Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
DEFB125	245938	genome.wustl.edu	36	20	24997	24997	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	24997	24997	DEFB125	20	C	C	T	32
SLC6A12	6539	genome.wustl.edu	36	12	184122	184122	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	184122	184122	SLC6A12	12	G	G	T	42
DMRT3	58524	genome.wustl.edu	36	9	980732	980732	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	980732	980732	DMRT3	9	C	C	A	26
ALLC	55821	genome.wustl.edu	36	2	3721230	3721231	+	Missense	DNP	GG	GG	TT	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	GG	GG	GG	TT	GG	GG	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense	DNP	3721230	3721231	ALLC	2	GG	GG	TT	47
C3	718	genome.wustl.edu	36	19	6635793	6635793	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	6635793	6635793	C3	19	G	G	T	44
TP53	7157	genome.wustl.edu	36	17	7517747	7517747	+	Nonsense_Mutation	SNP	G	A	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	A	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	7517747	7517747	TP53	17	G	A	A	38
ENSG00000219492		genome.wustl.edu	36	4	8998011	8998011	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	8998011	8998011	ENSG00000219492	4	T	T	A	50
PPP1R3B	79660	genome.wustl.edu	36	8	9035843	9035843	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	9035843	9035843	PPP1R3B	8	C	C	A	29
KLRC3	3823	genome.wustl.edu	36	12	10462249	10462249	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	10462249	10462249	KLRC3	12	G	G	A	36
AP1M2	10053	genome.wustl.edu	36	19	10550606	10550606	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	Sanger_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	10550606	10550606	AP1M2	19	C	C	G	29
EMR3	84658	genome.wustl.edu	36	19	14633798	14633798	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	14633798	14633798	EMR3	19	T	T	G	52
HIST4H4	121504	genome.wustl.edu	36	12	14815167	14815167	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	14815167	14815167	HIST4H4	12	C	C	T	31
BMX	660	genome.wustl.edu	36	X	15450513	15450513	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	15450513	15450513	BMX	23	A	A	C	7
KIF13A	63971	genome.wustl.edu	36	6	17896057	17896057	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	17896057	17896057	KIF13A	6	C	C	G	24
NAV2	89797	genome.wustl.edu	36	11	20075774	20075774	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	20075774	20075774	NAV2	11	G	G	C	33
RNASE2	6036	genome.wustl.edu	36	14	20493879	20493879	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	20493879	20493879	RNASE2	14	T	T	C	51
ENSG00000205203		genome.wustl.edu	36	17	21476661	21476661	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	A	A	A	C	A	C	Unknown	Valid	Germline	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	21476661	21476661	ENSG00000205203	17	A	A	C	16
LOC646864	646864	genome.wustl.edu	36	19	22832856	22832856	+	Silent	SNP	T	T	G	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	22832856	22832856	LOC646864	19	T	T	G	53
MYH6	4624	genome.wustl.edu	36	14	22926590	22926590	+	Silent	SNP	C	C	G	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	22926590	22926590	MYH6	14	C	C	G	21
KDM1A	23028	genome.wustl.edu	36	1	23229651	23229651	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	23229651	23229651	KDM1A	1	C	C	A	30
PARP4	143	genome.wustl.edu	36	13	23949839	23949839	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	23949839	23949839	PARP4	13	C	C	G	24
SUPT6H	6830	genome.wustl.edu	36	17	24024598	24024598	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	24024598	24024598	SUPT6H	17	G	G	A	45
KIAA1217	56243	genome.wustl.edu	36	10	24802221	24802221	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	24802221	24802221	KIAA1217	10	C	C	T	32
DOCK5	80005	genome.wustl.edu	36	8	25192019	25192019	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	25192019	25192019	DOCK5	8	T	T	C	52
HIST1H2BH	8345	genome.wustl.edu	36	6	26359889	26359889	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	26359889	26359889	HIST1H2BH	6	C	C	T	23
