Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
MT-ND5	4540	genome.wustl.edu	36	MT	12690	12690	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	MT	12690	12690	T	A	SNP	MT-ND5	ENST00000361567	human	ensembl	54_36p	+1	known	missense	c.353	p.F118Y	NULL	HMMPfam_Oxidored_q1_N	HMMPfam_Oxidored_q1_N,HMMPfam_Oxidored_q1,HMMPfam_NADH5_C	-	no_errors
JARID1A	5927	genome.wustl.edu	36	12	275113	275113	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	12	275113	275113	G	A	SNP	JARID1A	NM_001042603	human	genbank	54_36p	-1	reviewed	missense	c.4342	p.L1448F	1.000	NULL	HMMSmart_SM00545,HMMSmart_SM00501,HMMSmart_SM00249,PatternScan_ZF_PHD_1,HMMSmart_SM00558	-	no_errors
CCDC77	84318	genome.wustl.edu	36	12	420355	420355	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	12	420355	420355	G	C	SNP	CCDC77	NM_032358	human	genbank	54_36p	+1	validated	missense	c.1252	p.E418Q	1.000	NULL	NULL	-	no_errors
WDR37	22884	genome.wustl.edu	36	10	1132163	1132163	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	10	1132163	1132163	C	A	SNP	WDR37	NM_014023	human	genbank	54_36p	+1	reviewed	missense	c.703	p.P235T	0.960	superfamily_WD40_like	superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors
SRRM2	23524	genome.wustl.edu	36	16	2755986	2755986	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	16	2755986	2755986	G	T	SNP	SRRM2	NM_016333	human	genbank	54_36p	+1	validated	missense	c.5456	p.G1819V	1.000	NULL	HMMPfam_cwf21	-	no_errors
FOXM1	2305	genome.wustl.edu	36	12	2838335	2838335	+	Silent	SNP	T	T	C	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	12	2838335	2838335	T	C	SNP	FOXM1	NM_202002	human	genbank	54_36p	-1	validated	silent	c.2136	p.Q712	0.756	NULL	"HMMSmart_SM00339,superfamily_""Winged helix"" DNA-binding domain,PatternScan_FORK_HEAD_1,HMMPfam_Fork_head,PatternScan_FORK_HEAD_2"	-	no_errors
HTT	3064	genome.wustl.edu	36	4	3158178	3158178	+	Silent	SNP	G	G	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	4	3158178	3158178	G	A	SNP	HTT	NM_002111	human	genbank	54_36p	+1	reviewed	silent	c.4923	p.L1641	1.000	NULL	superfamily_ARM repeat,HMMPfam_HEAT	-	no_errors
BTBD12	84464	genome.wustl.edu	36	16	3579992	3579992	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	16	3579992	3579992	C	G	SNP	BTBD12	NM_032444	human	genbank	54_36p	-1	provisional	missense	c.3648	p.Q1216H	0.001	NULL	superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00225	-	no_errors
HSPA12B	116835	genome.wustl.edu	36	20	3674608	3674608	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	20	3674608	3674608	G	C	SNP	HSPA12B	NM_052970	human	genbank	54_36p	+1	reviewed	missense	c.605	p.R202P	1.000	superfamily_SSF53067	PatternScan_HSP70_1,PatternScan_HSP70_2,PatternScan_HSP70_3,superfamily_SSF53067	-	no_errors
UBXN6	80700	genome.wustl.edu	36	19	4405023	4405023	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	19	4405023	4405023	C	T	SNP	UBXN6	NM_025241	human	genbank	54_36p	-1	provisional	missense	c.151	p.E51K	1.000	NULL	HMMPfam_PUB,HMMSmart_SM00580,superfamily_Ubiquitin-like,HMMSmart_SM00166,HMMPfam_UBX	-	no_errors
LOC442153	442153	genome.wustl.edu	36	6	4648062	4648062	+	RNA	SNP	C	C	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	6	4648062	4648062	C	A	SNP	LOC442153	XR_016425	human	genbank	54_36p	+1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
WSCD1	23302	genome.wustl.edu	36	17	5962128	5962128	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	17	5962128	5962128	C	T	SNP	WSCD1	NM_015253	human	genbank	54_36p	+1	validated	missense	c.1271	p.A424V	0.998	superfamily_SSF52540	HMMSmart_WSC,HMMPfam_WSC,superfamily_SSF52540	-	no_errors
TADA2B	93624	genome.wustl.edu	36	4	7107526	7107526	+	Silent	SNP	C	C	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	4	7107526	7107526	C	T	SNP	TADA2B	NM_152293	human	genbank	54_36p	+1	validated	silent	c.1107	p.Y369	0.990	NULL	HMMSmart_SM00291,PatternScan_ZF_ZZ_1,superfamily_Homeodomain-like,HMMSmart_SM00717,HMMPfam_Myb_DNA-binding	-	no_errors
AMAC1L3	643664	genome.wustl.edu	36	17	7326363	7326363	+	Silent	SNP	C	C	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	17	7326363	7326363	C	T	SNP	AMAC1L3	NM_001102614	human	genbank	54_36p	+1	provisional	silent	c.336	p.V112	1.000	superfamily_SSF103481	superfamily_SSF103481,HMMPfam_DUF6	-	no_errors
TP53	7157	genome.wustl.edu	36	17	7517783	7517783	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	17	7517783	7517783	C	A	SNP	TP53	NM_000546	human	genbank	54_36p	-1	reviewed	nonsense	c.880	p.E294*	0.009	NULL	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors
VCX	26609	genome.wustl.edu	36	X	7771259	7771259	+	Silent	SNP	G	G	C	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	X	7771259	7771259	G	C	SNP	VCX	NM_013452	human	genbank	54_36p	+1	reviewed	silent	c.15	p.P5	0.000	NULL	NULL	-	no_errors
PER1	5187	genome.wustl.edu	36	17	7985881	7985881	+	Silent	SNP	C	C	G	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	17	7985881	7985881	C	G	SNP	PER1	NM_002616	human	genbank	54_36p	-1	reviewed	silent	c.3567	p.R1189	0.997	NULL	HMMSmart_SM00091,superfamily_PYP-like sensor domain (PAS domain),HMMPfam_PAS_3	-	no_errors
OR7G3	390883	genome.wustl.edu	36	19	9097799	9097799	+	Silent	SNP	C	C	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	19	9097799	9097799	C	A	SNP	OR7G3	NM_001001958	human	genbank	54_36p	-1	provisional	silent	c.828	p.V276	0.091	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
LOC100132755	0	genome.wustl.edu	36	Y	10647825	10647825	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	Y	10647825	10647825	T	C	SNP	LOC100132755	XM_001713806	human	genbank	54_36p	+1	model	missense	c.20	p.I7T	1.000	NULL	NULL	-	no_errors
