Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COMMD3 23412 hgsc.bcm.edu 36 10 22645363 22645363 + Missense_Mutation SNP C C T novel TCGA-25-1634-01A-01W-0615-10 TCGA-25-1634-10A-01W-0616-10 C C . . . . Unknown Untested Somatic Phase_III WXS none SOLID d0160665-14ea-4a35-aa77-2ed8e8ed57bd 13deb201-82f8-423c-abd4-c496b6dc342a EIF3E 3646 hgsc.bcm.edu 36 8 109284401 109284401 + Missense_Mutation SNP T T A novel TCGA-25-1634-01A-01W-0615-10 TCGA-25-1634-10A-01W-0616-10 T T . . . . Unknown Untested Somatic Phase_III WXS none SOLID d0160665-14ea-4a35-aa77-2ed8e8ed57bd 13deb201-82f8-423c-abd4-c496b6dc342a EIF3E 3646 hgsc.bcm.edu 36 8 109284401 109284401 + Frame_Shift_Del DEL T T - novel TCGA-25-1634-01A-01W-0615-10 TCGA-25-1634-10A-01W-0616-10 T T . . . . Unknown Untested Somatic Phase_III WXS none SOLID d0160665-14ea-4a35-aa77-2ed8e8ed57bd 13deb201-82f8-423c-abd4-c496b6dc342a FERD3L 222894 hgsc.bcm.edu 36 7 19151271 19151272 + In_Frame_Ins INS - - TCT rs34966908 TCGA-25-1634-01A-01W-0615-10 TCGA-25-1634-10A-01W-0616-10 - - . . . . Unknown Untested Somatic Phase_III WXS none SOLID d0160665-14ea-4a35-aa77-2ed8e8ed57bd 13deb201-82f8-423c-abd4-c496b6dc342a NBPF14 25832 hgsc.bcm.edu 36 1 146476133 146476133 + Missense_Mutation SNP C C T novel TCGA-25-1634-01A-01W-0615-10 TCGA-25-1634-10A-01W-0616-10 C C . . . . Unknown Untested Somatic Phase_III WXS none SOLID d0160665-14ea-4a35-aa77-2ed8e8ed57bd 13deb201-82f8-423c-abd4-c496b6dc342a RBM25 58517 hgsc.bcm.edu 36 14 72645841 72645841 + Missense_Mutation SNP A A G novel TCGA-25-1634-01A-01W-0615-10 TCGA-25-1634-10A-01W-0616-10 A A . . . . Unknown Untested Somatic Phase_III WXS none SOLID d0160665-14ea-4a35-aa77-2ed8e8ed57bd 13deb201-82f8-423c-abd4-c496b6dc342a TBX3 6926 hgsc.bcm.edu 36 12 113599811 113599811 + Frame_Shift_Del DEL C C - novel TCGA-25-1634-01A-01W-0615-10 TCGA-25-1634-10A-01W-0616-10 C C . . . . Unknown Untested Somatic Phase_III WXS none SOLID d0160665-14ea-4a35-aa77-2ed8e8ed57bd 13deb201-82f8-423c-abd4-c496b6dc342a ZNF286A 57335 hgsc.bcm.edu 36 17 15552269 15552269 + Missense_Mutation SNP C C T novel TCGA-25-1634-01A-01W-0615-10 TCGA-25-1634-10A-01W-0616-10 C C . . . . Unknown Untested Somatic Phase_III WXS none SOLID d0160665-14ea-4a35-aa77-2ed8e8ed57bd 13deb201-82f8-423c-abd4-c496b6dc342a ART3 419 hgsc.bcm.edu 36 4 77222084 77222084 + Silent SNP C C T novel TCGA-25-1634-01A-01W-0615-10 TCGA-25-1634-10A-01W-0616-10 C C C T C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID d0160665-14ea-4a35-aa77-2ed8e8ed57bd 13deb201-82f8-423c-abd4-c496b6dc342a ATP13A4 84239 hgsc.bcm.edu 36 3 194607799 194607799 + Silent SNP G G T novel TCGA-25-1634-01A-01W-0615-10 TCGA-25-1634-10A-01W-0616-10 G G G T G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID d0160665-14ea-4a35-aa77-2ed8e8ed57bd 13deb201-82f8-423c-abd4-c496b6dc342a COPS5 10987 hgsc.bcm.edu 36 8 68136660 68136660 + Silent SNP C C A novel TCGA-25-1634-01A-01W-0615-10 TCGA-25-1634-10A-01W-0616-10 C C C A C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID d0160665-14ea-4a35-aa77-2ed8e8ed57bd 13deb201-82f8-423c-abd4-c496b6dc342a GBP5 115362 hgsc.bcm.edu 36 1 89503201 89503201 + Missense_Mutation SNP A A T novel TCGA-25-1634-01A-01W-0615-10 TCGA-25-1634-10A-01W-0616-10 A A A T A A Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID d0160665-14ea-4a35-aa77-2ed8e8ed57bd 13deb201-82f8-423c-abd4-c496b6dc342a GDPD5 81544 hgsc.bcm.edu 36 11 74866335 74866335 + Missense_Mutation SNP G G A novel TCGA-25-1634-01A-01W-0615-10 TCGA-25-1634-10A-01W-0616-10 G G G A G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID d0160665-14ea-4a35-aa77-2ed8e8ed57bd 13deb201-82f8-423c-abd4-c496b6dc342a GPRC6A 222545 hgsc.bcm.edu 36 6 117237275 117237275 + Silent SNP A A G novel TCGA-25-1634-01A-01W-0615-10 TCGA-25-1634-10A-01W-0616-10 A A A