Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COSMIC_Codon COSMIC_Gene Transcript_Id Exon ChromChange AAChange Genome_Plus_Minus_10_Bp Drug_Target TTotCov TVarCov NTotCov NVarCov dbSNPPopFreq COSMIC_Gene_Freq COSMIC_Site_Freq dbSNP_AF Algorithm CHD5 26038 hgsc.bcm.edu hg19 1 6211179 6211179 + Missense_Mutation SNP T T A rs140594423 alternate_allele TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . CHD5 NM_015557 exon7 c.A907T p.S303C TGGCGCTGTCGAA . 26.0 8.0 44.0 0.0 . 267 . T|1.000;G|0.000 Atlas-SNP ZBTB48 3104 hgsc.bcm.edu hg19 1 6641168 6641168 + Nonsense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . ZBTB48 NM_005341 exon2 c.A499T p.R167X GAGCCCAGAGGCA . 77.0 33.0 95.0 0.0 . 33 . . Atlas-SNP MTOR 2475 hgsc.bcm.edu hg19 1 11301649 11301649 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . MTOR NM_004958 exon10 c.T1502A p.I501N TCCTTGATATCCT . 80.0 25.0 65.0 0.0 . 327 . . Atlas-SNP MST1L 11223 hgsc.bcm.edu hg19 1 17085815 17085815 + Missense_Mutation SNP C C T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . . NM_001271733 exon8 c.G1006A p.V336M AGCCCACGCGCGT . 98.0 22.0 143.0 0.0 . . . . Atlas-SNP CROCC 9696 hgsc.bcm.edu hg19 1 17280852 17280852 + Silent SNP G G T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . CROCC NM_014675 exon22 c.G3321T p.R1107R GGACCGGGTAGGG . 102.0 47.0 148.0 0.0 . 185 . . Atlas-SNP ARHGEF10L 55160 hgsc.bcm.edu hg19 1 17975106 17975106 + Missense_Mutation SNP C C G novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . ARHGEF10L NM_018125 exon22 c.C2330G p.P777R AAGCCCCATTCTG . 142.0 12.0 137.0 0.0 . 219 . . Atlas-SNP IFNLR1 163702 hgsc.bcm.edu hg19 1 24486039 24486039 + Nonsense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . . NM_170743 exon5 c.A595T p.R199X TGGTTCTGGCACT . 137.0 50.0 198.0 0.0 . . . . Atlas-SNP COL16A1 1307 hgsc.bcm.edu hg19 1 32149574 32149574 + Missense_Mutation SNP G G A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . COL16A1 NM_001856 exon33 c.C2314T p.P772S CTGGGGGCCCTTG . 285.0 106.0 357.0 0.0 . 137 . . Atlas-SNP ZMYM4 9202 hgsc.bcm.edu hg19 1 35884117 35884117 + Silent SNP T T C novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . ZMYM4 NM_005095 exon29 c.T4383C p.N1461N AGAGAATACTGAC . 120.0 62.0 134.0 0.0 . 143 . . Atlas-SNP RIMS3 9783 hgsc.bcm.edu hg19 1 41094561 41094561 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . RIMS3 NM_014747 exon7 c.A635T p.K212M GTCATCTTTGTCT . 62.0 26.0 77.0 0.0 . 44 . . Atlas-SNP EIF2B3 8891 hgsc.bcm.edu hg19 1 45340421 45340421 + Silent SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . EIF2B3 NM_020365 exon10 c.A1131T p.S377S ACAGGATGAGCCA . 89.0 45.0 111.0 0.0 . 43 . . Atlas-SNP KANK4 163782 hgsc.bcm.edu hg19 1 62740090 62740090 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . KANK4 NM_181712 exon3 c.A686T p.Q229L CCCTCCTGGACCA . 159.0 63.0 201.0 0.0 . 135 . . Atlas-SNP LRRC7 57554 hgsc.bcm.edu hg19 1 70503923 70503923 + Missense_Mutation SNP T T C novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . LRRC7 NM_020794 exon19 c.T2302C p.W768R GACAACTGGACTG . 144.0 55.0 160.0 0.0 . 400 . . Atlas-SNP RWDD3 25950 hgsc.bcm.edu hg19 1 95712212 95712212 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . RWDD3 NM_015485 exon3 c.A688T p.R230W CACAAAAGGTATA . 228.0 96.0 275.0 0.0 . 24 . . Atlas-SNP MYBPHL 343263 hgsc.bcm.edu hg19 1 109839480 109839480 + Missense_Mutation SNP C C T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . MYBPHL NM_001010985 exon5 c.G655A p.V219I CAAAGACACGGAA . 116.0 55.0 105.0 0.0 . 28 . . Atlas-SNP EPS8L3 79574 hgsc.bcm.edu hg19 1 110294361 110294361 + Missense_Mutation SNP G G T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 EPS8L3,colon,carcinoma,0,1 EPS8L3 NM_139053 exon16 c.C1481A p.A494E CGTCCCGCCTCAT . 52.0 18.0 61.0 0.0 . 73 . . Atlas-SNP SYT6 148281 hgsc.bcm.edu hg19 1 114646329 114646329 + Silent SNP C C T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . SYT6 NM_205848 exon4 c.G831A p.L277L CTCTCCCAAGTCC . 66.0 27.0 62.0 0.0 . 66 . . Atlas-SNP SPAG17 200162 hgsc.bcm.edu hg19 1 118558796 118558796 + Missense_Mutation SNP T T G novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . SPAG17 NM_206996 exon29 c.A4079C p.H1360P CTTTTGTGACTTT . 108.0 49.0 131.0 0.0 . 263 . . Atlas-SNP PDE4DIP 9659 hgsc.bcm.edu hg19 1 144930752 144930752 + Silent SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . PDE4DIP NM_001002811 exon1 c.A957T p.L319L TCCAGGTAGGCTG . 262.0 41.0 222.0 0.0 . 817 . . Atlas-SNP CTSS 1520 hgsc.bcm.edu hg19 1 150722488 150722488 + Nonsense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . CTSS NM_004079 exon6 c.A787T p.R263X CACTTCTGTAGAG . 84.0 34.0 81.0 0.0 . 31 . . Atlas-SNP PGLYRP3 114771 hgsc.bcm.edu hg19 1 153276487 153276487 + Splice_Site SNP T T G novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . PGLYRP3 NM_052891 exon5 c.377-2A>C . GCTGCCTTAAAGA . 92.0 35.0 45.0 0.0 . 55 . . Atlas-SNP IL6R 3570 hgsc.bcm.edu hg19 1 154407475 154407475 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . IL6R NM_000565 exon5 c.A650T p.D217V AGCCTGATCCGCC . 99.0 34.0 79.0 0.0 . 47 . . Atlas-SNP NES 10763 hgsc.bcm.edu hg19 1 156640210 156640210 + Missense_Mutation SNP C C A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . NES NM_006617 exon4 c.G3770T p.G1257V ACTTTCCCCAGGG . 56.0 21.0 44.0 0.0 . 196 . . Atlas-SNP NTRK1 4914 hgsc.bcm.edu hg19 1 156838010 156838010 + Silent SNP G G A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . NTRK1 NM_001012331 exon5 c.G543A p.G181G GCAAGGGCCCCTG . 60.0 11.0 40.0 0.0 . 287 . . Atlas-SNP PBX1 5087 hgsc.bcm.edu hg19 1 164768945 164768945 + Missense_Mutation SNP G G A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 PBX1_ENST00000420696,NS,carcinoma,0,1 PBX1 NM_001204963 exon4 c.G520A p.E174K TGCAACGAGTTCA . 174.0 44.0 169.0 0.0 . 60 . . Atlas-SNP PRRC2C 23215 hgsc.bcm.edu hg19 1 171556150 171556150 + Silent SNP A A G novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . . NM_015172 exon31 c.A7752G p.V2584V TACAGTACCTTTA . 98.0 4.0 92.0 0.0 . . . . Atlas-SNP METTL13 51603 hgsc.bcm.edu hg19 1 171761248 171761248 + Silent SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . METTL13 NM_015935 exon6 c.T1566A p.A522A TGATGCTGTGGAG . 118.0 24.0 102.0 0.0 . 67 . . Atlas-SNP KIAA1614 57710 hgsc.bcm.edu hg19 1 180885579 180885579 + Missense_Mutation SNP A A G novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . KIAA1614 NM_020950 exon2 c.A340G p.K114E TCCCCCAAGAAAC . 168.0 51.0 103.0 0.0 . 