MPDZ	8777	genome.wustl.edu	36	9	13214390	13214390	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	9	13214390	13214390	T	A	SNP	MPDZ	NM_003829	human	genbank	54_36p	-1	validated	missense	c.376	p.I126F	1.000	superfamily_PDZ domain-like	HMMPfam_L27_2,superfamily_L27 domain,superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228	-	no_errors
WBP11	51729	genome.wustl.edu	36	12	14837945	14837945	+	Silent	SNP	T	T	C	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	12	14837945	14837945	T	C	SNP	WBP11	NM_016312	human	genbank	54_36p	-1	reviewed	silent	c.900	p.E300	0.984	NULL	HMMPfam_Wbp11	-	no_errors
LOC100130214	0	genome.wustl.edu	36	9	15458318	15458318	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	9	15458318	15458318	G	C	SNP	LOC100130214	XM_001716944	human	genbank	54_36p	-1	model	missense	c.59	p.P20R	0.396	NULL	NULL	-	no_start_codon:pseudogene
DDI2	84301	genome.wustl.edu	36	1	15837433	15837433	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	1	15837433	15837433	C	G	SNP	DDI2	NM_032341	human	genbank	54_36p	+1	provisional	missense	c.677	p.A226G	1.000	HMMPfam_Asp_protease,superfamily_Acid proteases	superfamily_Ubiquitin-like,HMMPfam_ubiquitin,HMMPfam_Asp_protease,superfamily_Acid proteases	-	no_errors
CYFIP1	23191	genome.wustl.edu	36	15	20549922	20549922	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	15	20549922	20549922	A	G	SNP	CYFIP1	NM_014608	human	genbank	54_36p	+1	validated	missense	c.3173	p.H1058R	1.000	HMMPfam_FragX_IP	HMMPfam_FragX_IP	-	no_errors
SLC6A5	9152	genome.wustl.edu	36	11	20592888	20592888	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	11	20592888	20592888	A	G	SNP	SLC6A5	NM_004211	human	genbank	54_36p	+1	validated	missense	c.1073	p.N358S	1.000	HMMPfam_SNF	HMMPfam_SNF,PatternScan_NA_NEUROTRAN_SYMP_1,PatternScan_NA_NEUROTRAN_SYMP_2,PatternScan_ASP_GLU_RACEMASE_1	-	no_errors
ZNF521	25925	genome.wustl.edu	36	18	21061393	21061393	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	18	21061393	21061393	G	A	SNP	ZNF521	NM_015461	human	genbank	54_36p	-1	validated	missense	c.487	p.R163C	1.000	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
KCNJ12	3768	genome.wustl.edu	36	17	21259375	21259375	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	17	21259375	21259375	G	A	SNP	KCNJ12	NM_021012	human	genbank	54_36p	+1	validated	missense	c.128	p.R43H	1.000	HMMPfam_IRK_N,superfamily_SSF81324	HMMPfam_IRK_N,superfamily_SSF81324,HMMPfam_IRK,superfamily_Ig_E-set	-	no_errors
LOC100128432	0	genome.wustl.edu	36	17	21833593	21833593	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	17	21833593	21833593	G	C	SNP	LOC100128432	XM_001723718	human	genbank	54_36p	+1	model	missense	c.118	p.V40L	0.000	NULL	NULL	-	no_errors
DHRS2	10202	genome.wustl.edu	36	14	23178033	23178033	+	Silent	SNP	G	G	C	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	14	23178033	23178033	G	C	SNP	DHRS2	NM_182908	human	genbank	54_36p	+1	validated	silent	c.120	p.V40	0.995	superfamily_NAD(P)-bd,HMMPfam_adh_short	superfamily_NAD(P)-bd,HMMPfam_adh_short,PatternScan_ADH_SHORT	-	no_errors
UPB1	51733	genome.wustl.edu	36	22	23236749	23236749	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	22	23236749	23236749	C	T	SNP	UPB1	NM_016327	human	genbank	54_36p	+1	reviewed	missense	c.397	p.L133F	1.000	superfamily_Carbon-nitrogen hydrolase,HMMPfam_CN_hydrolase	superfamily_Carbon-nitrogen hydrolase,HMMPfam_CN_hydrolase	-	no_errors
STC1	6781	genome.wustl.edu	36	8	23758373	23758373	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	8	23758373	23758373	T	C	SNP	STC1	NM_003155	human	genbank	54_36p	-1	reviewed	missense	c.599	p.D200G	1.000	HMMPfam_Stanniocalcin	HMMPfam_Stanniocalcin	-	no_errors
ATP12A	479	genome.wustl.edu	36	13	24163355	24163355	+	Silent	SNP	C	C	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	13	24163355	24163355	C	T	SNP	ATP12A	NM_001676	human	genbank	54_36p	+1	reviewed	silent	c.1035	p.A345	0.995	superfamily_Calcium ATPase transmembrane domain M,HMMPfam_E1-E2_ATPase	HMMPfam_Cation_ATPase_N,superfamily_Calcium ATPase transmembrane domain M,HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,superfamily_HAD-like,HMMPfam_Hydrolase,PatternScan_ATPASE_E1_E2,superfamily_Metal cation-transporting ATPase ATP-binding domain N,HMMPfam_Cation_ATPase_C	-	no_errors
FGR	2268	genome.wustl.edu	36	1	27814609	27814609	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	1	27814609	27814609	C	T	SNP	FGR	NM_001042729	human	genbank	54_36p	-1	reviewed	missense	c.941	p.R314Q	1.000	superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc	superfamily_SH3,HMMPfam_SH3_1,HMMSmart_SH3,superfamily_SSF55550,HMMSmart_SH2,HMMPfam_SH2,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR	-	no_errors
MVP	9961	genome.wustl.edu	36	16	29755637	29755637	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	16	29755637	29755637	A	G	SNP	MVP	NM_005115	human	genbank	54_36p	+1	reviewed	missense	c.766	p.T256A	0.995	HMMPfam_Vault	HMMPfam_Vault	-	no_errors
STT3B	201595	genome.wustl.edu	36	3	31634444	31634444	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	3	31634444	31634444	G	A	SNP	STT3B	NM_178862	human	genbank	54_36p	+1	provisional	missense	c.1132	p.A378T	1.000	HMMPfam_STT3	HMMPfam_STT3	-	no_errors
FRY	10129	genome.wustl.edu	36	13	31650460	31650460	+	Silent	SNP	C	C	G	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	13	31650460	31650460	C	G	SNP	FRY	NM_023037	human	genbank	54_36p	+1	validated	silent	c.2568	p.L856	0.999	NULL	PatternScan_GHMP_KINASES_ATP	-	no_errors
NCOA6	23054	genome.wustl.edu	36	20	32794759	32794759	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	20	32794759	32794759	G	T	SNP	NCOA6	NM_014071	human	genbank	54_36p	-1	reviewed	missense	c.2962	p.P988T	1.000	NULL	NULL	-	no_errors
