Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_alt_allele	validation_method	validation_status	validation_tumor_sample	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
OR8K5	219453	broad.mit.edu	37	11	55926912	55926912	+	Silent	SNP	G	G	A	rs147115733		TCGA-RW-A68C-01A-11D-A35D-08	TCGA-RW-A68C-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	8e70c54a-1063-4eaf-97f3-7fa8f05711e9	1afed359-ab74-4787-bffb-7f0635eba182	g.chr11:55926912G>A	ENST00000313447.1	-	1	881	c.882C>T	c.(880-882)aaC>aaT	p.N294N		NM_001004058.2	NP_001004058.2	Q8NH50	OR8K5_HUMAN	olfactory receptor, family 8, subfamily K, member 5	294					sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			large_intestine(3)|lung(24)|ovary(2)|pancreas(2)|skin(1)|stomach(1)|upper_aerodigestive_tract(1)	34	Esophageal squamous(21;0.00693)	Lung NSC(402;0.197)|all_epithelial(135;0.236)				TCACCTCTTCGTTTCTTAAGC	0.299000													3	36					0	0	1	0	0
BHLHE40	8553	broad.mit.edu	37	3	5024941	5024941	+	Missense_Mutation	SNP	G	G	A			TCGA-RW-A68C-01A-11D-A35D-08	TCGA-RW-A68C-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	8e70c54a-1063-4eaf-97f3-7fa8f05711e9	1afed359-ab74-4787-bffb-7f0635eba182	g.chr3:5024941G>A	ENST00000256495.3	+	5	1406	c.803G>A	c.(802-804)aGg>aAg	p.R268K		NM_003670.2	NP_003661.1	O14503	BHE40_HUMAN	basic helix-loop-helix family, member e40	268						Golgi apparatus|nucleolus	DNA binding|protein binding|sequence-specific DNA binding transcription factor activity			breast(1)|central_nervous_system(1)|cervix(2)|endometrium(2)|large_intestine(1)|lung(2)|ovary(1)|skin(2)	12						CACGGACGCAGGTTCACGATG	0.552000													4	45					0	0	1	0	0
RP11-468E2.4	0	broad.mit.edu	37	14	24629074	24629074	+	Splice_Site	SNP	C	C	T			TCGA-RW-A68C-01A-11D-A35D-08	TCGA-RW-A68C-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	8e70c54a-1063-4eaf-97f3-7fa8f05711e9	1afed359-ab74-4787-bffb-7f0635eba182	g.chr14:24629074C>T	ENST00000558468.1	+	11	1326	c.1324_splice	c.e11-1	p.G442_splice	RNF31_ENST00000559275.1_Splice_Site_p.G816_splice|RNF31_ENST00000324103.6_Splice_Site_p.G967_splice|RNF31_ENST00000382687.3_Splice_Site_p.G816_splice														p.G967G(1)									CACCTTTAGGCGGCTGCCGAG	0.582000													4	141					0	0	1	0	0
KIAA0754	643314	broad.mit.edu	37	1	39878320	39878320	+	Missense_Mutation	SNP	G	G	A			TCGA-RW-A68C-01A-11D-A35D-08	TCGA-RW-A68C-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	8e70c54a-1063-4eaf-97f3-7fa8f05711e9	1afed359-ab74-4787-bffb-7f0635eba182	g.chr1:39878320G>A	ENST00000530275.1	+	1	2170	c.1975G>A	c.(1975-1977)Ggg>Agg	p.G659R	MACF1_ENST00000289893.4_Intron|MACF1_ENST00000317713.7_Intron|MACF1_ENST00000564288.1_Intron|MACF1_ENST00000545844.1_Intron|MACF1_ENST00000361689.2_Intron|MACF1_ENST00000539005.1_Intron|MACF1_ENST00000567887.1_Intron|MACF1_ENST00000372915.3_Intron	NM_015038.1	NP_055853.1	O94854	K0754_HUMAN	KIAA0754	659										central_nervous_system(1)|large_intestine(6)|skin(1)	8	Lung NSC(20;5.57e-06)|Ovarian(52;0.00769)|Acute lymphoblastic leukemia(166;0.074)	Myeloproliferative disorder(586;0.0393)	OV - Ovarian serous cystadenocarcinoma(33;7.78e-19)|Epithelial(16;1.73e-17)|all cancers(16;2.49e-16)|LUSC - Lung squamous cell carcinoma(16;0.00146)|Lung(16;0.00204)			ATCAGAGGGAGGGGAGATGGA	0.428000													5	46					0	0	1	0	0