DEFB118	117285	genome.wustl.edu	36	20	29424371	29424371	+	Nonsense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	29424371	29424371	DEFB118	20	C	C	T	17
SEPT1	1731	genome.wustl.edu	36	16	30298346	30298346	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	30298346	30298346	SEPT1	16	G	G	C	35
PNMT	5409	genome.wustl.edu	36	17	35079886	35079886	+	Silent	SNP	A	A	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	35079886	35079886	PNMT	17	A	A	T	7
PIGO	84720	genome.wustl.edu	36	9	35081323	35081323	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	35081323	35081323	PIGO	9	C	C	T	27
KIAA1755	85449	genome.wustl.edu	36	20	36303062	36303062	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	36303062	36303062	KIAA1755	20	G	G	A	46
OSCP1	127700	genome.wustl.edu	36	1	36656411	36656411	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	36656411	36656411	OSCP1	1	G	G	C	45
PDZRN4	29951	genome.wustl.edu	36	12	40252756	40252756	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	40252756	40252756	PDZRN4	12	G	G	T	33
ZNF619	285267	genome.wustl.edu	36	3	40503387	40503387	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	40503387	40503387	ZNF619	3	G	G	A	43
KATNAL2	83473	genome.wustl.edu	36	18	42843400	42843400	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	42843400	42843400	KATNAL2	18	A	A	G	2
LARS2	23395	genome.wustl.edu	36	3	45493047	45493047	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	45493047	45493047	LARS2	3	C	C	T	32
ZBED4	9889	genome.wustl.edu	36	22	48665385	48665385	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	48665385	48665385	ZBED4	22	C	C	A	29
LOC283116	283116	genome.wustl.edu	36	11	49016060	49016060	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	49016060	49016060	LOC283116	11	T	T	C	56
USP19	10869	genome.wustl.edu	36	3	49128266	49128266	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	49128266	49128266	USP19	3	C	C	T	32
USP4	7375	genome.wustl.edu	36	3	49337406	49337406	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	49337406	49337406	USP4	3	T	T	G	52
ENSG00000205035		genome.wustl.edu	36	11	49554657	49554657	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	49554657	49554657	ENSG00000205035	11	T	T	A	49
ENSG00000205035		genome.wustl.edu	36	11	49554660	49554660	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	49554660	49554660	ENSG00000205035	11	G	G	A	35
CCNB3	85417	genome.wustl.edu	36	X	50068608	50068608	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	50068608	50068608	CCNB3	23	G	G	T	33
EFHC1	114327	genome.wustl.edu	36	6	52425561	52425561	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	52425561	52425561	EFHC1	6	T	T	A	50
ITIH4	3700	genome.wustl.edu	36	3	52838274	52838274	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	52838274	52838274	ITIH4	3	G	G	T	40
OR5AK3P		genome.wustl.edu	36	11	56495401	56495401	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	56495401	56495401	OR5AK3P	11	T	T	C	52
ZNF677	342926	genome.wustl.edu	36	19	58432476	58432476	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	58432476	58432476	ZNF677	19	G	G	T	34
ZIM2	23619	genome.wustl.edu	36	19	61977939	61977939	+	Nonsense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	61977939	61977939	ZIM2	19	G	G	A	39
PEG3	5178	genome.wustl.edu	36	19	62017244	62017244	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	62017244	62017244	PEG3	19	C	C	T	32
CACHD1	57685	genome.wustl.edu	36	1	64902807	64902807	+	Silent	SNP	C	C	G	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	64902807	64902807	CACHD1	1	C	C	G	29
GPHN	10243	genome.wustl.edu	36	14	66595242	66595242	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	66595242	66595242	GPHN	14	T	T	A	50
NFAT5	10725	genome.wustl.edu	36	16	68159941	68159941	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	68159941	68159941	NFAT5	16	G	G	A	41
UGT2A3	79799	genome.wustl.edu	36	4	69851681	69851681	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	69851681	69851681	UGT2A3	4	G	G	C	33