CSMD2	114784	genome.wustl.edu	36	1	33884931	33884931	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	1	33884931	33884931	G	C	SNP	CSMD2	NM_052896	human	genbank	54_36p	-1	validated	missense	c.4558	p.L1520V	1.000	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032,PatternScan_GLYCOSYL_HYDROL_F10,PatternScan_IG_MHC	-	no_errors
PHF20	51230	genome.wustl.edu	36	20	33998939	33998939	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	20	33998939	33998939	G	C	SNP	PHF20	NM_016436	human	genbank	54_36p	+1	validated	missense	c.3015	p.Q1005H	1.000	NULL	superfamily_Tudor/PWWP/MBT,HMMSmart_SM00333,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1	-	no_errors
GRM4	2914	genome.wustl.edu	36	6	34167836	34167836	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	6	34167836	34167836	C	T	SNP	GRM4	NM_000841	human	genbank	54_36p	-1	reviewed	missense	c.538	p.A180T	1.000	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,PatternScan_G_PROTEIN_RECEP_F3_1	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,PatternScan_G_PROTEIN_RECEP_F3_1,HMMPfam_NCD3G,PatternScan_G_PROTEIN_RECEP_F3_2,HMMPfam_7tm_3,PatternScan_G_PROTEIN_RECEP_F3_3	-	no_errors
TULP1	7287	genome.wustl.edu	36	6	35575761	35575761	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	6	35575761	35575761	G	T	SNP	TULP1	NM_003322	human	genbank	54_36p	-1	reviewed	missense	c.1470	p.N490K	1.000	superfamily_Transcriptional factor tubby C-terminal domain,HMMPfam_Tub,PatternScan_TUB_1	superfamily_Transcriptional factor tubby C-terminal domain,HMMPfam_Tub,PatternScan_TUB_1,PatternScan_TUB_2	-	no_errors
EPHA10	284656	genome.wustl.edu	36	1	37969788	37969788	+	Silent	SNP	G	G	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	1	37969788	37969788	G	A	SNP	EPHA10	NM_001099439	human	genbank	54_36p	-1	validated	silent	c.1545	p.T515	0.029	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	HMMPfam_Ephrin_lbd,HMMSmart_SM00615,HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,PatternScan_RECEPTOR_TYR_KIN_V_1,PatternScan_RECEPTOR_TYR_KIN_V_2,HMMPfam_SAM_1,HMMSmart_SM00454,HMMSmart_SM00220,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,superfamily_Galactose-binding domain-like,superfamily_SAM/Pointed domain,superfamily_Protein kinase-like (PK-like),PatternScan_EGF_2	-	no_errors
MAP3K14	9020	genome.wustl.edu	36	17	40700833	40700833	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	17	40700833	40700833	G	T	SNP	MAP3K14	ENST00000344686	human	ensembl	54_36p	-1	known	missense	c.2046	p.H682Q	0.000	NULL	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
ZNF239	8187	genome.wustl.edu	36	10	43373453	43373453	+	Silent	SNP	A	A	G	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	10	43373453	43373453	A	G	SNP	ZNF239	NM_001099282	human	genbank	54_36p	-1	validated	silent	c.81	p.I27	0.002	NULL	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
HNRNPA3P1	10151	genome.wustl.edu	36	10	43605674	43605674	+	RNA	SNP	C	C	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	10	43605674	43605674	C	T	SNP	HNRNPA3P1	NR_002726	human	genbank	54_36p	-1	validated	rna	NULL	NULL	1.000	-	-	-	pseudogene
CKAP5	9793	genome.wustl.edu	36	11	46789171	46789171	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	11	46789171	46789171	C	G	SNP	CKAP5	NM_001008938	human	genbank	54_36p	-1	validated	missense	c.592	p.A198P	1.000	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_HEAT	-	no_errors
PSG8	440533	genome.wustl.edu	36	19	47950524	47950524	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	19	47950524	47950524	T	A	SNP	PSG8	NM_182707	human	genbank	54_36p	-1	validated	missense	c.1044	p.E348D	0.005	superfamily_SSF48726,HMMSmart_IGc2,HMMPfam_ig	HMMPfam_V-set,superfamily_SSF48726,HMMSmart_IG,HMMPfam_ig,HMMSmart_IGc2	-	no_errors
WDR13	64743	genome.wustl.edu	36	X	48345272	48345272	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	X	48345272	48345272	T	C	SNP	WDR13	NM_017883	human	genbank	54_36p	+1	reviewed	missense	c.988	p.S330P	1.000	superfamily_WD40 repeat-like	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	-	no_errors
CCNB3	85417	genome.wustl.edu	36	X	50107449	50107449	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	X	50107449	50107449	A	G	SNP	CCNB3	NM_033031	human	genbank	54_36p	+1	reviewed	missense	c.3895	p.K1299E	1.000	HMMPfam_Cyclin_C,superfamily_Cyclin-like,HMMSmart_SM00385	superfamily_Cyclin-like,HMMPfam_Cyclin_N,HMMSmart_SM00385,HMMPfam_Cyclin_C	-	no_errors
TEX264	51368	genome.wustl.edu	36	3	51693603	51693603	+	Silent	SNP	G	G	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	3	51693603	51693603	G	A	SNP	TEX264	NM_015926	human	genbank	54_36p	+1	validated	silent	c.393	p.V131	1.000	superfamily_Probable bacterial effector-binding domain	superfamily_Probable bacterial effector-binding domain	-	no_errors
LOC729120	729120	genome.wustl.edu	36	15	53522833	53522833	+	Silent	SNP	G	A	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	15	53522833	53522833	G	A	SNP	LOC729120	XM_001133204	human	genbank	54_36p	-1	model	silent	c.15	p.C5	0.431	NULL	superfamily_Thioesterase/thiol ester dehydrase-isomerase,HMMPfam_4HBT	-	no_errors
PSME4	23198	genome.wustl.edu	36	2	53987258	53987258	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	2	53987258	53987258	G	A	SNP	PSME4	NM_014614	human	genbank	54_36p	-1	validated	missense	c.2582	p.S861F	1.000	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_HEAT	-	no_errors
