Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COSMIC_Codon COSMIC_Gene Transcript_Id Exon ChromChange AAChange Genome_Plus_Minus_10_Bp Drug_Target TTotCov TVarCov NTotCov NVarCov dbSNPPopFreq COSMIC_Gene_Freq COSMIC_Site_Freq dbSNP_AF Algorithm CROCC 9696 hgsc.bcm.edu hg19 1 17296811 17296811 + Missense_Mutation SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . CROCC NM_014675 exon34 c.G5515A p.E1839K CAAGACGAGCGGC . 165.0 27.0 92.0 0.0 . 185 . . Atlas-SNP EBNA1BP2 10969 hgsc.bcm.edu hg19 1 43638006 43638006 + Silent SNP C C T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . EBNA1BP2 NM_001159936 exon1 c.G87A p.P29P TACTTCCGGTTTG . 60.0 25.0 65.0 0.0 . 37 . . Atlas-SNP COL24A1 255631 hgsc.bcm.edu hg19 1 86289219 86289219 + Silent SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . COL24A1 NM_152890 exon45 c.A3789G p.E1263E ACTTACTTCAGAT . 133.0 33.0 147.0 0.0 . 202 . . Atlas-SNP DPYD 1806 hgsc.bcm.edu hg19 1 98015267 98015267 + Missense_Mutation SNP C C T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed DPYD,acral,malignant_melanoma,0,2 DPYD NM_000110 exon12 c.G1373A p.R458K CCCCATCTGTTAA . 67.0 14.0 78.0 0.0 . 219 . . Atlas-SNP PDE4DIP 9659 hgsc.bcm.edu hg19 1 144886226 144886226 + Missense_Mutation SNP T T G rs139542367 alternate_allele TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . PDE4DIP NM_001198832 exon26 c.A3206C p.Q1069P TCTTCCTGAAGAC . 163.0 19.0 137.0 0.0 . 817 . . Atlas-SNP RFX5 5993 hgsc.bcm.edu hg19 1 151315082 151315082 + Silent SNP C C T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . RFX5 NM_000449 exon11 c.G1431A p.G477G CCTTTCCCCACTT . 122.0 15.0 90.0 0.0 . 69 . . Atlas-SNP TCHH 7062 hgsc.bcm.edu hg19 1 152083480 152083480 + Missense_Mutation SNP T T A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . TCHH NM_007113 exon3 c.A2213T p.K738M CGCCTCTTTTCCT . 91.0 6.0 52.0 0.0 . 275 . . Atlas-SNP FLG 2312 hgsc.bcm.edu hg19 1 152280916 152280916 + Missense_Mutation SNP C C T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . FLG NM_002016 exon3 c.G6446A p.R2149K CCCTGTCTTCCTC . 162.0 24.0 91.0 0.0 . 900 . . Atlas-SNP NTRK1 4914 hgsc.bcm.edu hg19 1 156851354 156851354 + Missense_Mutation SNP C C T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . NTRK1 NM_002529 exon17 c.C2311T p.R771C CAGCAACGCCACA . 202.0 25.0 147.0 0.0 . 287 . . Atlas-SNP KIRREL 55243 hgsc.bcm.edu hg19 1 158061204 158061204 + Silent SNP G G T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . KIRREL NM_018240 exon11 c.G1329T p.V443V TACAGTGGAGAGG . 151.0 79.0 99.0 0.0 . 346 . . Atlas-SNP ADAMTS4 9507 hgsc.bcm.edu hg19 1 161163059 161163059 + Missense_Mutation SNP A A C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ADAMTS4 NM_005099 exon7 c.T1855G p.C619G GTTTGCACTGGTC . 71.0 5.0 43.0 0.0 . 171 . . Atlas-SNP UAP1 6675 hgsc.bcm.edu hg19 1 162551100 162551100 + Missense_Mutation SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . UAP1 NM_003115 exon5 c.G685A p.A229T TATCGGGCACTTG . 161.0 20.0 125.0 0.0 . 47 . . Atlas-SNP PBX1 5087 hgsc.bcm.edu hg19 1 164776788 164776788 + Silent SNP A A G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . PBX1 NM_001204963 exon5 c.A711G p.R237R GAAGAGACGGAAT . 308.0 46.0 180.0 0.0 . 60 . . Atlas-SNP UCK2 7371 hgsc.bcm.edu hg19 1 165865569 165865569 + Missense_Mutation SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . UCK2 NM_012474 exon4 c.G499A p.V167I CGCAGAGGTGCGT . 113.0 15.0 68.0 0.0 . 31 . . Atlas-SNP TNFSF4 7292 hgsc.bcm.edu hg19 1 173176191 173176191 + Missense_Mutation SNP T T G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . TNFSF4 NM_003326 exon1 c.A125C p.Y42S CAGATGTAGGTGA . 107.0 57.0 86.0 0.0 . 29 . . Atlas-SNP ZBTB37 84614 hgsc.bcm.edu hg19 1 173839522 173839522 + Missense_Mutation SNP C C G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ZBTB37 NM_032522 exon3 c.C159G p.S53R TGCCAGCTCCCCC . 218.0 30.0 141.0 0.0 . 38 . . Atlas-SNP TOR1AIP2 163590 hgsc.bcm.edu hg19 1 179815788 179815788 + Silent SNP T T A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . TOR1AIP2 NM_001199260 exon7 c.A831T p.G277G CTTCCGTCCTCTC . 103.0 10.0 97.0 0.0 . 38 . . Atlas-SNP FAM129A 116496 hgsc.bcm.edu hg19 1 184764664 184764664 + Missense_Mutation SNP T T A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . FAM129A NM_052966 exon14 c.A2234T p.E745V TCTTCTTCATTTT . 87.0 11.0 61.0 0.0 . 98 . . Atlas-SNP SERTAD4 56256 hgsc.bcm.edu hg19 1 210414923 210414923 + Silent SNP A A G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . SERTAD4 NM_019605 exon4 c.A312G p.E104E TGAGGAACGAGCC . 160.0 22.0 100.0 0.0 . 53 . . Atlas-SNP CENPF 1063 hgsc.bcm.edu hg19 1 214814115 214814115 + Missense_Mutation SNP A A C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . CENPF NM_016343 exon12 c.A2434C p.S812R GAGAGGAGTGAAT . 249.0 35.0 151.0 0.0 . 321 . . Atlas-SNP RAB3GAP2 25782 hgsc.bcm.edu hg19 1 220364508 220364508 + Silent SNP T T C rs149874983 alternate_allele TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . RAB3GAP2 NM_012414 exon14 c.A1389G p.Q463Q AAGGAATTGAGCT . 147.0 22.0 105.0 0.0 . 120 . T|1.000;G|0.000 Atlas-SNP EPHX1 2052 hgsc.bcm.edu hg19 1 226030084 226030084 + Missense_Mutation SNP T T A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . EPHX1 NM_001136018 exon7 c.T949A p.S317T AATGACTCTCCTG . 74.0 9.0 52.0 0.0 . 57 . . Atlas-SNP PLD5 200150 hgsc.bcm.edu hg19 1 242511470 242511470 + Silent SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . PLD5 NM_152666 exon3 c.C264T p.A88A GTCCACGGCTGAA . 62.0 22.0 43.0 0.0 . 216 . . Atlas-SNP ZBTB18 10472 hgsc.bcm.edu hg19 1 244217368 244217368 + Missense_Mutation SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . . NM_205768 exon2 c.T292C p.F98L CTCCAGTTCAAAG . 112.0 42.0 74.0 0.0 . . . . Atlas-SNP TRIM58 25893 hgsc.bcm.edu hg19 1 248039449 248039449 + Silent SNP C C T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . TRIM58 NM_015431 exon6 c.C1119T p.T373T GGAAACCACGCCA . 169.0 23.0 114.0 0.0 . 143 . . Atlas-SNP KIDINS220 57498 hgsc.bcm.edu hg19 2 8871439 8871439 + Missense_Mutation SNP G G T rs202036173 bycluster;alternate_allele TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed KIDINS220,NS,carcinoma,0,1 KIDINS220 NM_020738 exon30 c.C4727A p.A1576E AGGAGCGCATCCG . 88.0 4.0 53.0 0.0 . 136 . . Atlas-SNP GREB1 9687 hgsc.bcm.edu hg19 2 11777860 11777860 + Missense_Mutation SNP G G T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed GREB1_ENST00000381486,NS,carcinoma,0,1 GREB1 NM_014668 exon31 c.G5365T p.A1789S TCTGCCGCGGTCG . 