Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	dbSNP_AF	Algorithm
RNF220	55182	hgsc.bcm.edu	hg19	1	45111132	45111132	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	.	RNF220	NM_018150	exon12	c.A1417G	p.K473E	ATGCAGAAGACCT	.	126.0	31.0	144.0	0.0	.	56	.	.	Atlas-SNP
PCSK9	255738	hgsc.bcm.edu	hg19	1	55521763	55521763	+	Silent	SNP	C	C	T	novel		TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	PCSK9,NS,carcinoma,0,1	PCSK9	NM_174936	exon6	c.C897T	p.A299A	CAACGCCGCCTGC	.	151.0	7.0	156.0	0.0	.	76	.	.	Atlas-SNP
ATP1A1	476	hgsc.bcm.edu	hg19	1	116940569	116940569	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	.	ATP1A1	NM_001160233	exon15	c.T2033C	p.L678P	AGCAGCTGGATGA	.	56.0	10.0	80.0	0.0	.	87	.	.	Atlas-SNP
TBX19	9095	hgsc.bcm.edu	hg19	1	168274288	168274288	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	.	TBX19	NM_005149	exon6	c.C770T	p.A257V	GCACAGCAGGAAA	.	71.0	12.0	68.0	0.0	.	68	.	.	Atlas-SNP
ZRANB3	84083	hgsc.bcm.edu	hg19	2	136071142	136071142	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	.	ZRANB3	NM_032143	exon8	c.A883T	p.I295L	TCATTATTTTTTC	.	86.0	21.0	87.0	0.0	.	109	.	.	Atlas-SNP
STAB1	23166	hgsc.bcm.edu	hg19	3	52550761	52550761	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	.	STAB1	NM_015136	exon41	c.C4340A	p.S1447Y	GATACTCCGGCAA	.	164.0	34.0	154.0	0.0	.	178	.	.	Atlas-SNP
N4BP2	55728	hgsc.bcm.edu	hg19	4	40098980	40098980	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	.	N4BP2	NM_018177	exon3	c.A20G	p.N7S	GGAAAAATCTTGG	.	73.0	9.0	114.0	0.0	.	166	.	.	Atlas-SNP
REST	5978	hgsc.bcm.edu	hg19	4	57797085	57797085	+	Silent	SNP	G	G	A	novel		TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	.	REST	NM_001193508	exon4	c.G2061A	p.L687L	GGAGCTGCCTCCT	.	92.0	4.0	108.0	0.0	.	104	.	.	Atlas-SNP
FGA	2243	hgsc.bcm.edu	hg19	4	155507560	155507560	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	.	FGA	NM_000508	exon5	c.A1021C	p.T341P	TTCCAGTTCCAGA	.	101.0	6.0	155.0	0.0	.	179	.	.	Atlas-SNP
SPINK5	11005	hgsc.bcm.edu	hg19	5	147477477	147477477	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	.	SPINK5	NM_001127699	exon11	c.C930G	p.F310L	ACTTTTCTGTACC	.	95.0	14.0	92.0	0.0	.	245	.	.	Atlas-SNP
GABBR1	2550	hgsc.bcm.edu	hg19	6	29599274	29599274	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	.	GABBR1	NM_021904	exon3	c.T188A	p.I63N	TACTCAATCTCAT	.	105.0	9.0	107.0	0.0	.	95	.	.	Atlas-SNP
ELOVL5	60481	hgsc.bcm.edu	hg19	6	53134002	53134002	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	.	ELOVL5	NM_001242828	exon9	c.G904T	p.A302S	CAGCAGCCATGGA	.	99.0	5.0	116.0	0.0	.	25	.	.	Atlas-SNP
ELOVL5	60481	hgsc.bcm.edu	hg19	6	53134003	53134003	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	.	ELOVL5	NM_001242828	exon9	c.G903T	p.M301I	AGCAGCCATGGAC	.	99.0	5.0	115.0	0.0	.	25	.	.	Atlas-SNP
CEP41	95681	hgsc.bcm.edu	hg19	7	130067812	130067812	+	Silent	SNP	T	T	C	novel		TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	.	.	NM_001257159	exon2	c.A81G	p.K27K	TCTTGATTTGATA	.	41.0	9.0	55.0	0.0	.	.	.	.	Atlas-SNP
DPP6	1804	hgsc.bcm.edu	hg19	7	154667656	154667656	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	.	DPP6	NM_130797	exon20	c.G1924A	p.E642K	AAGTTCGAGGTGA	.	88.0	26.0	95.0	0.0	.	383	.	.	Atlas-SNP
