Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
EPB41L3	23136	genome.wustl.edu	36	18	5479039	5479039	+	Silent	SNP	G	G	A	novel	unknown	TCGA-36-2540-01A-01D-1526-09	TCGA-36-2540-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	13757e2d-5237-4e3a-9608-a6faa584fd37	26315c8f-80bb-41cd-a7da-9ff24a7fb6eb	18	5479039	5479039	G	A	SNP	EPB41L3	NM_012307	human	genbank	54_36p	-1	provisional	silent	c.144	p.F48	0.298	NULL	HMMSmart_SM00295,superfamily_Ubiquitin-like,HMMPfam_FERM_N,PatternScan_FERM_1,superfamily_Second domain of FERM,HMMPfam_FERM_M,PatternScan_FERM_2,superfamily_PH domain-like,HMMPfam_FERM_C,HMMPfam_FA,HMMPfam_SAB,HMMPfam_4_1_CTD	-	no_errors
ZNF558	148156	genome.wustl.edu	36	19	8782997	8782997	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-36-2540-01A-01D-1526-09	TCGA-36-2540-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	13757e2d-5237-4e3a-9608-a6faa584fd37	26315c8f-80bb-41cd-a7da-9ff24a7fb6eb	19	8782997	8782997	T	C	SNP	ZNF558	NM_144693	human	genbank	54_36p	-1	provisional	missense	c.1169	p.Y390C	0.055	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
TLR8	51311	genome.wustl.edu	36	X	12847676	12847676	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-36-2540-01A-01D-1526-09	TCGA-36-2540-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	13757e2d-5237-4e3a-9608-a6faa584fd37	26315c8f-80bb-41cd-a7da-9ff24a7fb6eb	X	12847676	12847676	C	T	SNP	TLR8	NM_138636	human	genbank	54_36p	+1	reviewed	missense	c.596	p.T199M	0.000	superfamily_SSF52047	superfamily_SSF52058,HMMPfam_LRR_1,superfamily_SSF52047,HMMSmart_LRR_TYP,HMMSmart_LRRCT,superfamily_TIR,HMMPfam_TIR	-	no_errors
SLC17A8	246213	genome.wustl.edu	36	12	99330678	99330678	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-36-2540-01A-01D-1526-09	TCGA-36-2540-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	13757e2d-5237-4e3a-9608-a6faa584fd37	26315c8f-80bb-41cd-a7da-9ff24a7fb6eb	12	99330678	99330678	G	A	SNP	SLC17A8	NM_139319	human	genbank	54_36p	+1	validated	splice_site	c.1187-1	e10-1	1.000	-	-	-	no_errors
LRWD1	222229	genome.wustl.edu	36	7	101900197	101900197	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-36-2540-01A-01D-1526-09	TCGA-36-2540-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	13757e2d-5237-4e3a-9608-a6faa584fd37	26315c8f-80bb-41cd-a7da-9ff24a7fb6eb	7	101900197	101900197	G	A	SNP	LRWD1	NM_152892	human	genbank	54_36p	+1	provisional	missense	c.1744	p.V582I	0.008	superfamily_WD40_like	superfamily_SSF52058,HMMSmart_LRR_TYP,HMMPfam_LRR_1,superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors
SPAM1	6677	genome.wustl.edu	36	7	123381251	123381251	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-36-2540-01A-01D-1526-09	TCGA-36-2540-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	13757e2d-5237-4e3a-9608-a6faa584fd37	26315c8f-80bb-41cd-a7da-9ff24a7fb6eb	7	123381251	123381251	A	G	SNP	SPAM1	NM_003117	human	genbank	54_36p	+1	reviewed	missense	c.391	p.I131V	0.898	HMMPfam_Glyco_hydro_56,superfamily_Glyco_hydro_cat	HMMPfam_Glyco_hydro_56,superfamily_Glyco_hydro_cat	-	no_errors
DERL1	79139	genome.wustl.edu	36	8	124096919	124096919	+	Silent	SNP	G	G	A	novel	unknown	TCGA-36-2540-01A-01D-1526-09	TCGA-36-2540-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	13757e2d-5237-4e3a-9608-a6faa584fd37	26315c8f-80bb-41cd-a7da-9ff24a7fb6eb	8	124096919	124096919	G	A	SNP	DERL1	NM_024295	human	genbank	54_36p	-1	validated	silent	c.705	p.G235	0.834	NULL	HMMPfam_DER1	-	no_errors
MIRN663B	0	genome.wustl.edu	36	2	132731110	132731110	+	RNA	SNP	C	C	T	novel	unknown	TCGA-36-2540-01A-01D-1526-09	TCGA-36-2540-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	13757e2d-5237-4e3a-9608-a6faa584fd37	26315c8f-80bb-41cd-a7da-9ff24a7fb6eb	2	132731110	132731110	C	T	SNP	MIRN663B	ENST00000408361	human	ensembl	54_36p	-1	known	rna	NULL	NULL	0.016	-	-	-	no_errors