48.0 3.0 38.0 0.0 . 308 . . Atlas-SNP NT5C1B 93034 hgsc.bcm.edu hg19 2 18765411 18765411 + Nonsense_Mutation SNP A A T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . NT5C1B NM_001199087 exon6 c.T1065A p.Y355X GAGCTGATACTCC . 187.0 30.0 115.0 0.0 . 72 . . Atlas-SNP HADHB 3032 hgsc.bcm.edu hg19 2 26502110 26502110 + Silent SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . HADHB NM_000183 exon9 c.G738A p.L246L TGCACTGCGCTCT . 92.0 11.0 91.0 0.0 . 50 . . Atlas-SNP PPP1R21 129285 hgsc.bcm.edu hg19 2 48692100 48692100 + Missense_Mutation SNP A A C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . PPP1R21 NM_152994 exon8 c.A719C p.N240T CTCTGAACGTTCC . 291.0 29.0 241.0 0.0 . 47 . . Atlas-SNP PEX13 5194 hgsc.bcm.edu hg19 2 61258830 61258830 + Silent SNP A A G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . PEX13 NM_002618 exon2 c.A369G p.E123E AGCTGAAGAAAGC . 102.0 34.0 91.0 0.0 . 27 . . Atlas-SNP ALMS1 7840 hgsc.bcm.edu hg19 2 73613036 73613036 + Missense_Mutation SNP G G C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ALMS1 NM_015120 exon1 c.G40C p.E14Q CTGGAGGAGGAGG . 168.0 10.0 124.0 0.0 . 384 . . Atlas-SNP DQX1 165545 hgsc.bcm.edu hg19 2 74752644 74752644 + Silent SNP C C T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . DQX1 NM_133637 exon2 c.G213A p.E71E ACCAGGCTCCCCA . 107.0 19.0 79.0 0.0 . 95 . . Atlas-SNP MGAT4A 11320 hgsc.bcm.edu hg19 2 99242216 99242216 + Missense_Mutation SNP C C A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . MGAT4A NM_012214 exon15 c.G1551T p.Q517H AGAATTCTGAATA . 247.0 45.0 285.0 0.0 . 51 . . Atlas-SNP TBC1D8 11138 hgsc.bcm.edu hg19 2 101650198 101650198 + Silent SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . TBC1D8 NM_001102426 exon10 c.A1581G p.S527S AGGGTGTGAGGCA . 109.0 24.0 117.0 0.0 . 169 . . Atlas-SNP RANBP2 5903 hgsc.bcm.edu hg19 2 109384438 109384438 + Silent SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . RANBP2 NM_006267 exon20 c.T7443C p.D2481D GACAGATGTTATT . 131.0 25.0 98.0 0.0 . 488 . . Atlas-SNP SCN2A 6326 hgsc.bcm.edu hg19 2 166243456 166243456 + Silent SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . SCN2A NM_001040143 exon25 c.T4752C p.S1584S GATCTCTCTTCGT . 179.0 18.0 95.0 0.0 . 589 . . Atlas-SNP GALNT3 2591 hgsc.bcm.edu hg19 2 166605296 166605296 + Missense_Mutation SNP C C G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . GALNT3 NM_004482 exon11 c.G1897C p.D633H CTTAATCATTTTG . 85.0 55.0 46.0 0.0 . 65 . . Atlas-SNP GLS 2744 hgsc.bcm.edu hg19 2 191819351 191819351 + Missense_Mutation SNP A A T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . GLS NM_014905 exon16 c.A1754T p.D585V ACTATGATTCTAG . 239.0 42.0 187.0 0.0 . 47 . . Atlas-SNP DNAH7 56171 hgsc.bcm.edu hg19 2 196620956 196620956 + Silent SNP A A G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . DNAH7 NM_018897 exon62 c.T11487C p.N3829N TTTGACATTCAAA . 314.0 47.0 236.0 0.0 . 512 . . Atlas-SNP DNAH7 56171 hgsc.bcm.edu hg19 2 196774843 196774843 + Missense_Mutation SNP T T A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . DNAH7 NM_018897 exon25 c.A4012T p.T1338S CCTTGGTAGTTTC . 125.0 16.0 107.0 0.0 . 512 . . Atlas-SNP PTH2R 5746 hgsc.bcm.edu hg19 2 209353870 209353870 + Missense_Mutation SNP T T A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . PTH2R NM_005048 exon11 c.T1210A p.F404I AACTCCTTTCAGG . 50.0 5.0 46.0 0.0 . 92 . . Atlas-SNP ZNF142 7701 hgsc.bcm.edu hg19 2 219508527 219508527 + Silent SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ZNF142 NM_001105537 exon8 c.A2712G p.S904S GATGGGTGAATCT . 89.0 4.0 60.0 0.0 . 190 . . Atlas-SNP DOCK10 55619 hgsc.bcm.edu hg19 2 225642958 225642958 + Missense_Mutation SNP T T A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . DOCK10 NM_014689 exon51 c.A5699T p.E1900V TTAGGCTCTTTAT . 94.0 12.0 97.0 0.0 . 308 . . Atlas-SNP DOCK10 55619 hgsc.bcm.edu hg19 2 225684228 225684228 + Missense_Mutation SNP C C T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . DOCK10 NM_014689 exon29 c.G3202A p.D1068N CTCGGTCCATAAA . 298.0 54.0 260.0 0.0 . 308 . . Atlas-SNP SH3BP5 9467 hgsc.bcm.edu hg19 3 15300443 15300443 + Missense_Mutation SNP G G C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . SH3BP5 NM_004844 exon7 c.C784G p.R262G TGGAGCGCCGCCG . 77.0 14.0 63.0 0.0 . 32 . . Atlas-SNP UBE2E1 7324 hgsc.bcm.edu hg19 3 23932096 23932096 + Silent SNP A A G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . UBE2E1 NM_003341 exon6 c.A581G p.X194X CTACATAAATTGG . 168.0 47.0 147.0 0.0 . 15 . . Atlas-SNP MLH1 4292 hgsc.bcm.edu hg19 3 37059089 37059089 + Missense_Mutation SNP A A T rs63751598 bycluster TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . MLH1 NM_000249 exon10 c.A883T p.S295C TACCTCAGGTAAT . 96.0 4.0 123.0 0.0 . 226 . . Atlas-SNP SCN10A 6336 hgsc.bcm.edu hg19 3 38739345 38739345 + Missense_Mutation SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . SCN10A NM_006514 exon27 c.A5366G p.D1789G GGCAGGTCCATCT . 80.0 24.0 86.0 0.0 . 359 . . Atlas-SNP ABHD14A 25864 hgsc.bcm.edu hg19 3 52011894 52011894 + Missense_Mutation SNP T T A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ABHD14A NM_015407 exon2 c.T77A p.V26E CTGTGGTACAGAC . 27.0 6.0 44.0 0.0 . 15 . . Atlas-SNP TLR9 54106 hgsc.bcm.edu hg19 3 52255355 52255355 + Missense_Mutation SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . TLR9 NM_017442 exon2 c.C2977T p.L993F AGAGGAGGACACT . 89.0 25.0 113.0 0.0 . 72 . . Atlas-SNP ERC2 26059 hgsc.bcm.edu hg19 3 56468944 56468944 + Missense_Mutation SNP C C A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ERC2 NM_015576 exon2 c.G92T p.R31I CTTGTTCTTCGGT . 70.0 15.0 71.0 0.0 . 221 . . Atlas-SNP POU1F1 5449 hgsc.bcm.edu hg19 3 87313643 87313643 + Silent SNP A A G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . POU1F1 NM_001122757 exon3 c.T312C p.L104L TTTATAAAGACAA . 172.0 29.0 203.0 0.0 . 70 . . Atlas-SNP ABHD10 55347 hgsc.bcm.edu hg19 3 111710309 111710309 + Missense_Mutation SNP T T A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ABHD10 NM_018394 exon5 c.T662A p.F221Y ACAGTTTCATTAA . 162.0 46.0 181.0 0.0 . 20 . . Atlas-SNP CCDC80 151887 hgsc.bcm.edu hg19 3 112357345 112357345 + Missense_Mutation SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . CCDC80 NM_199511 exon2 c.A1408G p.R470G CCCGCCTGTCCAT . 71.0 32.0 91.0 0.0 . 