DPP6	1804	hgsc.bcm.edu	hg19	7	154677362	154677362	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	.	DPP6	NM_130797	exon22	c.G2153A	p.S718N	ACCTGAGCACCTA	.	95.0	24.0	96.0	0.0	.	383	.	.	Atlas-SNP
COL5A1	1289	hgsc.bcm.edu	hg19	9	137696861	137696861	+	Missense_Mutation	SNP	C	C	T	rs377125301		TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	.	COL5A1	NM_000093	exon40	c.C3155T	p.P1052L	ATGGCCCTCCAGG	.	80.0	13.0	90.0	0.0	.	323	.	.	Atlas-SNP
OR5M8	219484	hgsc.bcm.edu	hg19	11	56257944	56257944	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	.	OR5M8	NM_001005282	exon1	c.C903G	p.I301M	CTCTTTGATTAAT	.	113.0	7.0	168.0	0.0	.	74	.	.	Atlas-SNP
SMTNL1	219537	hgsc.bcm.edu	hg19	11	57310235	57310235	+	Silent	SNP	G	G	A	novel		TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	.	SMTNL1	NM_001105565	exon1	c.G120A	p.K40K	TGGAAAGGCCATC	.	178.0	28.0	251.0	0.0	.	68	.	.	Atlas-SNP
OSBP	5007	hgsc.bcm.edu	hg19	11	59369293	59369293	+	Missense_Mutation	SNP	T	T	C	rs370601390	alternate_allele	TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	.	OSBP	NM_002556	exon4	c.A841G	p.M281V	CTAACATGAGGAA	.	85.0	15.0	121.0	0.0	.	57	.	.	Atlas-SNP
CCND2	894	hgsc.bcm.edu	hg19	12	4385334	4385334	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	.	CCND2	NM_001759	exon2	c.C359A	p.A120E	TGACCGCGGAGAA	.	67.0	7.0	78.0	0.0	.	50	.	.	Atlas-SNP
STARD13	90627	hgsc.bcm.edu	hg19	13	33704163	33704163	+	Silent	SNP	T	T	C	novel		TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	.	STARD13	NM_178006	exon5	c.A651G	p.T217T	GTTGTCTGTACAG	.	40.0	8.0	52.0	0.0	.	100	.	.	Atlas-SNP
THBS1	7057	hgsc.bcm.edu	hg19	15	39874936	39874936	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	.	THBS1	NM_003246	exon3	c.G610A	p.V204I	GGGGGCGTCAATG	.	34.0	5.0	39.0	0.0	.	106	.	.	Atlas-SNP
ARL6IP1	23204	hgsc.bcm.edu	hg19	16	18804626	18804626	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	.	ARL6IP1	NM_015161	exon6	c.C560A	p.A187D	CTCTTGGCCATTC	.	139.0	6.0	169.0	0.0	.	23	.	.	Atlas-SNP
PPM1D	8493	hgsc.bcm.edu	hg19	17	58740434	58740434	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	PPM1D,scalp,carcinoma,0,1	PPM1D	NM_003620	exon6	c.G1339T	p.E447X	TTCTCAGAGAATT	.	102.0	18.0	122.0	0.0	.	50	.	.	Atlas-SNP
MED13	9969	hgsc.bcm.edu	hg19	17	60059776	60059776	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	.	MED13	NM_005121	exon16	c.C3588A	p.C1196X	ATTAGTGCACTGA	.	104.0	11.0	151.0	0.0	.	181	.	.	Atlas-SNP
MED13	9969	hgsc.bcm.edu	hg19	17	60059777	60059777	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	.	MED13	NM_005121	exon16	c.G3587A	p.C1196Y	TTAGTGCACTGAT	.	102.0	11.0	150.0	0.0	.	181	.	.	Atlas-SNP
ZFP28	140612	hgsc.bcm.edu	hg19	19	57065959	57065959	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	.	ZFP28	NM_020828	exon8	c.T1805C	p.I602T	AGAATATACACCT	.	148.0	25.0	174.0	0.0	.	99	.	.	Atlas-SNP
CHRNA4	1137	hgsc.bcm.edu	hg19	20	61981058	61981058	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	.	CHRNA4	NM_000744	exon5	c.G1705A	p.E569K	CGCCCTCCACCGC	.	106.0	10.0	132.0	0.0	.	98	.	.	Atlas-SNP
BAHD1	22893	hgsc.bcm.edu	hg19	15	40758269	40758270	+	Frame_Shift_Ins	INS	-	-	T	novel		TCGA-MR-A8JO-01A-12D-A35Z-10	TCGA-MR-A8JO-10A-01D-A35Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	66a02e7c-ba44-4552-b8c9-3161a5b2c0e0	de1fdde4-5d17-43bb-a055-456bace72e84	.	BAHD1	NM_014952	exon7	c.2283_2284insT	p.V761fs	.	.	142.0	34.0	162.0	0.0	.	68	.	.	Atlas-INDEL