Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer dataset type classification start end gene chr ref_allele tum_allele1 tum_allele2 context HTT 3064 genome.wustl.edu 36 4 3146600 3146600 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 3146600 3146600 HTT 4 C C G 19 RGS12 6002 genome.wustl.edu 36 4 3289212 3289212 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 3289212 3289212 RGS12 4 C C G 32 ZBTB49 166793 genome.wustl.edu 36 4 4355335 4355335 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 4355335 4355335 ZBTB49 4 G G C 33 RNF216 54476 genome.wustl.edu 36 7 5747471 5747471 + Missense_Mutation SNP A A C novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 5747471 5747471 RNF216 7 A A C 3 TP53 7157 genome.wustl.edu 36 17 7520114 7520114 + Nonsense_Mutation SNP G A A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G A A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 7520114 7520114 TP53 17 G A A 47 DNAH2 146754 genome.wustl.edu 36 17 7603513 7603513 + Missense_Mutation SNP G G A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 7603513 7603513 DNAH2 17 G G A 41 C4orf23 152992 genome.wustl.edu 36 4 8516718 8516718 + Missense_Mutation SNP G G T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 8516718 8516718 C4orf23 4 G G T 35 UBE4B 10277 genome.wustl.edu 36 1 10161345 10161345 + Silent SNP G G C novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 10161345 10161345 UBE4B 1 G G C 41 LRP6 4040 genome.wustl.edu 36 12 12165331 12165331 + Missense_Mutation SNP G G T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 12165331 12165331 LRP6 12 G G T 41 uc002goi.1 genome.wustl.edu 36 17 14623918 14623918 + Nonsense_Mutation SNP A A T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 14623918 14623918 uc002goi.1 17 A A T 6 ARHGEF19 128272 genome.wustl.edu 36 1 16397715 16397715 + Missense_Mutation SNP T T G novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 T T T G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 16397715 16397715 ARHGEF19 1 T T G 56 BNC2 54796 genome.wustl.edu 36 9 16427047 16427047 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 16427047 16427047 BNC2 9 G G C 43 PRPS1L1 221823 genome.wustl.edu 36 7 18033759 18033759 + Missense_Mutation SNP T T C novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 18033759 18033759 PRPS1L1 7 T T C 54 BEND2 139105 genome.wustl.edu 36 X 18144655 18144655 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 18144655 18144655 BEND2 23 C C T 17 CDKAL1 54901 genome.wustl.edu 36 6 20954307 20954307 + Missense_Mutation SNP T T A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 20954307 20954307 CDKAL1 6 T T A 55 MYH7 4625 genome.wustl.edu 36 14 22957352 22957352 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 22957352 22957352 MYH7 14 C C T 27 PALB2 79728 genome.wustl.edu 36 16 23553821 23553821 + Missense_Mutation SNP C C A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 23553821 23553821 PALB2 16 C C A 32 TDP2 51567 genome.wustl.edu 36 6 24774777 24774777 + Missense_Mutation SNP G G T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 24774777 24774777 TDP2 6 G G T 38 ANAPC4 29945 genome.wustl.edu 36 4 25026255 25026255 + Silent SNP A A G novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 25026255 25026255 ANAPC4 4 A A G 9 NFE2L3 9603 genome.wustl.edu 36 7 26190738 26190738 + Missense_Mutation SNP G G T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 26190738 26190738 NFE2L3 7 G G T 34 MAPRE3 22924 genome.wustl.edu 36 2 27098614 27098614 + Silent SNP A A G novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 27098614 27098614 MAPRE3 2 A A G 8 DSG1 1828 genome.wustl.edu 36 18 27168027 27168027 + Missense_Mutation SNP T T A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 27168027 27168027 DSG1 18 T T A 52 CHRNA2 1135 genome.wustl.edu 36 8 27383308 27383308 + Missense_Mutation SNP G G A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 27383308 27383308 CHRNA2 8 G G A 39 DCAF8L1 139425 