75 . . Atlas-SNP ZNF648 127665 hgsc.bcm.edu hg19 1 182025741 182025741 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . ZNF648 NM_001009992 exon2 c.A1405T p.I469F TGTGGATGCGCTG . 125.0 35.0 89.0 0.0 . 111 . . Atlas-SNP LAMC2 3918 hgsc.bcm.edu hg19 1 183209229 183209229 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . LAMC2 NM_005562 exon21 c.A3124T p.M1042L TTGGCCATGGAAA . 157.0 45.0 116.0 0.0 . 113 . . Atlas-SNP CFHR5 81494 hgsc.bcm.edu hg19 1 196965322 196965322 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . CFHR5 NM_030787 exon6 c.A961T p.M321L CTTCCTATGTGTG . 104.0 35.0 86.0 0.0 . 150 . . Atlas-SNP PLEKHA6 22874 hgsc.bcm.edu hg19 1 204226522 204226522 + Missense_Mutation SNP G G A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . PLEKHA6 NM_014935 exon9 c.C1483T p.P495S CAGCAGGGTCAGC . 118.0 42.0 141.0 0.0 . 115 . . Atlas-SNP AVPR1B 553 hgsc.bcm.edu hg19 1 206225342 206225342 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . AVPR1B NM_000707 exon1 c.A902T p.Q301L GTGTCCAGATGTG . 91.0 19.0 66.0 0.0 . 47 . . Atlas-SNP OBSCN 84033 hgsc.bcm.edu hg19 1 228482634 228482634 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . OBSCN NM_001271223 exon48 c.A12836T p.Q4279L TGAGGCAGGATGG . 304.0 93.0 262.0 0.0 . 2142 . . Atlas-SNP KIF26B 55083 hgsc.bcm.edu hg19 1 245851010 245851010 + Silent SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . KIF26B NM_018012 exon12 c.T4725A p.A1575A CAAGGCTACCCTG . 218.0 62.0 182.0 0.0 . 343 . . Atlas-SNP OR13G1 441933 hgsc.bcm.edu hg19 1 247835424 247835424 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . OR13G1 NM_001005487 exon1 c.A920T p.H307L TACTAGTGTTTCA . 110.0 24.0 65.0 0.0 . 78 . . Atlas-SNP OR2T11 127077 hgsc.bcm.edu hg19 1 248789949 248789949 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . OR2T11 NM_001001964 exon1 c.A481T p.M161L CATTCATGGTGAT . 150.0 59.0 63.0 0.0 . 64 . . Atlas-SNP ASAP2 8853 hgsc.bcm.edu hg19 2 9520899 9520899 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . ASAP2 NM_001135191 exon20 c.A1978T p.I660F CTGGACATTGCCA . 42.0 24.0 40.0 0.0 . 91 . . Atlas-SNP C2orf16 84226 hgsc.bcm.edu hg19 2 27804758 27804758 + Missense_Mutation SNP A A C rs200680705 TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 C2orf16_ENST00000408964,NS,carcinoma,0,2 C2orf16 NM_032266 exon1 c.A5319C p.R1773S GAGAAGACATCGC . 72.0 15.0 103.0 1.0 . 357 . . Atlas-SNP C2orf16 84226 hgsc.bcm.edu hg19 2 27804762 27804762 + Missense_Mutation SNP C C T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 C2orf16_ENST00000408964,NS,carcinoma,0,4 C2orf16 NM_032266 exon1 c.C5323T p.R1775C AGACATCGCAGTC . 77.0 19.0 102.0 0.0 . 357 . . Atlas-SNP TTC27 55622 hgsc.bcm.edu hg19 2 33007745 33007745 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . TTC27 NM_017735 exon15 c.A1832T p.K611I AACAAAAGTAAGT . 289.0 119.0 398.0 0.0 . 71 . . Atlas-SNP HEATR5B 54497 hgsc.bcm.edu hg19 2 37255261 37255261 + Missense_Mutation SNP C C G novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . HEATR5B NM_019024 exon24 c.G3658C p.D1220H TCTCATCTTTCTT . 245.0 94.0 291.0 0.0 . 185 . . Atlas-SNP SULT6B1 391365 hgsc.bcm.edu hg19 2 37415605 37415605 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . SULT6B1 NM_001032377 exon1 c.T65A p.L22Q GATGCTAGCACGA . 92.0 41.0 141.0 0.0 . 46 . . Atlas-SNP CD207 50489 hgsc.bcm.edu hg19 2 71058314 71058314 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . CD207 NM_015717 exon6 c.A854T p.E285V TTGGGCTCACCTG . 92.0 27.0 99.0 0.0 . 47 . . Atlas-SNP GGCX 2677 hgsc.bcm.edu hg19 2 85780558 85780558 + Nonsense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . GGCX NM_000821 exon8 c.A952T p.K318X CCAGCTTCCGAGG . 219.0 86.0 288.0 0.0 . 44 . . Atlas-SNP DPP10 57628 hgsc.bcm.edu hg19 2 116257157 116257157 + Silent SNP T T C rs139947044 TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . DPP10 NM_001178034 exon4 c.T355C p.L119L ACCACATTATTAT . 261.0 112.0 297.0 0.0 . 415 . T|1.000;C|0.000 Atlas-SNP KYNU 8942 hgsc.bcm.edu hg19 2 143718311 143718311 + Missense_Mutation SNP C C T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . KYNU NM_001199241 exon9 c.C701T p.P234L ATATTCCTGCCAT . 98.0 44.0 91.0 0.0 . 110 . . Atlas-SNP PLA2R1 22925 hgsc.bcm.edu hg19 2 160884730 160884730 + Silent SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . PLA2R1 NM_001195641 exon6 c.T1098A p.V366V CTTACCAACTATT . 303.0 135.0 377.0 0.0 . 153 . . Atlas-SNP SLC38A11 151258 hgsc.bcm.edu hg19 2 165793884 165793884 + Missense_Mutation SNP C C T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . SLC38A11 NM_001199148 exon6 c.G425A p.R142K ATTGCCCTTGCCA . 91.0 13.0 106.0 0.0 . 41 . . Atlas-SNP TTC21B 79809 hgsc.bcm.edu hg19 2 166781090 166781090 + Silent SNP G G C novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . TTC21B NM_024753 exon12 c.C1485G p.V495V TAGGAAGACTGTT . 321.0 14.0 447.0 0.0 . 130 . . Atlas-SNP LRP2 4036 hgsc.bcm.edu hg19 2 170062841 170062841 + Silent SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . LRP2 NM_004525 exon39 c.A7389T p.S2463S CTTACCTGAAGCA . 68.0 33.0 80.0 0.0 . 751 . . Atlas-SNP TTN 7273 hgsc.bcm.edu hg19 2 179428033 179428033 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . TTN NM_001267550 exon326 c.T82826A p.V27609D TCTTTGACCTCTA . 108.0 35.0 129.0 0.0 . 18412 . . Atlas-SNP TTN 7273 hgsc.bcm.edu hg19 2 179436145 179436145 + Missense_Mutation SNP G G A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . TTN NM_001267550 exon326 c.C74714T p.P24905L TTGAATGGATATT . 96.0 31.0 115.0 0.0 . 18412 . . Atlas-SNP TTN 7273 hgsc.bcm.edu hg19 2 179605680 179605680 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . TTN NM_001267550 exon48 c.T12280A p.Y4094N GCTCATAAGATAG . 76.0 28.0 90.0 0.0 . 18412 . . Atlas-SNP PARD3B 117583 hgsc.bcm.edu hg19 2 205912302 205912302 + Splice_Site SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . PARD3B NM_057177 exon4 c.395-2A>T . TCTTCCAGGCACT . 48.0 24.0 72.0 0.0 . 314 . . Atlas-SNP GLB1L 79411 hgsc.bcm.edu hg19 2 220104515 220104515 + Nonsense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . GLB1L NM_024506 exon8 c.T762A p.Y254X GGGTTCATACTTC . 186.0 87.0 214.0 0.0 . 52 . . Atlas-SNP SPEG 10290 hgsc.bcm.edu hg19 2 220344852 220344852 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . SPEG NM_005876 exon25 c.A5332T p.T1778S GGAGTCACTGACA . 37.0 16.0 60.0 0.0 . 272 . . Atlas-SNP SLC4A3 6508 hgsc.bcm.edu hg19 2 220501121 220501121 + Silent SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . SLC4A3 NM_201574 exon15 c.T2370A p.L790L GCTGCTTGTGGTT . 