100 . . Atlas-SNP NR1I2 8856 hgsc.bcm.edu hg19 3 119530393 119530393 + Missense_Mutation SNP G G C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . NR1I2 NM_022002 exon4 c.G456C p.M152I GATCATGTCCGAC . 77.0 15.0 96.0 0.0 . 44 . . Atlas-SNP NR1I2 8856 hgsc.bcm.edu hg19 3 119530394 119530394 + Missense_Mutation SNP T T A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . NR1I2 NM_022002 exon4 c.T457A p.S153T ATCATGTCCGACG . 81.0 17.0 99.0 0.0 . 44 . . Atlas-SNP CASR 846 hgsc.bcm.edu hg19 3 122002614 122002614 + Missense_Mutation SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . CASR NM_001178065 exon7 c.T1843C p.F615L ATCGAGTTTCTGT . 72.0 8.0 74.0 0.0 . 190 . . Atlas-SNP CCDC14 64770 hgsc.bcm.edu hg19 3 123674900 123674900 + Silent SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . CCDC14 NM_022757 exon4 c.A366G p.E122E TGAATCTTCATTT . 101.0 11.0 129.0 0.0 . 97 . . Atlas-SNP MSL2 55167 hgsc.bcm.edu hg19 3 135870012 135870012 + Missense_Mutation SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . MSL2 NM_018133 exon2 c.A1711G p.I571V TGTCTATAGCTTC . 104.0 20.0 118.0 0.0 . 63 . . Atlas-SNP MME 4311 hgsc.bcm.edu hg19 3 154878219 154878219 + Missense_Mutation SNP T T A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . MME NM_007287 exon17 c.T1642A p.S548T TACTCTTCAGGAA . 92.0 20.0 102.0 0.0 . 133 . . Atlas-SNP ST6GAL1 6480 hgsc.bcm.edu hg19 3 186790725 186790725 + Missense_Mutation SNP A A G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ST6GAL1 NM_003032 exon5 c.A794G p.D265G ACTCAGATATCCC . 127.0 31.0 130.0 0.0 . 36 . . Atlas-SNP ATP13A5 344905 hgsc.bcm.edu hg19 3 192992998 192992998 + Missense_Mutation SNP G G C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ATP13A5 NM_198505 exon30 c.C3490G p.L1164V CTGCTAGCTTCTT . 83.0 20.0 91.0 0.0 . 171 . . Atlas-SNP COMMD8 54951 hgsc.bcm.edu hg19 4 47465616 47465616 + Missense_Mutation SNP T T A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . COMMD8 NM_017845 exon1 c.A53T p.E18V CCCAGCTCGGCCG . 69.0 13.0 57.0 0.0 . 15 . . Atlas-SNP FAM13A 10144 hgsc.bcm.edu hg19 4 89689194 89689194 + Missense_Mutation SNP T T G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . FAM13A NM_014883 exon12 c.A1475C p.N492T GTGGAATTGAGAC . 134.0 33.0 206.0 0.0 . 181 . . Atlas-SNP FSTL5 56884 hgsc.bcm.edu hg19 4 162307147 162307147 + Missense_Mutation SNP C C T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . FSTL5 NM_020116 exon16 c.G2296A p.V766M AGAGCACATCAGT . 84.0 26.0 145.0 0.0 . 207 . . Atlas-SNP TLR3 7098 hgsc.bcm.edu hg19 4 187004594 187004594 + Missense_Mutation SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . TLR3 NM_003265 exon4 c.T1754C p.L585S AGGATTTATTTGA . 145.0 18.0 177.0 0.0 . 83 . . Atlas-SNP NIPBL 25836 hgsc.bcm.edu hg19 5 36986168 36986168 + Silent SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . NIPBL NM_015384 exon10 c.G2886A p.K962K AATCAAGAGGGAT . 1463.0 280.0 1313.0 2.0 . 513 . . Atlas-SNP LRRC70 100130733 hgsc.bcm.edu hg19 5 61875597 61875597 + Missense_Mutation SNP A A G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . LRRC70 NM_181506 exon2 c.A332G p.Y111C ATCTATATTTTCT . 153.0 20.0 129.0 0.0 . 19 . . Atlas-SNP ZNF366 167465 hgsc.bcm.edu hg19 5 71756336 71756336 + Nonsense_Mutation SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ZNF366 NM_152625 exon2 c.C988T p.Q330X TGTGCTGCATCAT . 44.0 14.0 52.0 0.0 . 108 . . Atlas-SNP LRRTM2 26045 hgsc.bcm.edu hg19 5 138209107 138209107 + Silent SNP A A G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . LRRTM2 NM_015564 exon2 c.T1143C p.Y381Y TTTTGTATATTCA . 99.0 11.0 90.0 0.0 . 42 . . Atlas-SNP UBE2D2 7322 hgsc.bcm.edu hg19 5 138994470 138994470 + Missense_Mutation SNP C C A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . UBE2D2 NM_003339 exon5 c.C223A p.H75N ATTTATCATCCAA . 261.0 136.0 276.0 0.0 . 17 . . Atlas-SNP UBE2D2 7322 hgsc.bcm.edu hg19 5 138994471 138994471 + Missense_Mutation SNP A A T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . UBE2D2 NM_003339 exon5 c.A224T p.H75L TTTATCATCCAAA . 259.0 135.0 273.0 0.0 . 17 . . Atlas-SNP ANKHD1 54882 hgsc.bcm.edu hg19 5 139917018 139917018 + Missense_Mutation SNP G G T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ANKHD1 NM_017747 exon31 c.G7072T p.A2358S GTCAGTGCCAGTC . 137.0 67.0 137.0 0.0 . 233 . . Atlas-SNP PCDHA10 56139 hgsc.bcm.edu hg19 5 140237595 140237595 + Silent SNP C C G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . PCDHA10 NM_031859 exon1 c.C1962G p.G654G CCATGGCGAGCCG . 115.0 23.0 82.0 0.0 . 358 . . Atlas-SNP PCDHGB7 56099 hgsc.bcm.edu hg19 5 140797663 140797663 + Silent SNP G G T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . PCDHGB7 NM_018927 exon1 c.G237T p.A79A AGACGCGCAGAGC . 98.0 37.0 134.0 0.0 . 117 . . Atlas-SNP SPINK5 11005 hgsc.bcm.edu hg19 5 147450013 147450013 + Missense_Mutation SNP T T G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . SPINK5 NM_001127699 exon3 c.T209G p.L70R TGATACTGTGAGT . 301.0 19.0 326.0 0.0 . 245 . . Atlas-SNP FOXI1 2299 hgsc.bcm.edu hg19 5 169533520 169533520 + Missense_Mutation SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . FOXI1 NM_012188 exon1 c.G559A p.D187N CCCCGCGACGAGG . 101.0 31.0 96.0 0.0 . 70 . . Atlas-SNP CDHR2 54825 hgsc.bcm.edu hg19 5 176019770 176019770 + Missense_Mutation SNP C C G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . CDHR2 NM_017675 exon31 c.C3781G p.Q1261E AACAGTCAGGAAA . 112.0 54.0 103.0 0.0 . 152 . . Atlas-SNP TMED9 54732 hgsc.bcm.edu hg19 5 177019635 177019635 + Missense_Mutation SNP G G T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . TMED9 NM_017510 exon2 c.G244T p.G82W ACCCCGGGGCTTG . 223.0 116.0 227.0 0.0 . 18 . . Atlas-SNP N4BP3 23138 hgsc.bcm.edu hg19 5 177547301 177547301 + Silent SNP G G T rs374439291 TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . N4BP3 NM_015111 exon3 c.G453T p.T151T GCACACGCTGGCC . 130.0 24.0 109.0 0.0 . 25 . . Atlas-SNP CLK4 57396 hgsc.bcm.edu hg19 5 178043910 178043910 + Missense_Mutation SNP T T G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . CLK4 NM_020666 exon5 c.A515C p.K172T ACAACTTTGCCAA . 277.0 58.0 280.0 0.0 . 103 . . Atlas-SNP TRIM10 10107 hgsc.bcm.edu hg19 6 30122220 30122220 + Silent SNP G G T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . TRIM10 NM_052828 exon7 c.C972A p.L324L GGACAAGAGGAGC . 50.0 5.0 39.0 0.0 . 65 . . Atlas-SNP ITPR3 3710 hgsc.bcm.edu hg19 6 33652240 33652240 + Missense_Mutation SNP C C T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ITPR3 NM_002224 exon37 c.C5044T p.R1682W GGGGACCGGGTGA . 