genome.wustl.edu 36 X 27908187 27908187 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 27908187 27908187 DCAF8L1 23 C C T 19 SF3A1 10291 genome.wustl.edu 36 22 29072390 29072390 + Nonsense_Mutation SNP T T A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 29072390 29072390 SF3A1 22 T T A 63 OR2J1 genome.wustl.edu 36 6 29177624 29177624 + Missense_Mutation SNP A A T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 29177624 29177624 OR2J1 6 A A T 9 OR2J3 442186 genome.wustl.edu 36 6 29187850 29187850 + Missense_Mutation SNP C C A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C A C A Unknown Valid Germline 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 29187850 29187850 OR2J3 6 C C A 18 SEZ6L2 26470 genome.wustl.edu 36 16 29816744 29816744 + Missense_Mutation SNP A T T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 A A T T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 29816744 29816744 SEZ6L2 16 A T T 11 TRIM39 56658 genome.wustl.edu 36 6 30417764 30417764 + Missense_Mutation SNP G G A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 30417764 30417764 TRIM39 6 G G A 47 C6orf134 79969 genome.wustl.edu 36 6 30718541 30718541 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 30718541 30718541 C6orf134 6 G G C 41 GALNT14 79623 genome.wustl.edu 36 2 31069305 31069305 + Missense_Mutation SNP G G A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 31069305 31069305 GALNT14 2 G G A 38 C16orf58 64755 genome.wustl.edu 36 16 31412598 31412598 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 31412598 31412598 C16orf58 16 C C T 30 PGAP3 93210 genome.wustl.edu 36 17 35082638 35082638 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 35082638 35082638 PGAP3 17 C C T 30 G6PC 2538 genome.wustl.edu 36 17 38316805 38316805 + Missense_Mutation SNP G G A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 38316805 38316805 G6PC 17 G G A 40 ENTHD1 150350 genome.wustl.edu 36 22 38613618 38613618 + Silent SNP G G A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 38613618 38613618 ENTHD1 22 G G A 40 DNAJB7 150353 genome.wustl.edu 36 22 39587615 39587615 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 39587615 39587615 DNAJB7 22 G G C 36 PRPH2 5961 genome.wustl.edu 36 6 42780284 42780284 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 42780284 42780284 PRPH2 6 C C T 19 ABCC10 89845 genome.wustl.edu 36 6 43524900 43524900 + Missense_Mutation SNP G G T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 43524900 43524900 ABCC10 6 G G T 42 RYR1 6261 genome.wustl.edu 36 19 43743775 43743775 + Missense_Mutation SNP T T G novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 43743775 43743775 RYR1 19 T T G 51 SLC35B2 347734 genome.wustl.edu 36 6 44332572 44332572 + Silent SNP C C T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 44332572 44332572 SLC35B2 6 C C T 21 GABRG1 2565 genome.wustl.edu 36 4 45755114 45755114 + Missense_Mutation SNP C C A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C A C A Unknown Valid Germline 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 45755114 45755114 GABRG1 4 C C A 29 GYLTL1B 120071 genome.wustl.edu 36 11 45904852 45904852 + Silent SNP G G A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 45904852 45904852 GYLTL1B 11 G G A 47 RTP3 83597 genome.wustl.edu 36 3 46517224 46517224 + Missense_Mutation SNP C C A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 46517224 46517224 RTP3 3 C C A 21 TFAP2D 83741 genome.wustl.edu 36 6 50848417 50848417 + Missense_Mutation SNP A A T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 50848417 50848417 TFAP2D 6 A A T 14 PKHD1 5314 genome.wustl.edu 36 6 51998397 51998397 + Silent SNP C C A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 51998397 51998397 PKHD1 6 C C A 30 FTO 79068 genome.wustl.edu 36 16 52417890 52417890 + Missense_Mutation SNP G G T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 52417890 52417890 FTO 16 G G T 36 ITGA5 3678 genome.wustl.edu 36 12 53081716 