36.0 14.0 47.0 0.0 . 144 . . Atlas-SNP DGKD 8527 hgsc.bcm.edu hg19 2 234296973 234296973 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . DGKD NM_152879 exon2 c.A227T p.K76M ACTTTAAGCTTCG . 212.0 91.0 333.0 0.0 . 106 . . Atlas-SNP ITPR1 3708 hgsc.bcm.edu hg19 3 4558209 4558209 + Nonsense_Mutation SNP G G T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . ITPR1 NM_001099952 exon3 c.G34T p.G12X CATATTGGAGACA . 109.0 5.0 127.0 0.0 . 659 . . Atlas-SNP LHFPL4 375323 hgsc.bcm.edu hg19 3 9547751 9547751 + Missense_Mutation SNP G G C novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . LHFPL4 NM_198560 exon3 c.C543G p.I181M GCCGATGATGGCC . 129.0 10.0 174.0 0.0 . 34 . . Atlas-SNP HRH1 3269 hgsc.bcm.edu hg19 3 11300933 11300933 + Silent SNP G G A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . HRH1 NM_000861 exon3 c.G210A p.S70S CCTCTCGGTGGCG . 97.0 37.0 110.0 0.0 . 58 . . Atlas-SNP RFTN1 23180 hgsc.bcm.edu hg19 3 16450985 16450985 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . RFTN1 NM_015150 exon4 c.A338T p.Q113L GTTTTCTGAGATC . 73.0 34.0 81.0 0.0 . 79 . . Atlas-SNP MYD88 4615 hgsc.bcm.edu hg19 3 38180513 38180513 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . MYD88 NM_002468 exon1 c.A361T p.S121C GGACCCAGCATTG . 41.0 16.0 49.0 0.0 . 900 . . Atlas-SNP CSPG5 10675 hgsc.bcm.edu hg19 3 47614356 47614356 + Missense_Mutation SNP G G A rs371926119 TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . CSPG5 NM_006574 exon3 c.C1202T p.T401M TCCTGCGTGTTGC . 113.0 48.0 180.0 0.0 . 46 . . Atlas-SNP DHX30 22907 hgsc.bcm.edu hg19 3 47889323 47889323 + Silent SNP A A G novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . DHX30 NM_138615 exon14 c.A2163G p.P721P GCCTCCAGTTGGG . 110.0 43.0 184.0 0.0 . 101 . . Atlas-SNP IL17RD 54756 hgsc.bcm.edu hg19 3 57135384 57135384 + Silent SNP T T A rs143634778 by1000genomes;alternate_allele TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . IL17RD NM_017563 exon11 c.A987T p.I329I TGAATATATATTT . 57.0 21.0 62.0 0.0 . 93 . T|1.000;C|0.000 Atlas-SNP DZIP3 9666 hgsc.bcm.edu hg19 3 108407715 108407715 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . DZIP3 NM_014648 exon31 c.A3460T p.N1154Y CATGAGAATCTGT . 272.0 126.0 347.0 0.0 . 111 . . Atlas-SNP MYLK 4638 hgsc.bcm.edu hg19 3 123419013 123419013 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . MYLK NM_053025 exon18 c.A3302T p.K1101M TTCTGCTTGAAGG . 38.0 20.0 71.0 0.0 . 224 . . Atlas-SNP RPN1 6184 hgsc.bcm.edu hg19 3 128356921 128356921 + Silent SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . RPN1 NM_002950 exon3 c.A354T p.P118P AGCAACTGGGAGC . 84.0 43.0 112.0 0.0 . 39 . . Atlas-SNP ATR 545 hgsc.bcm.edu hg19 3 142268433 142268433 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . ATR NM_001184 exon15 c.A3059T p.Q1020L TTTAATTGTTTTC . 389.0 176.0 478.0 0.0 . 285 . . Atlas-SNP CPB1 1360 hgsc.bcm.edu hg19 3 148558490 148558490 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . CPB1 NM_001871 exon4 c.T290A p.L97Q GCAACCTGAGAAA . 153.0 65.0 168.0 0.0 . 74 . . Atlas-SNP LAMP3 27074 hgsc.bcm.edu hg19 3 182871558 182871558 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . LAMP3 NM_014398 exon2 c.A671T p.K224M CCAGTCTTGACTG . 125.0 52.0 122.0 0.0 . 48 . . Atlas-SNP EVC2 132884 hgsc.bcm.edu hg19 4 5570231 5570231 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . EVC2 NM_147127 exon20 c.A3497T p.H1166L TCCACATGTCTCT . 81.0 40.0 81.0 0.0 . 202 . . Atlas-SNP CRMP1 1400 hgsc.bcm.edu hg19 4 5868428 5868428 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . CRMP1 NM_001014809 exon2 c.A437T p.Y146F TCAGCATAAAGGG . 115.0 48.0 118.0 0.0 . 118 . . Atlas-SNP CHRNA9 55584 hgsc.bcm.edu hg19 4 40351387 40351387 + Missense_Mutation SNP T T C novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . CHRNA9 NM_017581 exon4 c.T854C p.M285T AGCTAATGGTGGC . 157.0 54.0 202.0 0.0 . 53 . . Atlas-SNP PDGFRA 5156 hgsc.bcm.edu hg19 4 55127497 55127497 + Silent SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . PDGFRA NM_006206 exon3 c.A285T p.T95T CCACACAGGGTTG . 116.0 51.0 114.0 0.0 . 1583 . . Atlas-SNP WDFY3 23001 hgsc.bcm.edu hg19 4 85678264 85678264 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . WDFY3 NM_014991 exon33 c.A5239T p.N1747Y CTCGGTTAATCTC . 165.0 76.0 218.0 0.0 . 314 . . Atlas-SNP PRSS12 8492 hgsc.bcm.edu hg19 4 119256640 119256640 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . PRSS12 NM_003619 exon3 c.A808T p.S270C AAAAGCTACACGT . 93.0 44.0 107.0 0.0 . 71 . . Atlas-SNP GUCY1A3 2982 hgsc.bcm.edu hg19 4 156634263 156634263 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . GUCY1A3 NM_001130687 exon7 c.A1100T p.K367I ACCTCAAAGGCCA . 57.0 47.0 84.0 0.0 . 133 . . Atlas-SNP DNAH5 1767 hgsc.bcm.edu hg19 5 13737537 13737537 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . DNAH5 NM_001369 exon66 c.T11279A p.L3760Q TCTTCTAGTTCCT . 79.0 31.0 89.0 0.0 . 868 . . Atlas-SNP MYO10 4651 hgsc.bcm.edu hg19 5 16779678 16779678 + Missense_Mutation SNP G G C novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . MYO10 NM_012334 exon9 c.C906G p.D302E TTCCTGGTCACTG . 197.0 84.0 302.0 1.0 . 198 . . Atlas-SNP MYO10 4651 hgsc.bcm.edu hg19 5 16779718 16779718 + Nonsense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . MYO10 NM_012334 exon9 c.T866A p.L289X TGATTCAAGTAGT . 216.0 100.0 292.0 0.0 . 198 . . Atlas-SNP RAB3C 115827 hgsc.bcm.edu hg19 5 58120945 58120945 + Missense_Mutation SNP G G T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . RAB3C NM_138453 exon4 c.G452T p.R151L ACGAGCGGGTCAT . 349.0 142.0 455.0 0.0 . 47 . . Atlas-SNP SLC25A48 153328 hgsc.bcm.edu hg19 5 135188296 135188296 + Silent SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . SLC25A48 NM_145282 exon4 c.T207A p.I69I CAGCATTGCCGTC . 81.0 30.0 72.0 0.0 . 37 . . Atlas-SNP PCDHGB1 56104 hgsc.bcm.edu hg19 5 140730033 140730033 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . PCDHGB1 NM_018922 exon1 c.A206T p.E69V GTGCAGAGGATTA . 125.0 58.0 156.0 0.0 . 198 . . Atlas-SNP ARAP3 64411 hgsc.bcm.edu hg19 5 141038013 141038013 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . ARAP3 NM_022481 exon25 c.A3445T p.N1149Y CCTGGTTAGTCAG . 104.0 44.0 124.0 0.0 . 139 . . Atlas-SNP HMMR 3161 hgsc.bcm.edu hg19 5 162917465 162917465 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . HMMR NM_001142556 exon17 c.A2032T p.N678Y GAATTGAATAAAG . 379.0 155.0 446.0 0.0 . 