CLTC	1213	genome.wustl.edu	36	17	55111644	55111644	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	17	55111644	55111644	G	C	SNP	CLTC	NM_004859	human	genbank	54_36p	+1	reviewed	missense	c.2901	p.R967S	1.000	HMMPfam_Clathrin,HMMSmart_SM00299,superfamily_ARM repeat	superfamily_Clathrin heavy-chain terminal domain,HMMPfam_Clathrin_propel,HMMPfam_Clathrin-link,superfamily_ARM repeat,HMMPfam_Clathrin,HMMSmart_SM00299,superfamily_Protein prenylyltransferase	-	no_errors
SPRYD5	84767	genome.wustl.edu	36	11	55409567	55409567	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	11	55409567	55409567	C	G	SNP	SPRYD5	ENST00000327733	human	ensembl	54_36p	+1	known	missense	c.108	p.D36E	0.690	superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4	superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMPfam_zf-B_box,HMMSmart_SM00336,HMMPfam_SPRY	-	no_start_codon
OR8H3	390152	genome.wustl.edu	36	11	55646940	55646940	+	Silent	SNP	C	C	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	11	55646940	55646940	C	T	SNP	OR8H3	NM_001005201	human	genbank	54_36p	+1	provisional	silent	c.516	p.N172	0.029	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
SIGLEC12	89858	genome.wustl.edu	36	19	56695209	56695209	+	Silent	SNP	G	G	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	19	56695209	56695209	G	T	SNP	SIGLEC12	NM_053003	human	genbank	54_36p	-1	reviewed	silent	c.585	p.A195	0.001	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408	superfamily_Immunoglobulin,HMMPfam_V-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_C2-set_2,HMMPfam_ig	-	no_errors
TGS1	96764	genome.wustl.edu	36	8	56848767	56848767	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	8	56848767	56848767	G	A	SNP	TGS1	NM_024831	human	genbank	54_36p	+1	validated	missense	c.36	p.M12I	0.926	NULL	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_Methyltransf_15	-	no_errors
MYADM	91663	genome.wustl.edu	36	19	59069049	59069049	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	19	59069049	59069049	G	A	SNP	MYADM	NM_001020818	human	genbank	54_36p	+1	validated	missense	c.454	p.A152T	0.028	HMMPfam_MARVEL	HMMPfam_MARVEL	-	no_errors
DNAJC5	80331	genome.wustl.edu	36	20	62030217	62030217	+	Silent	SNP	C	C	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	20	62030217	62030217	C	T	SNP	DNAJC5	NM_025219	human	genbank	54_36p	+1	provisional	silent	c.75	p.N25	0.881	superfamily_Chaperone J-domain,HMMSmart_SM00271,HMMPfam_DnaJ	superfamily_Chaperone J-domain,HMMSmart_SM00271,HMMPfam_DnaJ,PatternScan_DNAJ_1	-	no_errors
NRXN2	9379	genome.wustl.edu	36	11	64175551	64175551	+	Silent	SNP	C	C	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	11	64175551	64175551	C	T	SNP	NRXN2	NM_015080	human	genbank	54_36p	-1	reviewed	silent	c.2670	p.Q890	0.996	superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2	superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2,HMMSmart_SM00181,HMMPfam_EGF,HMMSmart_SM00294	-	no_errors
VSIG4	11326	genome.wustl.edu	36	X	65170310	65170310	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	X	65170310	65170310	C	G	SNP	VSIG4	NM_007268	human	genbank	54_36p	-1	validated	missense	c.143	p.G48A	0.626	superfamily_Immunoglobulin,HMMPfam_V-set,HMMSmart_SM00409,HMMSmart_SM00406	superfamily_Immunoglobulin,HMMPfam_V-set,HMMSmart_SM00409,HMMSmart_SM00406,HMMSmart_SM00408,HMMPfam_ig	-	no_errors
LOC442572	442572	genome.wustl.edu	36	7	66388750	66388750	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	7	66388750	66388750	C	T	SNP	LOC442572	XM_499314	human	genbank	54_36p	+1	model	missense	c.965	p.P322L	0.000	NULL	NULL	-	no_errors
SLC8A3	6547	genome.wustl.edu	36	14	69703445	69703445	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	14	69703445	69703445	C	G	SNP	SLC8A3	NM_183002	human	genbank	54_36p	-1	reviewed	missense	c.1448	p.R483T	1.000	HMMSmart_SM00237,HMMPfam_Calx-beta	HMMPfam_Na_Ca_ex,HMMSmart_SM00237,HMMPfam_Calx-beta	-	no_errors
BAI3	577	genome.wustl.edu	36	6	69723316	69723316	+	Silent	SNP	C	C	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	6	69723316	69723316	C	A	SNP	BAI3	NM_001704	human	genbank	54_36p	+1	reviewed	silent	c.1419	p.G473	0.336	superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1	superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMSmart_SM00008,HMMPfam_HRM,HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2,PatternScan_G_PROTEIN_RECEP_F2_2	-	no_errors
CSPG4	1464	genome.wustl.edu	36	15	73762116	73762116	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	15	73762116	73762116	C	T	SNP	CSPG4	NM_001897	human	genbank	54_36p	-1	reviewed	missense	c.4670	p.R1557H	0.207	NULL	superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2,PatternScan_ATPASE_ALPHA_BETA	-	no_errors
EEF1A1	1915	genome.wustl.edu	36	6	74285932	74285932	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	6	74285932	74285932	C	T	SNP	EEF1A1	NM_001402	human	genbank	54_36p	-1	reviewed	nonsense	c.173	p.W58*	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_GTP_EFTU	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_GTP_EFTU,PatternScan_EFACTOR_GTP,superfamily_Translation proteins,HMMPfam_GTP_EFTU_D2,HMMPfam_GTP_EFTU_D3,superfamily_EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	-	no_errors
IDH3A	3419	genome.wustl.edu	36	15	76239582	76239582	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	15	76239582	76239582	A	T	SNP	IDH3A	NM_005530	human	genbank	54_36p	+1	reviewed	nonsense	c.268	p.K90*	1.000	superfamily_Isocitrate/Isopropylmalate dehydrogenase-like,HMMPfam_Iso_dh	superfamily_Isocitrate/Isopropylmalate dehydrogenase-like,HMMPfam_Iso_dh,PatternScan_IDH_IMDH	-	no_errors
