Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name start stop reference variant type gene_name transcript_name transcript_species transcript_source transcript_version strand transcript_status trv_type c_position amino_acid_change ucsc_cons domain all_domains deletion_substructures transcript_error DLGAP2 9228 genome.wustl.edu 36 8 1636931 1636931 + Silent SNP C C T novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 8 1636931 1636931 C T SNP DLGAP2 NM_004745 human genbank 54_36p +1 reviewed silent c.2880 p.R960 0.499 HMMPfam_GKAP HMMPfam_GKAP - no_errors ZNF594 84622 genome.wustl.edu 36 17 5026919 5026919 + Missense_Mutation SNP C C T novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 17 5026919 5026919 C T SNP ZNF594 NM_032530 human genbank 54_36p -1 validated missense c.1357 p.V453I 0.052 superfamily_SSF57667,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2 HMMSmart_ZnF_C2H2,superfamily_SSF57667,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1 - no_errors DNM2 1785 genome.wustl.edu 36 19 10796805 10796805 + Missense_Mutation SNP A A G novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 A A Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 19 10796805 10796805 A G SNP DNM2 NM_001005360 human genbank 54_36p +1 reviewed missense c.1966 p.I656V 1.000 HMMPfam_GED,HMMSmart_SM00302 HMMSmart_SM00053,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Dynamin_N,PatternScan_DYNAMIN,HMMPfam_Dynamin_M,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_GED,HMMSmart_SM00302 - no_errors PDIA6 10130 genome.wustl.edu 36 2 10842549 10842549 + Missense_Mutation SNP T T C novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 2 10842549 10842549 T C SNP PDIA6 NM_005742 human genbank 54_36p -1 validated missense c.1216 p.I406V 0.907 NULL superfamily_Thioredoxin-like,HMMPfam_Thioredoxin,PatternScan_THIOREDOXIN_1 - no_errors MAK 4117 genome.wustl.edu 36 6 10872798 10872798 + Missense_Mutation SNP C C T novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 6 10872798 10872798 C T SNP MAK NM_005906 human genbank 54_36p -1 reviewed missense c.1745 p.R582Q 0.999 NULL superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST - no_errors GRIN2B 2904 genome.wustl.edu 36 12 13659724 13659724 + Silent SNP G G T novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 12 13659724 13659724 G T SNP GRIN2B NM_000834 human genbank 54_36p -1 reviewed silent c.1470 p.I490 1.000 superfamily_SSF53850,HMMSmart_PBPe,HMMPfam_Lig_chan-Glu_bd superfamily_SSF53822,superfamily_SSF53850,HMMSmart_PBPe,HMMPfam_Lig_chan-Glu_bd,HMMPfam_Lig_chan,HMMPfam_NMDAR2_C - no_errors PADI2 11240 genome.wustl.edu 36 1 17282826 17282826 + Silent SNP T T A novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 1 17282826 17282826 T A SNP PADI2 NM_007365 human genbank 54_36p -1 reviewed silent c.1032 p.R344 0.968 HMMPfam_PAD,superfamily_SSF55909 HMMPfam_PAD_N,superfamily_Cupredoxin,HMMPfam_PAD_M,superfamily_PAD_central,HMMPfam_PAD,superfamily_SSF55909 - no_errors SHMT1 6470 genome.wustl.edu 36 17 18174603 18174603 + Missense_Mutation SNP T T A novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 17 18174603 18174603 T A SNP SHMT1 NM_004169 human genbank 54_36p -1 reviewed missense c.1162 p.T388S 1.000 superfamily_PLP-dependent transferases,HMMPfam_SHMT superfamily_PLP-dependent transferases,HMMPfam_SHMT,PatternScan_SHMT - no_errors C14orf94 54930 genome.wustl.edu 36 14 22490694 22490694 + Missense_Mutation SNP C C T novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 14 22490694 22490694 C T SNP C14orf94 NM_017815 human genbank 54_36p -1 