53081716 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 53081716 53081716 ITGA5 12 G G C 46 CASS4 57091 genome.wustl.edu 36 20 54460399 54460399 + Missense_Mutation SNP A A T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 54460399 54460399 CASS4 20 A A T 7 OR5I1 10798 genome.wustl.edu 36 11 55460276 55460276 + Silent SNP G G A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 55460276 55460276 OR5I1 11 G G A 43 OR10AG1 282770 genome.wustl.edu 36 11 55491934 55491934 + Silent SNP C C T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 55491934 55491934 OR10AG1 11 C C T 23 NAB2 4665 genome.wustl.edu 36 12 55771786 55771786 + Missense_Mutation SNP G G A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 55771786 55771786 NAB2 12 G G A 44 CLOCK 9575 genome.wustl.edu 36 4 56004807 56004807 + Missense_Mutation SNP T T A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 56004807 56004807 CLOCK 4 T T A 63 INTS2 57508 genome.wustl.edu 36 17 57301941 57301941 + Missense_Mutation SNP C C A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 57301941 57301941 INTS2 17 C C A 17 CDH8 1006 genome.wustl.edu 36 16 60612766 60612766 + Missense_Mutation SNP G G T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 60612766 60612766 CDH8 16 G G T 41 YTHDF1 54915 genome.wustl.edu 36 20 61305139 61305139 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 61305139 61305139 YTHDF1 20 C C T 19 ZSCAN5B 342933 genome.wustl.edu 36 19 61395871 61395871 + Silent SNP A A G novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 61395871 61395871 ZSCAN5B 19 A A G 16 AHNAK 79026 genome.wustl.edu 36 11 62041703 62041703 + Missense_Mutation SNP A A C novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 62041703 62041703 AHNAK 11 A A C 1 PTPRG 5793 genome.wustl.edu 36 3 62223519 62223519 + Missense_Mutation SNP C C A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 62223519 62223519 PTPRG 3 C C A 21 SF3B2 10992 genome.wustl.edu 36 11 65585750 65585750 + Silent SNP A A G novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 65585750 65585750 SF3B2 11 A A G 6 EPHA5 2044 genome.wustl.edu 36 4 65925337 65925337 + Silent SNP G G A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 65925337 65925337 EPHA5 4 G G A 38 CSPP1 79848 genome.wustl.edu 36 8 68170433 68170433 + Missense_Mutation SNP G G T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 68170433 68170433 CSPP1 8 G G T 33 C8orf34 116328 genome.wustl.edu 36 8 69514291 69514291 + Silent SNP T T C novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 69514291 69514291 C8orf34 8 T T C 52 KIF19 124602 genome.wustl.edu 36 17 69858655 69858655 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 69858655 69858655 KIF19 17 G G C 43 HTN3 3347 genome.wustl.edu 36 4 70931083 70931083 + Missense_Mutation SNP A A T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 70931083 70931083 HTN3 4 A A T 8 CYP1A1 1543 genome.wustl.edu 36 15 72799903 72799903 + Missense_Mutation SNP G G T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 72799903 72799903 CYP1A1 15 G G T 47 ALB 213 genome.wustl.edu 36 4 74494978 74494978 + Missense_Mutation SNP C C A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 74494978 74494978 ALB 4 C C A 28 EIF4A3 9775 genome.wustl.edu 36 17 75724488 75724488 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 75724488 75724488 EIF4A3 17 C C G 26 SLAIN1 122060 genome.wustl.edu 36 13 77216405 77216405 + Silent SNP C C T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 77216405 77216405 SLAIN1 13 C C T 30 ZSCAN2 54993 genome.wustl.edu 36 15 82964862 82964862 + Silent SNP G G C novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 82964862 82964862 ZSCAN2 15 G G C 43 SCD5 79966 genome.wustl.edu 36 4 83845532 83845532 + Nonsense_Mutation SNP C C T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 83845532 83845532 SCD5 4 C C T 30 ZNF711 7552 genome.wustl.edu 36 X 84412933 84412933 + Missense_Mutation SNP C C A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 