Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
SV2A	9900	genome.wustl.edu	36	1	148151531	148151531	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	1	148151531	148151531	G	A	SNP	SV2A	NM_014849	human	genbank	54_36p	-1	validated	silent	c.486	p.G162	1	NULL	-	-	no_errors
FLG	2312	genome.wustl.edu	36	1	150544733	150544733	+	Missense_Mutation	SNP	C	C	G		Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	1	150544733	150544733	C	G	SNP	FLG	NM_002016	human	genbank	54_36p	-1	provisional	missense	c.9253	p.G3085R	0	NULL	-	-	no_errors
CACNA1E	777	genome.wustl.edu	36	1	179974914	179974914	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	1	179974914	179974914	C	T	SNP	CACNA1E	NM_000721	human	genbank	54_36p	1	reviewed	silent	c.3621	p.D1207	1	HMMPfam_Ion_trans	HMMPfam_Ion_trans;HMMPfam_Ca_chan_IQ;superfamily_EF-hand;superfamily_Voltage-gated potassium channels	-	no_errors
KCNT2	343450	genome.wustl.edu	36	1	194665328	194665328	+	Splice_Site	SNP	A	A	T	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	1	194665328	194665328	A	T	SNP	KCNT2	NM_198503	human	genbank	54_36p	-1	validated	splice_site	c.819+2	e9+2	1	-	-	-	no_errors
PKD2L1	9033	genome.wustl.edu	36	10	102049456	102049456	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	10	102049456	102049456	C	A	SNP	PKD2L1	NM_016112	human	genbank	54_36p	-1	reviewed	missense	c.359	p.G120V	1	NULL	HMMPfam_PKD_channel;superfamily_EF-hand;superfamily_Voltage-gated potassium channels	-	no_errors
MPP7	143098	genome.wustl.edu	36	10	28448650	28448650	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	10	28448650	28448650	C	G	SNP	MPP7	NM_173496	human	genbank	54_36p	-1	validated	missense	c.888	p.R296S	1	HMMPfam_SH3_2	superfamily_SH3-domain;HMMPfam_PDZ;superfamily_PDZ domain-like;HMMPfam_Guanylate_kin;HMMPfam_SH3_2;HMMPfam_L27;superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
CCAR1	55749	genome.wustl.edu	36	10	70166669	70166669	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	10	70166669	70166669	T	C	SNP	CCAR1	NM_018237	human	genbank	54_36p	1	validated	missense	c.104	p.L35P	1	NULL	HMMPfam_SAP;superfamily_EF-hand;superfamily_Nucleic acid-binding proteins;superfamily_SAP domain	-	no_errors
C10orf35	219738	genome.wustl.edu	36	10	71062718	71062718	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	10	71062718	71062718	C	A	SNP	C10orf35	NM_145306	human	genbank	54_36p	1	validated	missense	c.263	p.P88Q	1	NULL	-	-	no_errors
DDX25	29118	genome.wustl.edu	36	11	125292231	125292231	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	11	125292231	125292231	G	C	SNP	DDX25	NM_013264	human	genbank	54_36p	1	reviewed	missense	c.571	p.E191Q	1	NULL	-	-	no_errors
SYT12	91683	genome.wustl.edu	36	11	66567861	66567861	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	11	66567861	66567861	G	T	SNP	SYT12	NM_177963	human	genbank	54_36p	1	provisional	missense	c.798	p.Q266H	1	NULL	HMMPfam_C2;superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	-	no_errors
NUMA1	4926	genome.wustl.edu	36	11	71404009	71404023	+	In_Frame_Del	DEL	CCAGGGCATCTGCAG	CCAGGGCATCTGCAG	-	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	CCAGGGCATCTGCAG	CCAGGGCATCTGCAG	CCAGGGCATCTGCAG	-	CCAGGGCATCTGCAG	CCAGGGCATCTGCAG	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	11	71404009	71404023	CCAGGGCATCTGCAG	-	DEL	NUMA1	NM_006185	human	genbank	54_36p	-1	validated	in_frame_del	c.2188_2174	p.AADAL725in_frame_del	0.016:0.017:0.018:0.006:0.002:0.000:0.000:0.000:0.002:0.005:0.001:0.007:0.006:0.000:0.079	NULL	superfamily_Prefoldin;superfamily_Penicillin-binding protein 2x (pbp-2x) c-terminal domain	(deletion:cds_exon[71401589;71404954])	no_errors
CHD4	1108	genome.wustl.edu	36	12	6571444	6571444	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	12	6571444	6571444	G	A	SNP	CHD4	NM_001273	human	genbank	54_36p	-1	reviewed	missense	c.2989	p.L997F	1	HMMPfam_SNF2_N	HMMPfam_SNF2_N;HMMPfam_Chromo;HMMPfam_Helicase_C;HMMPfam_PHD;superfamily_Homeodomain-like;superfamily_HMG-box;HMMPfam_DUF1086;HMMPfam_DUF1087;superfamily_FYVE/PHD zinc finger;HMMPfam_CHDCT2;HMMPfam_CHDNT;superfamily_P-loop containing nucleoside triphosphate hydrolases;superfamily_Chromo domain-like	-	no_errors