predicted missense c.375 p.M125I 0.001 NULL NULL - no_errors MTMR6 9107 genome.wustl.edu 36 13 24721461 24721461 + Missense_Mutation SNP T T A novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 13 24721461 24721461 T A SNP MTMR6 NM_004685 human genbank 54_36p -1 validated missense c.1775 p.D592V 1.000 NULL superfamily_PH domain-like,superfamily_(Phosphotyrosine protein) phosphatases II,HMMPfam_Myotub-related,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1 - no_errors MTMR6 9107 genome.wustl.edu 36 13 24721558 24721558 + Nonsense_Mutation SNP C C A novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 13 24721558 24721558 C A SNP MTMR6 NM_004685 human genbank 54_36p -1 validated nonsense c.1678 p.E560* 0.273 NULL HMMSmart_SM00404,HMMPfam_Myotub-related,PatternScan_TYR_PHOSPHATASE_1,superfamily_PH domain-like,superfamily_(Phosphotyrosine protein) phosphatases II - no_errors RARB 5915 genome.wustl.edu 36 3 25597188 25597188 + Silent SNP C C T novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 3 25597188 25597188 C T SNP RARB NM_000965 human genbank 54_36p +1 reviewed silent c.757 p.L253 1.000 superfamily_Str_ncl_receptor,HMMSmart_HOLI,HMMPfam_Hormone_recep superfamily_SSF57716,HMMSmart_ZnF_C4,HMMPfam_zf-C4,PatternScan_NUCLEAR_REC_DBD_1,superfamily_Str_ncl_receptor,HMMSmart_HOLI,HMMPfam_Hormone_recep - no_errors LOC729862 729862 genome.wustl.edu 36 5 28963133 28963133 + RNA SNP C C G novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 5 28963133 28963133 C G SNP LOC729862 XR_040872 human genbank 54_36p +1 model rna NULL NULL 0.948 - - - no_errors LOC92755 92755 genome.wustl.edu 36 8 30329300 30329300 + RNA SNP G G A novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 8 30329300 30329300 G A SNP LOC92755 XR_016140 human genbank 54_36p +1 model rna NULL NULL 1.000 - - - pseudogene TEX15 56154 genome.wustl.edu 36 8 30821551 30821551 + Missense_Mutation SNP T T G novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 8 30821551 30821551 T G SNP TEX15 NM_031271 human genbank 54_36p -1 validated missense c.4525 p.T1509P 0.021 NULL NULL - no_errors C6orf25 80739 genome.wustl.edu 36 6 31799692 31799692 + Missense_Mutation SNP T T C novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 6 31799692 31799692 T C SNP C6orf25 NM_138272 human genbank 54_36p +1 reviewed missense c.359 p.L120P 0.987 NULL NULL - no_errors ADAM2 2515 genome.wustl.edu 36 8 39726035 39726035 + Missense_Mutation SNP A A G novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 A A Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 8 39726035 39726035 A G SNP ADAM2 NM_001464 human genbank 54_36p -1 reviewed missense c.1967 p.I656T 0.978 NULL "HMMPfam_Pep_M12B_propep,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin,HMMPfam_Disintegrin,HMMSmart_SM00050,superfamily_Blood coagulation inhibitor (disintegrin),PatternScan_DISINTEGRIN_1,HMMSmart_SM00608,HMMPfam_ADAM_CR,HMMPfam_EGF_2" - no_errors USP9X 8239 genome.wustl.edu 36 X 40873286 40873286 + Missense_Mutation SNP T T A novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b X 40873286 40873286 T A SNP USP9X NM_001039590 human genbank 54_36p +1 reviewed missense c.186 p.D62E 1.000 NULL superfamily_Cysteine proteinases,HMMPfam_UCH,PatternScan_UCH_2_1,PatternScan_UCH_2_2 - no_errors ENSG00000187451 0 genome.wustl.edu 36 17 42482485 42482485 + Silent SNP C C T novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 17 42482485 42482485 C T SNP ENSG00000187451 ENST00000309965 human ensembl 54_36p +1 known silent c.153 p.D51 0.000 NULL NULL - no_errors ZDHHC3 51304 genome.wustl.edu 36 3 