84412933 84412933 ZNF711 23 C C A 28 IRF8 3394 genome.wustl.edu 36 16 84502761 84502761 + Missense_Mutation SNP A A G novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 A A Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 84502761 84502761 IRF8 16 A A G 3 FLRT2 23768 genome.wustl.edu 36 14 85159438 85159438 + Silent SNP C C T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 85159438 85159438 FLRT2 14 C C T 31 PTPN13 5783 genome.wustl.edu 36 4 87949965 87949965 + Missense_Mutation SNP T T C novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 87949965 87949965 PTPN13 4 T T C 52 CNNM4 26504 genome.wustl.edu 36 2 96791179 96791179 + Missense_Mutation SNP G G T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 96791179 96791179 CNNM4 2 G G T 42 CNGA3 1261 genome.wustl.edu 36 2 98379840 98379840 + Missense_Mutation SNP C C A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 98379840 98379840 CNGA3 2 C C A 22 ZKSCAN1 7586 genome.wustl.edu 36 7 99465904 99465904 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 99465904 99465904 ZKSCAN1 7 C C G 25 SYTL4 94121 genome.wustl.edu 36 X 99828803 99828803 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 99828803 99828803 SYTL4 23 C C G 28 ADH1A 124 genome.wustl.edu 36 4 100427037 100427037 + Silent SNP G G A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 100427037 100427037 ADH1A 4 G G A 45 SERPINE1 5054 genome.wustl.edu 36 7 100560506 100560506 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 100560506 100560506 SERPINE1 7 C C T 27 ARMC10 83787 genome.wustl.edu 36 7 102526015 102526015 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 102526015 102526015 ARMC10 7 C C T 21 HCFC2 29915 genome.wustl.edu 36 12 103011382 103011382 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 103011382 103011382 HCFC2 12 C C T 19 GBF1 8729 genome.wustl.edu 36 10 104101604 104101604 + Silent SNP G G C novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 104101604 104101604 GBF1 10 G G C 46 IGHG2 genome.wustl.edu 36 14 105181466 105181466 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 105181466 105181466 IGHG2 14 C C G 20 COL4A6 1288 genome.wustl.edu 36 X 107318543 107318543 + Missense_Mutation SNP A A T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 A A Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 107318543 107318543 COL4A6 23 A A T 5 DLAT 1737 genome.wustl.edu 36 11 111404779 111404779 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 111404779 111404779 DLAT 11 C C G 24 HTR2C 3358 genome.wustl.edu 36 X 113872086 113872086 + Missense_Mutation SNP T T A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 113872086 113872086 HTR2C 23 T T A 55 PTPN4 5775 genome.wustl.edu 36 2 120284016 120284016 + Silent SNP T T A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 120284016 120284016 PTPN4 2 T T A 55 NOV 4856 genome.wustl.edu 36 8 120504343 120504343 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 120504343 120504343 NOV 8 G G C 34 TACC2 10579 genome.wustl.edu 36 10 123833228 123833228 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C T C C Unknown Valid Somatic 4 Capture Sanger_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 123833228 123833228 TACC2 10 C C T 30 DHX32 55760 genome.wustl.edu 36 10 127516947 127516947 + Splice_Site_SNP SNP C C G novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Splice_Site_SNP SNP 127516947 127516947 DHX32 10 C C G 32 EXOC4 60412 genome.wustl.edu 36 7 132588414 132588414 + Missense_Mutation SNP C C A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 132588414 132588414 EXOC4 7 C C A 28 TG 7038 genome.wustl.edu 36 8 133989661 133989661 + Missense_Mutation SNP A A T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 A A Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 133989661 133989661 TG 8 A A T 7 MATR3 9782 genome.wustl.edu 36 5 138671722 138671722 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 138671722 138671722 MATR3 5 C C G 31 