64 . . Atlas-SNP ADAMTS2 9509 hgsc.bcm.edu hg19 5 178553054 178553054 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . ADAMTS2 NM_014244 exon18 c.T2695A p.S899T GCTTCGAGAGGGC . 32.0 11.0 60.0 0.0 . 190 . . Atlas-SNP CDYL 9425 hgsc.bcm.edu hg19 6 4937882 4937882 + Silent SNP C C G novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . CDYL NM_004824 exon4 c.C1032G p.V344V CAGCGTCTTCTGT . 214.0 128.0 153.0 0.0 . 74 . . Atlas-SNP RPP40 10799 hgsc.bcm.edu hg19 6 4996253 4996253 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . RPP40 NM_006638 exon7 c.A825T p.K275N ATAAGCTTTTGCC . 214.0 52.0 154.0 0.0 . 36 . . Atlas-SNP PHACTR1 221692 hgsc.bcm.edu hg19 6 13053698 13053698 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . PHACTR1 NM_030948 exon5 c.A352T p.R118W CTGGGAAGGATTT . 236.0 67.0 180.0 0.0 . 94 . . Atlas-SNP NUP153 9972 hgsc.bcm.edu hg19 6 17616802 17616802 + Silent SNP C C A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . NUP153 NM_005124 exon21 c.G4299T p.S1433S GCCCCCCGAGCCT . 94.0 34.0 111.0 0.0 . 116 . . Atlas-SNP PPP1R11 6992 hgsc.bcm.edu hg19 6 30035217 30035217 + Missense_Mutation SNP G G T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . PPP1R11 NM_021959 exon1 c.G30T p.E10D GAGCGAGACCGTC . 182.0 85.0 235.0 0.0 . 10 . . Atlas-SNP SFTA2 389376 hgsc.bcm.edu hg19 6 30899302 30899302 + Missense_Mutation SNP T T C novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . SFTA2 NM_205854 exon3 c.A200G p.H67R CTTGCATGGTGGA . 92.0 31.0 119.0 0.0 . 6 . . Atlas-SNP DNAH8 1769 hgsc.bcm.edu hg19 6 38697676 38697676 + Splice_Site SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . DNAH8 NM_001206927 exon4 c.526-2A>T . TTTAACAGCTGGA . 93.0 43.0 130.0 0.0 . 1239 . . Atlas-SNP LCA5 167691 hgsc.bcm.edu hg19 6 80196733 80196733 + Silent SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . LCA5 NM_001122769 exon8 c.A2082T p.V694V CAGTGCTACTTCT . 68.0 28.0 52.0 0.0 . 71 . . Atlas-SNP BEND3 57673 hgsc.bcm.edu hg19 6 107390113 107390113 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . BEND3 NM_001080450 exon5 c.A2282T p.Y761F TGGTTGTACTGCA . 103.0 43.0 168.0 0.0 . 70 . . Atlas-SNP TAAR1 134864 hgsc.bcm.edu hg19 6 132966654 132966654 + Silent SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . TAAR1 NM_138327 exon1 c.A489T p.L163L GAAGTTTAGCTCC . 110.0 49.0 111.0 0.0 . 41 . . Atlas-SNP MAD1L1 8379 hgsc.bcm.edu hg19 7 2020106 2020106 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . MAD1L1 NM_003550 exon15 c.A1487T p.E496V GCCTCCTCCCTGG . 66.0 25.0 62.0 0.0 . 81 . . Atlas-SNP AQP1 358 hgsc.bcm.edu hg19 7 30961780 30961780 + Missense_Mutation SNP C C T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . AQP1 NM_198098 exon2 c.C484T p.R162C AGGCGCCGTGACC . 59.0 30.0 41.0 0.0 . 38 . . Atlas-SNP CACNA2D1 781 hgsc.bcm.edu hg19 7 81589122 81589122 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . CACNA2D1 NM_000722 exon37 c.T2990A p.M997K GTGTTCATAAGCT . 54.0 22.0 59.0 0.0 . 191 . . Atlas-SNP SAMD9 54809 hgsc.bcm.edu hg19 7 92734072 92734072 + Missense_Mutation SNP T T C novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . SAMD9 NM_001193307 exon2 c.A1339G p.N447D TGATGTTAGACTC . 72.0 31.0 87.0 0.0 . 239 . . Atlas-SNP STAG3 10734 hgsc.bcm.edu hg19 7 99798553 99798553 + Silent SNP G G C novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . STAG3 NM_012447 exon19 c.G2022C p.L674L TTTGCTGACTGAC . 138.0 24.0 146.0 0.0 . 121 . . Atlas-SNP MET 4233 hgsc.bcm.edu hg19 7 116423438 116423438 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . MET NM_001127500 exon19 c.A3767T p.H1256L GTGTACACAACAA . 139.0 58.0 128.0 0.0 . 412 . . Atlas-SNP LEP 3952 hgsc.bcm.edu hg19 7 127894673 127894673 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . LEP NM_000230 exon3 c.T361A p.W121R TTGCCCTGGGCCA . 50.0 27.0 77.0 0.0 . 17 . . Atlas-SNP SSPO 23145 hgsc.bcm.edu hg19 7 149488699 149488699 + Missense_Mutation SNP G G T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . . NM_198455 exon34 c.G5150T p.R1717L AGGGCCGGAGCCG . 52.0 27.0 64.0 0.0 . . . . Atlas-SNP ADRB3 155 hgsc.bcm.edu hg19 8 37821737 37821737 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . ADRB3 NM_000025 exon2 c.A1226T p.X409L CAGGCCTAAGAAA . 58.0 45.0 128.0 0.0 . 27 . . Atlas-SNP CHRNB3 1142 hgsc.bcm.edu hg19 8 42587110 42587110 + Silent SNP T T C novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . CHRNB3 NM_000749 exon5 c.T660C p.Y220Y CTCCTATCCCTTT . 84.0 38.0 102.0 0.0 . 74 . . Atlas-SNP XKR4 114786 hgsc.bcm.edu hg19 8 56436483 56436483 + Silent SNP C C A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . XKR4 NM_052898 exon3 c.C1650A p.S550S CATCTCCAACAAC . 77.0 35.0 99.0 0.0 . 104 . . Atlas-SNP ADHFE1 137872 hgsc.bcm.edu hg19 8 67356642 67356642 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . ADHFE1 NM_144650 exon4 c.A185T p.K62M TTACAAAGGAAGT . 213.0 50.0 175.0 0.0 . 83 . . Atlas-SNP EYA1 2138 hgsc.bcm.edu hg19 8 72129021 72129021 + Silent SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . EYA1 NM_000503 exon14 c.T1266A p.T422T TACACCAGTTGCC . 210.0 62.0 164.0 0.0 . 108 . . Atlas-SNP FER1L6 654463 hgsc.bcm.edu hg19 8 125107154 125107154 + Missense_Mutation SNP T T C novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . FER1L6 NM_001039112 exon35 c.T4570C p.Y1524H GAGTCTTATGAAC . 101.0 39.0 147.0 0.0 . 268 . . Atlas-SNP FAM135B 51059 hgsc.bcm.edu hg19 8 139323154 139323154 + Missense_Mutation SNP C C G novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . FAM135B NM_015912 exon3 c.G87C p.Q29H TCGGATCTGGTAA . 58.0 21.0 56.0 0.0 . 423 . . Atlas-SNP C8orf31 286122 hgsc.bcm.edu hg19 8 144126142 144126142 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . C8orf31 NM_173687 exon4 c.A263T p.Q88L CCATCCAGGAAGG . 55.0 22.0 76.0 0.0 . 18 . . Atlas-SNP TSTA3 7264 hgsc.bcm.edu hg19 8 144696547 144696547 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . TSTA3 NM_003313 exon6 c.A541T p.N181Y CGATGTTGAAGTT . 65.0 25.0 97.0 0.0 . 23 . . Atlas-SNP DOCK8 81704 hgsc.bcm.edu hg19 9 439312 439312 + Missense_Mutation SNP G G T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . DOCK8 NM_203447 exon40 c.G5147T p.G1716V AGGATGGGGTGTG . 90.0 40.0 115.0 0.0 . 401 . . Atlas-SNP CEP78 84131 hgsc.bcm.edu hg19 9 80851282 80851282 + Nonsense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . CEP78 NM_001098802 exon1 c.A16T p.K6X TCCGTGAAGCTGC . 33.0 17.0 55.0 0.0 . 79 . . Atlas-SNP CCDC180 0 hgsc.bcm.edu hg19 9 100124601 100124601 + Silent SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . . NM_020893 exon28 c.A3912T p.S1304S GTGCTCACCTCCT . 