44943341 44943341 + Silent SNP T T A novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 3 44943341 44943341 T A SNP ZDHHC3 NM_016598 human genbank 54_36p -1 validated silent c.828 p.G276 1.000 NULL HMMPfam_zf-DHHC - no_errors PHF21A 51317 genome.wustl.edu 36 11 45943589 45943589 + Missense_Mutation SNP G G C novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 11 45943589 45943589 G C SNP PHF21A NM_001101802 human genbank 54_36p -1 validated missense c.846 p.H282Q 1.000 NULL HMMPfam_AT_hook,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1 - no_errors PPYR1 5540 genome.wustl.edu 36 10 46507581 46507581 + Silent SNP T T C novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 10 46507581 46507581 T C SNP PPYR1 NM_005972 human genbank 54_36p +1 validated silent c.792 p.N264 0.017 superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1 superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1 - no_errors DMXL2 23312 genome.wustl.edu 36 15 49560740 49560740 + Nonsense_Mutation SNP C C T novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 15 49560740 49560740 C T SNP DMXL2 NM_015263 human genbank 54_36p -1 validated nonsense c.5855 p.W1952* 1.000 NULL superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40 - no_errors PPP1R13L 10848 genome.wustl.edu 36 19 50591481 50591481 + Missense_Mutation SNP C C A novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 19 50591481 50591481 C A SNP PPP1R13L NM_006663 human genbank 54_36p -1 validated missense c.766 p.D256Y 1.000 NULL superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326 - no_errors ITGB7 3695 genome.wustl.edu 36 12 51873400 51873400 + Missense_Mutation SNP C C T novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 12 51873400 51873400 C T SNP ITGB7 NM_000889 human genbank 54_36p -1 provisional missense c.1517 p.R506H 0.083 superfamily_EGF/Laminin,PatternScan_EGF_1 HMMSmart_SM00423,HMMPfam_Integrin_beta,HMMSmart_SM00187,superfamily_vWA-like,superfamily_Integrin domains,superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_INTEGRIN_BETA,HMMPfam_EGF_2,PatternScan_EGF_2,PatternScan_4FE4S_FER_1,superfamily_Integrin beta tail domain,HMMPfam_Integrin_B_tail,HMMPfam_Integrin_b_cyt - no_errors FGF21 26291 genome.wustl.edu 36 19 53951506 53951506 + Silent SNP G G A novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 19 53951506 53951506 G A SNP FGF21 NM_019113 human genbank 54_36p +1 reviewed silent c.201 p.G67 0.927 HMMSmart_FGF,superfamily_Cytok_IL1_like,HMMPfam_FGF HMMSmart_FGF,superfamily_Cytok_IL1_like,HMMPfam_FGF,PatternScan_HBGF_FGF - no_errors KDR 3791 genome.wustl.edu 36 4 55666813 55666813 + Missense_Mutation SNP A A T novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 A A Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 4 55666813 55666813 A T SNP KDR NM_002253 human genbank 54_36p -1 validated missense c.1588 p.C530S 1.000 superfamily_SSF48726,HMMSmart_IG superfamily_SSF48726,HMMSmart_IG,HMMPfam_V-set,HMMPfam_I-set,HMMSmart_IGc2,HMMPfam_ig,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_ATP,PatternScan_RECEPTOR_TYR_KIN_III,PatternScan_PROTEIN_KINASE_TYR - no_errors LEPR 3953 genome.wustl.edu 36 1 65840217 65840217 + Missense_Mutation SNP A A T novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 A A Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 1 65840217 65840217 A T SNP LEPR NM_002303 human genbank 54_36p +1 validated missense c.1389 p.Q463H 1.000 superfamily_Fibronectin type III superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_HEMATOPO_REC_S_F1,HMMPfam_Lep_receptor_Ig,PatternScan_HEMATOPO_REC_L_F2 - no_errors ANKRD20A4 728747 genome.wustl.edu 36 9 68711803 68711803 + Missense_Mutation SNP G G C novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 9 68711803 68711803 G C SNP ANKRD20A4 NM_001098805 human genbank 54_36p +1 inferred missense c.1447 p.V483L 0.000 NULL superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank - no_errors GDPD2 54857 genome.wustl.edu 36 X 69563735 69563735 + Missense_Mutation SNP G G T novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b X 69563735 69563735 G T SNP GDPD2 NM_017711 human genbank 54_36p +1 provisional missense c.726 p.M242I 1.000 superfamily_PLC-like_Pdiesterase_TIM-brl,HMMPfam_GDPD superfamily_PLC-like_Pdiesterase_TIM-brl,HMMPfam_GDPD - no_errors MXD1 4084 genome.wustl.edu 36 2 69996008 69996008 + Silent SNP G G A novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 2 69996008 69996008 G A SNP MXD1 NM_002357 human genbank 54_36p +1 reviewed silent c.42 p.E14 1.000 NULL HMMPfam_HLH,superfamily_HLH_basic,HMMSmart_HLH - no_errors CXCR3 2833 genome.wustl.edu 36 X 70753684 70753684 + Silent SNP A A T novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 A A Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b X 70753684 70753684 A T SNP CXCR3 NM_001504 human genbank 54_36p -1 reviewed silent c.363 p.S121 0.148 superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1 superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1 - no_errors RASGRF1 5923 genome.wustl.edu 36 15 77041567 77041567 + Nonsense_Mutation SNP G G A novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 15 77041567 77041567 G A SNP RASGRF1 NM_002891 human genbank 54_36p -1 reviewed nonsense c.3796 p.R1266* 0.994 superfamily_Ras GEF,HMMSmart_SM00147 superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_IQ,superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,PatternScan_DH_1,superfamily_Ras GEF,HMMSmart_SM00229,HMMPfam_RasGEF_N,HMMSmart_SM00147,HMMPfam_RasGEF,PatternScan_RASGEF - no_errors ADAMTSL3 57188 genome.wustl.edu 36 15 82330703 82330703 + Silent SNP T T C novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 15 82330703 82330703 T C SNP ADAMTSL3 NM_207517 human genbank 54_36p +1 validated silent c.948 p.D316 0.998 NULL superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_I-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,HMMPfam_PLAC - no_errors ABHD2 11057 genome.wustl.edu 36 15 87495987 87495987 + Silent SNP G G A novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 15 87495987 87495987 G A SNP ABHD2 NM_007011 human genbank 54_36p +1 reviewed silent c.270 p.R90 0.999 NULL superfamily_SSF53474,HMMPfam_Abhydrolase_1,PatternScan_UPF0017 - no_errors CHD2 1106 genome.wustl.edu 36 15 91268713 91268713 + Missense_Mutation SNP A A G novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 A A Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 15 91268713 91268713 A G SNP CHD2 NM_001271 human genbank 54_36p +1 reviewed missense c.221 p.K74R 1.000 NULL HMMSmart_SM00298,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Chromo,PatternScan_CHROMO_1,superfamily_Chromo domain-like,HMMSmart_SM00487,HMMPfam_SNF2_N,HMMSmart_SM00490,HMMPfam_Helicase_C,superfamily_Homeodomain-like - no_errors SMURF1 57154 genome.wustl.edu 36 7 98481312 98481312 + Missense_Mutation SNP G G A novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 7 98481312 98481312 G A SNP SMURF1 NM_020429 human genbank 54_36p -1 reviewed missense c.1279 p.R427W 0.955 superfamily_Hect E3 ligase catalytic domain,HMMSmart_SM00119 superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2,superfamily_WW