Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
TMEM57	55219	broad.mit.edu	36	1	25690650	25690650	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-61-2016-01	TCGA-61-2016-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	25690650	25690650	TMEM57	1	G	G	A	37
CATSPER4	378807	broad.mit.edu	36	1	26400507	26400507	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-61-2016-01	TCGA-61-2016-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	26400507	26400507	CATSPER4	1	G	G	A	37
CCDC17	149483	broad.mit.edu	36	1	45859040	45859040	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-61-2016-01	TCGA-61-2016-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	45859040	45859040	CCDC17	1	A	A	G	14
DOCK7	85440	broad.mit.edu	36	1	62869514	62869514	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-61-2016-01	TCGA-61-2016-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	62869514	62869514	DOCK7	1	C	C	T	32
SGIP1	84251	broad.mit.edu	36	1	66927510	66927510	+	Silent	SNP	A	A	T	novel	Unknown	TCGA-61-2016-01	TCGA-61-2016-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	66927510	66927510	SGIP1	1	A	A	T	5
NRAS	4893	broad.mit.edu	36	1	115058052	115058052	+	Missense_Mutation	SNP	T	T	C	rs11554290	byHapMap	TCGA-61-2016-01	TCGA-61-2016-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	115058052	115058052	NRAS	1	T	T	C	63
XCL2	6846	broad.mit.edu	36	1	166777941	166777941	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-61-2016-01	TCGA-61-2016-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	166777941	166777941	XCL2	1	C	C	G	30
FAT3	120114	broad.mit.edu	36	11	92171110	92171110	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-61-2016-01	TCGA-61-2016-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	92171110	92171110	FAT3	11	T	T	A	51
COQ10A	93058	broad.mit.edu	36	12	54947934	54947934	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-61-2016-01	TCGA-61-2016-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	54947934	54947934	COQ10A	12	G	G	C	41
MOAP1	64112	broad.mit.edu	36	14	92720042	92720042	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-61-2016-01	TCGA-61-2016-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	92720042	92720042	MOAP1	14	T	T	C	52
SCNN1B	6338	broad.mit.edu	36	16	23299425	23299425	+	Silent	SNP	G	G	C	novel	Unknown	TCGA-61-2016-01	TCGA-61-2016-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	23299425	23299425	SCNN1B	16	G	G	C	38
TP53	7157	broad.mit.edu	36	17	7518964	7518964	+	Nonsense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-61-2016-01	TCGA-61-2016-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Nonsense_Mutation	SNP	7518964	7518964	TP53	17	C	C	A	30
ABCA10	10349	broad.mit.edu	36	17	64695444	64695444	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-61-2016-01	TCGA-61-2016-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	64695444	64695444	ABCA10	17	C	C	A	24
SNRNP200	23020	broad.mit.edu	36	2	96306446	96306446	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-61-2016-01	TCGA-61-2016-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	96306446	96306446	SNRNP200	2	C	C	T	23
KCNG1	3755	broad.mit.edu	36	20	49059728	49059728	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-61-2016-01	TCGA-61-2016-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	49059728	49059728	KCNG1	20	C	C	T	24
CWH43	80157	broad.mit.edu	36	4	48700604	48700604	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-61-2016-01	TCGA-61-2016-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	48700604	48700604	CWH43	4	C	C	A	21
SCML4	256380	broad.mit.edu	36	6	108177686	108177686	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-61-2016-01	TCGA-61-2016-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	108177686	108177686	SCML4	6	G	G	T	41
OR2A4	79541	broad.mit.edu	36	6	132064162	132064162	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-61-2016-01	TCGA-61-2016-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	132064162	132064162	OR2A4	6	G	G	A	34
ZNF804B	219578	broad.mit.edu	36	7	88802338	88802338	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-61-2016-01	TCGA-61-2016-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	88802338	88802338	ZNF804B	7	G	G	C	36
DGKI	9162	broad.mit.edu	36	7	136955144	136955144	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-61-2016-01	TCGA-61-2016-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	136955144	136955144	DGKI	7	G	G	A	39
TRPV6	55503	broad.mit.edu	36	7	142279840	142279840	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-61-2016-01	TCGA-61-2016-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	142279840	142279840	TRPV6	7	G	G	A	44
ZAN	7455	broad.mit.edu	36	7	100223498	100223532	+	Frame_Shift_Del	DEL	GCTTCAGCTACCGCTTGCAAGGCCGCATGACCTAT	-	-	novel	Unknown	TCGA-61-2016-01	TCGA-61-2016-10							Unknown	Unknown	Unknown	Phase_I	Capture	---			Illumina GAIIx	Broad	Frame_Shift_Del	DEL	100223498	100223532	ZAN	7	GCTTCAGCTACCGCTTGCAAGGCCGCATGACCTAT	-	-	42