C9orf171	389799	genome.wustl.edu	36	9	134364726	134364726	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	9	134364726	134364726	C	T	SNP	C9orf171	NM_207417	human	genbank	54_36p	1	predicted	missense	c.550	p.R184C	0.98	NULL	-	-	no_errors
KCNH5	27133	genome.wustl.edu	36	14	62486626	62486626	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	14	62486626	62486626	C	T	SNP	KCNH5	NM_139318	human	genbank	54_36p	-1	reviewed	silent	c.1347	p.S449	0.56	HMMPfam_Ion_trans	HMMPfam_cNMP_binding;superfamily_cAMP-binding domain-like;HMMPfam_Ion_trans;HMMPfam_PAS;superfamily_PYP-like sensor domain (PAS domain);superfamily_Voltage-gated potassium channels	-	no_errors
CILP	8483	genome.wustl.edu	36	15	63277777	63277777	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	15	63277777	63277777	T	A	SNP	CILP	NM_003613	human	genbank	54_36p	-1	reviewed	missense	c.1900	p.T634S	1	NULL	HMMPfam_TSP_1;superfamily_Carboxypeptidase regulatory domain;HMMPfam_ig;superfamily_Immunoglobulin;superfamily_TSP-1 type 1 repeat	-	no_errors
MBTPS1	8720	genome.wustl.edu	36	16	82672933	82672933	+	Silent	SNP	G	G	C	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	16	82672933	82672933	G	C	SNP	MBTPS1	NM_003791	human	genbank	54_36p	-1	reviewed	silent	c.1368	p.V456	1	HMMPfam_Peptidase_S8	HMMPfam_Peptidase_S8;superfamily_Subtilisin-like	-	no_errors
TP53	7157	genome.wustl.edu	36	17	7518295	7518295	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	17	7518295	7518295	C	A	SNP	TP53	NM_000546	human	genbank	54_36p	-1	reviewed	missense	c.711	p.M237I	1	HMMPfam_P53	superfamily_p53-like transcription factors;superfamily_p53 tetramerization domain;P53_tetramer;HMMPfam_P53_tetramer;P53;HMMPfam_P53;P53_TAD;HMMPfam_P53_TAD	-	no_errors
BRD4	23476	genome.wustl.edu	36	19	15237429	15237429	+	Silent	SNP	C	C	G	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	19	15237429	15237429	C	G	SNP	BRD4	NM_058243	human	genbank	54_36p	-1	reviewed	silent	c.585	p.T195	1	NULL	HMMPfam_Bromodomain;superfamily_Bromodomain	-	no_errors
PLEKHB2	55041	genome.wustl.edu	36	2	131620728	131620728	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	2	131620728	131620728	A	T	SNP	PLEKHB2	NM_001100623	human	genbank	54_36p	1	validated	missense	c.581	p.Y194F	0.97	NULL	-	-	no_errors
SCN9A	6335	genome.wustl.edu	36	2	166837176	166837176	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	2	166837176	166837176	C	T	SNP	SCN9A	NM_002977	human	genbank	54_36p	-1	validated	silent	c.3297	p.S1099	0.98	HMMPfam_Na_trans_assoc	HMMPfam_IQ;HMMPfam_Ion_trans;HMMPfam_Na_trans_assoc;superfamily_EF-hand;superfamily_Voltage-gated potassium channels	-	no_errors
TTN	7273	genome.wustl.edu	36	2	179139089	179139089	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	2	179139089	179139089	C	G	SNP	TTN	NM_133378	human	genbank	54_36p	-1	reviewed	missense	c.72311	p.S24104T	1	NULL	-	-	pseudogene:no_stop_codon:bad_bp_length_for_coding_region
SNRNP200	23020	genome.wustl.edu	36	2	96332777	96332777	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	2	96332777	96332777	C	G	SNP	SNRNP200	NM_014014	human	genbank	54_36p	-1	validated	missense	c.228	p.E76D	1	NULL	-	-	no_errors
KIAA1755	85449	genome.wustl.edu	36	20	36274961	36274961	+	Missense_Mutation	SNP	C	C	G		Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	20	36274961	36274961	C	G	SNP	KIAA1755	NM_001029864	human	genbank	54_36p	-1	predicted	missense	c.3500	p.S1167T	0.001	NULL	-	-	no_errors
ZBP1	81030	genome.wustl.edu	36	20	55624752	55624752	+	Silent	SNP	A	A	C	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	20	55624752	55624752	A	C	SNP	ZBP1	NM_030776	human	genbank	54_36p	-1	provisional	silent	c.213	p.T71	0	NULL	-	-	no_errors
EIF2B5	8893	genome.wustl.edu	36	3	185343261	185343261	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	3	185343261	185343261	G	A	SNP	EIF2B5	NM_003907	human	genbank	54_36p	1	validated	missense	c.1547	p.G516E	1	NULL	HMMPfam_Hexapep;HMMPfam_W2;superfamily_Trimeric LpxA-like enzymes;superfamily_ARM repeat;superfamily_Nucleotide-diphospho-sugar transferases	-	no_errors
