Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer dataset type classification start end gene chr ref_allele tum_allele1 tum_allele2 context TP53 7157 genome.wustl.edu 36 17 7517853 7517853 + Missense_Mutation SNP A A C novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 7517853 7517853 TP53 17 A A C 5 FASTKD3 79072 genome.wustl.edu 36 5 7920093 7920093 + Silent SNP A A G novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 7920093 7920093 FASTKD3 5 A A G 7 MUC16 94025 genome.wustl.edu 36 19 8950509 8950509 + Missense_Mutation SNP A A T novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 8950509 8950509 MUC16 19 A A T 2 DCLRE1C 64421 genome.wustl.edu 36 10 15016413 15016413 + Missense_Mutation SNP G G T novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 15016413 15016413 DCLRE1C 10 G G T 44 UNC13A 23025 genome.wustl.edu 36 19 17646509 17646509 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 17646509 17646509 UNC13A 19 C C T 27 LAMA3 3909 genome.wustl.edu 36 18 19765088 19765088 + Missense_Mutation SNP G G T novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 19765088 19765088 LAMA3 18 G G T 34 WDR35 57539 genome.wustl.edu 36 2 20017094 20017094 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 20017094 20017094 WDR35 2 C C T 31 RNASE12 493901 genome.wustl.edu 36 14 20128389 20128389 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 20128389 20128389 RNASE12 14 C C T 29 DNAH3 55567 genome.wustl.edu 36 16 20888760 20888761 + Missense_Mutation DNP TA TA CT novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 TA TA Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation DNP 20888760 20888761 DNAH3 16 TA TA CT 53 APOB 338 genome.wustl.edu 36 2 21082364 21082364 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 21082364 21082364 APOB 2 C C G 32 DNMT3A 1788 genome.wustl.edu 36 2 25323031 25323031 + Missense_Mutation SNP A A G novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 25323031 25323031 DNMT3A 2 A A G 9 MOG 4340 genome.wustl.edu 36 6 29746141 29746141 + Nonsense_Mutation SNP C C T novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 29746141 29746141 MOG 6 C C T 31 SVIL 6840 genome.wustl.edu 36 10 29817606 29817606 + Silent SNP G G C novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 29817606 29817606 SVIL 10 G G C 45 NBEA 26960 genome.wustl.edu 36 13 35022684 35022684 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 35022684 35022684 NBEA 13 G G C 40 UGT3A1 133688 genome.wustl.edu 36 5 35990268 35990268 + Silent SNP C C A novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 35990268 35990268 UGT3A1 5 C C A 21 NIPBL 25836 genome.wustl.edu 36 5 37056376 37056376 + Missense_Mutation SNP A A G novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 37056376 37056376 NIPBL 5 A A G 1 TTC25 83538 genome.wustl.edu 36 17 37348883 37348883 + Silent SNP G G A novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 37348883 37348883 TTC25 17 G G A 33 MGA 23269 genome.wustl.edu 36 15 39776435 39776435 + Missense_Mutation SNP C C A novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 39776435 39776435 MGA 15 C C A 26 CASK 8573 genome.wustl.edu 36 X 41331178 41331178 + Nonsense_Mutation SNP C C A novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 41331178 41331178 CASK 23 C C A 30 TESK2 10420 genome.wustl.edu 36 1 45660000 45660000 + Missense_Mutation SNP G G A novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 45660000 45660000 TESK2 1 G G A 47 GDF2 2658 genome.wustl.edu 36 10 48036458 48036458 + Missense_Mutation SNP G G A novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 48036458 48036458 GDF2 10 G G A 44 GDF2 2658 genome.wustl.edu 36 10 48036475 48036475 + Silent SNP G G C novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 48036475 48036475 GDF2 10 G G C 41 PSG7 5676 genome.wustl.edu 36 19 48121803 48121803 + Missense_Mutation SNP C C A novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 48121803 48121803 PSG7 19 C C A 26 FSHR 2492 genome.wustl.edu 36 2 49043568 49043568 + Missense_Mutation