LARP1	23367	broad.mit.edu	37	5	154183828	154183828	+	Missense_Mutation	SNP	T	T	A			TCGA-RW-A68C-01A-11D-A35D-08	TCGA-RW-A68C-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	8e70c54a-1063-4eaf-97f3-7fa8f05711e9	1afed359-ab74-4787-bffb-7f0635eba182	g.chr5:154183828T>A	ENST00000336314.4	+	14	2300	c.2276T>A	c.(2275-2277)aTg>aAg	p.M759K		NM_015315.3	NP_056130.2	Q6PKG0	LARP1_HUMAN	La ribonucleoprotein domain family, member 1	836							protein binding|RNA binding			breast(1)|endometrium(3)|kidney(2)|large_intestine(10)|lung(9)|ovary(3)|pancreas(1)|prostate(2)|skin(1)|upper_aerodigestive_tract(1)	33	Renal(175;0.00488)	Medulloblastoma(196;0.0354)|all_neural(177;0.147)	KIRC - Kidney renal clear cell carcinoma(527;0.00112)			GGCTGGGTGATGGATTCCCGT	0.557000													10	77					0	0	1	0	0
PTPRD	5789	broad.mit.edu	37	9	8389380	8389380	+	Missense_Mutation	SNP	G	G	T			TCGA-RW-A68C-01A-11D-A35D-08	TCGA-RW-A68C-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	8e70c54a-1063-4eaf-97f3-7fa8f05711e9	1afed359-ab74-4787-bffb-7f0635eba182	g.chr9:8389380G>T	ENST00000381196.4	-	34	4781	c.4238C>A	c.(4237-4239)gCc>gAc	p.A1413D	PTPRD_ENST00000355233.5_Missense_Mutation_p.A1007D|PTPRD_ENST00000356435.5_Missense_Mutation_p.A1413D|PTPRD_ENST00000397611.3_Missense_Mutation_p.A1003D|PTPRD_ENST00000397617.3_Missense_Mutation_p.A1006D|PTPRD_ENST00000360074.4_Missense_Mutation_p.A1400D|PTPRD_ENST00000358503.5_Missense_Mutation_p.A1391D|PTPRD_ENST00000540109.1_Missense_Mutation_p.A1413D|PTPRD_ENST00000486161.1_Missense_Mutation_p.A1006D|PTPRD_ENST00000397606.3_Missense_Mutation_p.A1006D|PTPRD_ENST00000537002.1_Missense_Mutation_p.A1003D	NM_002839.3	NP_002830.1	P23468	PTPRD_HUMAN	protein tyrosine phosphatase, receptor type, D	1413	Tyrosine-protein phosphatase 1.				transmembrane receptor protein tyrosine phosphatase signaling pathway	integral to plasma membrane	protein binding|transmembrane receptor protein tyrosine phosphatase activity			NS(1)|breast(7)|central_nervous_system(1)|endometrium(11)|haematopoietic_and_lymphoid_tissue(1)|kidney(1)|large_intestine(22)|liver(1)|lung(83)|ovary(4)|pancreas(1)|prostate(7)|skin(19)|stomach(3)|upper_aerodigestive_tract(5)|urinary_tract(1)	168		all_cancers(3;3.38e-95)|all_epithelial(3;2.84e-91)|all_lung(3;7.3e-56)|Lung NSC(3;1.82e-52)|Renal(3;3.42e-19)|all_hematologic(3;0.000134)|all_neural(3;0.00409)|Acute lymphoblastic leukemia(23;0.0069)|Melanoma(3;0.0121)|Myeloproliferative disorder(4;0.0122)|Medulloblastoma(3;0.0144)|Lung SC(3;0.0301)|Ovarian(56;0.0694)|Hepatocellular(3;0.0824)		all cancers(1;3.38e-12)|Epithelial(1;2.12e-09)|STAD - Stomach adenocarcinoma(1;1.29e-07)|KIRC - Kidney renal clear cell carcinoma(3;5.49e-07)|Kidney(3;6.36e-07)|GBM - Glioblastoma multiforme(50;9.05e-05)|Lung(1;0.000189)|BRCA - Breast invasive adenocarcinoma(1;0.00178)|LUSC - Lung squamous cell carcinoma(1;0.0115)|LUAD - Lung adenocarcinoma(58;0.119)		TATGTAGTTGGCATTCACATA	0.448000										TSP Lung(15;0.13)			7	89					8.12818e-05	8.53459e-05	1	1	0
