Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer dataset type classification start end gene chr ref_allele tum_allele1 tum_allele2 context ECE1 1889 broad.mit.edu 36 1 21419087 21419087 + Missense_Mutation SNP C C T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 21419087 21419087 ECE1 1 C C T 27 KIAA1522 57648 broad.mit.edu 36 1 33008802 33008802 + Missense_Mutation SNP C C T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 33008802 33008802 KIAA1522 1 C C T 31 HIVEP3 59269 broad.mit.edu 36 1 41821633 41821633 + Missense_Mutation SNP C C T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 41821633 41821633 HIVEP3 1 C C T 19 PDE4DIP 9659 broad.mit.edu 36 1 143706014 143706014 + Silent SNP G G A novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 G A G G Unknown Valid Somatic x x Sequenom_PCR_WGA x Broad Silent SNP 143706014 143706014 PDE4DIP 1 G G A 46 BCAN 63827 broad.mit.edu 36 1 154883437 154883437 + Nonsense_Mutation SNP C C G novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Nonsense_Mutation SNP 154883437 154883437 BCAN 1 C C G 18 INSRR 3645 broad.mit.edu 36 1 155088088 155088088 + Missense_Mutation SNP C C T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 C T C C Unknown Valid Somatic x x Sequenom_PCR_WGA x Broad Missense_Mutation SNP 155088088 155088088 INSRR 1 C C T 28 USH2A 7399 broad.mit.edu 36 1 214661887 214661887 + Missense_Mutation SNP G G T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 214661887 214661887 USH2A 1 G G T 41 WNT9A 7483 broad.mit.edu 36 1 226176150 226176150 + Missense_Mutation SNP C C T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 226176150 226176150 WNT9A 1 C C T 26 ITIH2 3698 broad.mit.edu 36 10 7791086 7791086 + Missense_Mutation SNP C C A novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 7791086 7791086 ITIH2 10 C C A 17 CTNNA3 29119 broad.mit.edu 36 10 68610239 68610239 + Nonsense_Mutation SNP G G A novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Nonsense_Mutation SNP 68610239 68610239 CTNNA3 10 G G A 40 KIF20B 9585 broad.mit.edu 36 10 91469206 91469206 + Silent SNP T T C novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 91469206 91469206 KIF20B 10 T T C 55 ARHGAP19 84986 broad.mit.edu 36 10 99042323 99042323 + Missense_Mutation SNP G G A novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 99042323 99042323 ARHGAP19 10 G G A 39 CARS 833 broad.mit.edu 36 11 2984708 2984708 + Missense_Mutation SNP C C A novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 C A C C Unknown Valid Somatic x x Sequenom_PCR_WGA x Broad Missense_Mutation SNP 2984708 2984708 CARS 11 C C A 22 C11orf41 25758 broad.mit.edu 36 11 33520608 33520608 + Missense_Mutation SNP A A T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 33520608 33520608 C11orf41 11 A A T 12 OR4X1 390113 broad.mit.edu 36 11 48242166 48242166 + Missense_Mutation SNP T T G novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 48242166 48242166 OR4X1 11 T T G 56 LRRC55 219527 broad.mit.edu 36 11 56706342 56706342 + Missense_Mutation SNP G G T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 56706342 56706342 LRRC55 11 G G T 34 MMP13 4322 broad.mit.edu 36 11 102331557 102331557 + Missense_Mutation SNP C C T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 102331557 102331557 MMP13 11 C C T 29 TECTA 7007 broad.mit.edu 36 11 120533837 120533837 + Silent SNP G G A novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 G A G G Unknown Valid Somatic x x Sequenom_PCR_WGA x Broad Silent SNP 120533837 120533837 TECTA 11 G G A 38 ARHGAP32 9743 broad.mit.edu 36 11 128498618 128498618 + Missense_Mutation SNP C C G novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 128498618 128498618 ARHGAP32 11 C C G 18 SLCO1B3 28234 broad.mit.edu 36 12 20945663 20945663 + Silent SNP T T C novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 20945663 20945663 SLCO1B3 12 T T C 64 CCDC65 85478 broad.mit.edu 36 12 47601482 47601482 + Missense_Mutation SNP C C G novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 