Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COSMIC_Codon COSMIC_Gene TranscriptID Exon ChromChange AAChange Genome_Plus_Minus_10_Bp Drug_Target TTotCov TVarCov NTotCov NVarCov dbSNPPopFreq COSMIC_Gene_Freq ABCA13 154664 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 48506582 48506582 + Missense_Mutation SNP G G A rs201934902 TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ABCA13 NM_152701 exon44 c.G12845A p.R4282H TCACCCGTGTGCT . 60.0 17.0 55.0 0.0 G|0.999;A|0.000 521 ABCA6 23460 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 67084357 67084357 + Missense_Mutation SNP T T A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ABCA6 NM_080284 exon28 c.A3649T p.M1217L GTTCCATGCATCT . 54.0 12.0 58.0 0.0 . 159 ABCC8 6833 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 17418528 17418528 + Missense_Mutation SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ABCC8 NM_000352 exon33 c.C4054T p.R1352C CGTAGCGCACGCT . 81.0 26.0 99.0 0.0 . 91 ACACB 32 ucsc.edu;bcgsc.ca 37 12 109679059 109679059 + Silent SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ACACB NM_001093 exon35 c.A4995G p.K1665K CTACAAAGAAGTG . 31.0 4.0 42.0 0.0 . 98 ACCS 84680 ucsc.edu;bcgsc.ca 37 11 44089461 44089461 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ACCS NM_032592 exon2 c.C284A p.P95H AGAACCCCAGTGT . 40.0 5.0 37.0 0.0 . 155 ACO2 50 ucsc.edu;bcgsc.ca 37 22 41914547 41914547 + Missense_Mutation SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ACO2 NM_001098 exon8 c.G1003A p.D335N CATTATGACCAAC . 42.0 4.0 54.0 0.0 . 290 ACTN1 87 ucsc.edu;bcgsc.ca 37 14 69347583 69347583 + Missense_Mutation SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ACTN1 NM_001102 exon17 c.C2077A p.Q693K TGAGCTGGTGGTC . 57.0 5.0 47.0 0.0 . 514 ACVRL1 94 ucsc.edu;bcgsc.ca 37 12 52309921 52309921 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ACVRL1 NM_000020 exon8 c.C1150A p.Q384K GACGAGCAGATCC . 21.0 4.0 27.0 0.0 . 521 ADAMTS18 170692 ucsc.edu;bcgsc.ca 37 16 77369704 77369704 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ADAMTS18 NM_199355 exon12 c.G1808T p.R603L CATGTCCGGGAAC . 20.0 4.0 42.0 0.0 . 1036 ADARB2 105 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 1284338 1284338 + Missense_Mutation SNP A A C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ADARB2 NM_018702 exon5 c.T1217G p.V406G GCCACGACCTGCG . 16.0 5.0 26.0 1.0 . 153 ADAT1 23536 ucsc.edu;bcgsc.ca 37 16 75646506 75646506 + Silent SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ADAT1 NM_012091 exon7 c.C678T p.I226I TGGTGAGATTGGG . 43.0 4.0 64.0 0.0 . 92 ADCY10 55811 hgsc.bcm.edu;bcgsc.ca 37 1 167802265 167802267 + In_Frame_Del DEL GAA GAA - novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 GAA GAA . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ADCY10 NM_018417 exon25 c.3551_3553del p.1184_1185del CATAATGAAAGTG . 122.0 28.0 103.0 0.0 . 493 ADSSL1 122622 ucsc.edu;bcgsc.ca 37 14 105207562 105207562 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ADSSL1 NM_199165 exon8 c.C904A p.L302I GCCGCCCTCCTCG . 36.0 4.0 33.0 0.0 . 515 AKAP12 9590 ucsc.edu;bcgsc.ca 37 6 151672032 151672032 + Missense_Mutation SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . AKAP12 NM_005100 exon4 c.G2506A p.A836T ACAGGGGCCAACG . 58.0 5.0 75.0 0.0 . 293 AKAP1 8165 ucsc.edu;bcgsc.ca 37 17 55184293 55184293 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . AKAP1 NM_001242902 exon3 c.T1468C p.C490R GTCACCTGCATGT . 38.0 4.0 39.0 0.0 . 227 AKIRIN1 79647 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 39463936 39463936 + Missense_Mutation SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . AKIRIN1 NM_024595 exon2 c.C314T p.S105L GTGCTTCGGAAAG . 38.0 24.0 68.0 0.0 . 90 AMBRA1 55626 ucsc.edu;bcgsc.ca 37 11 46419099 46419099 + Silent SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . AMBRA1 NM_001267782 exon20 c.A3807G p.P1269P GAGGGTTGGTCCC . 39.0 4.0 39.0 0.0 . 