TPTE2P6	374491	broad.mit.edu	37	13	25168432	25168432	+	RNA	SNP	T	T	C	rs149337771	by1000genomes	TCGA-RW-A68C-01A-11D-A35D-08	TCGA-RW-A68C-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	8e70c54a-1063-4eaf-97f3-7fa8f05711e9	1afed359-ab74-4787-bffb-7f0635eba182	g.chr13:25168432T>C	ENST00000453498.1	+	0	1104																											TTGAAACAGCTGGTGTATTAA	0.373000													3	28					0	0	1	0	0
PCYOX1	51449	broad.mit.edu	37	2	70485303	70485303	+	Missense_Mutation	SNP	C	C	T			TCGA-RW-A68C-01A-11D-A35D-08	TCGA-RW-A68C-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	8e70c54a-1063-4eaf-97f3-7fa8f05711e9	1afed359-ab74-4787-bffb-7f0635eba182	g.chr2:70485303C>T	ENST00000433351.2	+	1	35	c.7C>T	c.(7-9)Cgc>Tgc	p.R3C	PCYOX1_ENST00000264441.5_Missense_Mutation_p.R3C|PCYOX1_ENST00000505044.2_Intron	NM_016297.3	NP_057381.3	Q9UHG3	PCYOX_HUMAN	prenylcysteine oxidase 1	3					prenylated protein catabolic process	lysosome|very-low-density lipoprotein particle	prenylcysteine oxidase activity			breast(1)|central_nervous_system(3)|endometrium(1)|kidney(1)|large_intestine(3)|lung(6)	15						GGCCATGGGGCGCGTCGTCGC	0.731000													5	10					0	0	1	0	0
ADAM20	8748	broad.mit.edu	37	14	70989875	70989875	+	Missense_Mutation	SNP	T	T	C			TCGA-RW-A68C-01A-11D-A35D-08	TCGA-RW-A68C-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	8e70c54a-1063-4eaf-97f3-7fa8f05711e9	1afed359-ab74-4787-bffb-7f0635eba182	g.chr14:70989875T>C	ENST00000256389.3	-	2	1994	c.1750A>G	c.(1750-1752)Atc>Gtc	p.I584V	RP11-486O13.4_ENST00000556646.1_lincRNA	NM_003814.4	NP_003805.3	O43506	ADA20_HUMAN	ADAM metallopeptidase domain 20	534	Cys-rich.				proteolysis|single fertilization	integral to membrane	metalloendopeptidase activity|zinc ion binding			autonomic_ganglia(1)|breast(2)|endometrium(2)|kidney(1)|large_intestine(3)|lung(15)|prostate(1)|skin(2)	27			KIRC - Kidney renal clear cell carcinoma(12;0.133)|Kidney(31;0.188)	all cancers(60;0.00294)|BRCA - Breast invasive adenocarcinoma(234;0.00668)|OV - Ovarian serous cystadenocarcinoma(108;0.0344)		TGGGTGTTGATTTCTTGGTAG	0.423000													8	87					0	0	1	0	0
NDUFA10	4705	broad.mit.edu	37	2	240923039	240923039	+	Silent	SNP	G	G	A			TCGA-RW-A68C-01A-11D-A35D-08	TCGA-RW-A68C-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	8e70c54a-1063-4eaf-97f3-7fa8f05711e9	1afed359-ab74-4787-bffb-7f0635eba182	g.chr2:240923039G>A	ENST00000307300.4	-	11	1207	c.1185C>T	c.