uc003wae.2 genome.wustl.edu 36 7 142108338 142108338 + Silent SNP T T C novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 142108338 142108338 uc003wae.2 7 T T C 62 PRSS2 5645 genome.wustl.edu 36 7 142180011 142180011 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 142180011 142180011 PRSS2 7 C C G 31 HTR4 3360 genome.wustl.edu 36 5 147825661 147825661 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 147825661 147825661 HTR4 5 C C G 28 PIP5K1A 8394 genome.wustl.edu 36 1 149471789 149471789 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 149471789 149471789 PIP5K1A 1 C C G 30 CGN 57530 genome.wustl.edu 36 1 149775932 149775932 + Missense_Mutation SNP G G A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 149775932 149775932 CGN 1 G G A 41 PASD1 139135 genome.wustl.edu 36 X 150593173 150593173 + Silent SNP A A T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 150593173 150593173 PASD1 23 A A T 5 FLG2 388698 genome.wustl.edu 36 1 150594500 150594500 + Missense_Mutation SNP G G T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 150594500 150594500 FLG2 1 G G T 48 P2RY13 53829 genome.wustl.edu 36 3 152528881 152528881 + Missense_Mutation SNP C C A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 152528881 152528881 P2RY13 3 C C A 21 P2RY13 53829 genome.wustl.edu 36 3 152528886 152528886 + Missense_Mutation SNP A A C novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 152528886 152528886 P2RY13 3 A A C 1 MYCT1 80177 genome.wustl.edu 36 6 153084576 153084576 + Missense_Mutation SNP T T A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 153084576 153084576 MYCT1 6 T T A 56 ADAM19 8728 genome.wustl.edu 36 5 156851246 156851246 + Missense_Mutation SNP G A A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G A A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 156851246 156851246 ADAM19 5 G A A 44 ITLN1 55600 genome.wustl.edu 36 1 159117595 159117595 + Silent SNP C C A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 159117595 159117595 ITLN1 1 C C A 21 LPA 4018 genome.wustl.edu 36 6 160888880 160888880 + Silent SNP A A T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 A A Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 160888880 160888880 LPA 6 A A T 7 DDR2 4921 genome.wustl.edu 36 1 160989543 160989543 + Silent SNP C C T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C T C C Unknown Valid Somatic 4 Capture Sanger_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 160989543 160989543 DDR2 1 C C T 26 TADA1 117143 genome.wustl.edu 36 1 165098153 165098153 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 165098153 165098153 TADA1 1 G G C 34 SLITRK3 22865 genome.wustl.edu 36 3 166391031 166391031 + Silent SNP G G T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 166391031 166391031 SLITRK3 3 G G T 47 F5 2153 genome.wustl.edu 36 1 167750264 167750264 + Missense_Mutation SNP T T A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 167750264 167750264 F5 1 T T A 52 LRP2 4036 genome.wustl.edu 36 2 169741183 169741183 + Missense_Mutation SNP A A C novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 169741183 169741183 LRP2 2 A A C 6 LRP2 4036 genome.wustl.edu 36 2 169781086 169781086 + Missense_Mutation SNP T T A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 169781086 169781086 LRP2 2 T T A 62 RUFY1 80230 genome.wustl.edu 36 5 178953205 178953205 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 178953205 178953205 RUFY1 5 C C G 28 TTN 7273 genome.wustl.edu 36 2 179172732 179172732 + Missense_Mutation SNP G G A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 179172732 179172732 TTN 2 G G A 39 CAMSAP1L1 23271 genome.wustl.edu 36 1 199068074 199068074 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 199068074 199068074 CAMSAP1L1 1 G G C 45 CR1 1378 genome.wustl.edu 36 1 205807862 205807862 + Silent SNP C C A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 205807862 205807862 CR1 1 C C A 24 USH2A 7399 genome.wustl.edu 36 1 214030129 