Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID IQCC 55721 broad.mit.edu 36 1 32445780 32445780 + Missense_Mutation SNP A A T novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 MAP7D1 55700 broad.mit.edu 36 1 36418125 36418125 + Missense_Mutation SNP G G C novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 PRKAA2 5563 broad.mit.edu 36 1 56912766 56912766 + Missense_Mutation SNP T T A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 T T A A T T Unknown Valid Somatic Phase_I Capture Sequenom Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 BTBD8 284697 broad.mit.edu 36 1 92340678 92340678 + Missense_Mutation SNP G G T novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 LRIG2 9860 broad.mit.edu 36 1 113468234 113468234 + Missense_Mutation SNP T T G novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 T T G G T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 SLC22A15 55356 broad.mit.edu 36 1 116363748 116363748 + Missense_Mutation SNP C C A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture;Sequenom Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 RNF115 27246 broad.mit.edu 36 1 144393403 144393403 + Missense_Mutation SNP G G A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 SPRR2E 6704 broad.mit.edu 36 1 151332732 151332732 + Silent SNP C C T novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 ISG20L2 81875 broad.mit.edu 36 1 154959853 154959853 + Missense_Mutation SNP A A G novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 UCHL5 51377 broad.mit.edu 36 1 191285522 191285522 + Missense_Mutation SNP C C G novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 USH2A 7399 broad.mit.edu 36 1 214118802 214118802 + Missense_Mutation SNP C C A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 PRTFDC1 56952 broad.mit.edu 36 10 25200965 25200965 + Missense_Mutation SNP C C T novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 ANKRD30A 91074 broad.mit.edu 36 10 37470852 37470852 + Missense_Mutation SNP T T A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 SLC18A3 6572 broad.mit.edu 36 10 50490335 50490335 + Missense_Mutation SNP C C G novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 MYOZ1 58529 broad.mit.edu 36 10 75063684 75063684 + Silent SNP G G T novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 ELOVL3 83401 broad.mit.edu 36 10 103978940 103978940 + Missense_Mutation SNP C C A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 DCHS1 8642 broad.mit.edu 36 11 6609533 6609533 + Missense_Mutation SNP G G T novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 DDB2 1643 broad.mit.edu 36 11 47213528 47213528 + Missense_Mutation SNP A A C novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 A A C C A A Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 VWF 7450 broad.mit.edu 36 12 6054778 6054778 + Silent SNP G G A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 KRT6C 286887 broad.mit.edu 36 12 51149845 51149845 + Silent SNP G G A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 C12orf66 144577 broad.mit.edu 36 12 62895970 62895970 + Silent SNP G G A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 SACS 26278 broad.mit.edu 36 13 22810946 22810946 + Missense_Mutation SNP A A T novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 A A T T A A Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 ATP8A2 51761 broad.mit.edu 36 13 25042928 25042928 + Missense_Mutation SNP G G T novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G T T G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 INTS6 26512 broad.mit.edu 36 13 50846393 50846393 + Missense_Mutation SNP T T C novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 GRK1 6011 broad.mit.edu 36 13 113372123 113372123 + Missense_Mutation SNP G G T novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G T T G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 LRRC16B 90668 broad.mit.edu 36 14 23601595 23601595 + Silent SNP C C G novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 C14orf135 64430 broad.mit.edu 36 14 59661565 59661565 + Missense_Mutation SNP G G C novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 SPTB 6710 broad.mit.edu 36 14 64329952 64329952 + Missense_Mutation SNP G G C novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture;Sequenom Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 PTPN21 11099 broad.mit.edu 36 14 88006112 88006112 + Silent SNP G G C novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture;Sequenom Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 IGDCC4 57722 broad.mit.edu 36 15 63489665 63489665 + Missense_Mutation SNP T T A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 LASS3 204219 broad.mit.edu 36 15 98842345 98842345 + Nonsense_Mutation SNP C C A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 ZG16B 124220 broad.mit.edu 36 16 2821991 2821991 + Missense_Mutation SNP T T C novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 MMP2 4313 broad.mit.edu 36 16 54083231 54083231 + Missense_Mutation SNP G G C novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture;Sequenom Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 RLTPR 146206 broad.mit.edu 36 16 66239510 66239510 + Missense_Mutation SNP G G C novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 UNC45B 146862 broad.mit.edu 36 17 30506569 30506569 + Silent SNP C C A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 UNC45B 146862 broad.mit.edu 36 17 30537436 30537436 + Silent SNP C C A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 MGAT5B 146664 broad.mit.edu 36 17 72389849 72389849 + Missense_Mutation SNP G G A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 USP14 9097 broad.mit.edu 36 18 188094 188094 + Missense_Mutation SNP T T G novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 T T G G T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 CEP192 55125 broad.mit.edu 36 18 13046284 13046284 + Missense_Mutation SNP C C G rs73950982 unknown TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 CCBE1 147372 broad.mit.edu 36 18 55258017 55258017 + Missense_Mutation SNP G G T novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 SERPINB5 5268 broad.mit.edu 36 18 59321726 59321726 + Missense_Mutation SNP A A T novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 A A T T A A Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 CD97 976 broad.mit.edu 36 19 14369896 14369896 + Missense_Mutation SNP A A T novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 AP2A1 160 broad.mit.edu 36 19 54987066 54987066 + Missense_Mutation SNP C C T novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 FPR2 2358 broad.mit.edu 36 19 56964209 56964209 + Silent SNP C C G novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 MEMO1 51072 broad.mit.edu 36 2 31996505 31996505 + Missense_Mutation SNP A A T novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 CLEC4F 165530 broad.mit.edu 36 2 70897731 70897731 + Missense_Mutation SNP T T C novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 SNRNP200 23020 broad.mit.edu 36 2 96320908 96320908 + Silent SNP G G T novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 PTPN18 26469 broad.mit.edu 36 2 130843191 130843191 + Missense_Mutation SNP T T C novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 T T C C T T Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 ARHGEF4 50649 broad.mit.edu 36 2 131502040 131502040 + Missense_Mutation SNP C C A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 ACVR1 90 broad.mit.edu 36 2 158345220 158345220 + Missense_Mutation SNP C C A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 KCNH7 90134 broad.mit.edu 36 2 162961626 162961626 + Missense_Mutation SNP A A T novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 SCN9A 6335 broad.mit.edu 36 2 166857999 166857999 + Missense_Mutation SNP G G C novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G C C G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 TTN 7273 broad.mit.edu 36 2 179284993 179284993 + Missense_Mutation SNP T T C novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 T T C C T T Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 PPP1R7 5510 broad.mit.edu 36 2 241754482 241754482 + Missense_Mutation SNP T T C novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 T T C C T T Unknown Valid Somatic Phase_I Capture Sequenom Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 SIGLEC1 6614 broad.mit.edu 36 20 3622093 3622093 + Splice_Site SNP C C A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 ZNF133 7692 broad.mit.edu 36 20 18245068 18245068 + Silent SNP C C A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C A A C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 NCOA3 8202 broad.mit.edu 36 20 45698233 45698233 + Missense_Mutation SNP G G T novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G T T G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 TTLL8 164714 broad.mit.edu 36 22 48813919 48813919 + Silent SNP C C A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 C3orf20 84077 broad.mit.edu 36 3 14699308 14699308 + Silent SNP C C A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 SHQ1 55164 broad.mit.edu 36 3 72964217 72964217 + Missense_Mutation SNP G G T novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 FRG2C 100288801 broad.mit.edu 36 3 75797676 75797676 + Missense_Mutation SNP C C T novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 BCHE 590 broad.mit.edu 36 3 167030584 167030584 + Missense_Mutation SNP C C A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C A A C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 CPN2 1370 broad.mit.edu 36 3 195544478 195544478 + Missense_Mutation SNP C C A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 PIGZ 80235 broad.mit.edu 36 3 198163285 198163285 + Silent SNP T T A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture;Sequenom Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 ATP10D 57205 broad.mit.edu 36 4 47254715 47254715 + Missense_Mutation SNP A A T novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 PPEF2 5470 broad.mit.edu 36 4 77016653 77016653 + Nonsense_Mutation SNP G G T novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 BMP3 651 broad.mit.edu 36 4 82186177 82186177 + Missense_Mutation SNP A A G novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 MMRN1 22915 broad.mit.edu 36 4 91035335 91035335 + Nonsense_Mutation SNP G G T novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 MMRN1 22915 broad.mit.edu 36 4 91093337 91093337 + Silent SNP A A G novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 TNIP3 79931 broad.mit.edu 36 4 122287746 122287746 + Nonsense_Mutation SNP G G A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 FHDC1 85462 broad.mit.edu 36 4 154094886 154094886 + Missense_Mutation SNP C C G novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 CPE 1363 broad.mit.edu 36 4 166625129 166625129 + Missense_Mutation SNP C C A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 SEMA5A 9037 broad.mit.edu 36 5 9277934 9277934 + Silent SNP C C T novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 DNAH5 1767 broad.mit.edu 36 5 13822114 13822114 + Silent SNP C C A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 DNAH5 1767 broad.mit.edu 36 5 13822233 13822233 + Missense_Mutation SNP C C T novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 JAKMIP2 9832 broad.mit.edu 36 5 147031461 147031461 + Missense_Mutation SNP C C G novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 USP49 25862 broad.mit.edu 36 6 41879597 41879597 + Missense_Mutation SNP G G A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 SUPT3H 8464 broad.mit.edu 36 6 45079473 45079473 + Silent SNP T T C novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 GRIK2 2898 broad.mit.edu 36 6 102372964 102372964 + Silent SNP C C G novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 SAMD3 154075 broad.mit.edu 36 6 130517856 130517856 + Missense_Mutation SNP G G A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 IYD 389434 broad.mit.edu 36 6 150732019 150732019 + Missense_Mutation SNP C C A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 KIF25 3834 broad.mit.edu 36 6 168173123 168173123 + Missense_Mutation SNP G G T novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 HECW1 23072 broad.mit.edu 36 7 43462495 43462495 + Missense_Mutation SNP C C G novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture;Sequenom Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 BUD31 8896 broad.mit.edu 36 7 98846658 98846658 + Missense_Mutation SNP A A G novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 MUC17 140453 broad.mit.edu 36 7 100469055 100469055 + Silent SNP G G A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 KCND2 3751 broad.mit.edu 36 7 119702624 119702624 + Silent SNP G G T novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 PRAGMIN 157285 broad.mit.edu 36 8 8234453 8234453 + Silent SNP G G A rs56187292 unknown TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 MYST3 7994 broad.mit.edu 36 8 41951494 41951494 + Missense_Mutation SNP T T C novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 T T C C T T Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 FANCG 2189 broad.mit.edu 36 9 35066001 35066001 + Silent SNP G G A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 TLN1 7094 broad.mit.edu 36 9 35714624 35714624 + Silent SNP C C A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C A A C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 TMEM2 23670 broad.mit.edu 36 9 73494923 73494923 + Silent SNP C C T novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 PRUNE2 158471 broad.mit.edu 36 9 78511811 78511811 + Missense_Mutation SNP C C G novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C G G C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 HDAC6 10013 broad.mit.edu 36 X 48549720 48549720 + Silent SNP C C T novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 HDAC6 10013 broad.mit.edu 36 X 48559520 48559520 + Silent SNP T T C novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 STARD8 9754 broad.mit.edu 36 X 67855089 67855089 + Missense_Mutation SNP C C A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C A A C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 RLIM 51132 broad.mit.edu 36 X 73729525 73729525 + Missense_Mutation SNP C C A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 ODZ1 10178 broad.mit.edu 36 X 123345668 123345668 + Missense_Mutation SNP G G A novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 GPR112 139378 broad.mit.edu 36 X 135255144 135255144 + Missense_Mutation SNP C C G novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C G G C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 TP53 7157 broad.mit.edu 36 17 7517827 7517827 + Missense_Mutation SNP C C T novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50 HNF1B 6928 broad.mit.edu 36 17 33144652 33144662 + Frame_Shift_Del DEL TGGCCTGGGTC - - novel none TCGA-13-0904-01A-02W-0420-08 TCGA-13-0904-10A-01D-0399-08 TGGCCTGGGTC TGGCCTGGGTC - - TGGCCTGGGTC TGGCCTGGGTC Unknown Valid Somatic Phase_I Capture Illumina_Capture Illumina GAIIx bfa7177f-6d7e-4f20-b9c3-00eab658e818 176f3503-c00c-455e-b49a-e4fafe4dcb50