SNP G G T novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 49043568 49043568 FSHR 2 G G T 36 PKHD1 5314 genome.wustl.edu 36 6 52017815 52017815 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 52017815 52017815 PKHD1 6 G G C 41 CBLN4 140689 genome.wustl.edu 36 20 54012484 54012484 + Missense_Mutation SNP C C A novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 54012484 54012484 CBLN4 20 C C A 30 PAGE2 203569 genome.wustl.edu 36 X 55134516 55134516 + Nonsense_Mutation SNP G G T novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 55134516 55134516 PAGE2 23 G G T 41 SIGLEC6 946 genome.wustl.edu 36 19 56722855 56722855 + Silent SNP T T C novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 56722855 56722855 SIGLEC6 19 T T C 64 DIDO1 11083 genome.wustl.edu 36 20 60998403 60998403 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 60998403 60998403 DIDO1 20 C C T 20 AHNAK 79026 genome.wustl.edu 36 11 62050359 62050359 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 62050359 62050359 AHNAK 11 G G C 45 ZNF264 9422 genome.wustl.edu 36 19 62414536 62414536 + Missense_Mutation SNP G G A novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 62414536 62414536 ZNF264 19 G G A 37 CCDC88B 283234 genome.wustl.edu 36 11 63877766 63877766 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 63877766 63877766 CCDC88B 11 C C G 18 RBM14 10432 genome.wustl.edu 36 11 66148264 66148264 + Missense_Mutation SNP A A G novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 66148264 66148264 RBM14 11 A A G 14 RBM14 10432 genome.wustl.edu 36 11 66150529 66150529 + Missense_Mutation SNP A A C novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 66150529 66150529 RBM14 11 A A C 15 VCPIP1 80124 genome.wustl.edu 36 8 67739740 67739740 + Missense_Mutation SNP C C A novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 67739740 67739740 VCPIP1 8 C C A 21 CPA6 57094 genome.wustl.edu 36 8 68558631 68558631 + Missense_Mutation SNP T T A novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 68558631 68558631 CPA6 8 T T A 64 KIAA0247 9766 genome.wustl.edu 36 14 69247448 69247448 + Silent SNP G G A novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 69247448 69247448 KIAA0247 14 G G A 45 NCOA2 10499 genome.wustl.edu 36 8 71203286 71203286 + Missense_Mutation SNP A A C novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 71203286 71203286 NCOA2 8 A A C 3 DQX1 165545 genome.wustl.edu 36 2 74600293 74600293 + Missense_Mutation SNP T T A novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 74600293 74600293 DQX1 2 T T A 60 ESRRB 2103 genome.wustl.edu 36 14 75975583 75975583 + Missense_Mutation SNP T T C novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 75975583 75975583 ESRRB 14 T T C 64 HGF 3082 genome.wustl.edu 36 7 81174600 81174600 + Nonsense_Mutation SNP C C A novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 81174600 81174600 HGF 7 C C A 23 CACNA2D1 781 genome.wustl.edu 36 7 81437180 81437180 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 81437180 81437180 CACNA2D1 7 C C G 24 KLHL25 64410 genome.wustl.edu 36 15 84112344 84112344 + Missense_Mutation SNP T T C novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 84112344 84112344 KLHL25 15 T T C 51 TMEM126A 84233 genome.wustl.edu 36 11 85042847 85042847 + Missense_Mutation SNP T T C novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 85042847 85042847 TMEM126A 11 T T C 59 SMARCAD1 56916 genome.wustl.edu 36 4 95374277 95374277 + Missense_Mutation SNP G G A novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 95374277 95374277 SMARCAD1 4 G G A 36 SLIT1 6585 genome.wustl.edu 36 10 98763798 98763798 + Missense_Mutation SNP T T A novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 98763798 98763798 SLIT1 10 T T A 60 PMPCB 9512 genome.wustl.edu 36 7 102735387 102735387 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 102735387 102735387 PMPCB 7 G G C 36 CASP5 838 genome.wustl.edu 36 11 104378115 104378115 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 104378115 104378115 