ACAP2	23527	genome.wustl.edu	36	3	196494311	196494311	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	3	196494311	196494311	G	A	SNP	ACAP2	NM_012287	human	genbank	54_36p	-1	validated	missense	c.1925	p.A642V	1	NULL	-	-	no_errors
OR5H6	79295	genome.wustl.edu	36	3	99466357	99466357	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	3	99466357	99466357	T	C	SNP	OR5H6	NM_001005479	human	genbank	54_36p	1	provisional	missense	c.539	p.F180S	0.02	NULL	-	-	no_errors
PDE6A	5145	genome.wustl.edu	36	5	149304423	149304423	+	Nonsense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	5	149304423	149304423	C	A	SNP	PDE6A	NM_000440	human	genbank	54_36p	-1	reviewed	nonsense	c.7	p.E3*	1	NULL	-	-	no_errors
MUC17	140453	genome.wustl.edu	36	7	100473717	100473717	+	Silent	SNP	A	A	C	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	7	100473717	100473717	A	C	SNP	MUC17	NM_001040105	human	genbank	54_36p	1	provisional	silent	c.12300	p.T4100	0.73	NULL	HMMPfam_SEA;superfamily_EGF/Laminin;superfamily_SEA domain	-	no_errors
MRRF	92399	genome.wustl.edu	36	9	124073039	124073039	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	9	124073039	124073039	C	T	SNP	MRRF	NM_138777	human	genbank	54_36p	1	validated	silent	c.48	p.R16	0.11	NULL	-	-	no_errors
NUP214	8021	genome.wustl.edu	36	9	133040820	133040820	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	9	133040820	133040820	C	G	SNP	NUP214	NM_005085	human	genbank	54_36p	1	reviewed	missense	c.3310	p.Q1104E	0.93	NULL	superfamily_WD40 repeat-like;superfamily_Positive stranded ssRNA viruses	-	no_errors
ZNF658	26149	genome.wustl.edu	36	9	40763969	40763969	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	9	40763969	40763969	C	T	SNP	ZNF658	NM_033160	human	genbank	54_36p	-1	validated	missense	c.1306	p.G436R	0.05	NULL	HMMPfam_KRAB;HMMPfam_zf-C2H2;superfamily_KRAB domain (Kruppel-associated box Pfam 01352);superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ENSG00000204562	0	genome.wustl.edu	36	9	83722917	83722917	+	Silent	SNP	A	A	C	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	9	83722917	83722917	A	C	SNP	ENSG00000204562	ENST00000376459	human	ensembl	54_36p	1	known	silent	c.790	p.R264	0	NULL	-	-	no_errors
THOC2	57187	genome.wustl.edu	36	X	122588069	122588069	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	X	122588069	122588069	G	T	SNP	THOC2	NM_001081550	human	genbank	54_36p	-1	validated	missense	c.2883	p.D961E	1	NULL	-	-	no_errors
TLR8	51311	genome.wustl.edu	36	X	12848802	12848802	+	Silent	SNP	A	A	T	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	X	12848802	12848802	A	T	SNP	TLR8	NM_138636	human	genbank	54_36p	1	reviewed	silent	c.1722	p.T574	0.81	NULL	-	-	no_errors
IGSF1	3547	genome.wustl.edu	36	X	130236275	130236275	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	X	130236275	130236275	G	C	SNP	IGSF1	NM_001555	human	genbank	54_36p	-1	validated	missense	c.3730	p.L1244V	0.99	NULL	HMMPfam_ig;superfamily_Immunoglobulin	-	no_errors
CSAG1	158511	genome.wustl.edu	36	X	151659815	151659815	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	X	151659815	151659815	G	T	SNP	CSAG1	NM_001102576	human	genbank	54_36p	1	reviewed	missense	c.188	p.R63M	0.01	NULL	-	-	no_errors
IRAK1	3654	genome.wustl.edu	36	X	152938100	152938100	+	Missense_Mutation	SNP	G	G	A		Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	X	152938100	152938100	G	A	SNP	IRAK1	NM_001569	human	genbank	54_36p	-1	reviewed	missense	c.280	p.R94C	0.96	HMMPfam_Death	HMMPfam_Pkinase,superfamily_Protein kinase-like (PK-like),superfamily_DEATH domain,Death,HMMPfam_Death,Pkinase	-	no_errors
CLIC2	1193	genome.wustl.edu	36	X	154181291	154181291	+	Splice_Site	SNP	C	C	T	novel	Unknown	TCGA-13-1412-01A-01W-0494-09	TCGA-13-1412-10A-01W-0495-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	f7edafe2-3eab-4bac-9d25-ed5c223b4aee	5a0d7652-a220-484b-a156-29cb40d211d3	X	154181291	154181291	C	T	SNP	CLIC2	NM_001289	human	genbank	54_36p	-1	reviewed	splice_site	c.293+1	e3+1	1	-	-	-	no_errors