138.0 11.0 94.0 0.0 . 409 . . Atlas-SNP XPO5 57510 hgsc.bcm.edu hg19 6 43492932 43492932 + Silent SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . XPO5 NM_020750 exon29 c.A3087G p.L1029L TGTAATTAATAGC . 72.0 12.0 70.0 0.0 . 79 . . Atlas-SNP DST 667 hgsc.bcm.edu hg19 6 56342211 56342211 + Missense_Mutation SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . DST NM_015548 exon72 c.A13738G p.I4580V GGCAGATAGCCAA . 99.0 15.0 106.0 0.0 . 1427 . . Atlas-SNP ZNF451 26036 hgsc.bcm.edu hg19 6 57012444 57012444 + Missense_Mutation SNP C C T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ZNF451 NM_001031623 exon10 c.C1561T p.H521Y CGGATTCACGGAG . 144.0 25.0 96.0 0.0 . 181 . . Atlas-SNP RIMS1 22999 hgsc.bcm.edu hg19 6 72967920 72967920 + Missense_Mutation SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . RIMS1 NM_014989 exon17 c.T2863C p.S955P TCAGTATCTCCTC . 69.0 20.0 46.0 0.0 . 278 . . Atlas-SNP COL12A1 1303 hgsc.bcm.edu hg19 6 75843108 75843108 + Missense_Mutation SNP T T A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . COL12A1 NM_004370 exon34 c.A5695T p.I1899F TAAGAATGGCATA . 145.0 41.0 125.0 0.0 . 385 . . Atlas-SNP MYO6 4646 hgsc.bcm.edu hg19 6 76596595 76596595 + Missense_Mutation SNP A A G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . MYO6 NM_004999 exon25 c.A2542G p.K848E CTGAAAAAACGAC . 180.0 26.0 123.0 0.0 . 124 . . Atlas-SNP MYO6 4646 hgsc.bcm.edu hg19 6 76599977 76599977 + Silent SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . MYO6 NM_004999 exon26 c.G2862A p.R954R GGAAAGGCGGATG . 601.0 88.0 501.0 0.0 . 124 . . Atlas-SNP MYCT1 80177 hgsc.bcm.edu hg19 6 153019044 153019044 + Missense_Mutation SNP A A G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . MYCT1 NM_025107 exon1 c.A7G p.T3A ATGCGAACACAAG . 147.0 23.0 146.0 0.0 . 48 . . Atlas-SNP COL28A1 340267 hgsc.bcm.edu hg19 7 7571326 7571326 + Missense_Mutation SNP T T G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . COL28A1 NM_001037763 exon3 c.A334C p.K112Q GGTCCTTCCAGGA . 207.0 44.0 225.0 0.0 . 113 . . Atlas-SNP FAM126A 84668 hgsc.bcm.edu hg19 7 22985357 22985357 + Missense_Mutation SNP C C T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . FAM126A NM_032581 exon11 c.G1417A p.G473R CAGCCCCACAACC . 111.0 30.0 113.0 0.0 . 53 . . Atlas-SNP HNRNPA2B1 3181 hgsc.bcm.edu hg19 7 26232908 26232908 + Silent SNP A A G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed .,2 HNRNPA2B1 NM_031243 exon10 c.T963C p.F321F ACCACCAAAGTTT . 154.0 49.0 67.0 0.0 . 70 . . Atlas-SNP HOXA3 3200 hgsc.bcm.edu hg19 7 27149809 27149809 + Missense_Mutation SNP C C T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . HOXA3 NM_030661 exon2 c.G451A p.V151M TGGCCACTGTGGG . 116.0 15.0 78.0 0.0 . 62 . . Atlas-SNP VPS41 27072 hgsc.bcm.edu hg19 7 38783021 38783021 + Missense_Mutation SNP T T G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . VPS41 NM_014396 exon24 c.A2103C p.L701F GGAATATAAAATC . 162.0 15.0 84.0 0.0 . 102 . . Atlas-SNP SEMA3E 9723 hgsc.bcm.edu hg19 7 83037794 83037794 + Nonsense_Mutation SNP A A T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . SEMA3E NM_012431 exon6 c.T560A p.L187X GCAAACAATTCAC . 125.0 23.0 104.0 0.0 . 125 . . Atlas-SNP ASB4 51666 hgsc.bcm.edu hg19 7 95125087 95125087 + Missense_Mutation SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ASB4 NM_016116 exon2 c.T205C p.Y69H CCTAGCTATAAAT . 115.0 19.0 109.0 0.0 . 52 . . Atlas-SNP ACTL6B 51412 hgsc.bcm.edu hg19 7 100246398 100246398 + Silent SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ACTL6B NM_016188 exon6 c.C516T p.T172T GGTGTGGGTGGCT . 88.0 16.0 69.0 0.0 . 47 . . Atlas-SNP ORC5 5001 hgsc.bcm.edu hg19 7 103801580 103801580 + Silent SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ORC5 NM_002553 exon12 c.A1089G p.L363L TATTGCTAATAAT . 121.0 25.0 113.0 0.0 . 48 . . Atlas-SNP CADPS2 93664 hgsc.bcm.edu hg19 7 121985695 121985695 + Missense_Mutation SNP A A T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . CADPS2 NM_001167940 exon28 c.T3557A p.V1186D TGCCGAACAAACA . 56.0 11.0 63.0 0.0 . 116 . . Atlas-SNP GRM8 2918 hgsc.bcm.edu hg19 7 126883030 126883030 + Missense_Mutation SNP C C T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . GRM8 NM_000845 exon1 c.G229A p.E77K TGGCCTCCAGTCT . 89.0 26.0 110.0 0.0 . 377 . . Atlas-SNP MKLN1 4289 hgsc.bcm.edu hg19 7 131113817 131113817 + Nonsense_Mutation SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . MKLN1 NM_013255 exon9 c.G873A p.W291X TGGCTGGGATGGA . 104.0 28.0 103.0 0.0 . 67 . . Atlas-SNP PODXL 5420 hgsc.bcm.edu hg19 7 131241029 131241029 + Silent SNP G G C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . PODXL NM_001018111 exon1 c.C90G p.P30P CTGGGAGGGCGAC . 93.0 7.0 86.0 0.0 . 53 . . Atlas-SNP DOCK5 80005 hgsc.bcm.edu hg19 8 25154121 25154121 + Missense_Mutation SNP A A T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . DOCK5 NM_024940 exon7 c.A563T p.E188V CCCATGAGGTGGC . 83.0 19.0 127.0 0.0 . 167 . . Atlas-SNP ADAM18 8749 hgsc.bcm.edu hg19 8 39564351 39564351 + Silent SNP A A C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ADAM18 NM_014237 exon18 c.A1945C p.R649R GGACATAGACCTC . 63.0 38.0 132.0 0.0 . 169 . . Atlas-SNP VCPIP1 80124 hgsc.bcm.edu hg19 8 67547274 67547274 + Missense_Mutation SNP C C T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . VCPIP1 NM_025054 exon3 c.G3131A p.R1044K CTAGCTCTTGGAT . 73.0 20.0 88.0 0.0 . 110 . . Atlas-SNP TERF1 7013 hgsc.bcm.edu hg19 8 73958317 73958317 + Missense_Mutation SNP A A G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . TERF1 NM_017489 exon10 c.A1265G p.D422G TAAAAGACAGATG . 456.0 220.0 287.0 0.0 . 48 . . Atlas-SNP NBN 4683 hgsc.bcm.edu hg19 8 90996753 90996753 + Nonsense_Mutation SNP C C A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . NBN NM_002485 exon1 c.G37T p.G13X CCTTACCTCCTGC . 611.0 74.0 382.0 0.0 . 86 . . Atlas-SNP RUNX1T1 862 hgsc.bcm.edu hg19 8 93026961 93026961 + Missense_Mutation SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed .,3 RUNX1T1 NM_001198679 exon4 c.C491T p.S164F GAGGAGGAAGAAG . 123.0 22.0 89.0 0.0 . 516 . . Atlas-SNP RUNX1T1 862 hgsc.bcm.edu hg19 8 93088272 93088272 + Silent SNP A A T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . RUNX1T1 NM_001198628 exon2 c.T9A p.S3S TTTGACAGATATC . 79.0 9.0 43.0 0.0 . 