CASP5 11 C C G 24 MYH15 22989 genome.wustl.edu 36 3 109612336 109612336 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 109612336 109612336 MYH15 3 C C T 18 ZC3H6 376940 genome.wustl.edu 36 2 112790617 112790617 + Missense_Mutation SNP G G A novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 112790617 112790617 ZC3H6 2 G G A 41 CSMD3 114788 genome.wustl.edu 36 8 113433840 113433840 + Missense_Mutation SNP T T C novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 113433840 113433840 CSMD3 8 T T C 50 SC5DL 6309 genome.wustl.edu 36 11 120682321 120682321 + Silent SNP C C T novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 120682321 120682321 SC5DL 11 C C T 31 ADAM12 8038 genome.wustl.edu 36 10 128009048 128009048 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 128009048 128009048 ADAM12 10 C C T 24 C10orf90 118611 genome.wustl.edu 36 10 128104618 128104619 + Missense DNP TC TC AA novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 TC TC Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense DNP 128104618 128104619 C10orf90 10 TC TC AA 62 GSDMC 56169 genome.wustl.edu 36 8 130829959 130829959 + Silent SNP G G C novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 130829959 130829959 GSDMC 8 G G C 33 KHDRBS3 10656 genome.wustl.edu 36 8 136688425 136688425 + Missense_Mutation SNP G G A novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 136688425 136688425 KHDRBS3 8 G G A 45 SPINK6 404203 genome.wustl.edu 36 5 147573674 147573674 + Silent SNP T T C novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 147573674 147573674 SPINK6 5 T T C 59 HPS3 84343 genome.wustl.edu 36 3 150360617 150360617 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 150360617 150360617 HPS3 3 C C T 24 FLG 2312 genome.wustl.edu 36 1 150547933 150547933 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 150547933 150547933 FLG 1 C C T 32 ARHGEF11 9826 genome.wustl.edu 36 1 155176012 155176012 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 155176012 155176012 ARHGEF11 1 C C T 32 GMPS 8833 genome.wustl.edu 36 3 157136889 157136889 + Nonsense_Mutation SNP C C T novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 157136889 157136889 GMPS 3 C C T 29 CCDC148 130940 genome.wustl.edu 36 2 158878516 158878516 + Missense_Mutation SNP A A T novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 158878516 158878516 CCDC148 2 A A T 1 PRG4 10216 genome.wustl.edu 36 1 184543029 184543029 + Missense_Mutation SNP C C A novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 C C C A C A Unknown Valid Germline 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 184543029 184543029 PRG4 1 C C A 30 RGS18 64407 genome.wustl.edu 36 1 190395038 190395038 + Missense_Mutation SNP G G A novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 190395038 190395038 RGS18 1 G G A 38 IKBKE 9641 genome.wustl.edu 36 1 204719852 204719852 + Silent SNP C C T novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 204719852 204719852 IKBKE 1 C C T 21 OR4K2 390431 genome.wustl.edu 36 14 19415193 19415193 + Missense_Mutation SNP T T A novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 19415193 19415193 OR4K2 14 T T A 49 CDRT1 374286 genome.wustl.edu 36 17 15442644 15442644 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0924-01 TCGA-13-0924-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 15442644 15442644 CDRT1 17 G G C 44 PAH 5053 genome.wustl.edu 36 12 101812699 101812706 + Frame_Shift_Del DEL CTCAAGAT CTCAAGAT - Unknown TCGA-13-0924-01 TCGA-13-0924-10 CTCAAGAT CTCAAGAT CTCAAGAT - CTCAAGAT CTCAAGAT Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Frame_Shift_Del DEL 101812699 101812706 PAH 12 CTCAAGAT CTCAAGAT - 24 KRT71 112802 genome.wustl.edu 36 12 51228750 51228763 + Splice_Site_Del DEL ACGGCTTCAAAGAG ACGGCTTCAAAGAG - Unknown TCGA-13-0924-01 TCGA-13-0924-10 ACGGCTTCAAAGAG ACGGCTTCAAAGAG ACGGCTTCAAAGAG - ACGGCTTCAAAGAG ACGGCTTCAAAGAG Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Splice_Site_Del DEL 51228750 51228763 KRT71 12 ACGGCTTCAAAGAG ACGGCTTCAAAGAG - 14