HGS	9146	genome.wustl.edu	36	17	77271365	77271365	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	17	77271365	77271365	G	T	SNP	HGS	NM_004712	human	genbank	54_36p	+1	provisional	missense	c.901	p.A301S	0.992	NULL	HMMPfam_VHS,superfamily_ENTH/VHS domain,HMMSmart_SM00288,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00064,HMMPfam_FYVE,HMMPfam_UIM	-	no_errors
HGS	9146	genome.wustl.edu	36	17	77271366	77271366	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	17	77271366	77271366	C	T	SNP	HGS	NM_004712	human	genbank	54_36p	+1	provisional	missense	c.902	p.A301V	0.994	NULL	HMMPfam_FYVE,HMMSmart_SM00064,HMMPfam_VHS,HMMPfam_UIM,superfamily_ENTH/VHS domain,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00288	-	no_errors
CYSLTR1	10800	genome.wustl.edu	36	X	77415659	77415659	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	X	77415659	77415659	C	A	SNP	CYSLTR1	NM_006639	human	genbank	54_36p	-1	reviewed	missense	c.241	p.V81F	0.998	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	-	no_errors
GPR174	84636	genome.wustl.edu	36	X	78314147	78314147	+	Silent	SNP	A	A	C	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	X	78314147	78314147	A	C	SNP	GPR174	NM_032553	human	genbank	54_36p	+1	provisional	silent	c.987	p.T329	0.019	NULL	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors
EFTUD1	79631	genome.wustl.edu	36	15	80231058	80231058	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	15	80231058	80231058	T	G	SNP	EFTUD1	NM_024580	human	genbank	54_36p	-1	validated	missense	c.2792	p.Q931P	0.010	superfamily_Ribosomal protein S5 domain 2-like	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_GTP_EFTU,superfamily_Translation proteins,superfamily_EF-G C-terminal domain-like,superfamily_Ribosomal protein S5 domain 2-like,HMMPfam_EFG_IV,HMMPfam_EFG_C	-	no_errors
CYB5R4	51167	genome.wustl.edu	36	6	84676521	84676521	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	6	84676521	84676521	T	A	SNP	CYB5R4	ENST00000369679	human	ensembl	54_36p	+1	known	missense	c.326	p.L109Q	0.008	NULL	superfamily_Cytochrome b5-like heme/steroid binding domain,HMMPfam_Cyt-b5,PatternScan_CYTOCHROME_B5_1	-	no_errors
PRSS23	11098	genome.wustl.edu	36	11	86196629	86196629	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	11	86196629	86196629	C	T	SNP	PRSS23	NM_007173	human	genbank	54_36p	+1	validated	missense	c.296	p.T99M	1.000	NULL	superfamily_Trypsin-like serine proteases,HMMPfam_Trypsin,PatternScan_TRYPSIN_HIS	-	no_errors
GTF2B	2959	genome.wustl.edu	36	1	89095741	89095741	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	1	89095741	89095741	G	A	SNP	GTF2B	NM_001514	human	genbank	54_36p	-1	reviewed	nonsense	c.553	p.R185*	0.998	superfamily_Cyclin-like,HMMSmart_SM00385,HMMPfam_TFIIB	superfamily_Zinc beta-ribbon,HMMPfam_TFIIB_Zn_Ribbon,superfamily_Cyclin-like,HMMSmart_SM00385,HMMPfam_TFIIB,PatternScan_TFIIB	-	no_errors
C9orf79	286234	genome.wustl.edu	36	9	89689925	89689925	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	9	89689925	89689925	G	A	SNP	C9orf79	NM_178828	human	genbank	54_36p	+1	validated	missense	c.703	p.A235T	0.004	NULL	NULL	-	no_errors
LOC646784	646784	genome.wustl.edu	36	1	91262549	91262549	+	RNA	SNP	G	G	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	1	91262549	91262549	G	A	SNP	LOC646784	XR_017249	human	genbank	54_36p	+1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
FAT3	120114	genome.wustl.edu	36	11	92174236	92174236	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	11	92174236	92174236	G	T	SNP	FAT3	NM_001008781	human	genbank	54_36p	+1	validated	missense	c.8409	p.K2803N	1.000	superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like,HMMSmart_SM00112,PatternScan_CADHERIN_1	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Concanavalin A-like lectins/glucanases,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMSmart_SM00282,HMMPfam_Laminin_G_2,HMMSmart_SM00179,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_CA,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2	-	no_errors
CHD1	1105	genome.wustl.edu	36	5	98252689	98252689	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	5	98252689	98252689	C	G	SNP	CHD1	NM_001270	human	genbank	54_36p	-1	reviewed	missense	c.2334	p.E778D	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_Chromo domain-like,HMMSmart_SM00298,HMMPfam_Chromo,PatternScan_CHROMO_1,HMMSmart_SM00487,HMMPfam_SNF2_N,HMMSmart_SM00490,HMMPfam_Helicase_C,superfamily_Homeodomain-like	-	no_errors
ARPC1B	10095	genome.wustl.edu	36	7	98822312	98822312	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	7	98822312	98822312	G	A	SNP	ARPC1B	NM_005720	human	genbank	54_36p	+1	reviewed	missense	c.133	p.V45M	1.000	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	-	no_errors
GPR15	2838	genome.wustl.edu	36	3	99733834	99733834	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	3	99733834	99733834	G	C	SNP	GPR15	NM_005290	human	genbank	54_36p	+1	provisional	missense	c.267	p.W89C	1.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
COL17A1	1308	genome.wustl.edu	36	10	105788212	105788212	+	Silent	SNP	C	C	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	10	105788212	105788212	C	T	SNP	COL17A1	NM_000494	human	genbank	54_36p	-1	reviewed	silent	c.3012	p.P1004	0.777	NULL	HMMPfam_Collagen	-	no_errors
COG5	10466	genome.wustl.edu	36	7	106664176	106664176	+	Silent	SNP	A	A	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	7	106664176	106664176	A	T	SNP	COG5	NM_006348	human	genbank	54_36p	-1	validated	silent	c.2139	p.P713	0.998	NULL	HMMPfam_COG5	-	no_errors
NPNT	255743	genome.wustl.edu	36	4	107083030	107083030	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	4	107083030	107083030	G	A	SNP	NPNT	NM_001033047	human	genbank	54_36p	+1	validated	nonsense	c.881	p.W294*	0.089	NULL	superfamily_Growth factor receptor domain,HMMSmart_SM00181,HMMPfam_EGF_2,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_SM00179,PatternScan_ASX_HYDROXYL,superfamily_EGF/Laminin,HMMSmart_SM00137,HMMPfam_MAM	-	no_errors