95.0 57.0 101.0 0.0 . . . . Atlas-SNP NDUFA8 4702 hgsc.bcm.edu hg19 9 124906563 124906563 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . NDUFA8 NM_014222 exon4 c.A476T p.Q159L GCAGGCTGCAGAT . 105.0 48.0 129.0 0.0 . 20 . . Atlas-SNP OR1J1 347168 hgsc.bcm.edu hg19 9 125240003 125240003 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . OR1J1 NM_001004451 exon1 c.T203A p.L68H TCAGTGAGGGCCA . 120.0 42.0 147.0 0.0 . 46 . . Atlas-SNP EGFL7 51162 hgsc.bcm.edu hg19 9 139566450 139566450 + Missense_Mutation SNP G G C rs370929489 alternate_allele TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . EGFL7 NM_016215 exon10 c.G709C p.G237R GACCCCGGCAGCC . 60.0 29.0 74.0 0.0 . 11 . . Atlas-SNP AKR1C1 1645 hgsc.bcm.edu hg19 10 5005646 5005646 + Missense_Mutation SNP A A G novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . AKR1C1 NM_001353 exon1 c.A10G p.K4E GATTCGAAATATC . 89.0 42.0 138.0 0.0 . 39 . . Atlas-SNP RASSF4 83937 hgsc.bcm.edu hg19 10 45480272 45480272 + Missense_Mutation SNP G G A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . RASSF4 NM_032023 exon6 c.G385A p.E129K CTGGAGGAGGCAG . 65.0 15.0 137.0 0.0 . 33 . . Atlas-SNP SLK 9748 hgsc.bcm.edu hg19 10 105762701 105762701 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . SLK NM_014720 exon9 c.A1765T p.M589L AAGCCCATGGTGG . 49.0 34.0 110.0 0.0 . 107 . . Atlas-SNP MUC6 4588 hgsc.bcm.edu hg19 11 1013919 1013919 + Silent SNP G G T rs372205312 alternate_allele TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . MUC6 NM_005961 exon32 c.C7122A p.G2374G GCAGGCGCCCTCA . 45.0 16.0 37.0 0.0 . 408 . . Atlas-SNP DCHS1 8642 hgsc.bcm.edu hg19 11 6651648 6651648 + Silent SNP G G A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . DCHS1 NM_003737 exon10 c.C4377T p.R1459R CGACGCGCGGAAA . 9.0 7.0 1.0 0.0 . 277 . . Atlas-SNP CSNK2A3 283106 hgsc.bcm.edu hg19 11 11374171 11374171 + Missense_Mutation SNP G G A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . . NM_001256686 exon1 c.C496T p.H166Y GCTCATGATCAAT . 110.0 33.0 84.0 0.0 . . . . Atlas-SNP DGKZ 8525 hgsc.bcm.edu hg19 11 46394022 46394022 + Silent SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . DGKZ NM_001105540 exon12 c.A1536T p.R512R TCCCCGACAAGTC . 93.0 26.0 115.0 0.0 . 199 . . Atlas-SNP SLC22A10 387775 hgsc.bcm.edu hg19 11 63057748 63057748 + Silent SNP A A G novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . SLC22A10 NM_001039752 exon1 c.A111G p.L37L ACTGCTAGAGAAC . 121.0 63.0 139.0 0.0 . 79 . . Atlas-SNP NARS2 79731 hgsc.bcm.edu hg19 11 78147774 78147774 + Missense_Mutation SNP A A G novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . NARS2 NM_024678 exon14 c.T1376C p.V459A TTGTCAACACCCA . 316.0 129.0 388.0 1.0 . 62 . . Atlas-SNP KIAA1731 85459 hgsc.bcm.edu hg19 11 93461977 93461977 + Missense_Mutation SNP G G A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . KIAA1731 NM_033395 exon25 c.G7292A p.C2431Y CAAAATGCTTCTT . 45.0 20.0 49.0 0.0 . 173 . . Atlas-SNP ARHGAP42 143872 hgsc.bcm.edu hg19 11 100849716 100849716 + Splice_Site SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . ARHGAP42 NM_152432 exon22 c.2394-2A>T . TTTTTCAGAGTGG . 72.0 26.0 66.0 0.0 . 32 . . Atlas-SNP SLC35F2 54733 hgsc.bcm.edu hg19 11 107682490 107682490 + Missense_Mutation SNP C C G novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . SLC35F2 NM_017515 exon3 c.G317C p.R106T CATTTTCTTTTCA . 64.0 18.0 116.0 0.0 . 29 . . Atlas-SNP UBE4A 9354 hgsc.bcm.edu hg19 11 118245934 118245934 + Silent SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . UBE4A NM_004788 exon9 c.A1461T p.V487V AAATGTACACATG . 64.0 31.0 70.0 0.0 . 97 . . Atlas-SNP KIRREL3 84623 hgsc.bcm.edu hg19 11 126326329 126326329 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . KIRREL3 NM_032531 exon7 c.T763A p.S255T CCACCGAGAGGTT . 70.0 25.0 72.0 0.0 . 183 . . Atlas-SNP ACAD8 27034 hgsc.bcm.edu hg19 11 134127071 134127071 + Silent SNP G G T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . ACAD8 NM_014384 exon3 c.G300T p.L100L TGGGCTGTCACGT . 73.0 33.0 100.0 0.0 . 33 . . Atlas-SNP B3GAT1 27087 hgsc.bcm.edu hg19 11 134253922 134253922 + Silent SNP G G T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . B3GAT1 NM_054025 exon3 c.C273A p.P91P GTAGGTGGGCGTC . 119.0 56.0 123.0 0.0 . 49 . . Atlas-SNP VWF 7450 hgsc.bcm.edu hg19 12 6091140 6091140 + Missense_Mutation SNP A A C novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . VWF NM_000552 exon42 c.T7099G p.C2367G TTTTGCACTCCTC . 66.0 25.0 68.0 0.0 . 338 . . Atlas-SNP NCAPD2 9918 hgsc.bcm.edu hg19 12 6618958 6618958 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . NCAPD2 NM_014865 exon3 c.A203T p.H68L TTTTGCAGTAAGT . 58.0 16.0 84.0 0.0 . 99 . . Atlas-SNP CLEC12B 387837 hgsc.bcm.edu hg19 12 10167985 10167985 + Missense_Mutation SNP A A G novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . CLEC12B NM_001129998 exon4 c.A544G p.I182V GTGAAGATAGACA . 111.0 48.0 120.0 0.0 . 25 . . Atlas-SNP RAPGEF3 10411 hgsc.bcm.edu hg19 12 48143536 48143536 + Silent SNP C C G novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . RAPGEF3 NM_001098531 exon9 c.G882C p.V294V ATGGGTCACCACG . 55.0 6.0 91.0 0.0 . 98 . . Atlas-SNP MLL2 8085 hgsc.bcm.edu hg19 12 49440559 49440559 + Missense_Mutation SNP C C A rs200353763 by1000genomes;alternate_allele TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . MLL2 NM_003482 exon15 c.G4251T p.M1417I GAGCAGCATCACC . 74.0 28.0 117.0 0.0 . 1173 . C|1.000;T|0.000 Atlas-SNP KRT71 112802 hgsc.bcm.edu hg19 12 52946681 52946681 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . KRT71 NM_033448 exon1 c.A181T p.S61C TGCCACTGGCCAC . 67.0 34.0 89.0 0.0 . 70 . . Atlas-SNP PPM1H 57460 hgsc.bcm.edu hg19 12 63328291 63328291 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . PPM1H NM_020700 exon1 c.T226A p.W76R TGGCCCAGGGCAG . 90.0 40.0 119.0 0.0 . 42 . . Atlas-SNP EEA1 8411 hgsc.bcm.edu hg19 12 93170694 93170694 + Nonsense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . EEA1 NM_003566 exon28 c.A4039T p.R1347X ACTTTCTATTCAA . 85.0 42.0 84.0 0.0 . 104 . . Atlas-SNP UTP20 27340 hgsc.bcm.edu hg19 12 101745844 101745844 + Silent SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . UTP20 NM_014503 exon39 c.A4896T p.I1632I AAATATAACCACT . 101.0 35.0 116.0 0.0 . 222 . . Atlas-SNP CAMKK2 10645 hgsc.bcm.edu hg19 12 121691155 121691155 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . CAMKK2 NM_153500 exon10 c.T1028A p.L343H GAGAGGAGCGCGT . 