516 . . Atlas-SNP VPS13B 157680 hgsc.bcm.edu hg19 8 100115264 100115264 + Missense_Mutation SNP G G T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . VPS13B NM_152564 exon5 c.G496T p.D166Y GAAGATGATATCG . 254.0 19.0 159.0 0.0 . 811 . . Atlas-SNP VPS13B 157680 hgsc.bcm.edu hg19 8 100874106 100874106 + Missense_Mutation SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . VPS13B NM_017890 exon58 c.G11222A p.R3741Q GGCGGCGGCAGCT . 157.0 30.0 79.0 0.0 . 811 . . Atlas-SNP SLC25A32 81034 hgsc.bcm.edu hg19 8 104415433 104415433 + Missense_Mutation SNP C C G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . SLC25A32 NM_030780 exon4 c.G511C p.V171L TTTTCACAAGTGT . 152.0 14.0 85.0 0.0 . 36 . . Atlas-SNP ANGPT1 284 hgsc.bcm.edu hg19 8 108296966 108296966 + Missense_Mutation SNP G G C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ANGPT1 NM_001146 exon7 c.C1149G p.N383K GGCTCGGTTCCCT . 177.0 9.0 136.0 0.0 . 111 . . Atlas-SNP EBAG9 9166 hgsc.bcm.edu hg19 8 110567069 110567069 + Missense_Mutation SNP C C A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . EBAG9 NM_004215 exon4 c.C274A p.P92T CTGGAACCTGACT . 178.0 52.0 117.0 0.0 . 23 . . Atlas-SNP RLN1 6013 hgsc.bcm.edu hg19 9 5335511 5335511 + Missense_Mutation SNP C C T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . RLN1 NM_006911 exon2 c.G298A p.A100T GGGCTGCCTTCAG . 82.0 6.0 72.0 0.0 . 16 . . Atlas-SNP KIAA2026 158358 hgsc.bcm.edu hg19 9 5920853 5920853 + Missense_Mutation SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . KIAA2026 NM_001017969 exon8 c.A5143G p.T1715A GTCCTGTTTTCAC . 97.0 10.0 111.0 0.0 . 231 . . Atlas-SNP TRPM6 140803 hgsc.bcm.edu hg19 9 77386661 77386661 + Missense_Mutation SNP A A G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . TRPM6 NM_017662 exon25 c.T3494C p.V1165A CAATTCACATCTT . 25.0 16.0 55.0 0.0 . 377 . . Atlas-SNP TEX10 54881 hgsc.bcm.edu hg19 9 103092453 103092453 + Splice_Site SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . TEX10 NM_001161584 exon7 c.1260-2A>G . TGATGCTAGAAAC . 37.0 15.0 76.0 0.0 . 99 . . Atlas-SNP GOLGA1 2800 hgsc.bcm.edu hg19 9 127685404 127685404 + Missense_Mutation SNP C C A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . GOLGA1 NM_002077 exon8 c.G531T p.Q177H CTGCTGCTGGAAC . 20.0 9.0 34.0 0.0 . 60 . . Atlas-SNP ADARB2 105 hgsc.bcm.edu hg19 10 1313165 1313165 + Missense_Mutation SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ADARB2 NM_018702 exon4 c.A1177G p.I393V TGACGATTCCTGC . 75.0 18.0 67.0 0.0 . 95 . . Atlas-SNP ASB13 79754 hgsc.bcm.edu hg19 10 5683744 5683744 + Missense_Mutation SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ASB13 NM_024701 exon5 c.A698G p.E233G TAGTACTCGAAGC . 83.0 16.0 60.0 0.0 . 26 . . Atlas-SNP ITGA8 8516 hgsc.bcm.edu hg19 10 15573079 15573079 + Silent SNP C C T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ITGA8 NM_003638 exon28 c.G2952A p.Q984Q TGCTGGCTGATCT . 188.0 31.0 200.0 0.0 . 230 . . Atlas-SNP GAD2 2572 hgsc.bcm.edu hg19 10 26513476 26513476 + Missense_Mutation SNP A A T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . GAD2 NM_000818 exon6 c.A620T p.Y207F TCACCTATGAAAT . 146.0 29.0 115.0 0.0 . 116 . . Atlas-SNP CCDC6 8030 hgsc.bcm.edu hg19 10 61566806 61566806 + Missense_Mutation SNP T T A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . CCDC6 NM_005436 exon6 c.A878T p.E293V CGTTCCTCCTCCA . 66.0 16.0 64.0 0.0 . 44 . . Atlas-SNP CYP17A1 1586 hgsc.bcm.edu hg19 10 104595084 104595084 + Nonsense_Mutation SNP C C T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . CYP17A1 NM_000102 exon2 c.G363A p.W121X CAGCTGCCAGTGT . 74.0 28.0 55.0 0.0 . 48 . . Atlas-SNP PDCD11 22984 hgsc.bcm.edu hg19 10 105165833 105165833 + Missense_Mutation SNP A A T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . PDCD11 NM_014976 exon6 c.A656T p.K219I TGCTGAAAGCCCA . 129.0 28.0 113.0 0.0 . 160 . . Atlas-SNP NRAP 4892 hgsc.bcm.edu hg19 10 115372164 115372164 + Silent SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . NRAP NM_001261463 exon30 c.C3327T p.H1109H CTTTGAGTGTTCA . 114.0 26.0 98.0 0.0 . 208 . . Atlas-SNP DMBT1 1755 hgsc.bcm.edu hg19 10 124358530 124358530 + Missense_Mutation SNP A A G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . DMBT1 NM_007329 exon26 c.A3197G p.E1066G GACACGAGTCTTA . 100.0 24.0 100.0 0.0 . 677 . . Atlas-SNP MUC5B 727897 hgsc.bcm.edu hg19 11 1271184 1271184 + Silent SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . MUC5B NM_002458 exon31 c.G13074A p.E4358E TCCGGAGACCACC . 70.0 21.0 129.0 0.0 . 473 . . Atlas-SNP SOX6 55553 hgsc.bcm.edu hg19 11 16077382 16077382 + Silent SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . SOX6 NM_001145819 exon10 c.A1206G p.P402P TGGCTGTGGAGTT . 29.0 14.0 68.0 0.0 . 149 . . Atlas-SNP OR5T2 219464 hgsc.bcm.edu hg19 11 55999752 55999752 + Missense_Mutation SNP T T A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . OR5T2 NM_001004746 exon1 c.A910T p.S304C CATAGCTGGAACT . 99.0 21.0 112.0 0.0 . 107 . . Atlas-SNP OR8K1 390157 hgsc.bcm.edu hg19 11 56114330 56114330 + Silent SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . OR8K1 NM_001002907 exon1 c.T816C p.H272H CAGTCATACTTTG . 81.0 16.0 101.0 0.0 . 93 . . Atlas-SNP OR8U1 219417 hgsc.bcm.edu hg19 11 56143186 56143186 + Silent SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . OR8U1 NM_001005204 exon1 c.G87A p.V29V CTTTGTGCTATTC . 74.0 12.0 67.0 0.0 . 59 . . Atlas-SNP OR9Q1 219956 hgsc.bcm.edu hg19 11 57946997 57946997 + Silent SNP C C T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . OR9Q1 NM_001005212 exon3 c.C81T p.L27L CCCTCTCTTCCTC . 65.0 7.0 97.0 0.0 . 60 . . Atlas-SNP CABP4 57010 hgsc.bcm.edu hg19 11 67222916 67222916 + Missense_Mutation SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . CABP4 NM_145200 exon1 c.G22A p.G8R GCAAGGGGGCAGC . 48.0 6.0 67.0 0.0 . 33 . . Atlas-SNP WNT11 7481 hgsc.bcm.edu hg19 11 75905679 75905679 + Nonsense_Mutation SNP T T A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . WNT11 NM_004626 exon3 c.A529T p.K177X TCACCTTCATAGG . 94.0 24.0 94.0 0.0 . 44 . . Atlas-SNP ALG9 79796 hgsc.bcm.edu hg19 11 111742145 111742145 + Missense_Mutation SNP C C G rs200786242 TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ALG9 NM_001077690 exon2 c.G61C p.A21P CCGGGGCGCGTAT . 625.0 39.0 667.0 0.0 . 77 . . Atlas-SNP PCSK7 9159 hgsc.bcm.edu hg19 11 117100406 117100406 + Missense_Mutation SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed PCSK7,NS,carcinoma,0,1 PCSK7 NM_004716 exon3 c.C155T p.P52L CAGCTCGGCCCCC . 