G A A Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID d0160665-14ea-4a35-aa77-2ed8e8ed57bd 13deb201-82f8-423c-abd4-c496b6dc342a NUF2 83540 hgsc.bcm.edu 36 1 161576840 161576840 + Missense_Mutation SNP G G C novel TCGA-25-1634-01A-01W-0615-10 TCGA-25-1634-10A-01W-0616-10 G G G C G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID d0160665-14ea-4a35-aa77-2ed8e8ed57bd 13deb201-82f8-423c-abd4-c496b6dc342a RBL2 5934 hgsc.bcm.edu 36 16 52055717 52055717 + Missense_Mutation SNP C C G novel TCGA-25-1634-01A-01W-0615-10 TCGA-25-1634-10A-01W-0616-10 C C C G C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID d0160665-14ea-4a35-aa77-2ed8e8ed57bd 13deb201-82f8-423c-abd4-c496b6dc342a U2AF2 11338 hgsc.bcm.edu 36 19 60871699 60871699 + Missense_Mutation SNP G G A novel TCGA-25-1634-01A-01W-0615-10 TCGA-25-1634-10A-01W-0616-10 G G G A G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID d0160665-14ea-4a35-aa77-2ed8e8ed57bd 13deb201-82f8-423c-abd4-c496b6dc342a CHRND 1144 hgsc.bcm.edu 36 2 233103001 233103001 + Missense_Mutation SNP G G A novel TCGA-25-1634-01A-01W-0615-10 TCGA-25-1634-10A-01W-0616-10 G G G A G G Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID d0160665-14ea-4a35-aa77-2ed8e8ed57bd 13deb201-82f8-423c-abd4-c496b6dc342a CIZ1 25792 hgsc.bcm.edu 36 9 129982566 129982566 + Missense_Mutation SNP G G C novel TCGA-25-1634-01A-01W-0615-10 TCGA-25-1634-10A-01W-0616-10 G G G C G G Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID d0160665-14ea-4a35-aa77-2ed8e8ed57bd 13deb201-82f8-423c-abd4-c496b6dc342a DHX30 22907 hgsc.bcm.edu 36 3 47863232 47863232 + Missense_Mutation SNP G G A rs36045705 TCGA-25-1634-01A-01W-0615-10 TCGA-25-1634-10A-01W-0616-10 G G G A G G Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID d0160665-14ea-4a35-aa77-2ed8e8ed57bd 13deb201-82f8-423c-abd4-c496b6dc342a GSN 2934 hgsc.bcm.edu 36 9 123134620 123134620 + Missense_Mutation SNP T T C novel TCGA-25-1634-01A-01W-0615-10 TCGA-25-1634-10A-01W-0616-10 T T T C T T Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID d0160665-14ea-4a35-aa77-2ed8e8ed57bd 13deb201-82f8-423c-abd4-c496b6dc342a L3MBTL 26013 hgsc.bcm.edu 36 20 41602222 41602222 + Missense_Mutation SNP G G A novel TCGA-25-1634-01A-01W-0615-10 TCGA-25-1634-10A-01W-0616-10 G G G A G G Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID d0160665-14ea-4a35-aa77-2ed8e8ed57bd 13deb201-82f8-423c-abd4-c496b6dc342a MCM4 4173 hgsc.bcm.edu 36 8 49045019 49045019 + Missense_Mutation SNP G G A novel TCGA-25-1634-01A-01W-0615-10 TCGA-25-1634-10A-01W-0616-10 G G G A G G Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID d0160665-14ea-4a35-aa77-2ed8e8ed57bd 13deb201-82f8-423c-abd4-c496b6dc342a RPS6KC1 26750 hgsc.bcm.edu 36 1 211470508 211470508 + Nonsense_Mutation SNP A A T novel TCGA-25-1634-01A-01W-0615-10 TCGA-25-1634-10A-01W-0616-10 A A A T A A Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID d0160665-14ea-4a35-aa77-2ed8e8ed57bd 13deb201-82f8-423c-abd4-c496b6dc342a SCLT1 132320 hgsc.bcm.edu 36 4 130179665 130179665 + Missense_Mutation SNP C C G novel TCGA-25-1634-01A-01W-0615-10 TCGA-25-1634-10A-01W-0616-10 C C C G C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID d0160665-14ea-4a35-aa77-2ed8e8ed57bd 13deb201-82f8-423c-abd4-c496b6dc342a WDFY3 23001 hgsc.bcm.edu 36 4 85936871 85936871 + Missense_Mutation SNP T T A novel TCGA-25-1634-01A-01W-0615-10 TCGA-25-1634-10A-01W-0616-10 T T T A T T Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID d0160665-14ea-4a35-aa77-2ed8e8ed57bd 13deb201-82f8-423c-abd4-c496b6dc342a RBKS 64080 hgsc.bcm.edu 36 2 27904043 27904043 + Silent SNP C C T novel TCGA-25-1634-01A-01W-0615-10 TCGA-25-1634-10A-01W-0616-10 C C C T C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID d0160665-14ea-4a35-aa77-2ed8e8ed57bd 13deb201-82f8-423c-abd4-c496b6dc342a