93.0 40.0 130.0 0.0 . 87 . . Atlas-SNP PUS1 80324 hgsc.bcm.edu hg19 12 132428101 132428101 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . PUS1 NM_025215 exon6 c.A1254T p.E418D CCTGGAAGGCAGT . 47.0 23.0 60.0 0.0 . 47 . . Atlas-SNP NUDT15 55270 hgsc.bcm.edu hg19 13 48611949 48611949 + Missense_Mutation SNP T T G novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . NUDT15 NM_018283 exon1 c.T67G p.C23G ACCAGCTGCAAGC . 103.0 91.0 217.0 0.0 . 12 . . Atlas-SNP CHAMP1 283489 hgsc.bcm.edu hg19 13 115090611 115090611 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . . NM_001164144 exon3 c.A1294T p.S432C ATCCGTAGTCCAG . 110.0 32.0 119.0 0.0 . . . . Atlas-SNP IRF9 10379 hgsc.bcm.edu hg19 14 24634149 24634149 + Missense_Mutation SNP G G T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . IRF9 NM_006084 exon7 c.G976T p.A326S AGAACCGCCTACT . 39.0 16.0 44.0 0.0 . 33 . . Atlas-SNP IRF9 10379 hgsc.bcm.edu hg19 14 24634150 24634150 + Missense_Mutation SNP C C T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . IRF9 NM_006084 exon7 c.C977T p.A326V GAACCGCCTACTT . 38.0 16.0 42.0 0.0 . 33 . . Atlas-SNP ITPK1 3705 hgsc.bcm.edu hg19 14 93424588 93424588 + Missense_Mutation SNP C C A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . ITPK1 NM_001142593 exon8 c.G628T p.V210F TCTGGACCACGGT . 101.0 58.0 110.0 0.0 . 53 . . Atlas-SNP HHIPL1 84439 hgsc.bcm.edu hg19 14 100138668 100138668 + Missense_Mutation SNP G G C novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . HHIPL1 NM_001127258 exon8 c.G1745C p.G582A CACCTGGCAAATG . 117.0 8.0 123.0 0.0 . 86 . . Atlas-SNP JAG2 3714 hgsc.bcm.edu hg19 14 105609964 105609964 + Silent SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . JAG2 NM_002226 exon25 c.T3096A p.P1032P CCTGGCAGGGCTG . 51.0 22.0 53.0 0.0 . 69 . . Atlas-SNP PACS2 23241 hgsc.bcm.edu hg19 14 105849223 105849223 + Missense_Mutation SNP G G T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . PACS2 NM_001100913 exon15 c.G1598T p.S533I CCTTCAGCACCAT . 29.0 13.0 35.0 0.0 . 75 . . Atlas-SNP MTA1 9112 hgsc.bcm.edu hg19 14 105931455 105931455 + Missense_Mutation SNP C C T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . MTA1 NM_004689 exon16 c.C1559T p.S520F AAGCCTCCCAGAG . 100.0 37.0 119.0 0.0 . 61 . . Atlas-SNP HERC2 8924 hgsc.bcm.edu hg19 15 28474355 28474355 + Missense_Mutation SNP T T C novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . HERC2 NM_004667 exon34 c.A5258G p.K1753R TTAAATTTGGCAC . 245.0 100.0 339.0 0.0 . 501 . . Atlas-SNP GREM1 26585 hgsc.bcm.edu hg19 15 33022899 33022899 + Missense_Mutation SNP G G A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . GREM1 NM_001191322 exon2 c.G8A p.R3H TGAGCCGCACAGC . 133.0 49.0 170.0 0.0 . 18 . . Atlas-SNP PLA2G4E 123745 hgsc.bcm.edu hg19 15 42342841 42342841 + Missense_Mutation SNP T T C novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . PLA2G4E NM_001206670 exon1 c.A61G p.S21G GTGGGCTCTGTGG . 62.0 25.0 87.0 0.0 . 60 . . Atlas-SNP TP53BP1 7158 hgsc.bcm.edu hg19 15 43724680 43724680 + Silent SNP C C G novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . TP53BP1 NM_001141980 exon17 c.G3387C p.V1129V TTCTAGCACATCT . 76.0 27.0 108.0 0.0 . 157 . . Atlas-SNP ANXA2 302 hgsc.bcm.edu hg19 15 60678246 60678246 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . ANXA2 NM_001002858 exon2 c.A83T p.K28M CTGAGCTTGCACA . 403.0 187.0 525.0 0.0 . 28 . . Atlas-SNP VPS13C 54832 hgsc.bcm.edu hg19 15 62212341 62212341 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . VPS13C NM_020821 exon57 c.A7402T p.S2468C CCATGCTGGCATA . 126.0 45.0 128.0 0.0 . 506 . . Atlas-SNP LACTB 114294 hgsc.bcm.edu hg19 15 63419550 63419550 + Splice_Site SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . LACTB NM_171846 exon4 c.616-2A>T . ACAATTAGGTTTC . 198.0 81.0 214.0 0.0 . 29 . . Atlas-SNP KIAA1024 23251 hgsc.bcm.edu hg19 15 79749293 79749293 + Missense_Mutation SNP G G A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . KIAA1024 NM_015206 exon2 c.G804A p.M268I TTTGATGGCAGTG . 132.0 54.0 141.0 0.0 . 146 . . Atlas-SNP FLYWCH1 84256 hgsc.bcm.edu hg19 16 2983205 2983205 + Missense_Mutation SNP A A C novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . FLYWCH1 NM_020912 exon5 c.A868C p.K290Q CTCTACAAGCGGG . 42.0 10.0 46.0 0.0 . 27 . . Atlas-SNP SLX4 84464 hgsc.bcm.edu hg19 16 3634809 3634809 + Missense_Mutation SNP G G C novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . SLX4 NM_032444 exon13 c.C4700G p.S1567C ATAATGGAATACT . 95.0 47.0 125.0 0.0 . 173 . . Atlas-SNP CREBBP 1387 hgsc.bcm.edu hg19 16 3807812 3807812 + Nonsense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . CREBBP NM_004380 exon18 c.A3607T p.K1203X GTACCTTGCGTCC . 48.0 19.0 33.0 0.0 . 546 . . Atlas-SNP ADCY9 115 hgsc.bcm.edu hg19 16 4057436 4057436 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . ADCY9 NM_001116 exon3 c.A1817T p.Q606L GTCCCCTGTCCCC . 29.0 12.0 44.0 0.0 . 151 . . Atlas-SNP DNAH3 55567 hgsc.bcm.edu hg19 16 21086768 21086768 + Silent SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . DNAH3 NM_017539 exon21 c.T3084A p.T1028T ACTCACAGTGTCC . 220.0 105.0 260.0 0.0 . 1142 . . Atlas-SNP TAOK2 9344 hgsc.bcm.edu hg19 16 29990374 29990374 + Silent SNP C C T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . TAOK2 NM_004783 exon6 c.C432T p.S144S GCACTCCCACAAC . 81.0 38.0 101.0 0.0 . 142 . . Atlas-SNP LONP2 83752 hgsc.bcm.edu hg19 16 48368263 48368263 + Missense_Mutation SNP A A C novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . LONP2 NM_031490 exon12 c.A1932C p.E644D GTATGAAATGGAG . 62.0 46.0 130.0 0.0 . 63 . . Atlas-SNP CDH8 1006 hgsc.bcm.edu hg19 16 61689606 61689606 + Silent SNP C C T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . CDH8 NM_001796 exon11 c.G1674A p.L558L CTTTGCCAAAATA . 78.0 57.0 177.0 0.0 . 273 . . Atlas-SNP AGRP 181 hgsc.bcm.edu hg19 16 67517219 67517219 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . AGRP NM_001138 exon2 c.T83A p.M28K CCCTCCATGGGGG . 51.0 39.0 137.0 0.0 . 8 . . Atlas-SNP IL34 146433 hgsc.bcm.edu hg19 16 70690996 70690996 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . IL34 NM_152456 exon5 c.T374A p.L125Q AGACGCTGCTGCT . 22.0 18.0 43.0 0.0 . 26 . . Atlas-SNP DNAAF1 123872 hgsc.bcm.edu hg19 16 84203529 84203529 + Silent SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . DNAAF1 NM_178452 exon8 c.T1095A p.P365P GGAGCCTCCCGGG . 58.0 44.0 130.0 0.0 . 