110.0 22.0 114.0 1.0 . 59 . . Atlas-SNP OR6M1 390261 hgsc.bcm.edu hg19 11 123676433 123676433 + Missense_Mutation SNP C C A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . OR6M1 NM_001005325 exon1 c.G625T p.A209S TGAATGCCAGGGA . 66.0 7.0 87.0 0.0 . 60 . . Atlas-SNP OR8G5 219865 hgsc.bcm.edu hg19 11 124135129 124135129 + Missense_Mutation SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . . NM_001005198 exon1 c.T407C p.L136P CTCAGCTCTACTT . 58.0 11.0 55.0 0.0 . . . . Atlas-SNP PKP2 5318 hgsc.bcm.edu hg19 12 33030888 33030888 + Missense_Mutation SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . PKP2 NM_004572 exon3 c.C926T p.A309V TCCACGGCGACAC . 33.0 9.0 48.0 0.0 . 110 . . Atlas-SNP KIF21A 55605 hgsc.bcm.edu hg19 12 39756972 39756972 + Missense_Mutation SNP T T A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . KIF21A NM_001173463 exon7 c.A947T p.K316M GCCCTCTTGCTCT . 80.0 16.0 64.0 0.0 . 238 . . Atlas-SNP PPM1H 57460 hgsc.bcm.edu hg19 12 63328293 63328293 + Missense_Mutation SNP G G C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . PPM1H NM_020700 exon1 c.C224G p.P75R GCCCAGGGCAGCC . 81.0 20.0 109.0 0.0 . 42 . . Atlas-SNP UTP20 27340 hgsc.bcm.edu hg19 12 101764273 101764273 + Missense_Mutation SNP C C G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . UTP20 NM_014503 exon50 c.C6619G p.L2207V CAAGTTCTACTGG . 87.0 11.0 73.0 0.0 . 222 . . Atlas-SNP NOS1 4842 hgsc.bcm.edu hg19 12 117768235 117768235 + Missense_Mutation SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . NOS1 NM_000620 exon2 c.A640G p.S214G GAAGGCTCAGCAC . 64.0 11.0 41.0 0.0 . 240 . . Atlas-SNP MAB21L1 4081 hgsc.bcm.edu hg19 13 36049724 36049724 + Silent SNP A A T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . MAB21L1 NM_005584 exon1 c.T552A p.A184A GTGGGCAGCACTC . 48.0 11.0 68.0 0.0 . 52 . . Atlas-SNP DCLK1 9201 hgsc.bcm.edu hg19 13 36385016 36385016 + Silent SNP A A G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . DCLK1 NM_004734 exon12 c.T1644C p.C548C GGTGCCACAGACT . 67.0 15.0 81.0 0.0 . 350 . . Atlas-SNP ZC3H13 23091 hgsc.bcm.edu hg19 13 46542149 46542149 + Nonsense_Mutation SNP T T A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ZC3H13 NM_015070 exon15 c.A3811T p.R1271X GGCTTCTTGAATC . 56.0 12.0 74.0 0.0 . 197 . . Atlas-SNP SAMD4A 23034 hgsc.bcm.edu hg19 14 55215638 55215638 + Missense_Mutation SNP C C G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed SAMD4A,colon,carcinoma,0,2 SAMD4A NM_015589 exon4 c.C1085G p.A362G TGGAGGCGCAGGT . 65.0 26.0 82.0 0.0 . 68 . . Atlas-SNP NUMB 8650 hgsc.bcm.edu hg19 14 73750978 73750978 + Nonsense_Mutation SNP C C A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . NUMB NM_001005744 exon10 c.G760T p.E254X TCATCTCCAGAGA . 114.0 53.0 159.0 0.0 . 56 . . Atlas-SNP ASB2 51676 hgsc.bcm.edu hg19 14 94423206 94423206 + Missense_Mutation SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ASB2 NM_001202429 exon3 c.C217T p.P73S CAGGAGGTGCAGT . 93.0 15.0 112.0 0.0 . 71 . . Atlas-SNP C15orf53 400359 hgsc.bcm.edu hg19 15 38990484 38990484 + Missense_Mutation SNP A A C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . C15orf53 NM_207444 exon2 c.A278C p.H93P CAGCTCATGTCTT . 83.0 19.0 110.0 0.0 . 12 . . Atlas-SNP SPTBN5 51332 hgsc.bcm.edu hg19 15 42150939 42150939 + Missense_Mutation SNP G G A rs372953121 TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . SPTBN5 NM_016642 exon49 c.C7982T p.A2661V AGCCACGCAGCCA . 65.0 15.0 58.0 0.0 . 171 . . Atlas-SNP DMXL2 23312 hgsc.bcm.edu hg19 15 51772972 51772972 + Missense_Mutation SNP C C G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed DMXL2,bladder,carcinoma,0,1 DMXL2 NM_001174116 exon24 c.G6331C p.D2111H CCTGATCCAGCAG . 164.0 13.0 101.0 1.0 . 262 . . Atlas-SNP PSTPIP1 9051 hgsc.bcm.edu hg19 15 77320208 77320208 + Missense_Mutation SNP G G T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . PSTPIP1 NM_003978 exon6 c.G370T p.D124Y GTCATGGACCGGG . 352.0 121.0 282.0 0.0 . 50 . . Atlas-SNP CTSH 1512 hgsc.bcm.edu hg19 15 79223830 79223830 + Missense_Mutation SNP C C T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . CTSH NM_004390 exon7 c.G511A p.D171N CGCAGTCCACCAG . 73.0 27.0 80.0 0.0 . 23 . . Atlas-SNP TMC3 342125 hgsc.bcm.edu hg19 15 81628988 81628988 + Missense_Mutation SNP C C G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . TMC3 NM_001080532 exon20 c.G2165C p.R722T TCTGATCTTGCCT . 89.0 17.0 52.0 0.0 . 112 . . Atlas-SNP AGBL1 123624 hgsc.bcm.edu hg19 15 87097621 87097621 + Silent SNP A A G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . AGBL1 NM_152336 exon20 c.A2709G p.A903A GCTAGCACCAGCA . 111.0 21.0 99.0 0.0 . 151 . . Atlas-SNP DET1 55070 hgsc.bcm.edu hg19 15 89074816 89074816 + Missense_Mutation SNP C C T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . DET1 NM_017996 exon3 c.G154A p.V52M GGAACACTCGGAC . 182.0 17.0 134.0 0.0 . 55 . . Atlas-SNP MFGE8 4240 hgsc.bcm.edu hg19 15 89453089 89453089 + Missense_Mutation SNP C C G rs148213281 TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . MFGE8 NM_001114614 exon2 c.G139C p.G47R CATCTCCTCGCAC . 190.0 23.0 168.0 0.0 . 60 . C|1.000;G|0.000 Atlas-SNP BLM 641 hgsc.bcm.edu hg19 15 91293034 91293034 + Missense_Mutation SNP G G T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . BLM NM_000057 exon3 c.G536T p.R179I TTGTAAGAGTAAG . 189.0 22.0 142.0 0.0 . 122 . . Atlas-SNP N4BP1 9683 hgsc.bcm.edu hg19 16 48576816 48576816 + Missense_Mutation SNP C C A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . N4BP1 NM_153029 exon7 c.G2690T p.X897L AATCTTCAATCCA . 51.0 26.0 71.0 0.0 . 121 . . Atlas-SNP ZFHX3 463 hgsc.bcm.edu hg19 16 72991690 72991690 + Silent SNP A A G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ZFHX3 NM_006885 exon2 c.T2355C p.N785N ACTGATATTGGCT . 38.0 13.0 35.0 0.0 . 404 . . Atlas-SNP ZNF469 84627 hgsc.bcm.edu hg19 16 88502399 88502399 + Missense_Mutation SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ZNF469 NM_001127464 exon2 c.G8437A p.A2813T CCTGATGCCTCTG . 32.0 8.0 40.0 0.0 . 121 . . Atlas-SNP RNMTL1 55178 hgsc.bcm.edu hg19 17 695150 695150 + Silent SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . RNMTL1 NM_018146 exon4 c.G1104A p.Q368Q CCTGCAGCTGGCC . 94.0 5.0 62.0 0.0 . 25 . . Atlas-SNP NUP88 4927 hgsc.bcm.edu hg19 17 5312086 5312086 + Missense_Mutation SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . NUP88 NM_002532 exon5 c.A824G p.E275G AAAGTCTCTCCAT . 