Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer dataset type classification start end gene chr ref_allele tum_allele1 tum_allele2 context TP53 7157 genome.wustl.edu 36 17 7518305 7518305 + Missense_Mutation SNP T T C novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 7518305 7518305 TP53 17 T T C 57 CEP192 55125 genome.wustl.edu 36 18 13046381 13046381 + Silent SNP G G T novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 13046381 13046381 CEP192 18 G G T 44 NHLRC1 378884 genome.wustl.edu 36 6 18229881 18229881 + Silent SNP C T T novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 18229881 18229881 NHLRC1 6 C T T 29 TUBA3C 7278 genome.wustl.edu 36 13 18646050 18646051 + Missense DNP CC CC AA novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 CC CC CC AA CC CC Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense DNP 18646050 18646051 TUBA3C 13 CC CC AA 22 SEZ6L 23544 genome.wustl.edu 36 22 25018759 25018759 + Missense_Mutation SNP C C T novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 25018759 25018759 SEZ6L 22 C C T 19 GTF3A 2971 genome.wustl.edu 36 13 26907711 26907711 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 26907711 26907711 GTF3A 13 G G A 36 CHN2 1124 genome.wustl.edu 36 7 29406693 29406693 + Missense_Mutation SNP C C T novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 29406693 29406693 CHN2 7 C C T 18 ZCCHC7 84186 genome.wustl.edu 36 9 37294239 37294239 + Missense_Mutation SNP G G C novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 37294239 37294239 ZCCHC7 9 G G C 34 GFAP 2670 genome.wustl.edu 36 17 40346652 40346652 + Silent SNP C C T novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 40346652 40346652 GFAP 17 C C T 32 R3HDML 140902 genome.wustl.edu 36 20 42405541 42405541 + Missense_Mutation SNP C C A novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 42405541 42405541 R3HDML 20 C C A 22 TRIM37 4591 genome.wustl.edu 36 17 54483461 54483461 + Missense_Mutation SNP G G C novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 54483461 54483461 TRIM37 17 G G C 40 MED13 9969 genome.wustl.edu 36 17 57387829 57387829 + Missense_Mutation SNP T T G novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 57387829 57387829 MED13 17 T T G 49 FLNB 2317 genome.wustl.edu 36 3 58084165 58084165 + Silent SNP G G A novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 58084165 58084165 FLNB 3 G G A 34 SDHAF2 54949 genome.wustl.edu 36 11 60962141 60962141 + Missense_Mutation SNP A A G novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 60962141 60962141 SDHAF2 11 A A G 12 ERBB2IP 55914 genome.wustl.edu 36 5 65385839 65385839 + Missense_Mutation SNP C C G novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 65385839 65385839 ERBB2IP 5 C C G 30 SLC9A5 6553 genome.wustl.edu 36 16 65855797 65855797 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 65855797 65855797 SLC9A5 16 G G A 38 AUTS2 26053 genome.wustl.edu 36 7 69866088 69866088 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 69866088 69866088 AUTS2 7 G G A 45 SLCO5A1 81796 genome.wustl.edu 36 8 70748033 70748033 + Silent SNP A A G novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 70748033 70748033 SLCO5A1 8 A A G 2 CASD1 64921 genome.wustl.edu 36 7 94005092 94005092 + Missense_Mutation SNP A A G novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 94005092 94005092 CASD1 7 A A G 4 ASNS 440 genome.wustl.edu 36 7 97336247 97336247 + Missense_Mutation SNP A A G novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 97336247 97336247 ASNS 7 A A G 2 RNF19A 25897 genome.wustl.edu 36 8 101369047 101369047 + Missense_Mutation SNP C C T novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 101369047 101369047 RNF19A 8 C C T 32 AHNAK2 113146 genome.wustl.edu 36 14 104484262 104484262 + Silent SNP C C T novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 104484262 104484262 AHNAK2 14 C C T 32 ABRA 137735 genome.wustl.edu 36 8 107842709 107842709 + Missense_Mutation SNP G G T novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 107842709 107842709 ABRA 8 G G T 44 NPHP1 4867 genome.wustl.edu 36 2 110284692 110284692 + Missense_Mutation SNP C C G novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 110284692 110284692 NPHP1 2 C C G 20 CSMD3 114788 genome.wustl.edu 36 8 113655017 113655017 + Missense_Mutation SNP T T G novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 T T T G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 113655017 113655017 CSMD3 8 T T G 57 AFAP1L2 84632 genome.wustl.edu 36 10 116050271 116050271 + Missense_Mutation SNP C C T novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 116050271 116050271 AFAP1L2 10 C C T 26 SLC35F1 222553 genome.wustl.edu 36 6 118713145 118713145 + Missense_Mutation SNP C C G novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 118713145 118713145 SLC35F1 6 C C G 17 ENPP2 5168 genome.wustl.edu 36 8 120698889 120698889 + Missense_Mutation SNP A A T novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 A A Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 120698889 120698889 ENPP2 8 A A T 15 ROBO3 64221 genome.wustl.edu 36 11 124255593 124255593 + Missense_Mutation SNP C C T novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 124255593 124255593 ROBO3 11 C C T 19 PCDHA3 56145 genome.wustl.edu 36 5 140162580 140162580 + Silent SNP C C T novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 140162580 140162580 PCDHA3 5 C C T 27 TCHHL1 126637 genome.wustl.edu 36 1 150326132 150326132 + Missense_Mutation SNP T T A novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 150326132 150326132 TCHHL1 1 T T A 56 PLEKHG1 57480 genome.wustl.edu 36 6 151096794 151096794 + Nonsense_Mutation SNP C C G novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 C C C G C C Unknown Valid Somatic 4 Capture Sanger_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 151096794 151096794 PLEKHG1 6 C C G 29 NUP210L 91181 genome.wustl.edu 36 1 152296007 152296007 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 152296007 152296007 NUP210L 1 G G A 33 PYHIN1 149628 genome.wustl.edu 36 1 157175519 157175519 + Missense_Mutation SNP A A G novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 157175519 157175519 PYHIN1 1 A A G 11 KCNMB2 10242 genome.wustl.edu 36 3 180043309 180043309 + Missense_Mutation SNP C C G novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 180043309 180043309 KCNMB2 3 C C G 20 USH2A 7399 genome.wustl.edu 36 1 213968176 213968176 + Missense_Mutation SNP T T C novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 213968176 213968176 USH2A 1 T T C 62 COL6A3 1293 genome.wustl.edu 36 2 237945697 237945697 + Silent SNP C C A novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 237945697 237945697 COL6A3 2 C C A 21 CRTAC1 55118 genome.wustl.edu 36 10 99634050 99634050 + Missense_Mutation SNP A A C novel Unknown TCGA-24-1425-01 TCGA-24-1425-10 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 99634050 99634050 CRTAC1 10 A A C 8