81 . . Atlas-SNP NXN 64359 hgsc.bcm.edu hg19 17 722716 722716 + Silent SNP G G C novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . NXN NM_022463 exon5 c.C783G p.A261A CCGCCGGGCCTCA . 52.0 42.0 106.0 0.0 . 32 . . Atlas-SNP SDF2 6388 hgsc.bcm.edu hg19 17 26982447 26982447 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . SDF2 NM_006923 exon2 c.A206T p.Y69F CTCCAGTAACTGT . 123.0 58.0 132.0 0.0 . 17 . . Atlas-SNP NSRP1 84081 hgsc.bcm.edu hg19 17 28507943 28507943 + Nonsense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . NSRP1 NM_032141 exon6 c.A526T p.K176X GTAACCAAGCAGA . 81.0 32.0 100.0 0.0 . 49 . . Atlas-SNP COPRS 55352 hgsc.bcm.edu hg19 17 30179202 30179202 + Nonsense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . . NM_018405 exon4 c.A511T p.K171X CCATCTTGGAATA . 140.0 54.0 157.0 0.0 . . . . Atlas-SNP FNDC8 54752 hgsc.bcm.edu hg19 17 33456507 33456507 + Missense_Mutation SNP G G A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . FNDC8 NM_017559 exon3 c.G652A p.A218T GAGGTGGCCAAGA . 99.0 4.0 101.0 0.0 . 28 . . Atlas-SNP GAST 2520 hgsc.bcm.edu hg19 17 39871711 39871711 + Missense_Mutation SNP T T C novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . GAST NM_000805 exon2 c.T23C p.V8A TGTATGTGCTGAT . 36.0 19.0 45.0 0.0 . 13 . . Atlas-SNP ATXN7L3 56970 hgsc.bcm.edu hg19 17 42271987 42271987 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . ATXN7L3 NM_020218 exon11 c.A814T p.S272C CCTGGCTGTCAGT . 42.0 14.0 59.0 0.0 . 31 . . Atlas-SNP COL1A1 1277 hgsc.bcm.edu hg19 17 48263006 48263006 + Missense_Mutation SNP G G C novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . COL1A1 NM_000088 exon51 c.C4252G p.H1418D CGGTGTGACTCTG . 66.0 12.0 89.0 0.0 . 158 . . Atlas-SNP CACNA1G 8913 hgsc.bcm.edu hg19 17 48653340 48653340 + Missense_Mutation SNP C C G novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . CACNA1G NM_001256360 exon8 c.C1577G p.A526G GGGATGCCAATGG . 88.0 7.0 97.0 0.0 . 659 . . Atlas-SNP MFSD11 79157 hgsc.bcm.edu hg19 17 74737121 74737121 + Missense_Mutation SNP A A C novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . MFSD11 NM_001242536 exon4 c.A235C p.M79L CTCTCTATGTTTG . 59.0 29.0 87.0 0.0 . 47 . . Atlas-SNP AZI1 22994 hgsc.bcm.edu hg19 17 79167868 79167868 + Nonsense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . AZI1 NM_014984 exon18 c.A2179T p.K727X GGCTCTTGAGCCT . 133.0 6.0 157.0 0.0 . 145 . . Atlas-SNP SMCHD1 23347 hgsc.bcm.edu hg19 18 2762178 2762178 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . SMCHD1 NM_015295 exon36 c.A4510T p.N1504Y GTTTCAAATGTTC . 181.0 51.0 177.0 0.0 . 88 . . Atlas-SNP ASXL3 80816 hgsc.bcm.edu hg19 18 31319940 31319940 + Missense_Mutation SNP A A G novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . ASXL3 NM_030632 exon11 c.A2572G p.T858A GCTTCTACTGAAA . 101.0 45.0 115.0 0.0 . 405 . . Atlas-SNP ZNF396 252884 hgsc.bcm.edu hg19 18 32953553 32953553 + Silent SNP T T C novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . ZNF396 NM_145756 exon3 c.A429G p.G143G CCTTCGTCCAAAA . 72.0 4.0 73.0 0.0 . 28 . . Atlas-SNP EPG5 57724 hgsc.bcm.edu hg19 18 43497668 43497668 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 EPG5,NS,carcinoma,0,1 EPG5 NM_020964 exon17 c.A3215T p.Q1072L TAATACTGGCAAG . 174.0 72.0 196.0 0.0 . 199 . . Atlas-SNP KEAP1 9817 hgsc.bcm.edu hg19 19 10610421 10610421 + Nonsense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . KEAP1 NM_012289 exon2 c.A289T p.K97X CCACCTTGTGGGC . 48.0 36.0 90.0 0.0 . 182 . . Atlas-SNP YIPF2 78992 hgsc.bcm.edu hg19 19 11034009 11034009 + Missense_Mutation SNP G G C rs151256467 byfrequency;alternate_allele TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 YIPF2,bladder,carcinoma,0,1 YIPF2 NM_024029 exon9 c.C909G p.I303M CAGCGCGATGTTT . 65.0 34.0 108.0 0.0 . 13 . G|1.000;A|0.000 Atlas-SNP RFX1 5989 hgsc.bcm.edu hg19 19 14104453 14104453 + Missense_Mutation SNP G G A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . RFX1 NM_002918 exon2 c.C203T p.P68L CCACCCGGTGGCT . 105.0 7.0 123.0 0.0 . 63 . . Atlas-SNP SYDE1 85360 hgsc.bcm.edu hg19 19 15221086 15221086 + Silent SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . SYDE1 NM_033025 exon3 c.T1002A p.L334L GGTGCTTGCGTGG . 51.0 16.0 46.0 0.0 . 44 . . Atlas-SNP RYR1 6261 hgsc.bcm.edu hg19 19 38973749 38973749 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . RYR1 NM_001042723 exon32 c.A4703T p.Q1568L GGAAGCAGAAGGT . 78.0 35.0 85.0 0.0 . 708 . . Atlas-SNP DEDD2 162989 hgsc.bcm.edu hg19 19 42713986 42713986 + Missense_Mutation SNP G G A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . DEDD2 NM_133328 exon4 c.C455T p.P152L GTTGGGGGGGAGC . 96.0 37.0 111.0 0.0 . 16 . . Atlas-SNP ZNF226 7769 hgsc.bcm.edu hg19 19 44674186 44674186 + Splice_Site SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . . . . . . TTTCCTAGTTCAG . 60.0 30.0 73.0 0.0 . . . . Atlas-SNP ZNF285 26974 hgsc.bcm.edu hg19 19 44891202 44891202 + Missense_Mutation SNP C C G novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 ZNF285,NS,carcinoma,0,2 ZNF285 NM_152354 exon4 c.G1205C p.C402S TCACTGCATTTGT . 47.0 3.0 53.0 1.0 . 86 . . Atlas-SNP ZNF285 26974 hgsc.bcm.edu hg19 19 44891217 44891217 + Missense_Mutation SNP T T C novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 ZNF285,NS,carcinoma,0,2 ZNF285 NM_152354 exon4 c.A1190G p.E397G GGCTTCTCTCCAG . 45.0 3.0 52.0 0.0 . 86 . . Atlas-SNP EXOC3L2 90332 hgsc.bcm.edu hg19 19 45731442 45731442 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . EXOC3L2 NM_138568 exon3 c.T173A p.L58Q TGGGCCAGGCTGC . 85.0 34.0 125.0 0.0 . 30 . . Atlas-SNP IGFL1 374918 hgsc.bcm.edu hg19 19 46733033 46733033 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . IGFL1 NM_198541 exon1 c.T2A p.M1K GAGCCATGGCTCC . 70.0 31.0 83.0 0.0 . 10 . . Atlas-SNP DKKL1 27120 hgsc.bcm.edu hg19 19 49868854 49868854 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . DKKL1 NM_014419 exon3 c.A272T p.Q91L AGAACCAGGAGCA . 78.0 38.0 88.0 0.0 . 23 . . Atlas-SNP CCDC155 147872 hgsc.bcm.edu hg19 19 49901341 49901341 + Silent SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . CCDC155 NM_144688 exon7 c.T570A p.A190A GACAGCTGAGGAG . 116.0 51.0 151.0 0.0 . 46 . . Atlas-SNP SIGLEC11 114132 hgsc.bcm.edu hg19 19 50463581 50463581 + Nonsense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . SIGLEC11 NM_052884 exon3 c.T558A p.C186X GGCTGGACATTTC . 267.0 59.0 263.0 0.0 . 70 . . Atlas-SNP DEFB129 140881 hgsc.bcm.edu hg19 20 210384 210384 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . DEFB129 NM_080831 exon2 c.T524A p.L175Q CATCACTGGAGCT . 