Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ARHGAP17 55114 hgsc.bcm.edu 36 16 24866326 24866328 + In_Frame_Del DEL AGT AGT - novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 AGT AGT . . . . Unknown Untested Somatic Phase_III WXS none SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a CHST15 51363 hgsc.bcm.edu 36 10 125770782 125770784 + In_Frame_Del DEL TGT TGT - novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 TGT TGT . . . . Unknown Untested Somatic Phase_III WXS none SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a HTATSF1 27336 hgsc.bcm.edu 36 X 135420003 135420003 + Nonsense_Mutation SNP C C T novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 C C . . . . Unknown Untested Somatic Phase_III WXS none SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a ITIH5 80760 hgsc.bcm.edu 36 10 7658975 7658975 + Nonsense_Mutation SNP G G C novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 G G . . . . Unknown Untested Somatic Phase_III WXS none SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a NPAS4 266743 hgsc.bcm.edu 36 11 65948061 65948063 + In_Frame_Del DEL TCC TCC - novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 TCC TCC . . . . Unknown Untested Somatic Phase_III WXS none SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a OR10H1 26539 hgsc.bcm.edu 36 19 15779201 15779201 + Missense_Mutation SNP A A G rs61745520 TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 A A . . . . Unknown Untested Somatic Phase_III WXS none SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a PABPC3 5042 hgsc.bcm.edu 36 13 24569333 24569333 + Frame_Shift_Del DEL A A - novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 A A . . . . Unknown Untested Somatic Phase_III WXS none SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a RTP1 132112 hgsc.bcm.edu 36 3 188400128 188400128 + Missense_Mutation SNP T C C novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 T T . . . . Unknown Untested Somatic Phase_III WXS none SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a TP53 7157 hgsc.bcm.edu 36 17 7518915 7518915 + Missense_Mutation SNP T T C novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 T T . . . . Unknown Untested Somatic Phase_III WXS none SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a ZNF45 7596 hgsc.bcm.edu 36 19 49109815 49109815 + Missense_Mutation SNP C C A novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 C C . . . . Unknown Untested Somatic Phase_III WXS none SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a C19orf57 79173 hgsc.bcm.edu 36 19 13862101 13862101 + Missense_Mutation SNP G G T novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 G G G T G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a DUOX1 53905 hgsc.bcm.edu 36 15 43223678 43223678 + Missense_Mutation SNP C C G novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 C C C G C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a FBXO24 26261 hgsc.bcm.edu 36 7 100028389 100028389 + Silent SNP C C T novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 C C C T C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a FCRL6 343413 hgsc.bcm.edu 36 1 158045941 158045941 + Missense_Mutation SNP G G A novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 G G G A G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a GABRG1 2565 hgsc.bcm.edu 36 4 45748339 45748339 + Silent SNP C C T novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 C C T T C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a PAH 5053 hgsc.bcm.edu 36 12 101761622 101761622 + Silent SNP G G A novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 G G G A G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a SPHKAP 80309 hgsc.bcm.edu 36 2 228594672 228594672 + Silent SNP G G A novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 G G G A G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a UBR4 23352 hgsc.bcm.edu 36 1 19326770 19326770 + Silent SNP T T G novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 T T T G T T Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a XYLT1 64131 hgsc.bcm.edu 36 16 17160197 17160197 + Missense_Mutation SNP C C T novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 C C T T C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a ZNF518B 85460 hgsc.bcm.edu 36 4 10055182 10055182 + Missense_Mutation SNP C C G novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 C C C G C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a C1orf173 127254 hgsc.bcm.edu 36 1 74810975 74810975 + Missense_Mutation SNP C C A novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 C C C A C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a CUBN 8029 hgsc.bcm.edu 36 10 17032057 17032057 + Missense_Mutation SNP G G C novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 G G G C G G Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a F8 2157 hgsc.bcm.edu 36 X 153838448 153838448 + Missense_Mutation SNP G G T novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 G G G T G G Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a GUCY1A3 2982 hgsc.bcm.edu 36 4 156851177 156851177 + Missense_Mutation SNP G G A novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 G G A A G G Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a KIAA2022 340533 hgsc.bcm.edu 36 X 73879897 73879897 + Missense_Mutation SNP G G T novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 G G G T G G Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a LAMA1 284217 hgsc.bcm.edu 36 18 6989480 6989480 + Nonsense_Mutation SNP C C A novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 C C A A C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a LRP1B 53353 hgsc.bcm.edu 36 2 141494100 141494100 + Missense_Mutation SNP T T G novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 T T G G T T Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a MAP2K4 6416 hgsc.bcm.edu 36 17 11925507 11925507 + Nonsense_Mutation SNP C C T novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 C C T T C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a PPP2R1A 5518 hgsc.bcm.edu 36 19 57408146 57408146 + Missense_Mutation SNP C C T novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 C C C T C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a RGS7 6000 hgsc.bcm.edu 36 1 239328667 239328667 + Missense_Mutation SNP G G A novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 G G G A G G Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a USH2A 7399 hgsc.bcm.edu 36 1 213968096 213968096 + Missense_Mutation SNP C C T novel TCGA-24-1548-01A-01W-0615-10 TCGA-24-1548-10A-01W-0615-10 C C C T C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 7de0028c-f2a6-460c-8da5-08e2b99c6b42 b6aa96a1-b0cf-4342-b876-b07fddf0db8a