47601482 47601482 CCDC65 12 C C G 30 SRGAP1 57522 broad.mit.edu 36 12 62808180 62808180 + Missense_Mutation SNP C C G novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 62808180 62808180 SRGAP1 12 C C G 30 WIF1 11197 broad.mit.edu 36 12 63800463 63800463 + Splice_Site_SNP SNP C C G novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Splice_Site_SNP SNP 63800463 63800463 WIF1 12 C C G 18 BTBD11 121551 broad.mit.edu 36 12 106536157 106536157 + Missense_Mutation SNP C C T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 106536157 106536157 BTBD11 12 C C T 27 COQ5 84274 broad.mit.edu 36 12 119426212 119426212 + Nonsense_Mutation SNP C C A novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 C A C C Unknown Valid Somatic x x Sequenom_PCR_WGA x Broad Nonsense_Mutation SNP 119426212 119426212 COQ5 12 C C A 21 TMEM132B 114795 broad.mit.edu 36 12 124701239 124701239 + Silent SNP C C T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 124701239 124701239 TMEM132B 12 C C T 22 N4BP2L1 90634 broad.mit.edu 36 13 31876397 31876397 + Silent SNP G G A novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 G A G G Unknown Valid Somatic x x Sequenom_PCR_WGA x Broad Silent SNP 31876397 31876397 N4BP2L1 13 G G A 39 FREM2 341640 broad.mit.edu 36 13 38351024 38351024 + Silent SNP C C A novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 38351024 38351024 FREM2 13 C C A 21 RNASE9 390443 broad.mit.edu 36 14 20094609 20094609 + Missense_Mutation SNP T T G novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 20094609 20094609 RNASE9 14 T T G 61 SPG11 80208 broad.mit.edu 36 15 42708804 42708804 + Missense_Mutation SNP T T G novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 42708804 42708804 SPG11 15 T T G 63 RORA 6095 broad.mit.edu 36 15 58706824 58706824 + Missense_Mutation SNP C C A novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 58706824 58706824 RORA 15 C C A 24 CDK10 8558 broad.mit.edu 36 16 88286410 88286410 + Missense_Mutation SNP A A G novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 A G A A Unknown Valid Somatic x x Sequenom_PCR_WGA x Broad Missense_Mutation SNP 88286410 88286410 CDK10 16 A A G 2 TP53 7157 broad.mit.edu 36 17 7519225 7519225 + Nonsense_Mutation SNP G G A novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Nonsense_Mutation SNP 7519225 7519225 TP53 17 G G A 46 SPIRE1 56907 broad.mit.edu 36 18 12454875 12454875 + Missense_Mutation SNP G G A novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 12454875 12454875 SPIRE1 18 G G A 48 KIAA1468 57614 broad.mit.edu 36 18 58045615 58045615 + Silent SNP G G T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 58045615 58045615 KIAA1468 18 G G T 47 ZNF236 7776 broad.mit.edu 36 18 72692785 72692785 + Missense_Mutation SNP A A C novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 72692785 72692785 ZNF236 18 A A C 6 BST2 684 broad.mit.edu 36 19 17377280 17377280 + Silent SNP C C G novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 17377280 17377280 BST2 19 C C G 29 NCCRP1 342897 broad.mit.edu 36 19 44381652 44381652 + Missense_Mutation SNP G G C novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 44381652 44381652 NCCRP1 19 G G C 47 CYP2A13 1553 broad.mit.edu 36 19 46286716 46286716 + Missense_Mutation SNP C C T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 C T C C Unknown Valid Somatic x x Sequenom_PCR_WGA x Broad Missense_Mutation SNP 46286716 46286716 CYP2A13 19 C C T 26 LMTK3 114783 broad.mit.edu 36 19 53686180 53686180 + Missense_Mutation SNP C C A novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 53686180 53686180 LMTK3 19 C C A 27 DPYSL5 56896 broad.mit.edu 36 2 27018981 27018981 + Missense_Mutation SNP C C G novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 27018981 27018981 DPYSL5 2 C C G 19 SPDYA 245711 broad.mit.edu 36 2 28892510 28892510 + Missense_Mutation SNP T T G novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 28892510 28892510 SPDYA 2 T T G 52 EPAS1 2034 