(1183-1185)acC>acT	p.T395T	NDUFA10_ENST00000404554.1_Intron|NDUFA10_ENST00000252711.2_Intron			O95299	NDUAA_HUMAN	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa	0					mitochondrial electron transport, NADH to ubiquinone|nucleobase, nucleoside, nucleotide and nucleic acid metabolic process|transport	mitochondrial matrix|mitochondrial respiratory chain complex I	ATP binding|NADH dehydrogenase (ubiquinone) activity|phosphotransferase activity, alcohol group as acceptor			central_nervous_system(1)|endometrium(1)|haematopoietic_and_lymphoid_tissue(1)|kidney(1)|large_intestine(4)|lung(8)	16		all_epithelial(40;4.26e-15)|Breast(86;4.4e-05)|Renal(207;0.00183)|Ovarian(221;0.0228)|all_lung(227;0.0396)|Lung NSC(271;0.128)|all_hematologic(139;0.158)|Melanoma(123;0.16)|Hepatocellular(293;0.244)		Epithelial(121;7.82e-28)|OV - Ovarian serous cystadenocarcinoma(60;1.5e-13)|Kidney(56;3.04e-09)|KIRC - Kidney renal clear cell carcinoma(57;6.5e-08)|BRCA - Breast invasive adenocarcinoma(100;2.39e-05)|Lung(119;0.00519)|LUSC - Lung squamous cell carcinoma(224;0.0202)	NADH(DB00157)	aggagcccacggtcagggcca	0.562000													5	9					0	0	1	0	0
VCAM1	7412	broad.mit.edu	37	1	101186144	101186144	+	Missense_Mutation	SNP	G	G	C			TCGA-RW-A68C-01A-11D-A35D-08	TCGA-RW-A68C-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	8e70c54a-1063-4eaf-97f3-7fa8f05711e9	1afed359-ab74-4787-bffb-7f0635eba182	g.chr1:101186144G>C	ENST00000294728.2	+	2	278	c.177G>C	c.(175-177)tgG>tgC	p.W59C	VCAM1_ENST00000370115.1_Missense_Mutation_p.W59C|VCAM1_ENST00000347652.2_Missense_Mutation_p.W59C|VCAM1_ENST00000370119.4_Intron	NM_001078.3	NP_001069.1	P19320	VCAM1_HUMAN	vascular cell adhesion molecule 1	59	Ig-like C2-type 1.				heterophilic cell-cell adhesion|interferon-gamma-mediated signaling pathway|interspecies interaction between organisms|leukocyte tethering or rolling|membrane to membrane docking|positive regulation of T cell proliferation|regulation of immune response	alpha9-beta1 integrin-vascular cell adhesion molecule-1 complex|apical part of cell|external side of plasma membrane|extracellular space|filopodium|integral to membrane|microvillus|podosome	cell adhesion molecule binding|integrin binding			central_nervous_system(3)|endometrium(4)|haematopoietic_and_lymphoid_tissue(1)|kidney(2)|large_intestine(11)|liver(1)|lung(27)|skin(4)|upper_aerodigestive_tract(2)|urinary_tract(1)	56		all_epithelial(167;3.83e-06)|all_lung(203;0.000485)|Lung NSC(277;0.0011)		Epithelial(280;0.0227)|all cancers(265;0.0276)|COAD - Colon adenocarcinoma(174;0.149)|Colorectal(144;0.169)|Lung(183;0.196)	Carvedilol(DB01136)	TTTTCTCTTGGAGAACCCAGA	0.473000													5	57					0	0	1	0	0
VAV1	7409	broad.mit.edu	37	19	6821671	6821671	+	Silent	SNP	C	C	A	rs141823895	byFrequency	TCGA-RW-A68C-01A-11D-A35D-08	TCGA-RW-A68C-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	8e70c54a-1063-4eaf-97f3-7fa8f05711e9	1afed359-ab74-4787-bffb-7f0635eba182	g.chr19:6821671C>A	ENST00000304076.2	+	3	454	c.360C>A	c.