36.0 12.0 52.0 0.0 . 24 . . Atlas-SNP PAK7 57144 hgsc.bcm.edu hg19 20 9560941 9560941 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . PAK7 NM_177990 exon4 c.A841T p.T281S GCATGGTGGGCTG . 156.0 69.0 153.0 0.0 . 194 . . Atlas-SNP C20orf26 26074 hgsc.bcm.edu hg19 20 20071622 20071622 + Splice_Site SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . C20orf26 NM_015585 exon7 c.699+2T>A . GTGAGGTCAGTGA . 95.0 40.0 118.0 0.0 . 188 . . Atlas-SNP CEP250 11190 hgsc.bcm.edu hg19 20 34091356 34091356 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . CEP250 NM_007186 exon30 c.A5159T p.Q1720L AAGCACAGCGCGG . 113.0 41.0 141.0 0.0 . 141 . . Atlas-SNP SPINT3 10816 hgsc.bcm.edu hg19 20 44141486 44141486 + Splice_Site SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . SPINT3 NM_006652 exon3 c.77-2A>T . AGTGTCTGAAGAG . 44.0 21.0 58.0 0.0 . 12 . . Atlas-SNP ARFGAP1 55738 hgsc.bcm.edu hg19 20 61916216 61916216 + Splice_Site SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . ARFGAP1 NM_018209 exon10 c.718-2A>T . TCCTACAGGCGTC . 66.0 22.0 47.0 0.0 . 38 . . Atlas-SNP COL20A1 57642 hgsc.bcm.edu hg19 20 61943819 61943819 + Silent SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . COL20A1 NM_020882 exon15 c.T1851A p.S617S TCTCTCTTCCTCC . 56.0 19.0 48.0 0.0 . 137 . . Atlas-SNP TCEA2 6919 hgsc.bcm.edu hg19 20 62701907 62701907 + Silent SNP C C T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . TCEA2 NM_003195 exon8 c.C738T p.H246H AGAGCACCAGATG . 230.0 70.0 233.0 0.0 . 22 . . Atlas-SNP SLC7A4 6545 hgsc.bcm.edu hg19 22 21384217 21384217 + Nonsense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . SLC7A4 NM_004173 exon3 c.T1406A p.L469X CCATCCAAGAAGC . 81.0 29.0 93.0 0.0 . 50 . . Atlas-SNP CSF2RB 1439 hgsc.bcm.edu hg19 22 37333867 37333867 + Missense_Mutation SNP G G T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . CSF2RB NM_000395 exon14 c.G2017T p.G673C GGGGGAGGCCCTG . 53.0 26.0 63.0 0.0 . 104 . . Atlas-SNP LMF2 91289 hgsc.bcm.edu hg19 22 50943406 50943406 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . LMF2 NM_033200 exon10 c.A1262T p.Y421F TAGGAGTACGGCA . 105.0 36.0 147.0 0.0 . 40 . . Atlas-SNP MXRA5 25878 hgsc.bcm.edu hg19 X 3241470 3241470 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . MXRA5 NM_015419 exon5 c.A2256T p.K752N TGGTTCTTTTTCC . 62.0 51.0 65.0 0.0 . 815 . . Atlas-SNP GPM6B 2824 hgsc.bcm.edu hg19 X 13803759 13803759 + Missense_Mutation SNP T T A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . GPM6B NM_001001995 exon3 c.A350T p.H117L AAGGCATGGTCAC . 216.0 191.0 250.0 0.0 . 46 . . Atlas-SNP GRPR 2925 hgsc.bcm.edu hg19 X 16170727 16170727 + Missense_Mutation SNP A A T novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . GRPR NM_005314 exon3 c.A1114T p.S372C ACCTTTAGCCTCA . 68.0 53.0 83.0 0.0 . 51 . . Atlas-SNP CYLC1 1538 hgsc.bcm.edu hg19 X 83128059 83128059 + Missense_Mutation SNP T T C novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . CYLC1 NM_021118 exon4 c.T343C p.Y115H GCAGAATATAAAA . 256.0 221.0 326.0 1.0 . 272 . . Atlas-SNP L1CAM 3897 hgsc.bcm.edu hg19 X 153128941 153128941 + Missense_Mutation SNP C C A novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . L1CAM NM_000425 exon26 c.G3521T p.G1174V TACTCGCCGAAGG . 122.0 105.0 143.0 0.0 . 189 . . Atlas-SNP ZNF248 57209 hgsc.bcm.edu hg19 10 38121875 38121875 + Frame_Shift_Del DEL G G - novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . ZNF248 NM_021045 exon6 c.409delT p.Y137fs . . 153.0 63.0 199.0 0.0 . 61 . . Atlas-INDEL ADORA2A 135 hgsc.bcm.edu hg19 22 24836866 24836878 + Frame_Shift_Del DEL GCCGGGGGAGCGG GCCGGGGGAGCGG - novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 GCCGGGGGAGCGG GCCGGGGGAGCGG . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . ADORA2A NM_000675 exon3 c.647_659del p.216_220del . . 43.0 15.0 74.0 0.0 . 44 . . Atlas-INDEL TP53 7157 hgsc.bcm.edu hg19 17 7577595 7577598 + Frame_Shift_Del DEL CAGT CAGT - novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 CAGT CAGT . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 TP53_ENST00000545858,bile_duct,carcinoma,-1,1 TP53 NM_001126112 exon7 c.684_687del p.228_229del . . 32.0 21.0 92.0 0.0 . 33396 . . Atlas-INDEL KIAA0586 9786 hgsc.bcm.edu hg19 14 58965625 58965627 + In_Frame_Del DEL TGG TGG - novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 TGG TGG . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . KIAA0586 NM_001244189 exon29 c.4273_4275del p.1425_1425del . . 103.0 31.0 104.0 0.0 . 180 . . Atlas-INDEL CELSR2 1952 hgsc.bcm.edu hg19 1 109812061 109812061 + Frame_Shift_Del DEL G G - novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . CELSR2 NM_001408 exon21 c.6827delC p.P2276fs . . 43.0 21.0 62.0 0.0 . 228 . . Atlas-INDEL NTRK1 4914 hgsc.bcm.edu hg19 1 156838011 156838011 + Frame_Shift_Del DEL C C - novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . NTRK1 NM_002529 exon5 c.543delG p.G181fs . . 59.0 11.0 38.0 0.0 . 287 . . Atlas-INDEL LOC100131825 0 hgsc.bcm.edu hg19 1 159166681 159166681 + RNA DEL C C - novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . . . . . . . . 180.0 56.0 130.0 0.0 . . . . Atlas-INDEL MASP2 10747 hgsc.bcm.edu hg19 1 11087660 11087686 + In_Frame_Del DEL CCTCCATATATACGCCCTCCTGTTGTG CCTCCATATATACGCCCTCCTGTTGTG - novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 CCTCCATATATACGCCCTCCTGTTGTG CCTCCATATATACGCCCTCCTGTTGTG . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . MASP2 NM_006610 exon11 c.1318_1344del p.440_448del . . 85.0 19.0 146.0 0.0 . 71 . . Atlas-INDEL COL20A1 57642 hgsc.bcm.edu hg19 20 61948029 61948038 + Frame_Shift_Del DEL GACAAGACGG GACAAGACGG - novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 GACAAGACGG GACAAGACGG . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . COL20A1 NM_020882 exon21 c.2648_2657del p.883_886del . . 49.0 13.0 29.0 0.0 . 137 . . Atlas-INDEL SPAG17 200162 hgsc.bcm.edu hg19 1 118539254 118539254 + Frame_Shift_Del DEL T T - novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . SPAG17 NM_206996 exon33 c.4890delT p.N1630fs . . 191.0 91.0 186.0 0.0 . 263 . . Atlas-INDEL KIAA0586 9786 hgsc.bcm.edu hg19 14 58965630 58965631 + Frame_Shift_Del DEL CA CA - novel TCGA-DD-AACQ-01A-11D-A40R-10 TCGA-DD-AACQ-10A-01D-A40U-10 CA CA . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq e5ad554e-26df-4b28-bf84-a689d77c2602 90e3ca3e-5517-4d7e-a1da-204704c66280 . KIAA0586 NM_001244189 exon29 c.4278_4279del p.1426_1427del . . 101.0 31.0 102.0 0.0 . 180 . . Atlas-INDEL