Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ACY1 95 hgsc.bcm.edu 36 3 51995533 51995534 + Frame_Shift_Ins INS - - TG novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 - - . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf ANKRD24 170961 hgsc.bcm.edu 36 19 4161079 4161079 + Frame_Shift_Del DEL C C - novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf CAPN12 147968 hgsc.bcm.edu 36 19 43926452 43926452 + Missense_Mutation SNP G G A novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 G G . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf CDH24 64403 hgsc.bcm.edu 36 14 22588718 22588718 + Missense_Mutation SNP G G C novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 G G . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf CHD6 84181 hgsc.bcm.edu 36 20 39518018 39518018 + Missense_Mutation SNP T T C novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 T T . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf DYX1C1 161582 hgsc.bcm.edu 36 15 53510211 53510211 + Nonsense_Mutation SNP A A T novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 A A . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf FAM151B 167555 hgsc.bcm.edu 36 5 79851401 79851401 + Missense_Mutation SNP T T G novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 T T . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf FMNL3 91010 hgsc.bcm.edu 36 12 48333864 48333864 + Missense_Mutation SNP C C T novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf HIST1H3G 8355 hgsc.bcm.edu 36 6 26379302 26379302 + Missense_Mutation SNP C C A novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf LIN9 286826 hgsc.bcm.edu 36 1 224563500 224563501 + In_Frame_Ins INS - - TGC novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 - - . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf MKX 283078 hgsc.bcm.edu 36 10 28004277 28004277 + Missense_Mutation SNP T T C novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 T T . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf MOGAT1 116255 hgsc.bcm.edu 36 2 223261438 223261439 + Frame_Shift_Del DEL AA AA - novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 AA AA . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf MUC6 4588 hgsc.bcm.edu 36 11 1006041 1006042 + Frame_Shift_Ins INS - - C novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 - - . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf ODZ2 57451 hgsc.bcm.edu 36 5 167622010 167622010 + Frame_Shift_Del DEL A A - novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 A A . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf OR8B4 283162 hgsc.bcm.edu 36 11 123799338 123799338 + Missense_Mutation SNP C C A novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf PGAP1 80055 hgsc.bcm.edu 36 2 197445444 197445444 + Missense_Mutation SNP A A C novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 A A . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf PTPRC 5788 hgsc.bcm.edu 36 1 196952466 196952470 + Frame_Shift_Del DEL ATCAA ATCAA - novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 ATCAA ATCAA . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf SCG5 6447 hgsc.bcm.edu 36 15 30776074 30776074 + Missense_Mutation SNP T T C novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 T T . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf STAG3 10734 hgsc.bcm.edu 36 7 99617665 99617665 + Silent SNP T T C novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 T T . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf TBCD 6904 hgsc.bcm.edu 36 17 78483848 78483848 + Missense_Mutation SNP C C G novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf TTK 7272 hgsc.bcm.edu 36 6 80808616 80808616 + Frame_Shift_Del DEL A A - novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 A A . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf VWF 7450 hgsc.bcm.edu 36 12 5947587 5947587 + Missense_Mutation SNP C C T novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf WNT16 51384 hgsc.bcm.edu 36 7 120759114 120759115 + Frame_Shift_Ins INS - - G novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 - - . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf ZFP106 64397 hgsc.bcm.edu 36 15 40521625 40521625 + Missense_Mutation SNP T T C novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 T T . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf ZNF571 51276 hgsc.bcm.edu 36 19 42747734 42747734 + Missense_Mutation SNP C C T novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf AMBRA1 55626 hgsc.bcm.edu 36 11 46396117 46396117 + Missense_Mutation SNP G G C novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 G G G C G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf C2CD3 26005 hgsc.bcm.edu 36 11 73467044 73467044 + Missense_Mutation SNP T T G novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 T T T G T T Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf CHRNB1 1140 hgsc.bcm.edu 36 17 7299395 7299395 + Silent SNP G G A novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 G G G A G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf DPF3 8110 hgsc.bcm.edu 36 14 72289787 72289787 + Missense_Mutation SNP C C T novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 C C C T C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf JMJD5 79831 hgsc.bcm.edu 36 16 27129006 27129006 + Missense_Mutation SNP G G T novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 G G G T G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf KRTAP27-1 643812 hgsc.bcm.edu 36 21 30631311 30631311 + Missense_Mutation SNP G G A novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 G G G A G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf MYO7B 4648 hgsc.bcm.edu 36 2 128109807 128109807 + Missense_Mutation SNP G G A novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 G G G A G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf PPP2R4 5524 hgsc.bcm.edu 36 9 130931116 130931116 + Missense_Mutation SNP C C T novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 C C C T C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf PSMC4 5704 hgsc.bcm.edu 36 19 45177589 45177589 + Silent SNP G G A novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 G G G A G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf SPATA21 374955 hgsc.bcm.edu 36 1 16608712 16608712 + Silent SNP G G A novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 G G G A G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf TAF6L 10629 hgsc.bcm.edu 36 11 62299862 62299862 + Missense_Mutation SNP G G A novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 G G G A G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf TFAP4 7023 hgsc.bcm.edu 36 16 4252653 4252653 + Missense_Mutation SNP C C T novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 C C C T C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf ZFP36L1 677 hgsc.bcm.edu 36 14 68329376 68329376 + Silent SNP G G A novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 G G G A G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf AGPS 8540 hgsc.bcm.edu 36 2 178072684 178072684 + Nonsense_Mutation SNP T T A novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 T T T A T T Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf CAMK4 814 hgsc.bcm.edu 36 5 110847810 110847810 + Missense_Mutation SNP C C T novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 C C C T C C Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf E2F7 144455 hgsc.bcm.edu 36 12 75968547 75968547 + Missense_Mutation SNP T T G novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 T T T G T T Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf PTPRD 5789 hgsc.bcm.edu 36 9 8461015 8461015 + Missense_Mutation SNP C C T novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 C C C T C C Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf TP53 7157 hgsc.bcm.edu 36 17 7518273 7518273 + Missense_Mutation SNP C C A novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 C C C A C C Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf PTPN21 11099 hgsc.bcm.edu 36 14 88005598 88005598 + Missense_Mutation SNP A A G novel TCGA-25-1317-01A-01W-0490-10 TCGA-25-1317-10A-01W-0490-10 A A A G A A Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 668a158c-5916-49b3-bcce-860d5daa5f13 33606a67-2fa0-4025-9dd0-e7ed280f08bf