domain,HMMSmart_SM00456,HMMPfam_WW,PatternScan_WW_DOMAIN_1,superfamily_Hect E3 ligase catalytic domain,HMMSmart_SM00119,HMMPfam_HECT - no_errors RGAG1 57529 genome.wustl.edu 36 X 109583519 109583519 + Silent SNP A A C novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 A A Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b X 109583519 109583519 A C SNP RGAG1 NM_020769 human genbank 54_36p +1 provisional silent c.3018 p.T1006 0.000 NULL HMMPfam_Retrotrans_gag - no_errors AMOT 154796 genome.wustl.edu 36 X 111909049 111909049 + Missense_Mutation SNP C C A novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b X 111909049 111909049 C A SNP AMOT NM_133265 human genbank 54_36p -1 reviewed missense c.1762 p.A588S 0.997 NULL NULL - no_errors ITGB5 3693 genome.wustl.edu 36 3 126010597 126010597 + Missense_Mutation SNP C C A novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 3 126010597 126010597 C A SNP ITGB5 NM_002213 human genbank 54_36p -1 provisional missense c.1225 p.G409C 1.000 HMMPfam_Integrin_beta,HMMSmart_INB,superfamily_SSF69179 HMMSmart_PSI,HMMPfam_Integrin_beta,HMMSmart_INB,superfamily_SSF53300,HMMSmart_VWA,superfamily_SSF69179,HMMPfam_EGF_2,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_INTEGRIN_BETA,superfamily_SSF57196,HMMSmart_EGF,superfamily_Integrin_bsu_tail,HMMPfam_Integrin_B_tail,HMMPfam_Integrin_b_cyt - no_errors LRRC8A 56262 genome.wustl.edu 36 9 130710842 130710842 + Missense_Mutation SNP C C G novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 9 130710842 130710842 C G SNP LRRC8A NM_019594 human genbank 54_36p +1 reviewed missense c.1578 p.N526K 1.000 superfamily_L domain-like superfamily_L domain-like,HMMSmart_SM00369,HMMSmart_SM00365,HMMPfam_LRR_1 - no_errors MRPL3 11222 genome.wustl.edu 36 3 132664369 132664369 + Missense_Mutation SNP T T C novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 3 132664369 132664369 T C SNP MRPL3 NM_007208 human genbank 54_36p -1 reviewed missense c.935 p.K312R 0.401 superfamily_Translation proteins superfamily_Translation proteins,HMMPfam_Ribosomal_L3,PatternScan_RIBOSOMAL_L3 - no_errors ZNF806 646915 genome.wustl.edu 36 2 132791570 132791570 + Silent SNP C C A novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 2 132791570 132791570 C A SNP ZNF806 XM_001724242 human genbank 54_36p +1 model silent c.561 p.T187 0.020 NULL superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2 - no_errors COL5A1 1289 genome.wustl.edu 36 9 136722745 136722745 + Silent SNP T T G novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 9 136722745 136722745 T G SNP COL5A1 NM_000093 human genbank 54_36p +1 reviewed silent c.276 p.P92 1.000 HMMSmart_TSPN,superfamily_ConA_like_lec_gl HMMSmart_TSPN,superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_2,HMMPfam_Collagen,HMMSmart_COLFI,HMMPfam_COLFI - no_errors MCF2 4168 genome.wustl.edu 36 X 138497570 138497570 + Missense_Mutation SNP C C A novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b X 138497570 138497570 C A SNP MCF2 NM_001099855 human genbank 54_36p -1 validated missense c.2673 p.K891N 0.012 NULL HMMSmart_SEC14,superfamily_Spectrin,HMMSmart_SPEC,superfamily_DH-domain,HMMPfam_RhoGEF,HMMSmart_RhoGEF,PatternScan_DH_1,superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH - no_errors PCDHA2 56146 genome.wustl.edu 36 5 140155559 140155559 + Missense_Mutation SNP G G A novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 5 140155559 140155559 G A SNP PCDHA2 NM_018905 human genbank 54_36p +1 reviewed missense c.826 p.E276K 0.098 superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112 