Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID OIT3 170392 broad.mit.edu 36 10 74354372 74354372 + Missense_Mutation SNP T T A novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 GSTO2 119391 broad.mit.edu 36 10 106047396 106047396 + Missense_Mutation SNP C C T novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 PACS1 55690 broad.mit.edu 36 11 65757102 65757102 + Silent SNP G G C novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 SERPINH1 871 broad.mit.edu 36 11 74960735 74960735 + Missense_Mutation SNP C C G novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 ITGB7 3695 broad.mit.edu 36 12 51876209 51876209 + Silent SNP G G A novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 CAPS2 84698 broad.mit.edu 36 12 73973365 73973365 + Missense_Mutation SNP C C A novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 N4BP2L2 10443 broad.mit.edu 36 13 31915740 31915740 + Missense_Mutation SNP G G T novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 ZNF828 283489 broad.mit.edu 36 13 114108760 114108760 + Silent SNP T T C novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 TGM7 116179 broad.mit.edu 36 15 41367123 41367123 + Silent SNP G G A novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 TIPIN 54962 broad.mit.edu 36 15 64428797 64428797 + Missense_Mutation SNP C C G novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 SNX29 92017 broad.mit.edu 36 16 12479143 12479143 + Missense_Mutation SNP C C T novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 CDH3 1001 broad.mit.edu 36 16 67273825 67273825 + Silent SNP C C T novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 SHPK 23729 broad.mit.edu 36 17 3471376 3471376 + Missense_Mutation SNP T T C novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 TP53 7157 broad.mit.edu 36 17 7514728 7514728 + Nonsense_Mutation SNP G G A novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 MYH4 4622 broad.mit.edu 36 17 10301583 10301583 + Missense_Mutation SNP G G T novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 G G T T G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 C17orf102 400591 broad.mit.edu 36 17 29928688 29928688 + Missense_Mutation SNP C C T novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 COL5A2 1290 broad.mit.edu 36 2 189612490 189612490 + Silent SNP A A C novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 A A C C A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 ACSL3 2181 broad.mit.edu 36 2 223494251 223494251 + Missense_Mutation SNP C C A novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 PPIL2 23759 broad.mit.edu 36 22 20369067 20369067 + Silent SNP G G A novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 ZBED4 9889 broad.mit.edu 36 22 48666474 48666474 + Missense_Mutation SNP C C G novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 NUP210 23225 broad.mit.edu 36 3 13335796 13335796 + Missense_Mutation SNP C C A novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 GRID2 2895 broad.mit.edu 36 4 93730328 93730328 + Missense_Mutation SNP A A C novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 A A C C A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 CDH18 1016 broad.mit.edu 36 5 19556547 19556547 + Silent SNP T T A novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 DMGDH 29958 broad.mit.edu 36 5 78358071 78358071 + Missense_Mutation SNP C C G novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 PPIC 5480 broad.mit.edu 36 5 122389422 122389422 + Missense_Mutation SNP A A C novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 A A C C A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 ADAMTS19 171019 broad.mit.edu 36 5 129098563 129098563 + Missense_Mutation SNP A A T novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 DOCK2 1794 broad.mit.edu 36 5 169416307 169416307 + Missense_Mutation SNP G G A novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 MYLK4 340156 broad.mit.edu 36 6 2634129 2634129 + Missense_Mutation SNP G G A novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 GABBR1 2550 broad.mit.edu 36 6 29706244 29706244 + Nonsense_Mutation SNP G G A novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 EPHA7 2045 broad.mit.edu 36 6 94009931 94009931 + Missense_Mutation SNP G G C novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 ABCA13 154664 broad.mit.edu 36 7 48399249 48399249 + Missense_Mutation SNP T T C novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 HIP1 3092 broad.mit.edu 36 7 75025480 75025480 + Missense_Mutation SNP T T G novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 T T G G T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 PLOD3 8985 broad.mit.edu 36 7 100643184 100643184 + Missense_Mutation SNP T T A novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 FOXP2 93986 broad.mit.edu 36 7 114071986 114071986 + Nonsense_Mutation SNP G G T novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 C7orf58 79974 broad.mit.edu 36 7 120664099 120664099 + Silent SNP A A G novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 PARP12 64761 broad.mit.edu 36 7 139393278 139393278 + Splice_Site SNP T T A novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 TRPV5 56302 broad.mit.edu 36 7 142336330 142336330 + Silent SNP G G A novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 RP1 6101 broad.mit.edu 36 8 55699974 55699974 + Missense_Mutation SNP C C G novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 KIF24 347240 broad.mit.edu 36 9 34246558 34246558 + Missense_Mutation SNP G G C novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 TRPM3 80036 broad.mit.edu 36 9 72615968 72615968 + Missense_Mutation SNP A A T novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 DCAF8L1 139425 broad.mit.edu 36 X 27908693 27908693 + Missense_Mutation SNP C C G novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 BCOR 54880 broad.mit.edu 36 X 39801518 39801518 + Nonsense_Mutation SNP C C A novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 HUWE1 10075 broad.mit.edu 36 X 53596376 53596376 + Missense_Mutation SNP C C T novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 HTR2C 3358 broad.mit.edu 36 X 114047863 114047863 + Missense_Mutation SNP C C G novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563 DDX26B 203522 broad.mit.edu 36 X 134534562 134534562 + Missense_Mutation SNP C C T novel none TCGA-61-2097-01A-02W-0722-08 TCGA-61-2097-11A-01W-0723-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 0764a7bf-1525-427a-b7c6-dddaf06d0e97 feb1104c-6bd9-4277-a599-478d60363563