COL4A5	1287	genome.wustl.edu	36	X	107810629	107810629	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	X	107810629	107810629	G	C	SNP	COL4A5	NM_033380	human	genbank	54_36p	+1	reviewed	missense	c.4007	p.G1336A	1.000	HMMPfam_Collagen	HMMPfam_Collagen,superfamily_C-type_lectin_fold,HMMPfam_C4,HMMSmart_C4	-	no_errors
IRS4	8471	genome.wustl.edu	36	X	107863705	107863705	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	X	107863705	107863705	G	T	SNP	IRS4	NM_003604	human	genbank	54_36p	-1	reviewed	missense	c.2526	p.D842E	0.279	NULL	superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH,HMMPfam_IRS,HMMSmart_PTBI	-	no_errors
RAB20	55647	genome.wustl.edu	36	13	109974092	109974092	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	13	109974092	109974092	C	A	SNP	RAB20	NM_017817	human	genbank	54_36p	-1	provisional	missense	c.626	p.R209I	0.952	superfamily_P-loop containing nucleoside triphosphate hydrolases	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00173,HMMPfam_Ras,HMMSmart_SM00175,HMMSmart_SM00174	-	no_errors
MUSK	4593	genome.wustl.edu	36	9	112602595	112602595	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	9	112602595	112602595	G	A	SNP	MUSK	NM_005592	human	genbank	54_36p	+1	validated	missense	c.2116	p.A706T	1.000	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220	PatternScan_TUBULIN_B_AUTOREG,superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_Fz,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR	-	no_errors
OR2K2	26248	genome.wustl.edu	36	9	113130412	113130412	+	Silent	SNP	G	G	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	9	113130412	113130412	G	T	SNP	OR2K2	NM_205859	human	genbank	54_36p	-1	provisional	silent	c.123	p.G41	0.539	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
TDRD1	56165	genome.wustl.edu	36	10	115970593	115970593	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	10	115970593	115970593	G	T	SNP	TDRD1	NM_198795	human	genbank	54_36p	+1	reviewed	splice_site	c.2770+1	e18+1	0.969	-	-	-	no_errors
SLC25A43	203427	genome.wustl.edu	36	X	118471038	118471038	+	Silent	SNP	T	T	C	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	X	118471038	118471038	T	C	SNP	SLC25A43	NM_145305	human	genbank	54_36p	+1	provisional	silent	c.1008	p.P336	0.236	NULL	superfamily_Mitochondrial carrier,HMMPfam_Mito_carr	-	no_errors
XIAP	331	genome.wustl.edu	36	X	122862033	122862033	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	X	122862033	122862033	T	C	SNP	XIAP	NM_001167	human	genbank	54_36p	+1	reviewed	missense	c.1109	p.I370T	0.121	superfamily_SSF57924	PatternScan_ZF_RING_1,superfamily_SSF57924,HMMSmart_BIR,PatternScan_BIR_REPEAT_1,HMMPfam_BIR,HMMSmart_RING	-	no_errors
OR10G8	219869	genome.wustl.edu	36	11	123406350	123406350	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	11	123406350	123406350	G	T	SNP	OR10G8	NM_001004464	human	genbank	54_36p	+1	provisional	missense	c.811	p.V271L	0.126	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	-	no_errors
ADAM12	8038	genome.wustl.edu	36	10	127796682	127796682	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	10	127796682	127796682	C	T	SNP	ADAM12	NM_003474	human	genbank	54_36p	-1	reviewed	missense	c.527	p.R176Q	0.005	NULL	"HMMPfam_Pep_M12B_propep,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin,HMMPfam_Disintegrin,HMMSmart_SM00050,superfamily_Blood coagulation inhibitor (disintegrin),PatternScan_DISINTEGRIN_1,HMMSmart_SM00608,HMMPfam_ADAM_CR,HMMPfam_EGF_2"	-	no_errors
XPNPEP2	7512	genome.wustl.edu	36	X	128708379	128708379	+	Silent	SNP	G	G	C	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	X	128708379	128708379	G	C	SNP	XPNPEP2	ENST00000371105	human	ensembl	54_36p	+1	known	silent	c.531	p.T177	0.000	NULL	superfamily_SSF53092,HMMPfam_Creatinase_N	-	no_errors
PTGES2	80142	genome.wustl.edu	36	9	129924514	129924514	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	9	129924514	129924514	A	C	SNP	PTGES2	NM_025072	human	genbank	54_36p	-1	reviewed	missense	c.953	p.V318G	1.000	superfamily_GST_C_like,HMMPfam_GST_C	superfamily_Thiordxn-like_fd,HMMPfam_Glutaredoxin,PatternScan_GLUTAREDOXIN_1,superfamily_GST_C_like,HMMPfam_GST_C	-	no_errors
A4GNT	51146	genome.wustl.edu	36	3	139325902	139325902	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	3	139325902	139325902	G	A	SNP	A4GNT	NM_016161	human	genbank	54_36p	-1	reviewed	missense	c.917	p.T306I	0.974	HMMPfam_Gb3_synth	HMMPfam_Gly_transf_sug,HMMPfam_Gb3_synth	-	no_errors
ZMAT2	153527	genome.wustl.edu	36	5	140060239	140060239	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	5	140060239	140060239	G	C	SNP	ZMAT2	NM_144723	human	genbank	54_36p	+1	provisional	missense	c.10	p.G4R	1.000	NULL	HMMSmart_SM00451,superfamily_C2H2 and C2HC zinc fingers,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
CACNA1B	774	genome.wustl.edu	36	9	140087829	140087829	+	Silent	SNP	G	G	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	9	140087829	140087829	G	A	SNP	CACNA1B	NM_000718	human	genbank	54_36p	+1	validated	silent	c.4743	p.Q1581	1.000	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ	-	no_errors
PCDHB2	56133	genome.wustl.edu	36	5	140456450	140456450	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	5	140456450	140456450	T	G	SNP	PCDHB2	NM_018936	human	genbank	54_36p	+1	reviewed	missense	c.1892	p.L631R	0.003	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA	HMMPfam_Cadherin_2,superfamily_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors
PCDHB8	56128	genome.wustl.edu	36	5	140539551	140539551	+	Silent	SNP	C	C	G	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	5	140539551	140539551	C	G	SNP	PCDHB8	NM_019120	human	genbank	54_36p	+1	reviewed	silent	c.1752	p.G584	0.983	superfamily_Cadherin,HMMPfam_Cadherin	HMMPfam_Cadherin_2,superfamily_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors
FLJ43860	389690	genome.wustl.edu	36	8	142546725	142546725	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	8	142546725	142546725	T	C	SNP	FLJ43860	NM_207414	human	genbank	54_36p	-1	validated	missense	c.2278	p.M760V	0.208	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_HEAT	-	pseudogene
GJA8	2703	genome.wustl.edu	36	1	145847615	145847615	+	Silent	SNP	G	G	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	1	145847615	145847615	G	A	SNP	GJA8	NM_005267	human	genbank	54_36p	+1	validated	silent	c.909	p.K303	0.912	HMMPfam_Connexin50	HMMPfam_Connexin,HMMSmart_CNX,PatternScan_CONNEXINS_1,HMMPfam_Connexin_CCC,PatternScan_CONNEXINS_2,HMMPfam_Connexin50	-	no_errors
GABRA3	2556	genome.wustl.edu	36	X	151087640	151087640	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	X	151087640	151087640	C	T	SNP	GABRA3	NM_000808	human	genbank	54_36p	-1	reviewed	missense	c.1195	p.V399M	1.000	superfamily_Neu_channel_TM,HMMPfam_Neur_chan_memb	superfamily_Neur_chan_LBD,HMMPfam_Neur_chan_LBD,PatternScan_NEUROTR_ION_CHANNEL,superfamily_Neu_channel_TM,HMMPfam_Neur_chan_memb	-	no_errors
PLEKHG1	57480	genome.wustl.edu	36	6	151193879	151193879	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	6	151193879	151193879	G	C	SNP	PLEKHG1	NM_001029884	human	genbank	54_36p	+1	provisional	missense	c.1939	p.G647R	0.995	NULL	superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	-	no_errors
MED12L	116931	genome.wustl.edu	36	3	152585533	152585533	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	3	152585533	152585533	A	G	SNP	MED12L	NM_053002	human	genbank	54_36p	+1	validated	missense	c.4847	p.E1616G	1.000	NULL	HMMPfam_Med12	-	no_errors
SYNE1	23345	genome.wustl.edu	36	6	152713016	152713016	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	6	152713016	152713016	G	C	SNP	SYNE1	NM_182961	human	genbank	54_36p	-1	reviewed	missense	c.11881	p.Q3961E	1.000	superfamily_Spectrin repeat,HMMPfam_Spectrin,HMMSmart_SM00150	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2,superfamily_Spectrin repeat,HMMSmart_SM00150,HMMPfam_Spectrin,HMMPfam_KASH	-	no_errors
MFAP3	4238	genome.wustl.edu	36	5	153413429	153413429	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	5	153413429	153413429	A	C	SNP	MFAP3	NM_005927	human	genbank	54_36p	+1	validated	missense	c.1052	p.N351T	0.003	NULL	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig	-	no_errors
ITK	3702	genome.wustl.edu	36	5	156591974	156591974	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	5	156591974	156591974	T	G	SNP	ITK	NM_005546	human	genbank	54_36p	+1	reviewed	missense	c.760	p.L254V	0.949	superfamily_SH3-domain,superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00107,HMMPfam_BTK,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR	-	no_errors
SPTA1	6708	genome.wustl.edu	36	1	156921664	156921664	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	1	156921664	156921664	C	T	SNP	SPTA1	NM_003126	human	genbank	54_36p	-1	reviewed	missense	c.122	p.R41Q	1.000	superfamily_Spectrin repeat,HMMPfam_Spectrin	superfamily_Spectrin repeat,HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_EF-hand,HMMPfam_efhand_Ca_insen	-	no_errors
CLCN3	1182	genome.wustl.edu	36	4	170837899	170837899	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	4	170837899	170837899	G	A	SNP	CLCN3	NM_173872	human	genbank	54_36p	+1	validated	missense	c.284	p.R95Q	0.992	NULL	superfamily_Cl-channel_core,HMMPfam_Voltage_CLC,HMMPfam_CBS,HMMSmart_CBS,superfamily_SSF54631	-	no_errors
TTN	7273	genome.wustl.edu	36	2	179203287	179203287	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	2	179203287	179203287	C	G	SNP	TTN	ENST00000375038	human	ensembl	54_36p	-1	known	missense	c.32153	p.C10718S	0.997	HMMSmart_SM00409,superfamily_Concanavalin A-like lectins/glucanases,superfamily_WD40 repeat-like,HMMPfam_I-set,superfamily_Immunoglobulin,superfamily_vWA-like,superfamily_Positive stranded ssRNA viruses	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,superfamily_Fibronectin type III,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Protein kinase-like (PK-like),superfamily_WD40 repeat-like,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1,superfamily_Immunoglobulin,superfamily_vWA-like,superfamily_Positive stranded ssRNA viruses	-	no_errors
TTN	7273	genome.wustl.edu	36	2	179290160	179290160	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	2	179290160	179290160	G	T	SNP	TTN	ENST00000375038	human	ensembl	54_36p	-1	known	missense	c.21814	p.L7272I	1.000	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,superfamily_Concanavalin A-like lectins/glucanases,superfamily_WD40 repeat-like,HMMPfam_I-set,superfamily_Immunoglobulin,superfamily_vWA-like,superfamily_Positive stranded ssRNA viruses	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,superfamily_Fibronectin type III,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Protein kinase-like (PK-like),superfamily_WD40 repeat-like,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1,superfamily_Immunoglobulin,superfamily_vWA-like,superfamily_Positive stranded ssRNA viruses	-	no_errors
ZNF804A	91752	genome.wustl.edu	36	2	185509016	185509016	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	2	185509016	185509016	T	G	SNP	ZNF804A	NM_194250	human	genbank	54_36p	+1	provisional	missense	c.648	p.F216L	1.000	NULL	HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