superfamily_Cadherin-like,HMMSmart_SM00112,HMMPfam_Cadherin_2,PatternScan_CADHERIN_1,HMMPfam_Cadherin - no_errors PCDHAC1 56135 genome.wustl.edu 36 5 140286940 140286940 + Silent SNP C C T novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 5 140286940 140286940 C T SNP PCDHAC1 NM_018898 human genbank 54_36p +1 reviewed silent c.279 p.C93 0.033 superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112 superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin - no_errors PCDHB9 56127 genome.wustl.edu 36 5 140548644 140548644 + Missense_Mutation SNP C C T novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 5 140548644 140548644 C T SNP PCDHB9 NM_019119 human genbank 54_36p +1 reviewed missense c.1568 p.P523L 0.001 NULL HMMPfam_Cadherin_2,superfamily_Cadherin-like,PatternScan_CADHERIN_1,HMMPfam_Cadherin,HMMSmart_SM00112 - pseudogene:no_stop_codon:bad_bp_length_for_coding_region KEL 3792 genome.wustl.edu 36 7 142350787 142350787 + Missense_Mutation SNP C C A novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 7 142350787 142350787 C A SNP KEL NM_000420 human genbank 54_36p -1 reviewed missense c.1611 p.W537C 0.760 "superfamily_Metalloproteases (""zincins"") catalytic domain" "superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Peptidase_M13_N,HMMPfam_Peptidase_M13" - no_errors PDE4DIP 9659 genome.wustl.edu 36 1 143642285 143642285 + Missense_Mutation SNP T T A novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 1 143642285 143642285 T A SNP PDE4DIP NM_001002811 human genbank 54_36p -1 validated missense c.781 p.T261S 0.000 NULL superfamily_SSF57716 - no_errors CYP11B2 1585 genome.wustl.edu 36 8 143991752 143991752 + Missense_Mutation SNP C C G novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 8 143991752 143991752 C G SNP CYP11B2 NM_000498 human genbank 54_36p -1 reviewed missense c.1072 p.A358P 0.004 HMMPfam_p450,superfamily_Cytochrome P450 HMMPfam_p450,superfamily_Cytochrome P450,PatternScan_CYTOCHROME_P450 - no_errors PI4KB 5298 genome.wustl.edu 36 1 149555219 149555219 + Missense_Mutation SNP C C G novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 1 149555219 149555219 C G SNP PI4KB NM_002651 human genbank 54_36p -1 provisional missense c.399 p.Q133H 1.000 NULL superfamily_Protein kinase-like (PK-like),HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2 - no_errors F8 2157 genome.wustl.edu 36 X 153811279 153811279 + Missense_Mutation SNP G G A novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b X 153811279 153811279 G A SNP F8 NM_000132 human genbank 54_36p -1 reviewed missense c.3980 p.T1327M 0.000 NULL superfamily_Cupredoxins,HMMPfam_Cu-oxidase_3,HMMPfam_Cu-oxidase,PatternScan_MULTICOPPER_OXIDASE1,HMMPfam_Cu-oxidase_2,HMMSmart_SM00231,superfamily_Galactose-binding domain-like,HMMPfam_F5_F8_type_C,PatternScan_FA58C_1,PatternScan_FA58C_2 - no_errors PLD1 5337 genome.wustl.edu 36 3 172845438 172845438 + Silent SNP G G T novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 3 172845438 172845438 G T SNP PLD1 NM_002662 human genbank 54_36p -1 validated silent c.2499 p.T833 0.327 superfamily_Phospholipase D/nuclease HMMPfam_PX,HMMSmart_SM00312,superfamily_PX domain,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_Phospholipase D/nuclease,HMMPfam_PLDc,HMMSmart_SM00155 - no_errors POLR2H 5437 genome.wustl.edu 36 3 185564044 185564044 + Nonsense_Mutation SNP C C T novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 3 185564044 185564044 C T SNP POLR2H NM_006232 human genbank 54_36p +1 reviewed nonsense c.70 p.R24* 1.000 superfamily_Nucleic acid-binding proteins,HMMSmart_SM00658,HMMPfam_RNA_pol_Rpb8 