214030129 + Nonsense_Mutation SNP A A T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 214030129 214030129 USH2A 1 A A T 6 SP100 6672 genome.wustl.edu 36 2 231114890 231114890 + Silent SNP T T C novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 231114890 231114890 SP100 2 T T C 60 HMGCS2 3158 genome.wustl.edu 36 1 120097460 120097460 + Silent SNP G G A Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G A G G Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 120097460 120097460 HMGCS2 1 G G A 33 C14orf149 112849 genome.wustl.edu 36 14 59015712 59015712 + Missense_Mutation SNP C C G Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C G C C Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 59015712 59015712 C14orf149 14 C C G 25 NRXN3 9369 genome.wustl.edu 36 14 77779249 77779249 + Silent SNP C C G novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 77779249 77779249 NRXN3 14 C C G 22 CCDC33 80125 genome.wustl.edu 36 15 72414492 72414492 + Missense_Mutation SNP C C A Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C A C C Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 72414492 72414492 CCDC33 15 C C A 22 NMS 129521 genome.wustl.edu 36 2 100463390 100463390 + Missense_Mutation SNP G G T Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G T G G Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 100463390 100463390 NMS 2 G G T 43 FAM171B 165215 genome.wustl.edu 36 2 187335610 187335610 + Nonsense_Mutation SNP G G T Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G T G G Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 187335610 187335610 FAM171B 2 G G T 47 EML4 27436 genome.wustl.edu 36 2 42409532 42409532 + Missense_Mutation SNP G G C Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G C G G Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 42409532 42409532 EML4 2 G G C 48 RIPK4 54101 genome.wustl.edu 36 21 42034550 42034550 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 42034550 42034550 RIPK4 21 G G C 37 RPS3A 6189 genome.wustl.edu 36 4 152243643 152243643 + Silent SNP G G A Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G A G G Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 152243643 152243643 RPS3A 4 G G A 35 KLKB1 3818 genome.wustl.edu 36 4 187414210 187414210 + Silent SNP C C A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 187414210 187414210 KLKB1 4 C C A 23 SLC44A4 80736 genome.wustl.edu 36 6 31946600 31946600 + Missense_Mutation SNP T T C novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 31946600 31946600 SLC44A4 6 T T C 57 ABCA13 154664 genome.wustl.edu 36 7 48284358 48284358 + Missense_Mutation SNP T T A novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 48284358 48284358 ABCA13 7 T T A 58 TEX15 56154 genome.wustl.edu 36 8 30821929 30821929 + Missense_Mutation SNP G G A Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G A G G Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 30821929 30821929 TEX15 8 G G A 34 UBAP2 55833 genome.wustl.edu 36 9 33943309 33943309 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 33943309 33943309 UBAP2 9 C C T 19 SPTAN1 6709 genome.wustl.edu 36 9 130389791 130389791 + Frame_Shift_Del DEL C C - Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C - C C Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Frame_Shift_Del DEL 130389791 130389791 SPTAN1 9 C C - 30 UBR4 23352 genome.wustl.edu 36 1 19316463 19316463 + Silent SNP C C T Unknown TCGA-13-0920-01 TCGA-13-0920-10 C C C T C C Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 19316463 19316463 UBR4 1 C C T 27 MUC16 94025 genome.wustl.edu 36 19 8837817 8837817 + Silent SNP G G A Unknown TCGA-13-0920-01 TCGA-13-0920-10 G G G A G G Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 8837817 8837817 MUC16 19 G G A 33 LUZP4 51213 genome.wustl.edu 36 X 114444178 114444178 + Missense_Mutation SNP A A T Unknown TCGA-13-0920-01 TCGA-13-0920-10 A A A T A A Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 114444178 114444178 LUZP4 23 A A T 5