RAB37	326624	genome.wustl.edu	36	17	70253088	70253088	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	Sanger_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	70253088	70253088	RAB37	17	G	G	T	33
KIAA1279	26128	genome.wustl.edu	36	10	70446172	70446172	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	70446172	70446172	KIAA1279	10	G	G	A	45
NPFFR2	10886	genome.wustl.edu	36	4	73232187	73232187	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	73232187	73232187	NPFFR2	4	T	T	C	55
PNMA1	9240	genome.wustl.edu	36	14	73249466	73249466	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	73249466	73249466	PNMA1	14	G	G	A	39
GTF2IRD2B	389524	genome.wustl.edu	36	7	74201689	74201689	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	74201689	74201689	GTF2IRD2B	7	G	G	A	40
GCNT4	51301	genome.wustl.edu	36	5	74360756	74360756	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	74360756	74360756	GCNT4	5	G	G	C	41
BATF	10538	genome.wustl.edu	36	14	75061284	75061284	+	Silent	SNP	G	G	C	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	75061284	75061284	BATF	14	G	G	C	47
ZZZ3	26009	genome.wustl.edu	36	1	77817877	77817877	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	77817877	77817877	ZZZ3	1	T	T	C	63
SH3BGRL	6451	genome.wustl.edu	36	X	80419192	80419192	+	Silent	SNP	A	G	G	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	A	A	G	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	80419192	80419192	SH3BGRL	23	A	G	G	12
PCLO	27445	genome.wustl.edu	36	7	82602493	82602493	+	Nonsense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	82602493	82602493	PCLO	7	G	G	T	45
PCLO	27445	genome.wustl.edu	36	7	82622189	82622189	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	Sanger_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	82622189	82622189	PCLO	7	C	C	T	28
DLG2	1740	genome.wustl.edu	36	11	83175364	83175364	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	83175364	83175364	DLG2	11	T	T	C	60
MCOLN2	255231	genome.wustl.edu	36	1	85194704	85194704	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	85194704	85194704	MCOLN2	1	A	A	G	11
ABCB4	5244	genome.wustl.edu	36	7	86906923	86906923	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	86906923	86906923	ABCB4	7	T	T	C	50
LRRC8D	55144	genome.wustl.edu	36	1	90172643	90172643	+	Silent	SNP	G	G	C	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	90172643	90172643	LRRC8D	1	G	G	C	48
RPS6KA5	9252	genome.wustl.edu	36	14	90456321	90456321	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	90456321	90456321	RPS6KA5	14	G	G	C	41
SECISBP2	79048	genome.wustl.edu	36	9	91133588	91133588	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	91133588	91133588	SECISBP2	9	A	A	G	11
FAT3	120114	genome.wustl.edu	36	11	91725225	91725225	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	91725225	91725225	FAT3	11	C	C	T	25
MRPL42	28977	genome.wustl.edu	36	12	92405446	92405446	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	92405446	92405446	MRPL42	12	C	C	G	17
HIATL1	84641	genome.wustl.edu	36	9	96240563	96240563	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	96240563	96240563	HIATL1	9	G	G	A	41
TSPAN6	7105	genome.wustl.edu	36	X	99775091	99775091	+	Silent	SNP	A	A	C	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	99775091	99775091	TSPAN6	23	A	A	C	11
VPS13B	157680	genome.wustl.edu	36	8	100356530	100356530	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	100356530	100356530	VPS13B	8	C	C	A	32
TBC1D8	11138	genome.wustl.edu	36	2	101073171	101073171	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	101073171	101073171	TBC1D8	2	T	T	C	55
RNF149	284996	genome.wustl.edu	36	2	101278050	101278050	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	101278050	101278050	RNF149	2	C	C	T	29
NRK	203447	genome.wustl.edu	36	X	105019014	105019014	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	105019014	105019014	NRK	23	C	C	T	24
TMEM116	89894	genome.wustl.edu	36	12	110856111	110856111	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	110856111	110856111	TMEM116	12	C	C	G	27
