Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer dataset type classification start end gene chr ref_allele tum_allele1 tum_allele2 context IFT140 9742 genome.wustl.edu 36 16 1582488 1582488 + Missense_Mutation SNP G G A novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 1582488 1582488 IFT140 16 G G A 39 ZNF594 84622 genome.wustl.edu 36 17 5026482 5026482 + Silent SNP G G A novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 5026482 5026482 ZNF594 17 G G A 46 CHGB 1114 genome.wustl.edu 36 20 5852197 5852197 + Missense_Mutation SNP A A T novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 5852197 5852197 CHGB 20 A A T 9 TP53 7157 genome.wustl.edu 36 17 7519251 7519251 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 7519251 7519251 TP53 17 C C T 25 MYH3 4621 genome.wustl.edu 36 17 10486645 10486645 + Missense_Mutation SNP T T C novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 10486645 10486645 MYH3 17 T T C 63 UNC13A 23025 genome.wustl.edu 36 19 17604933 17604933 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 17604933 17604933 UNC13A 19 C C T 29 PTPN5 84867 genome.wustl.edu 36 11 18716018 18716018 + Missense_Mutation SNP T T C novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 18716018 18716018 PTPN5 11 T T C 63 CRNKL1 51340 genome.wustl.edu 36 20 19970259 19970259 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 19970259 19970259 CRNKL1 20 C C T 24 DHRS4 10901 genome.wustl.edu 36 14 23494095 23494095 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 23494095 23494095 DHRS4 14 C C T 26 SCGN 10590 genome.wustl.edu 36 6 25778216 25778216 + Missense_Mutation SNP G G A novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 25778216 25778216 SCGN 6 G G A 37 HIST1H4H 8365 genome.wustl.edu 36 6 26393702 26393702 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 26393702 26393702 HIST1H4H 6 G G C 33 XKR7 343702 genome.wustl.edu 36 20 30048672 30048672 + Silent SNP C C T novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 30048672 30048672 XKR7 20 C C T 22 CLASP2 23122 genome.wustl.edu 36 3 33661311 33661311 + Silent SNP G G A novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 33661311 33661311 CLASP2 3 G G A 39 HMOX1 3162 genome.wustl.edu 36 22 34112809 34112809 + Silent SNP C C T novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 34112809 34112809 HMOX1 22 C C T 18 PIP4K2B 8396 genome.wustl.edu 36 17 34190269 34190269 + Missense_Mutation SNP C C A novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 34190269 34190269 PIP4K2B 17 C C A 19 PPARD 5467 genome.wustl.edu 36 6 35500315 35500315 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 35500315 35500315 PPARD 6 C C T 25 EIF2C1 26523 genome.wustl.edu 36 1 36140456 36140456 + Missense_Mutation SNP G G T novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 36140456 36140456 EIF2C1 1 G G T 43 STK38 11329 genome.wustl.edu 36 6 36574132 36574132 + Missense_Mutation SNP C C A novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 36574132 36574132 STK38 6 C C A 24 LRRFIP2 9209 genome.wustl.edu 36 3 37100239 37100239 + Silent SNP G G A novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 37100239 37100239 LRRFIP2 3 G G A 48 ELMO1 9844 genome.wustl.edu 36 7 37219579 37219579 + Silent SNP G G A novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 37219579 37219579 ELMO1 7 G G A 41 KLHL10 317719 genome.wustl.edu 36 17 37255021 37255021 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 37255021 37255021 KLHL10 17 G G C 45 PREPL 9581 genome.wustl.edu 36 2 44402469 44402469 + Splice_Site_SNP SNP C C A novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Splice_Site_SNP SNP 44402469 44402469 PREPL 2 C C A 18 ZNF197 10168 genome.wustl.edu 36 3 44659624 44659624 + Missense_Mutation SNP T T G novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 T T T G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 44659624 44659624 ZNF197 3 T T G 64 C21orf57 54059 genome.wustl.edu 36 21 46535738 46535738 + Missense_Mutation SNP T T G novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 T T T G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 46535738 46535738 C21orf57 21 T T G 64 ATP9A 10079 genome.wustl.edu 36 20 49744045 49744045 + Missense_Mutation SNP G G A novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 49744045 49744045 ATP9A 20 G G A 45 SPIN3 169981 genome.wustl.edu 36 X 57037963 57037963 + Missense_Mutation SNP T T G novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 T T T G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 57037963 57037963 SPIN3 23 T T G 60 SETD6 79918 genome.wustl.edu 36 16 57109887 57109887 + Missense_Mutation SNP G G A novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 57109887 57109887 SETD6 16 G G A 41 STX3 6809 genome.wustl.edu 36 11 59317198 59317198 + Missense_Mutation SNP A A G novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 59317198 59317198 STX3 11 A A G 5 BATF2 116071 genome.wustl.edu 36 11 64513696 64513696 + Silent SNP C C T novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 64513696 64513696 BATF2 11 C C T 24 ENAM 10117 genome.wustl.edu 36 4 71728831 71728831 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 71728831 71728831 ENAM 4 C C G 21 SCAMP2 10066 genome.wustl.edu 36 15 72928000 72928000 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 72928000 72928000 SCAMP2 15 C C G 22 SNW1 22938 genome.wustl.edu 36 14 77273125 77273125 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 77273125 77273125 SNW1 14 G G C 48 ELMOD3 genome.wustl.edu 36 2 85452087 85452087 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 85452087 85452087 ELMOD3 2 C C G 26 SYNCRIP 10492 genome.wustl.edu 36 6 86381481 86381481 + Silent SNP A A C novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 86381481 86381481 SYNCRIP 6 A A C 10 WDR93 56964 genome.wustl.edu 36 15 88071457 88071457 + Missense_Mutation SNP G G A novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 88071457 88071457 WDR93 15 G G A 39 GPR98 84059 genome.wustl.edu 36 5 90060294 90060294 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 90060294 90060294 GPR98 5 G G C 37 NR2C1 7181 genome.wustl.edu 36 12 93969683 93969683 + Silent SNP G G A novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 93969683 93969683 NR2C1 12 G G A 40 CASD1 64921 genome.wustl.edu 36 7 94006277 94006277 + Missense_Mutation SNP G G C novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 94006277 94006277 CASD1 7 G G C 45 ELK3 2004 genome.wustl.edu 36 12 95164924 95164924 + Missense_Mutation SNP C C G novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 95164924 95164924 ELK3 12 C C G 30 KIAA1529 57653 genome.wustl.edu 36 9 99132707 99132707 + Nonsense_Mutation SNP T T G novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 T T T G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 99132707 99132707 KIAA1529 9 T T G 61 LOXL4 84171 genome.wustl.edu 36 10 100001368 100001368 + Missense_Mutation SNP A A G novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 100001368 100001368 LOXL4 10 A A G 4 ZPLD1 131368 genome.wustl.edu 36 3 103670511 103670511 + Missense_Mutation SNP C C A novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 103670511 103670511 ZPLD1 3 C C A 22 ADPRH 141 genome.wustl.edu 36 3 120788176 120788176 + Missense_Mutation SNP A A C novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 120788176 120788176 ADPRH 3 A A C 5 PARP14 54625 genome.wustl.edu 36 3 123919723 123919723 + Silent SNP G G T novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 123919723 123919723 PARP14 3 G G T 46 GRM8 2918 genome.wustl.edu 36 7 125960745 125960745 + Missense_Mutation SNP G G T novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 125960745 125960745 GRM8 7 G G T 44 GRM8 2918 genome.wustl.edu 36 7 125961007 125961007 + Silent SNP A A T novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 125961007 125961007 GRM8 7 A A T 1 AHCYL2 23382 genome.wustl.edu 36 7 128806799 128806799 + Nonsense_Mutation SNP C C T novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 128806799 128806799 AHCYL2 7 C C T 29 ENOX2 10495 genome.wustl.edu 36 X 129599066 129599066 + Splice_Site_SNP SNP C C A novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Splice_Site_SNP SNP 129599066 129599066 ENOX2 23 C C A 28 MKI67 4288 genome.wustl.edu 36 10 129795130 129795130 + Missense_Mutation SNP G G A novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 129795130 129795130 MKI67 10 G G A 48 FMR1 2332 genome.wustl.edu 36 X 146817604 146817604 + Splice_Site_SNP SNP G G T novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Splice_Site_SNP SNP 146817604 146817604 FMR1 23 G G T 44 SCN1A 6323 genome.wustl.edu 36 2 166557083 166557083 + Missense_Mutation SNP T T A novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 166557083 166557083 SCN1A 2 T T A 50 CCR6 1235 genome.wustl.edu 36 6 167469736 167469736 + Missense_Mutation SNP G G A novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 167469736 167469736 CCR6 6 G G A 37 RANBP17 64901 genome.wustl.edu 36 5 170284047 170284047 + Silent SNP A A G novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 170284047 170284047 RANBP17 5 A A G 4 SLC2A2 6514 genome.wustl.edu 36 3 172207654 172207654 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 172207654 172207654 SLC2A2 3 C C T 19 KCNT2 343450 genome.wustl.edu 36 1 194562493 194562493 + Silent SNP G G A novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 194562493 194562493 KCNT2 1 G G A 47 DSEL 92126 genome.wustl.edu 36 18 63331960 63331961 + Frame_Shift_Del DEL TG TG - novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 TG TG Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Frame_Shift_Del DEL 63331960 63331961 DSEL 18 TG TG - 55 CAT 847 genome.wustl.edu 36 11 34427407 34427407 + Silent SNP G G A Unknown TCGA-13-0795-01 TCGA-13-0795-10 G G G A G G Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 34427407 34427407 CAT 11 G G A 35 FAT3 120114 genome.wustl.edu 36 11 92239912 92239912 + Missense_Mutation SNP G G A Unknown TCGA-13-0795-01 TCGA-13-0795-10 G G G A G G Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 92239912 92239912 FAT3 11 G G A 38 LRRK2 120892 genome.wustl.edu 36 12 38985923 38985923 + Missense_Mutation SNP T T A Unknown TCGA-13-0795-01 TCGA-13-0795-10 T T T A T T Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 38985923 38985923 LRRK2 12 T T A 50 GLIPR1 11010 genome.wustl.edu 36 12 74170514 74170514 + Missense_Mutation SNP G G T Unknown TCGA-13-0795-01 TCGA-13-0795-10 G G G T G G Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 74170514 74170514 GLIPR1 12 G G T 42 TTN 7273 genome.wustl.edu 36 2 179300650 179300650 + Missense_Mutation SNP A A C novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 179300650 179300650 TTN 2 A A C 15 TTN 7273 genome.wustl.edu 36 2 179300652 179300652 + Missense_Mutation SNP A A C novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 179300652 179300652 TTN 2 A A C 11 OSTalpha 200931 genome.wustl.edu 36 3 197443710 197443710 + Silent SNP A A C Unknown TCGA-13-0795-01 TCGA-13-0795-10 A A A C A A Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 197443710 197443710 OSTalpha 3 A A C 14 LOC100128619 0 genome.wustl.edu 36 5 172504181 172504181 + Missense_Mutation SNP C C T Unknown TCGA-13-0795-01 TCGA-13-0795-10 C C C T C C Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 172504181 172504181 LOC100128619 5 C C T 30 ERAP1 51752 genome.wustl.edu 36 5 96147252 96147252 + Missense_Mutation SNP C C T novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 96147252 96147252 ERAP1 5 C C T 19 HIST1H1C 3006 genome.wustl.edu 36 6 26163994 26163994 + Nonsense_Mutation SNP C C G Unknown TCGA-13-0795-01 TCGA-13-0795-10 C C C G C C Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 26163994 26163994 HIST1H1C 6 C C G 24 MGAM 8972 genome.wustl.edu 36 7 141405774 141405774 + Silent SNP C C A novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 141405774 141405774 MGAM 7 C C A 27 PRKDC 5591 genome.wustl.edu 36 8 48909312 48909312 + Missense_Mutation SNP T T C novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 48909312 48909312 PRKDC 8 T T C 64 RAB40AL genome.wustl.edu 36 X 102079111 102079112 + Missense DNP CG CG TT novel Unknown TCGA-13-0795-01 TCGA-13-0795-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense DNP 102079111 102079112 RAB40AL 23 CG CG TT 19 USP25 29761 genome.wustl.edu 36 21 16172022 16172022 + Missense_Mutation SNP G G C Unknown TCGA-13-0795-01 TCGA-13-0795-10 G G G C G G Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 16172022 16172022 USP25 21 G G C 47 NKAPL 222698 genome.wustl.edu 36 6 28335697 28335697 + Missense_Mutation SNP A A G Unknown TCGA-13-0795-01 TCGA-13-0795-10 A A A G A A Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 28335697 28335697 NKAPL 6 A A G 3