Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID SPEN 23013 broad.mit.edu 36 1 16133869 16133869 + Silent SNP G G A novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 G G A A G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA;ManualReview;Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 AIM2 9447 broad.mit.edu 36 1 157309709 157309709 + Missense_Mutation SNP A A T novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 A A T T A A Unknown Valid Somatic Phase_I Capture 454_PCR_WGA;Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 AHNAK 79026 broad.mit.edu 36 11 62057585 62057585 + Missense_Mutation SNP G G T novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 G G T T G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 C11orf52 91894 broad.mit.edu 36 11 111301625 111301625 + Nonsense_Mutation SNP C C T novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 C C T T C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 GLB1L3 112937 broad.mit.edu 36 11 133682227 133682227 + Splice_Site SNP G G T novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 G G T T G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 SACS 26278 broad.mit.edu 36 13 22809439 22809439 + Silent SNP G G A novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 G G A A G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA;ManualReview;Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 TBC1D4 9882 broad.mit.edu 36 13 74767118 74767118 + Silent SNP A A G novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 A A G G A A Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 C14orf115 55237 broad.mit.edu 36 14 73894783 73894783 + Missense_Mutation SNP C C T novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 C C T T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA;Sequenom Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 GABRB3 2562 broad.mit.edu 36 15 24344296 24344296 + Missense_Mutation SNP C C T novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 C C T T C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 PDPK1 5170 broad.mit.edu 36 16 2587125 2587125 + Missense_Mutation SNP G G C novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 G G C C G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 PNPLA6 10908 broad.mit.edu 36 19 7527564 7527564 + Silent SNP C C T novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 ZNF486 90649 broad.mit.edu 36 19 20168880 20168880 + Missense_Mutation SNP C C T novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 C C T T C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 EXOC6B 23233 broad.mit.edu 36 2 72580564 72580564 + Missense_Mutation SNP T T A novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 T T A A T T Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 CNTNAP5 129684 broad.mit.edu 36 2 124978470 124978470 + Silent SNP A A C novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 A A C C A A Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 CHRNA1 1134 broad.mit.edu 36 2 175327322 175327322 + Silent SNP C C T novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 C C T T C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 CPO 130749 broad.mit.edu 36 2 207512599 207512599 + Silent SNP T T C novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 T T C C T T Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 PLCD4 84812 broad.mit.edu 36 2 219206695 219206695 + Missense_Mutation SNP G G A novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 PAX3 5077 broad.mit.edu 36 2 222866714 222866714 + Missense_Mutation SNP G G T novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 CST1 1469 broad.mit.edu 36 20 23679339 23679339 + Silent SNP A A G rs3188296 unknown TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 A A G G A A Unknown Valid Somatic Phase_I Capture ManualReview;Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 HYAL2 8692 broad.mit.edu 36 3 50332670 50332670 + Silent SNP C C G novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 C C G G C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA;Sequenom;Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 GPR149 344758 broad.mit.edu 36 3 155629846 155629846 + Missense_Mutation SNP C C T novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 C C T T C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 LPP 4026 broad.mit.edu 36 3 190074923 190074923 + Missense_Mutation SNP A A C novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 A A C C A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 ANKRD6 22881 broad.mit.edu 36 6 90333529 90333529 + Missense_Mutation SNP A A T novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 A A T T A A Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 KIAA0776 23376 broad.mit.edu 36 6 97095212 97095212 + Silent SNP T T C novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 T T C C T T Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 PDE7B 27115 broad.mit.edu 36 6 136517000 136517000 + Missense_Mutation SNP G G T novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 G G T T G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 C7orf63 79846 broad.mit.edu 36 7 89776561 89776561 + Missense_Mutation SNP A A C novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 A A C C A A Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 FAM133B 257415 broad.mit.edu 36 7 92033277 92033277 + Missense_Mutation SNP C C T novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 C C T T C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 HEPACAM2 253012 broad.mit.edu 36 7 92663113 92663113 + Silent SNP T T C novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 T T C C T T Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 GYG2 8908 broad.mit.edu 36 X 2784571 2784571 + Missense_Mutation SNP A A T novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 TP53 7157 broad.mit.edu 36 17 7514709 7514710 + Frame_Shift_Ins INS - - AGGCCTT novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 - - AGGCCTT AGGCCTT - - Unknown Valid Somatic Phase_I Capture Illumina_Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3 ASTN2 23245 broad.mit.edu 36 9 118289579 118289588 + Frame_Shift_Del DEL TCAGCAAAAC - TCAGCAAAAC novel none TCGA-13-0751-01A-01D-0446-08 TCGA-13-0751-10A-01D-0446-08 TCAGCAAAAC TCAGCAAAAC - - TCAGCAAAAC TCAGCAAAAC Unknown Valid Somatic Phase_I Capture Illumina_Capture Illumina GAIIx 9f335cd1-2736-41be-a02b-cdbe4017bb3d f7803d4b-8f86-40d9-8000-1d8301440cb3