PALM2-AKAP2	445815	genome.wustl.edu	36	9	111727169	111727169	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	111727169	111727169	PALM2-AKAP2	9	C	C	A	30
CD200R1L	344807	genome.wustl.edu	36	3	114028930	114028930	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	114028930	114028930	CD200R1L	3	T	T	C	51
C10orf84	63877	genome.wustl.edu	36	10	120075697	120075697	+	Nonsense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	120075697	120075697	C10orf84	10	C	C	A	29
HSPA5	3309	genome.wustl.edu	36	9	127040895	127040895	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	127040895	127040895	HSPA5	9	C	C	A	32
THEMIS	387357	genome.wustl.edu	36	6	128263714	128263714	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	128263714	128263714	THEMIS	6	C	C	A	22
NFRKB	4798	genome.wustl.edu	36	11	129244766	129244766	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	129244766	129244766	NFRKB	11	C	C	G	21
POTEF	728378	genome.wustl.edu	36	2	130549240	130549240	+	Nonsense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	130549240	130549240	POTEF	2	G	G	A	47
LOC653781	653781	genome.wustl.edu	36	2	131095591	131095591	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	131095591	131095591	LOC653781	2	C	C	A	29
TRPC7	57113	genome.wustl.edu	36	5	135720346	135720346	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	135720346	135720346	TRPC7	5	T	T	A	58
PCDHGC4	56098	genome.wustl.edu	36	5	140845157	140845157	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	140845157	140845157	PCDHGC4	5	A	A	T	12
DENND3	22898	genome.wustl.edu	36	8	142245538	142245538	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	142245538	142245538	DENND3	8	C	C	T	25
FBXO38	81545	genome.wustl.edu	36	5	147800984	147800984	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	147800984	147800984	FBXO38	5	G	G	A	37
KIF4B	285643	genome.wustl.edu	36	5	154374310	154374310	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	154374310	154374310	KIF4B	5	G	G	A	38
CYFIP2	26999	genome.wustl.edu	36	5	156700682	156700682	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	156700682	156700682	CYFIP2	5	C	C	G	18
NUF2	83540	genome.wustl.edu	36	1	161564699	161564699	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	161564699	161564699	NUF2	1	A	A	C	7
DOCK2	1794	genome.wustl.edu	36	5	169368078	169368078	+	Splice_Site_SNP	SNP	G	G	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Splice_Site_SNP	SNP	169368078	169368078	DOCK2	5	G	G	T	34
TCTEX1D2	255758	genome.wustl.edu	36	3	197502604	197502604	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	197502604	197502604	TCTEX1D2	3	G	G	C	33
TNS1	7145	genome.wustl.edu	36	2	218458127	218458127	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	218458127	218458127	TNS1	2	C	C	A	20
SNAP47	116841	genome.wustl.edu	36	1	226013795	226013795	+	Nonsense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	226013795	226013795	SNAP47	1	C	C	G	29
SLC35F3	148641	genome.wustl.edu	36	1	232433917	232433917	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	232433917	232433917	SLC35F3	1	G	G	A	40
USP40	55230	genome.wustl.edu	36	2	234096600	234096600	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	234096600	234096600	USP40	2	C	C	G	32
KIF26B	55083	genome.wustl.edu	36	1	243770770	243770770	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	243770770	243770770	KIF26B	1	C	C	T	32
MAP3K15	389840	genome.wustl.edu	36	X	19290830	19290831	+	Frame_Shift_Del	DEL	AG	AG	-	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	AG	AG					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Frame_Shift_Del	DEL	19290830	19290831	MAP3K15	23	AG	AG	-	15
KLHDC7A	127707	genome.wustl.edu	36	1	18680136	18680136	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	18680136	18680136	KLHDC7A	1	C	C	G	26
PIGV	55650	genome.wustl.edu	36	1	26993844	26993844	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	26993844	26993844	PIGV	1	G	G	T	39
