 hgsc.bcm.edu 36 2 241797655 241797655 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 KCNV2 169522 hgsc.bcm.edu 36 9 2708826 2708826 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 FREM1 158326 hgsc.bcm.edu 36 9 14858843 14858843 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 HAUS6 54801 hgsc.bcm.edu 36 9 19053006 19053006 + Silent SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 DNAJB5 25822 hgsc.bcm.edu 36 9 34986273 34986273 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 MELK 9833 hgsc.bcm.edu 36 9 36661030 36661030 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 PTCH1 5727 hgsc.bcm.edu 36 9 97271000 97271000 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 GPR21 2844 hgsc.bcm.edu 36 9 124837235 124837235 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 HSPA5 3309 hgsc.bcm.edu 36 9 127040896 127040896 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 KIAA1984 84960 hgsc.bcm.edu 36 9 138814682 138814682 + Missense_Mutation SNP C C G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 GPR12 2835 hgsc.bcm.edu 36 13 26231439 26231439 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 RB1 5925 hgsc.bcm.edu 36 13 47931927 47931927 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 SLITRK6 84189 hgsc.bcm.edu 36 13 85266487 85266487 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ERCC5 2073 hgsc.bcm.edu 36 13 102308654 102308654 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 KIAA1462 57608 hgsc.bcm.edu 36 10 30355084 30355084 + Silent SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ARHGAP22 58504 hgsc.bcm.edu 36 10 49328687 49328687 + Silent SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 P4HA1 5033 hgsc.bcm.edu 36 10 74474768 74474768 + Silent SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 PDCD11 22984 hgsc.bcm.edu 36 10 105194320 105194320 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 WDR11 55717 hgsc.bcm.edu 36 10 122623423 122623423 + Silent SNP C C A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 DNAH5 1767 hgsc.bcm.edu 36 5 13770498 13770498 + Nonsense_Mutation SNP C C A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 DNAH5 1767 hgsc.bcm.edu 36 5 13947787 13947787 + Silent SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 CDH18 1016 hgsc.bcm.edu 36 5 19874660 19874660 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ENC1 8507 hgsc.bcm.edu 36 5 73967057 73967057 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 PPIP5K2 23262 hgsc.bcm.edu 36 5 102502034 102502034 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 APC 324 hgsc.bcm.edu 36 5 112190790 112190790 + Nonsense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 APC 324 hgsc.bcm.edu 36 5 112201502 112201502 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 APC 324 hgsc.bcm.edu 36 5 112202642 112202642 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 APC 324 hgsc.bcm.edu 36 5 112203097 112203097 + Nonsense_Mutation SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 APC 324 hgsc.bcm.edu 36 5 112203577 112203577 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ADAMTS19 171019 hgsc.bcm.edu 36 5 129098564 129098564 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 PCDHA6 56142 hgsc.bcm.edu 36 5 140189936 140189936 + Silent SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 PCDHGA6 56109 hgsc.bcm.edu 36 5 140735638 140735638 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 GRPEL2 134266 hgsc.bcm.edu 36 5 148710760 148710760 + Nonsense_Mutation SNP G G T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 HMGXB3 22993 hgsc.bcm.edu 36 5 149401611 149401611 + Silent SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 GRM6 2916 hgsc.bcm.edu 36 5 178346562 178346562 + Silent SNP G G A novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 CRYBB3 1417 hgsc.bcm.edu 36 22 23927342 23927342 + Splice_Site SNP A A G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 SNTG1 54212 hgsc.bcm.edu 36 8 51469326 51469326 + Splice_Site SNP C C T novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 MEGF6 1953 hgsc.bcm.edu 36 1 3403121 3403122 + Frame_Shift_Ins INS - - G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 FMN2 56776 hgsc.bcm.edu 36 1 238322192 238322194 + In_Frame_Del DEL GGC GGC - novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 GGC GGC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ZFP36L2 678 hgsc.bcm.edu 36 2 43305943 43305944 + Frame_Shift_Ins INS - - C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 KCNH8 131096 hgsc.bcm.edu 36 3 19270240 19270240 + Frame_Shift_Del DEL C C - novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 UBA7 7318 hgsc.bcm.edu 36 3 49820302 49820303 + Frame_Shift_Ins INS - - C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 MUC4 4585 hgsc.bcm.edu 36 3 196990687 196990734 + In_Frame_Del DEL GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC - novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 PCDHA11 56138 hgsc.bcm.edu 36 5 140230962 140230962 + Frame_Shift_Del DEL T T - novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 HLA-DQA1 3117 hgsc.bcm.edu 36 6 32717217 32717219 + In_Frame_Del DEL GGT GGT - novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 GGT GGT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ZNF862 643641 hgsc.bcm.edu 36 7 149190163 149190164 + Frame_Shift_Ins INS - - G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 GPRIN2 9721 hgsc.bcm.edu 36 10 46419597 46419598 + In_Frame_Ins INS - - ATGAGGGAG novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 MUC2 4583 hgsc.bcm.edu 36 11 1082802 1082802 + Frame_Shift_Del DEL A A - novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 B3GNT6 192134 hgsc.bcm.edu 36 11 76429190 76429190 + Frame_Shift_Del DEL T T - novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 ZFYVE19 84936 hgsc.bcm.edu 36 15 38887191 38887192 + Frame_Shift_Ins INS - - GGGGC novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 OTOA 146183 hgsc.bcm.edu 36 16 21641742 21641742 + Frame_Shift_Del DEL T T - novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 TMEM97 27346 hgsc.bcm.edu 36 17 23677934 23677934 + Frame_Shift_Del DEL A A - novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 PLEKHM1 9842 hgsc.bcm.edu 36 17 40908798 40908799 + Frame_Shift_Ins INS - - C novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 HOXB1 3211 hgsc.bcm.edu 36 17 43963183 43963184 + In_Frame_Ins INS - - GGGCGCTGT novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 TUBB4 10382 hgsc.bcm.edu 36 19 6446678 6446679 + Frame_Shift_Ins INS - - G novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 LTN1 0 hgsc.bcm.edu 36 21 29261077 29261077 + Frame_Shift_Del DEL T T - novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 CDC42EP1 11135 hgsc.bcm.edu 36 22 36294355 36294375 + In_Frame_Del DEL CAGCGCCTGCTGCAAACCCCT CAGCGCCTGCTGCAAACCCCT - novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 CAGCGCCTGCTGCAAACCCCT CAGCGCCTGCTGCAAACCCCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 BAIAP2L2 80115 hgsc.bcm.edu 36 22 36812299 36812340 + In_Frame_Del DEL TGCGGGAGCGGGACTGGCCATCCCAGTACTCCGAGGGTGCTA TGCGGGAGCGGGACTGGCCATCCCAGTACTCCGAGGGTGCTA - novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 TGCGGGAGCGGGACTGGCCATCCCAGTACTCCGAGGGTGCTA TGCGGGAGCGGGACTGGCCATCCCAGTACTCCGAGGGTGCTA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3 MAOA 4128 hgsc.bcm.edu 36 X 43486170 43486171 + In_Frame_Ins INS - - GAG novel unknown TCGA-AG-3742-01A-11D-1657-10 TCGA-AG-3742-11A-01D-1657-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 48f3fa65-c79b-4f86-8d30-a692d0d5521b 17d4fb78-6e64-4aaf-b136-e270b18076b3