broad.mit.edu 36 2 46465164 46465165 + Missense_Mutation DNP GG GG CC novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation DNP 46465164 46465165 EPAS1 2 GG GG CC 39 FAHD2A 51011 broad.mit.edu 36 2 95440028 95440028 + Silent SNP C C T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 95440028 95440028 FAHD2A 2 C C T 23 LCT 3938 broad.mit.edu 36 2 136283658 136283658 + Missense_Mutation SNP C C A novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 C A C C Unknown Valid Somatic x x Sequenom_PCR_WGA x Broad Missense_Mutation SNP 136283658 136283658 LCT 2 C C A 26 ITGAV 3685 broad.mit.edu 36 2 187214440 187214440 + Missense_Mutation SNP G G C novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 187214440 187214440 ITGAV 2 G G C 36 CDK5RAP1 51654 broad.mit.edu 36 20 31443648 31443648 + Missense_Mutation SNP G G A novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 31443648 31443648 CDK5RAP1 20 G G A 38 LPIN3 64900 broad.mit.edu 36 20 39420549 39420549 + Silent SNP C C T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 39420549 39420549 LPIN3 20 C C T 18 SLC2A10 81031 broad.mit.edu 36 20 44788315 44788315 + Silent SNP C C T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 44788315 44788315 SLC2A10 20 C C T 23 KRTAP26-1 388818 broad.mit.edu 36 21 30613710 30613710 + Missense_Mutation SNP C C T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 30613710 30613710 KRTAP26-1 21 C C T 19 COL6A2 1292 broad.mit.edu 36 21 46376631 46376631 + Missense_Mutation SNP C C T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 46376631 46376631 COL6A2 21 C C T 27 OGG1 4968 broad.mit.edu 36 3 9782658 9782658 + Missense_Mutation SNP G G C novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 G C G G Unknown Valid Somatic x x Sequenom_PCR_WGA x Broad Missense_Mutation SNP 9782658 9782658 OGG1 3 G G C 45 DOCK3 1795 broad.mit.edu 36 3 51102713 51102713 + Missense_Mutation SNP C C T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 C T C C Unknown Valid Somatic x x Sequenom_PCR_WGA x Broad Missense_Mutation SNP 51102713 51102713 DOCK3 3 C C T 27 PTPRG 5793 broad.mit.edu 36 3 62164144 62164144 + Missense_Mutation SNP C C G novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 C G C C Unknown Valid Somatic x x Sequenom_PCR_WGA x Broad Missense_Mutation SNP 62164144 62164144 PTPRG 3 C C G 25 UBA3 9039 broad.mit.edu 36 3 69193968 69193968 + Missense_Mutation SNP C C T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 69193968 69193968 UBA3 3 C C T 17 ZBTB38 253461 broad.mit.edu 36 3 142646681 142646681 + Missense_Mutation SNP A A G novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 142646681 142646681 ZBTB38 3 A A G 5 EIF2A 83939 broad.mit.edu 36 3 151772489 151772489 + Missense_Mutation SNP G G T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 151772489 151772489 EIF2A 3 G G T 48 MUC4 4585 broad.mit.edu 36 3 196984202 196984202 + Missense_Mutation SNP C C G novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 196984202 196984202 MUC4 3 C C G 22 DNAH5 1767 broad.mit.edu 36 5 13823874 13823874 + Missense_Mutation SNP G G A novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 13823874 13823874 DNAH5 5 G G A 38 MSH3 4437 broad.mit.edu 36 5 80003900 80003900 + Missense_Mutation SNP G G C novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 G C G G Unknown Valid Somatic x x Sequenom_PCR_WGA x Broad Missense_Mutation SNP 80003900 80003900 MSH3 5 G G C 48 FBN2 2201 broad.mit.edu 36 5 127652801 127652801 + Missense_Mutation SNP C C T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 C T C C Unknown Valid Somatic x x Sequenom_PCR_WGA x Broad Missense_Mutation SNP 127652801 127652801 FBN2 5 C C T 18 GPX6 257202 broad.mit.edu 36 6 28591423 28591423 + Missense_Mutation SNP T T G novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 T G T T Unknown Valid Somatic x x Sequenom_PCR_WGA x Broad Missense_Mutation SNP 28591423 28591423 GPX6 6 T T G 63 MSH5 4439 broad.mit.edu 36 6 31835858 31835858 + Missense_Mutation