(358-360)atC>atA	p.I120I	VAV1_ENST00000539284.1_Silent_p.I55I|VAV1_ENST00000602142.1_Silent_p.I120I|VAV1_ENST00000599806.1_Silent_p.I65I|VAV1_ENST00000596764.1_Silent_p.I120I	NM_001258206.1	NP_001245135.1	P15498	VAV_HUMAN	vav 1 guanine nucleotide exchange factor	120					apoptosis|induction of apoptosis by extracellular signals|nerve growth factor receptor signaling pathway|platelet activation|regulation of Rho protein signal transduction|small GTPase mediated signal transduction|T cell costimulation	cytosol|plasma membrane	metal ion binding|protein binding|sequence-specific DNA binding transcription factor activity	p.I120I(1)		biliary_tract(1)|breast(3)|central_nervous_system(2)|endometrium(3)|kidney(5)|large_intestine(16)|lung(18)|ovary(5)|prostate(2)|skin(5)|upper_aerodigestive_tract(2)	62						GGACCCCGATCGCCCAGAACA	0.627000													13	50					3.27435e-08	3.61902e-08	1	1	0
IFNA7	3444	broad.mit.edu	37	9	21202068	21202068	+	Missense_Mutation	SNP	G	G	A	rs140552953	byFrequency	TCGA-RW-A68C-01A-11D-A35D-08	TCGA-RW-A68C-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	8e70c54a-1063-4eaf-97f3-7fa8f05711e9	1afed359-ab74-4787-bffb-7f0635eba182	g.chr9:21202068G>A	ENST00000239347.3	-	1	136	c.97C>T	c.(97-99)Cgt>Tgt	p.R33C		NM_021057.2	NP_066401.2	P01567	IFNA7_HUMAN	interferon, alpha 7	33					blood coagulation|cell-cell signaling|regulation of type I interferon-mediated signaling pathway|response to virus|type I interferon-mediated signaling pathway	extracellular space	cytokine activity|interferon-alpha/beta receptor binding			endometrium(3)|kidney(1)|large_intestine(1)|liver(1)|lung(6)	12				GBM - Glioblastoma multiforme(5;4.75e-197)|Lung(24;1.26e-23)|LUSC - Lung squamous cell carcinoma(38;1.4e-13)		CTCCTATTACGCAGGCTGTGG	0.512000													5	106					0	0	1	0	0
HSD17B7P2	158160	broad.mit.edu	37	10	38654432	38654432	+	RNA	SNP	A	A	G	rs2257765		TCGA-RW-A68C-01A-11D-A35D-08	TCGA-RW-A68C-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	8e70c54a-1063-4eaf-97f3-7fa8f05711e9	1afed359-ab74-4787-bffb-7f0635eba182	g.chr10:38654432A>G	ENST00000494540.1	+	0	599					NR_003086.1																						TCATCTCGCAATGCAAGGAAA	0.453000													3	45					0	0	1	0	0
SLC25A21	89874	broad.mit.edu	37	14	37198737	37198737	+	Missense_Mutation	SNP	C	C	T			TCGA-RW-A68C-01A-11D-A35D-08	TCGA-RW-A68C-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	8e70c54a-1063-4eaf-97f3-7fa8f05711e9	1afed359-ab74-4787-bffb-7f0635eba182	g.chr14:37198737C>T	ENST00000331299.5	-	5	820	c.305G>A	c.(304-306)gGa>gAa	p.G102E	SLC25A21_ENST00000555449.1_Missense_Mutation_p.G102E	NM_030631.3	NP_085134.1	Q9BQT8	ODC_HUMAN	solute carrier family 25 (mitochondrial oxoadipate carrier), member 21	102					lysine catabolic process	integral to membrane|mitochondrial inner membrane	alpha-ketoglutarate transmembrane transporter activity|binding			NS(1)|haematopoietic_and_lymphoid_tissue(1)|large_intestine(2)|lung(2)|pancreas(1)|prostate(1)|skin(1)	9	Esophageal squamous(585;0.164)|Breast(36;0.179)|Hepatocellular(127;0.213)		Lung(8;2.16e-08)|LUAD - Lung adenocarcinoma(9;2.16e-07)|Epithelial(34;0.0112)|all cancers(34;0.0274)|LUSC - Lung squamous cell carcinoma(13;0.149)	GBM - Glioblastoma multiforme(112;0.00204)		TGACACATATCCCAGCAATTT	0.318000													8	46					0	0	1	0	0