WDR75	84128	genome.wustl.edu	36	2	190035503	190035503	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	2	190035503	190035503	G	A	SNP	WDR75	NM_032168	human	genbank	54_36p	+1	provisional	missense	c.827	p.R276H	0.754	superfamily_WD40_like,HMMSmart_WD40	PatternScan_WD_REPEATS_1,HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40	-	no_errors
PPP1R15B	84919	genome.wustl.edu	36	1	202645333	202645333	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	1	202645333	202645333	C	G	SNP	PPP1R15B	NM_032833	human	genbank	54_36p	-1	validated	missense	c.1830	p.Q610H	0.302	HMMPfam_PP1c_bdg	HMMPfam_CReP_N,HMMPfam_PP1c_bdg	-	no_errors
OPN3	23596	genome.wustl.edu	36	1	239827735	239827735	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	1	239827735	239827735	G	C	SNP	OPN3	NM_014322	human	genbank	54_36p	-1	reviewed	missense	c.881	p.S294W	1.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_OPSIN	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,PatternScan_OPSIN	-	no_errors
RNF151	146310	genome.wustl.edu	36	16	1958850	1958851	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	-	-					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	16	1958850	1958851	-	C	INS	RNF151	NM_174903	human	genbank	54_36p	+1	provisional	frame_shift_ins	c.661_662	p.E221fs	0.849:0.822	NULL	superfamily_SSF57850,HMMSmart_RING,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,superfamily_Traf_like	-	no_errors
SMG1	23049	genome.wustl.edu	36	16	18782579	18782601	+	Frame_Shift_Del	DEL	TTGAGATGTAGCACTCACATGCT	TTGAGATGTAGCACTCACATGCT	-	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	TTGAGATGTAGCACTCACATGCT	TTGAGATGTAGCACTCACATGCT					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	16	18782579	18782601	TTGAGATGTAGCACTCACATGCT	-	DEL	SMG1	NM_015092	human	genbank	54_36p	-1	reviewed	frame_shift_del	c.3589_3567	p.K1189fs	0.817:0.588:0.993:0.994:0.987:0.999:1.000:1.000:1.000:1.000:0.999:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.996:0.921:1.000:1.000:0.998	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_HEAT,superfamily_Protein kinase-like (PK-like),HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,PatternScan_PI3_4_KINASE_2,HMMPfam_FATC	(deletion:cds_exon[18782473,18782674])	no_errors
MED15	51586	genome.wustl.edu	36	22	19250813	19250814	+	In_Frame_Ins	INS	-	-	CAG	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	-	-					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	22	19250813	19250814	-	CAG	INS	MED15	NM_001003891	human	genbank	54_36p	+1	reviewed	in_frame_ins	c.750_751	p.254in_frame_insQ	0.997:0.998	NULL	HMMPfam_ARC105_Med_act	-	no_errors
RPL14	9045	genome.wustl.edu	36	3	40478524	40478525	+	In_Frame_Ins	INS	-	-	CTGCTG	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	-	-					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	3	40478524	40478525	-	CTGCTG	INS	RPL14	NM_001034996	human	genbank	54_36p	+1	reviewed	in_frame_ins	c.445_446	p.153in_frame_insAA	0.360:0.270	NULL	HMMPfam_Ribosomal_L14e	-	no_errors
LOC728115	728115	genome.wustl.edu	36	18	55834885	55834893	+	RNA	DEL	AAAAAAAAA	AAAAAAAAA	-	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	AAAAAAAAA	AAAAAAAAA					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	18	55834885	55834893	AAAAAAAAA	-	DEL	LOC728115	XR_038858	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.023:0.025:0.028:0.029:0.031:0.032:0.033:0.033:0.033	-	-	(deletion:rna[55832836,55835854])	pseudogene
CTTNBP2	83992	genome.wustl.edu	36	7	117219083	117219084	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	-	-					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	7	117219083	117219084	-	T	INS	CTTNBP2	NM_033427	human	genbank	54_36p	-1	reviewed	frame_shift_ins	c.1403_1402	p.S468fs	1.000:1.000	HMMPfam_CortBP2	HMMPfam_CortBP2,superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	-	no_errors
CNTNAP5	129684	genome.wustl.edu	36	2	124948826	124948826	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	2	124948826	124948826	C	-	DEL	CNTNAP5	NM_130773	human	genbank	54_36p	+1	reviewed	frame_shift_del	c.959	p.L322fs	1.000	superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_2	PatternScan_FA58C_1,PatternScan_FIBRIN_AG_C_DOMAIN,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_FA58C,superfamily_Gal_bind_like,HMMPfam_F5_F8_type_C,PatternScan_FA58C_2,superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_2,HMMSmart_EGF,HMMPfam_EGF,superfamily_Fibrinogen_a/b/g_C	(deletion:cds_exon[124948786,124948926])	no_errors
LARP1	23367	genome.wustl.edu	36	5	154152528	154152529	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	-	-					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	5	154152528	154152529	-	A	INS	LARP1	NM_033551	human	genbank	54_36p	+1	validated	frame_shift_ins	c.718_719	p.R240fs	0.999:0.986	NULL	"superfamily_""Winged helix"" DNA-binding domain,HMMSmart_SM00715,HMMPfam_La,PatternScan_CYTOCHROME_B5_1,HMMSmart_SM00684"	-	no_errors
TIAM2	26230	genome.wustl.edu	36	6	155619863	155619863	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-30-1718-01A-01W-0633-09	TCGA-30-1718-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	12be6c2a-d39a-405a-ba8e-9c22bc759202	637618e3-c2a3-416b-82c1-a86b025e8bff	6	155619863	155619863	A	-	DEL	TIAM2	NM_012454	human	genbank	54_36p	+1	reviewed	frame_shift_del	c.5022	p.E1675fs	0.821	NULL	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00455,superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,PatternScan_DH_1	(deletion:cds_exon[155619310,155619947])	no_errors