superfamily_Nucleic acid-binding proteins,HMMSmart_SM00658,HMMPfam_RNA_pol_Rpb8 - no_errors C1orf116 79098 genome.wustl.edu 36 1 205264887 205264887 + Missense_Mutation SNP C C T novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 1 205264887 205264887 C T SNP C1orf116 NM_023938 human genbank 54_36p -1 validated missense c.251 p.R84Q 0.000 NULL NULL - no_errors DLGAP2 9228 genome.wustl.edu 36 8 1636857 1636868 + In_Frame_Del DEL CGCCAGGAAGCC CGCCAGGAAGCC - novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 CGCCAGGAAGCC CGCCAGGAAGCC Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 8 1636857 1636868 CGCCAGGAAGCC - DEL DLGAP2 NM_004745 human genbank 54_36p +1 reviewed in_frame_del c.2806_2817 p.QEAR937in_frame_del 0.999:0.997:0.207:0.984:0.998:1.000:1.000:1.000:0.998:1.000:1.000:0.834 HMMPfam_GKAP HMMPfam_GKAP - no_errors TP53 7157 genome.wustl.edu 36 17 7519187 7519192 + In_Frame_Del DEL GCGGGT GCGGGT - novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 GCGGGT GCGGGT Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 17 7519187 7519192 GCGGGT - DEL TP53 NM_000546 human genbank 54_36p -1 reviewed in_frame_del c.468_463 p.TR155in_frame_del 0.002:0.005:0.005:0.007:0.002:0.000 HMMPfam_P53,superfamily_p53-like transcription factors HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain - no_errors MPHOSPH8 54737 genome.wustl.edu 36 13 19119098 19119098 + Frame_Shift_Del DEL T T - novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 13 19119098 19119098 T - DEL MPHOSPH8 NM_017520 human genbank 54_36p +1 provisional frame_shift_del c.885 p.S295fs 0.001 NULL superfamily_Chromo domain-like,HMMSmart_SM00298,HMMPfam_Chromo,PatternScan_CHROMO_1,superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank - no_errors TMEM196 256130 genome.wustl.edu 36 7 19731911 19731937 + Splice_Site DEL GATCATCTGATAAGAAAAAGAAAGGCA GATCATCTGATAAGAAAAAGAAAGGCA - novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 GATCATCTGATAAGAAAAAGAAAGGCA GATCATCTGATAAGAAAAAGAAAGGCA Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 7 19731911 19731937 GATCATCTGATAAGAAAAAGAAAGGCA - DEL TMEM196 NM_152774 human genbank 54_36p -1 validated splice_site_del c.1-21_47 e1-1 0.998:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.983:0.003:0.001:0.000:0.001:0.001:0.016:0.047:0.005:0.031:0.035:0.014:0.005:0.006:0.009:0.001:0.000:0.000:0.000 - - - no_errors ZFYVE19 84936 genome.wustl.edu 36 15 38887191 38887192 + Frame_Shift_Ins INS - - GGGGC novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 - - Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 15 38887191 38887192 - GGGGC INS ZFYVE19 NM_001077268 human genbank 54_36p +1 validated frame_shift_ins c.112_113 p.A42fs 0.027:0.013 NULL HMMSmart_SM00064,superfamily_FYVE/PHD zinc finger,HMMPfam_FYVE,PatternScan_2FE2S_FER_1 - no_errors CDC20 991 genome.wustl.edu 36 1 43597998 43598020 + Frame_Shift_Del DEL TGGGCTTTGAACCTGAACGGTTT TGGGCTTTGAACCTGAACGGTTT - novel unknown TCGA-13-2071-01A-02D-1526-09 TCGA-13-2071-10A-01D-1526-09 TGGGCTTTGAACCTGAACGGTTT TGGGCTTTGAACCTGAACGGTTT Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 0a32c719-3328-477f-bb95-961de294e4c4 6a0e1ff5-9461-49c7-90a4-6e4ce55f189b 1 43597998 43598020 TGGGCTTTGAACCTGAACGGTTT - DEL CDC20 NM_001255 human genbank 54_36p +1 reviewed frame_shift_del c.346_368 p.W116fs 1.000:1.000:1.000:1.000:0.997:0.593:0.587:0.867:0.895:0.903:0.901:0.888:0.994:1.000:0.997:1.000:1.000:1.000:1.000:1.000:0.998:1.000:1.000 superfamily_WD40_like superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40,PatternScan_WD_REPEATS_1 - no_errors