106.0 17.0 84.0 0.0 . 47 . . Atlas-SNP ARHGEF15 22899 hgsc.bcm.edu hg19 17 8215455 8215455 + Missense_Mutation SNP C C T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ARHGEF15 NM_025014 exon2 c.C98T p.S33F CCCAGTCCCCAGG . 202.0 73.0 174.0 0.0 . 97 . . Atlas-SNP NDEL1 81565 hgsc.bcm.edu hg19 17 8363472 8363472 + Missense_Mutation SNP A A T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . NDEL1 NM_001025579 exon8 c.A938T p.D313V TCTTCGACAAAGG . 142.0 14.0 150.0 0.0 . 47 . . Atlas-SNP PSME3 10197 hgsc.bcm.edu hg19 17 40989684 40989684 + Missense_Mutation SNP A A T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . PSME3 NM_001267045 exon7 c.A295T p.R99W AAGCGAAGGTTGG . 149.0 25.0 127.0 0.0 . 11 . . Atlas-SNP TBX4 9496 hgsc.bcm.edu hg19 17 59560478 59560478 + Silent SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . TBX4 NM_018488 exon8 c.T1239C p.P413P CCCACCTCCGCTG . 91.0 27.0 62.0 0.0 . 69 . . Atlas-SNP FASN 2194 hgsc.bcm.edu hg19 17 80043416 80043416 + Missense_Mutation SNP T T A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . FASN NM_004104 exon23 c.A4064T p.D1355V ACGATGTCCCCGA . 251.0 32.0 198.0 0.0 . 154 . . Atlas-SNP CD7 924 hgsc.bcm.edu hg19 17 80274230 80274230 + Silent SNP G G T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . CD7 NM_006137 exon3 c.C453A p.A151A AGGGAGGGCAGAG . 100.0 13.0 79.0 0.0 . 25 . . Atlas-SNP LAMA1 284217 hgsc.bcm.edu hg19 18 7080342 7080342 + Missense_Mutation SNP C C T rs375547281 TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed LAMA1,colon,carcinoma,0,1 LAMA1 NM_005559 exon2 c.G176A p.R59Q ACGGGCCGACCTG . 183.0 39.0 202.0 0.0 . 458 . . Atlas-SNP ZCCHC2 54877 hgsc.bcm.edu hg19 18 60242385 60242385 + Missense_Mutation SNP A A T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ZCCHC2 NM_017742 exon13 c.A3071T p.N1024I GGACCAATGGAAA . 71.0 20.0 79.0 0.0 . 64 . . Atlas-SNP MUC16 94025 hgsc.bcm.edu hg19 19 9076752 9076752 + Missense_Mutation SNP T T A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . MUC16 NM_024690 exon3 c.A10694T p.D3565V GTGCTGTCCATGG . 160.0 28.0 181.0 0.0 . 4315 . . Atlas-SNP MUC16 94025 hgsc.bcm.edu hg19 19 9083709 9083709 + Silent SNP T T G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . MUC16 NM_024690 exon1 c.A8106C p.V2702V GTTACTTACTGTC . 87.0 4.0 59.0 0.0 . 4315 . . Atlas-SNP PDE4C 5143 hgsc.bcm.edu hg19 19 18327687 18327687 + Missense_Mutation SNP A A G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . PDE4C NM_000923 exon13 c.T1349C p.M450T TTGTACATAAGCG . 76.0 34.0 68.0 0.0 . 80 . . Atlas-SNP COMP 1311 hgsc.bcm.edu hg19 19 18896571 18896571 + Missense_Mutation SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . COMP NM_000095 exon14 c.C1580T p.T527M GTGAGCGTGACTT . 52.0 5.0 45.0 0.0 . 62 . . Atlas-SNP C19orf55 148137 hgsc.bcm.edu hg19 19 36256011 36256011 + Missense_Mutation SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . C19orf55 NM_001039887 exon7 c.G703A p.G235S TCTGATGGCCTCT . 46.0 12.0 56.0 0.0 . 39 . . Atlas-SNP WDR62 284403 hgsc.bcm.edu hg19 19 36592199 36592199 + Missense_Mutation SNP A A T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . WDR62 NM_173636 exon24 c.A2951T p.K984M GCCCAAAGGACCA . 194.0 44.0 161.0 0.0 . 102 . . Atlas-SNP ZNF585B 92285 hgsc.bcm.edu hg19 19 37678065 37678065 + Missense_Mutation SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ZNF585B NM_152279 exon5 c.C374T p.S125F TCCCCAGAATAAA . 104.0 35.0 87.0 0.0 . 91 . . Atlas-SNP WDR87 83889 hgsc.bcm.edu hg19 19 38377640 38377640 + Missense_Mutation SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . WDR87 NM_031951 exon6 c.A6554G p.E2185G TCTTCTTCTATTC . 99.0 22.0 89.0 0.0 . 191 . . Atlas-SNP WDR87 83889 hgsc.bcm.edu hg19 19 38380578 38380578 + Missense_Mutation SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . WDR87 NM_031951 exon6 c.A3616G p.T1206A GTGTAGTTTCCTC . 81.0 12.0 94.0 0.0 . 191 . . Atlas-SNP RYR1 6261 hgsc.bcm.edu hg19 19 39075613 39075613 + Missense_Mutation SNP C C T rs118192150 bycluster TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . RYR1 NM_000540 exon102 c.C14677T p.R4893W GGTGTCCGGGCTG . 155.0 55.0 129.0 0.0 . 708 . . Atlas-SNP GMFG 9535 hgsc.bcm.edu hg19 19 39819668 39819668 + Missense_Mutation SNP C C T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . GMFG NM_004877 exon6 c.G329A p.R110K ACCAGCCTGTTTT . 47.0 9.0 55.0 0.0 . 16 . . Atlas-SNP ZNF526 116115 hgsc.bcm.edu hg19 19 42729783 42729783 + Missense_Mutation SNP G G T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ZNF526 NM_133444 exon3 c.G1228T p.A410S ACTCACGCCGGCA . 153.0 35.0 145.0 0.0 . 51 . . Atlas-SNP ARHGAP35 2909 hgsc.bcm.edu hg19 19 47423310 47423310 + Missense_Mutation SNP A A G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . . NM_004491 exon1 c.A1378G p.M460V TTTATTATGAATG . 118.0 18.0 102.0 0.0 . . . . Atlas-SNP EHD2 30846 hgsc.bcm.edu hg19 19 48239730 48239730 + Silent SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed EHD2,NS,carcinoma,0,1 EHD2 NM_014601 exon5 c.G1020A p.A340A CTTTGCGAAGATT . 124.0 19.0 117.0 0.0 . 59 . . Atlas-SNP LILRB5 10990 hgsc.bcm.edu hg19 19 54759241 54759241 + Missense_Mutation SNP C C G rs146167320 bycluster TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . LILRB5 NM_001081442 exon5 c.G860C p.R287P TGGGAGCGGCTCA . 149.0 7.0 149.0 0.0 . 176 . C|0.999;G|0.001 Atlas-SNP LILRB1 10859 hgsc.bcm.edu hg19 19 55144168 55144168 + Silent SNP C C T rs377724258 TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . LILRB1 NM_001081637 exon6 c.C915T p.S305S CTCCTCCGAGTGG . 98.0 7.0 103.0 0.0 . 140 . . Atlas-SNP PPP6R1 22870 hgsc.bcm.edu hg19 19 55743228 55743228 + Missense_Mutation SNP G G C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . PPP6R1 NM_014931 exon19 c.C2248G p.Q750E GGCCCTGGGGCAC . 66.0 22.0 49.0 0.0 . 63 . . Atlas-SNP TMC2 117532 hgsc.bcm.edu hg19 20 2593864 2593864 + Missense_Mutation SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . TMC2 NM_080751 exon14 c.G1768A p.D590N GTGTCTGACATGC . 123.0 42.0 83.0 0.0 . 121 . . Atlas-SNP FERMT1 55612 hgsc.bcm.edu hg19 20 6100146 6100146 + Missense_Mutation SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . FERMT1 NM_017671 exon2 c.A56G p.D19G GGATGGTCAACGC . 136.0 24.0 96.0 0.0 . 106 . . Atlas-SNP ID1 3397 hgsc.bcm.edu hg19 20 30193892 30193892 + Missense_Mutation SNP C C A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ID1 NM_002165 exon2 c.C463A p.R155S TTGTGTCGCTGAA . 