Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ATP8A2 51761 hgsc.bcm.edu 36 13 24941210 24941211 + Frame_Shift_Ins INS - - T novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 - - . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 C7orf70 84792 hgsc.bcm.edu 36 7 6337095 6337095 + Silent SNP A A G rs61996356 TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 A A . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 CREBBP 1387 hgsc.bcm.edu 36 16 3760802 3760802 + Missense_Mutation SNP C C T novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 DNAH5 1767 hgsc.bcm.edu 36 5 13830370 13830373 + Frame_Shift_Del DEL TGTC TGTC - novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 TGTC TGTC . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 FANCA 2175 hgsc.bcm.edu 36 16 88343806 88343807 + Frame_Shift_Ins INS - - A novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 - - . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 FITM1 161247 hgsc.bcm.edu 36 14 23670707 23670707 + Frame_Shift_Del DEL C C - novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 KCNIP3 30818 hgsc.bcm.edu 36 2 95403795 95403795 + Missense_Mutation SNP T T C novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 T T . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 MYH7B 57644 hgsc.bcm.edu 36 20 33032526 33032526 + Splice_Site SNP T T G novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 T T . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 NLRC5 84166 hgsc.bcm.edu 36 16 55673842 55673842 + Frame_Shift_Del DEL C C - novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 PINX1 54984 hgsc.bcm.edu 36 8 10660825 10660825 + Missense_Mutation SNP A A C novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 A A . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 PLA2G4D 283748 hgsc.bcm.edu 36 15 40164629 40164629 + Splice_Site SNP C C T novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 PPARD 5467 hgsc.bcm.edu 36 6 35500144 35500144 + Nonsense_Mutation SNP C C T novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 PRICKLE4 29964 hgsc.bcm.edu 36 6 41862551 41862552 + In_Frame_Ins INS - - CTT novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 - - . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 PTK6 5753 hgsc.bcm.edu 36 20 61632607 61632607 + Missense_Mutation SNP T T C novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 T T . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 RB1 5925 hgsc.bcm.edu 36 13 47928388 47928388 + Missense_Mutation SNP G G C novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 G G . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 SLC39A12 221074 hgsc.bcm.edu 36 10 18310417 18310417 + Missense_Mutation SNP G G C novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 G G . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 STK10 6793 hgsc.bcm.edu 36 5 171453345 171453345 + Frame_Shift_Del DEL C C - novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 TECPR2 9895 hgsc.bcm.edu 36 14 101970556 101970556 + Frame_Shift_Del DEL T T - novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 T T . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 ZFP64 55734 hgsc.bcm.edu 36 20 50202719 50202719 + Frame_Shift_Del DEL C C - novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 CLDN18 51208 hgsc.bcm.edu 36 3 139200500 139200500 + Missense_Mutation SNP G G A novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 G G G A G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 GORASP1 64689 hgsc.bcm.edu 36 3 39114975 39114975 + Missense_Mutation SNP G G C novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 G G G C G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 HTR2A 3356 hgsc.bcm.edu 36 13 46364629 46364629 + Silent SNP C C T novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 C C C T C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 SGEF 26084 hgsc.bcm.edu 36 3 155426382 155426382 + Silent SNP A A G novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 A A A G A A Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 SR140 23350 hgsc.bcm.edu 36 3 144236469 144236469 + Missense_Mutation SNP C C T novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 C C C T C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 WDR47 22911 hgsc.bcm.edu 36 1 109339758 109339758 + Missense_Mutation SNP G G C novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 G G G C G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 WDR74 54663 hgsc.bcm.edu 36 11 62358533 62358533 + Missense_Mutation SNP G G C novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 G G G C G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 ASTN1 460 hgsc.bcm.edu 36 1 175104627 175104627 + Missense_Mutation SNP C C T novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 C C C T C C Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 C5orf42 65250 hgsc.bcm.edu 36 5 37220792 37220792 + Missense_Mutation SNP G G C novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 G G G C G G Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 CDH6 1004 hgsc.bcm.edu 36 5 31358918 31358918 + Missense_Mutation SNP C C T novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 C C C T C C Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 GRIN2B 2904 hgsc.bcm.edu 36 12 13659413 13659413 + Missense_Mutation SNP C C T novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 C C C T C C Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 HMCN1 83872 hgsc.bcm.edu 36 1 184147523 184147523 + Missense_Mutation SNP G G A novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 G G G A G G Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 HYDIN 54768 hgsc.bcm.edu 36 16 69418777 69418777 + Missense_Mutation SNP G G A novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 G G G A G G Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 RHOA 387 hgsc.bcm.edu 36 3 49387977 49387977 + Missense_Mutation SNP C C A novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 C C C A C C Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 SULF2 55959 hgsc.bcm.edu 36 20 45798860 45798860 + Missense_Mutation SNP G G A novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 G G G A G G Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 TNNI3K 51086 hgsc.bcm.edu 36 1 74701769 74701769 + Missense_Mutation SNP A A T novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 A A A T A A Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4 TP53 7157 hgsc.bcm.edu 36 17 7519119 7519119 + Missense_Mutation SNP T C C novel TCGA-04-1350-01A-01W-0490-10 TCGA-04-1350-11A-01W-0490-10 T T C C T T Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 4e5ce961-8a08-4a0f-a672-3049647ae478 6a7716cb-ecbd-4f56-836b-f2651b2119b4