KRT39	390792	broad.mit.edu	37	17	39122806	39122806	+	Missense_Mutation	SNP	T	T	A			TCGA-RW-A68C-01A-11D-A35D-08	TCGA-RW-A68C-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	8e70c54a-1063-4eaf-97f3-7fa8f05711e9	1afed359-ab74-4787-bffb-7f0635eba182	g.chr17:39122806T>A	ENST00000355612.2	-	1	338	c.303A>T	c.(301-303)caA>caT	p.Q101H	AC004231.2_ENST00000418393.1_RNA	NM_213656.3	NP_998821.3	Q6A163	K1C39_HUMAN	keratin 39	101	Coil 1A.|Rod.					intermediate filament	structural molecule activity			NS(1)|breast(1)|endometrium(3)|haematopoietic_and_lymphoid_tissue(1)|kidney(1)|large_intestine(1)|lung(8)|upper_aerodigestive_tract(1)	17		Breast(137;0.00043)|Ovarian(249;0.15)				CGTTCAAGATTTGCATGGTCT	0.443000													5	144					0	0	1	0	0
OLFM3	118427	broad.mit.edu	37	1	102270459	102270459	+	Missense_Mutation	SNP	C	C	T			TCGA-RW-A68C-01A-11D-A35D-08	TCGA-RW-A68C-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	8e70c54a-1063-4eaf-97f3-7fa8f05711e9	1afed359-ab74-4787-bffb-7f0635eba182	g.chr1:102270459C>T	ENST00000370103.4	-	6	925	c.712G>A	c.(712-714)Gac>Aac	p.D238N	OLFM3_ENST00000338858.5_Missense_Mutation_p.D258N|OLFM3_ENST00000462354.1_5'UTR|OLFM3_ENST00000536598.1_3'UTR	NM_058170.2	NP_477518.2	Q96PB7	NOE3_HUMAN	olfactomedin 3	258	Olfactomedin-like.					extracellular region				breast(1)|endometrium(1)|kidney(1)|large_intestine(8)|lung(24)|ovary(3)|prostate(1)|skin(1)|soft_tissue(1)|upper_aerodigestive_tract(2)	43		all_epithelial(167;1.87e-06)|all_lung(203;8.12e-05)|Lung NSC(277;0.000189)		all cancers(265;0.0843)|Epithelial(280;0.0921)|COAD - Colon adenocarcinoma(174;0.145)		GTATAACTGTCCATGTACCAG	0.373000													3	34					0	0	1	0	0
MUC2	4583	broad.mit.edu	37	11	1090952	1090954	+	In_Frame_Del	DEL	ACC	ACC	-	rs72655327		TCGA-RW-A68C-01A-11D-A35D-08	TCGA-RW-A68C-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	8e70c54a-1063-4eaf-97f3-7fa8f05711e9	1afed359-ab74-4787-bffb-7f0635eba182	g.chr11:1090952_1090954delACC	ENST00000441003.2	+	28	3874_3876	c.3847_3849delACC	c.(3847-3849)del	p.T1288del	MUC2_ENST00000359061.5_In_Frame_Del_p.T1289del	NM_002457.2	NP_002448.2	Q02817	MUC2_HUMAN	mucin 2, oligomeric mucus/gel-forming	1288						inner mucus layer|outer mucus layer	protein binding			NS(3)|breast(3)|central_nervous_system(1)|cervix(1)|endometrium(26)|haematopoietic_and_lymphoid_tissue(4)|kidney(11)|large_intestine(5)|lung(22)|ovary(2)|prostate(16)|skin(5)|stomach(1)|upper_aerodigestive_tract(2)	102		all_cancers(49;1.08e-07)|all_epithelial(84;5.08e-05)|Breast(177;0.000307)|Ovarian(85;0.000953)|Medulloblastoma(188;0.0109)|all_neural(188;0.0299)|Lung NSC(207;0.191)		BRCA - Breast invasive adenocarcinoma(625;0.000207)|Lung(200;0.0576)|LUSC - Lung squamous cell carcinoma(625;0.0703)	Pranlukast(DB01411)	cttcaccactaccaccaccacca	0.616													2	4	---	---	---	---