66.0 18.0 35.0 0.0 . 12 . . Atlas-SNP PLCG1 5335 hgsc.bcm.edu hg19 20 39802780 39802780 + Missense_Mutation SNP T T G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . PLCG1 NM_002660 exon31 c.T3662G p.L1221R GTGACCTCAGTCC . 64.0 29.0 39.0 0.0 . 111 . . Atlas-SNP TPTE 7179 hgsc.bcm.edu hg19 21 10933910 10933910 + Missense_Mutation SNP A A C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . TPTE NM_199261 exon17 c.T969G p.N323K CCACTCATTTACT . 1005.0 73.0 946.0 0.0 . 513 . . Atlas-SNP TMPRSS15 5651 hgsc.bcm.edu hg19 21 19715849 19715849 + Missense_Mutation SNP T T A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . TMPRSS15 NM_002772 exon12 c.A1402T p.T468S TTAGGGTTACTTG . 228.0 77.0 182.0 0.0 . 189 . . Atlas-SNP NCAM2 4685 hgsc.bcm.edu hg19 21 22906918 22906918 + Missense_Mutation SNP T T A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . NCAM2 NM_004540 exon17 c.T2343A p.N781K TACTAATCACGAA . 127.0 52.0 147.0 0.0 . 220 . . Atlas-SNP HUNK 30811 hgsc.bcm.edu hg19 21 33370991 33370991 + Missense_Mutation SNP A A T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . HUNK NM_014586 exon11 c.A1639T p.I547F ACTGGCATCCCCC . 83.0 27.0 96.0 0.0 . 74 . . Atlas-SNP DYRK1A 1859 hgsc.bcm.edu hg19 21 38850602 38850602 + Missense_Mutation SNP G G C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . DYRK1A NM_001396 exon3 c.G327C p.E109D TAATGAGGTAAGA . 71.0 13.0 94.0 0.0 . 85 . . Atlas-SNP HSF2BP 11077 hgsc.bcm.edu hg19 21 45076519 45076519 + Silent SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . HSF2BP NM_007031 exon3 c.C136T p.L46L CATTTAGTATTCT . 86.0 29.0 102.0 0.0 . 28 . . Atlas-SNP KRTAP10-9 386676 hgsc.bcm.edu hg19 21 46047944 46047944 + Missense_Mutation SNP T T A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . KRTAP10-9 NM_198690 exon1 c.T856A p.S286T TTCTCCTCAGGCC . 50.0 9.0 55.0 0.0 . 24 . . Atlas-SNP SPATC1L 84221 hgsc.bcm.edu hg19 21 47602716 47602716 + Silent SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . . NM_001142854 exon2 c.C15T p.G5G CAGCTCGCCGCCT . 48.0 8.0 71.0 0.0 . . . . Atlas-SNP GAB4 128954 hgsc.bcm.edu hg19 22 17472883 17472883 + Missense_Mutation SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . GAB4 NM_001037814 exon2 c.A358G p.M120V CAAACATATAGCC . 110.0 19.0 112.0 0.0 . 95 . . Atlas-SNP PES1 23481 hgsc.bcm.edu hg19 22 30977601 30977601 + Missense_Mutation SNP C C G novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . PES1 NM_014303 exon7 c.G661C p.A221P AGGTGGCCATGAC . 82.0 16.0 75.0 0.0 . 55 . . Atlas-SNP TAB3 257397 hgsc.bcm.edu hg19 X 30871043 30871043 + Missense_Mutation SNP T T C novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . TAB3 NM_152787 exon7 c.A1562G p.H521R CGTTGATGTAACA . 15.0 8.0 17.0 0.0 . 82 . . Atlas-SNP CHM 1121 hgsc.bcm.edu hg19 X 85218702 85218702 + Missense_Mutation SNP C C A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . CHM NM_000390 exon5 c.G670T p.G224C TCCTGCCTTCTTT . 31.0 12.0 33.0 0.0 . 57 . . Atlas-SNP CETN2 1069 hgsc.bcm.edu hg19 X 151997125 151997125 + Missense_Mutation SNP C C T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . CETN2 NM_004344 exon4 c.G385A p.V129M TGGCCACGCGTTT . 107.0 36.0 105.0 0.0 . 23 . . Atlas-SNP ND1 10625 hgsc.bcm.edu hg19 MT 3427 3427 + Missense_Mutation SNP G G A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . . ENST00000361390 exon1 c.G121A p.G41S GTTGTAGGCCCCT . 21.0 21.0 35.0 0.0 . . . . Atlas-SNP SIK2 23235 hgsc.bcm.edu hg19 11 111591239 111591239 + Frame_Shift_Del DEL C C - novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . SIK2 NM_015191 exon11 c.1532delA p.D511fs . . 56.0 11.0 108.0 0.0 . 89 . . Atlas-INDEL KIAA2026 158358 hgsc.bcm.edu hg19 9 5968486 5968487 + Frame_Shift_Ins INS - - T novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 - - . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . KIAA2026 NM_001017969 exon3 c.1745_1746insA p.T582fs . . 62.0 22.0 57.0 0.0 . 231 . . Atlas-INDEL AXIN1 8312 hgsc.bcm.edu hg19 16 348025 348025 + Frame_Shift_Del DEL G G - novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . AXIN1 NM_003502 exon6 c.1482delG p.P494fs . . 31.0 14.0 35.0 0.0 . 290 . . Atlas-INDEL KRTAP25-1 100131902 hgsc.bcm.edu hg19 21 31661779 31661780 + Frame_Shift_Ins INS - - A novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 - - . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed .,1 KRTAP25-1 NM_001128598 exon1 c.30_31insT p.F10fs . . 109.0 17.0 127.0 0.0 . 13 . . Atlas-INDEL ZCCHC2 54877 hgsc.bcm.edu hg19 18 60217605 60217618 + Frame_Shift_Del DEL ACTTTTGACAAGAC ACTTTTGACAAGAC - novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 ACTTTTGACAAGAC ACTTTTGACAAGAC . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . ZCCHC2 NM_017742 exon5 c.1224_1237del p.408_413del . . 72.0 12.0 117.0 0.0 . 64 . . Atlas-INDEL MAML2 84441 hgsc.bcm.edu hg19 11 95712390 95712391 + Frame_Shift_Del DEL AC AC - novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 AC AC . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . MAML2 NM_032427 exon5 c.3193_3194del p.1065_1065del . . 65.0 17.0 64.0 0.0 . 94 . . Atlas-INDEL RYR3 6263 hgsc.bcm.edu hg19 15 33835899 33835902 + Frame_Shift_Del DEL GAAT GAAT - novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 GAAT GAAT . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . RYR3 NM_001243996 exon8 c.722_725del p.241_242del . . 92.0 25.0 114.0 0.0 . 760 . . Atlas-INDEL SETD2 29072 hgsc.bcm.edu hg19 3 47161750 47161751 + Frame_Shift_Ins INS - - CCATT novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 - - . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . SETD2 NM_014159 exon3 c.4376_4377insAATGG p.R1459fs . . 81.0 18.0 88.0 0.0 . 721 . . Atlas-INDEL GP1BA 2811 hgsc.bcm.edu hg19 17 4837179 4837190 + In_Frame_Del DEL CCTCAGAGCCCG CCTCAGAGCCCG - novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 CCTCAGAGCCCG CCTCAGAGCCCG . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . GP1BA NM_000173 exon2 c.1279_1290del p.427_430del . . 42.0 15.0 36.0 0.0 . 53 . . Atlas-INDEL PNN 5411 hgsc.bcm.edu hg19 14 39650465 39650470 + In_Frame_Del DEL CAGGAG CAGGAG - novel TCGA-DD-AADO-01A-11D-A40R-10 TCGA-DD-AADO-10A-01D-A40U-10 CAGGAG CAGGAG . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 0a3f5ccf-b8ce-4d56-af78-c4f04b7119f1 5ca67e3d-63d5-48e4-85b6-e7df2f4497ed . PNN NM_002687 exon9 c.1551_1556del p.517_519del . . 105.0 21.0 113.0 0.0 . 67 . . Atlas-INDEL