SNP G G T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 G T G G Unknown Valid Somatic x x Sequenom_PCR_WGA x Broad Missense_Mutation SNP 31835858 31835858 MSH5 6 G G T 47 PRPH2 5961 broad.mit.edu 36 6 42797500 42797500 + Missense_Mutation SNP T T C novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 42797500 42797500 PRPH2 6 T T C 57 TIAM2 26230 broad.mit.edu 36 6 155608487 155608487 + Silent SNP C C T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 155608487 155608487 TIAM2 6 C C T 19 POLD2 5425 broad.mit.edu 36 7 44128026 44128026 + Missense_Mutation SNP G G C novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 G C G G Unknown Valid Somatic x x Sequenom_PCR_WGA x Broad Missense_Mutation SNP 44128026 44128026 POLD2 7 G G C 42 ZNF479 90827 broad.mit.edu 36 7 57198322 57198322 + Missense_Mutation SNP C C T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 57198322 57198322 ZNF479 7 C C T 30 AKR1D1 6718 broad.mit.edu 36 7 137411867 137411867 + Silent SNP C C T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 137411867 137411867 AKR1D1 7 C C T 31 MGAM 8972 broad.mit.edu 36 7 141410781 141410781 + Missense_Mutation SNP C C A novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 C A C C Unknown Valid Somatic x x Sequenom_PCR_WGA x Broad Missense_Mutation SNP 141410781 141410781 MGAM 7 C C A 18 RALYL 138046 broad.mit.edu 36 8 85849431 85849431 + Missense_Mutation SNP T T C novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 85849431 85849431 RALYL 8 T T C 62 CPNE3 8895 broad.mit.edu 36 8 87629648 87629648 + Missense_Mutation SNP G G A novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 87629648 87629648 CPNE3 8 G G A 43 DOCK8 81704 broad.mit.edu 36 9 453545 453545 + Missense_Mutation SNP C C T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 C T C C Unknown Valid Somatic x x Sequenom_PCR_WGA x Broad Missense_Mutation SNP 453545 453545 DOCK8 9 C C T 27 LINGO2 158038 broad.mit.edu 36 9 27940233 27940233 + Missense_Mutation SNP T T C novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 27940233 27940233 LINGO2 9 T T C 58 FANCG 2189 broad.mit.edu 36 9 35065483 35065483 + Missense_Mutation SNP A A T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 A T A A Unknown Valid Somatic x x Sequenom_PCR_WGA x Broad Missense_Mutation SNP 35065483 35065483 FANCG 9 A A T 6 CTSL1 1514 broad.mit.edu 36 9 89532444 89532444 + Missense_Mutation SNP C C T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 89532444 89532444 CTSL1 9 C C T 25 CERCAM 51148 broad.mit.edu 36 9 130237816 130237816 + Silent SNP C C T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 130237816 130237816 CERCAM 9 C C T 31 NOTCH1 4851 broad.mit.edu 36 9 138530300 138530300 + Silent SNP G G T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 138530300 138530300 NOTCH1 9 G G T 47 MAGEB6 158809 broad.mit.edu 36 X 26122021 26122021 + Missense_Mutation SNP G G A novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 26122021 26122021 MAGEB6 23 G G A 38 GDPD2 54857 broad.mit.edu 36 X 69563727 69563727 + Missense_Mutation SNP A A C novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 69563727 69563727 GDPD2 23 A A C 6 CLDN2 9075 broad.mit.edu 36 X 106058281 106058281 + Missense_Mutation SNP C C A novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 106058281 106058281 CLDN2 23 C C A 17 STAG2 10735 broad.mit.edu 36 X 123006782 123006782 + Missense_Mutation SNP C C T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 123006782 123006782 STAG2 23 C C T 19 UTP14A 10813 broad.mit.edu 36 X 128882166 128882166 + Nonsense_Mutation SNP G G T novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 Unknown Unknown Unknown x x --- x Broad Nonsense_Mutation SNP 128882166 128882166 UTP14A 23 G G T 45 L1CAM 3897 broad.mit.edu 36 X 152783108 152783108 + Missense_Mutation SNP G G A novel Unknown TCGA-20-0990-01 TCGA-20-0990-10 G A G G Unknown Valid Somatic x x Sequenom_PCR_WGA x Broad Missense_Mutation SNP 152783108 152783108 L1CAM 23 G G A 41