DMBX1	127343	genome.wustl.edu	36	1	46750477	46750477	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	46750477	46750477	DMBX1	1	G	G	A	39
ADD3	120	genome.wustl.edu	36	10	111882060	111882060	+	Missense_Mutation	SNP	G	G	C		Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	C	G	G	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	111882060	111882060	ADD3	10	G	G	C	34
LIPJ	142910	genome.wustl.edu	36	10	90356418	90356418	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	90356418	90356418	LIPJ	10	C	C	A	32
LOC653226	653226	genome.wustl.edu	36	10	93556982	93556982	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	93556982	93556982	LOC653226	10	G	G	T	41
CD3D	915	genome.wustl.edu	36	11	117716412	117716412	+	Silent	SNP	G	G	A		Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	A	G	G	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	117716412	117716412	CD3D	11	G	G	A	48
KBTBD4	55709	genome.wustl.edu	36	11	47553810	47553810	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	47553810	47553810	KBTBD4	11	G	G	T	45
GLYATL1	92292	genome.wustl.edu	36	11	58467706	58467706	+	Silent	SNP	A	A	C	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	58467706	58467706	GLYATL1	11	A	A	C	11
ENSG00000180574		genome.wustl.edu	36	12	10550232	10550232	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	10550232	10550232	ENSG00000180574	12	C	C	G	28
SSH1	54434	genome.wustl.edu	36	12	107770579	107770579	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	107770579	107770579	SSH1	12	T	T	C	54
CES3	23491	genome.wustl.edu	36	16	65555855	65555855	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	65555855	65555855	CES3	16	G	G	T	45
PRODH2	58510	genome.wustl.edu	36	19	40982818	40982818	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	40982818	40982818	PRODH2	19	G	G	A	38
XRCC1	7515	genome.wustl.edu	36	19	48748875	48748875	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	48748875	48748875	XRCC1	19	C	C	G	24
ITGA4	3676	genome.wustl.edu	36	2	182068837	182068837	+	Nonsense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	182068837	182068837	ITGA4	2	G	G	T	47
PASK	23178	genome.wustl.edu	36	2	241725336	241725336	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	241725336	241725336	PASK	2	C	C	T	24
ITPR1	3708	genome.wustl.edu	36	3	4689842	4689842	+	Silent	SNP	A	A	C	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	4689842	4689842	ITPR1	3	A	A	C	11
DCAF16	54876	genome.wustl.edu	36	4	17414271	17414271	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	17414271	17414271	DCAF16	4	T	T	C	57
C4orf23	152992	genome.wustl.edu	36	4	8516628	8516628	+	Missense_Mutation	SNP	C	C	T		Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	T	C	C	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	8516628	8516628	C4orf23	4	C	C	T	22
C6	729	genome.wustl.edu	36	5	41195071	41195071	+	Missense_Mutation	SNP	T	T	G		Unknown	TCGA-13-1488-01	TCGA-13-1488-10	T	T	T	G	T	T	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	41195071	41195071	C6	5	T	T	G	57
ZNF800	168850	genome.wustl.edu	36	7	126801698	126801698	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	126801698	126801698	ZNF800	7	G	G	A	45
ZNF716	441234	genome.wustl.edu	36	7	57533681	57533681	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	57533681	57533681	ZNF716	7	C	C	A	26
NAT2	10	genome.wustl.edu	36	8	18302467	18302467	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	18302467	18302467	NAT2	8	T	T	C	63
ADRA1A	148	genome.wustl.edu	36	8	26777636	26777636	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	26777636	26777636	ADRA1A	8	G	G	C	36
ZFHX4	79776	genome.wustl.edu	36	8	77930712	77930712	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-1488-01	TCGA-13-1488-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	77930712	77930712	ZFHX4	8	C	C	T	27
ARHGAP33	115703	genome.wustl.edu	36	19	40969697	40969697	+	Missense_Mutation	SNP	G	G	A		Unknown	TCGA-13-1488-01	TCGA-13-1488-10	G	G	G	A	G	G	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	40969697	40969697	ARHGAP33	19	G	G	A	39