136 AMER3 205147 ucsc.edu;bcgsc.ca 37 2 131520641 131520641 + Silent SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . . NM_152698 exon2 c.C996T p.P332P AGGCCCCCAGGGG . 30.0 4.0 37.0 0.0 . . AMT 275 ucsc.edu;bcgsc.ca 37 3 49459665 49459665 + Missense_Mutation SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . AMT NM_001164712 exon2 c.G130A p.A44T CGTGGGCCAGGTG . 27.0 5.0 40.0 0.0 . 91 ANKHD1 54882 hgsc.bcm.edu;bcgsc.ca 37 5 139903797 139903798 + Frame_Shift_Ins INS - - G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ANKHD1 NM_017747 exon25 c.4464_4465insG p.D1488fs AGAGGATGAAGAT . 478.0 160.0 410.0 0.0 . 185 ANKLE2 23141 ucsc.edu;bcgsc.ca 37 12 133303866 133303866 + Missense_Mutation SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ANKLE2 NM_015114 exon13 c.C2779T p.R927C TCCTGCGGAGCTG . 19.0 4.0 29.0 0.0 . 68 ARHGAP35 2909 broad.mit.edu;ucsc.edu;bcgsc.ca 37 19 47422780 47422780 + Missense_Mutation SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . . NM_004491 exon1 c.G848A p.R283H TGAGTCGCATTGT . 20.0 8.0 23.0 0.0 . . ARHGEF10L 55160 ucsc.edu;bcgsc.ca 37 1 17907119 17907119 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ARHGEF10L NM_018125 exon2 c.C29A p.P10H CACAGCCTGCCAT . 23.0 4.0 49.0 0.0 . 292 ARHGEF40 55701 ucsc.edu;bcgsc.ca 37 14 21550107 21550107 + Missense_Mutation SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ARHGEF40 NM_018071 exon14 c.C3080T p.A1027V CAGAAGCAGAGGG . 34.0 4.0 36.0 0.0 . 228 ARID1A 8289 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 1 27101342 27101342 + Nonsense_Mutation SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c ARID1A,NS,carcinoma,0 ARID1A NM_006015 exon18 c.G4624T p.E1542X AACCACGAAGGCT . 50.0 36.0 79.0 0.0 . 584 ASB2 51676 ucsc.edu;bcgsc.ca 37 14 94405781 94405781 + Silent SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ASB2 NM_001202429 exon8 c.G1290A p.L430L TTGCAGCAGCAGC . 32.0 4.0 36.0 0.0 . 228 ATG2A 23130 ucsc.edu;bcgsc.ca 37 11 64664266 64664266 + Silent SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ATG2A NM_015104 exon38 c.C5226A p.P1742P CAGGCCGGGCAGC . 44.0 4.0 30.0 0.0 . 69 ATP13A1 57130 ucsc.edu;bcgsc.ca 37 19 19756683 19756683 + Silent SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ATP13A1 NM_020410 exon24 c.A3360G p.K1120K CCTTACTTTGTAA . 44.0 4.0 30.0 0.0 . 138 ATP4A 495 ucsc.edu;bcgsc.ca 37 19 36043982 36043982 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ATP4A NM_000704 exon18 c.A2708G p.D903G TGGTGGTCCTCCC . 36.0 4.0 39.0 0.0 . 91 AXIN1 8312 broad.mit.edu;bcgsc.ca 37 16 339439 339439 + Splice_Site SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . AXIN1 NM_181050 exon10 c.2354+1G>A . CACTCACCTGTAG . 15.0 8.0 23.0 0.0 . 684 BCMO1 53630 ucsc.edu;bcgsc.ca 37 16 81295852 81295852 + Missense_Mutation SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . BCMO1 NM_017429 exon4 c.G435T p.R145S CATCAGGAAAATC . 29.0 5.0 60.0 0.0 . 90 BCOR 54880 hgsc.bcm.edu;bcgsc.ca 37 X 39922119 39922119 + Silent SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . BCOR NM_001123385 exon9 c.C4053A p.T1351T GTTGTCGGTGTAT . 183.0 8.0 183.0 0.0 . 229 BEST4 266675 ucsc.edu;bcgsc.ca 37 1 45253103 45253103 + Missense_Mutation SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . BEST4 NM_153274 exon2 c.C188A p.A63D ACCTGAGCATACA . 35.0 4.0 63.0 0.0 . 91 BRCA1 672 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 41228578 41228578 + Missense_Mutation SNP C C G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . BRCA1 NM_007300 exon14 c.G4474C p.G1492R AAAGGCCTTCTGG . 75.0 29.0 81.0 0.0 . 3415 BRD8 10902 ucsc.edu;bcgsc.ca 37 5 137481515 137481515 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . BRD8 NM_139199 exon24 c.A3331G p.T1111A GGAGAGTCTTCTT . 54.0 5.0 66.0 0.0 . 91 C10orf10 11067 ucsc.edu;bcgsc.ca 37 10 45473438 45473438 + Missense_Mutation SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . C10orf10 NM_007021 exon2 c.C41T p.T14I CGAATTGTGGGCA . 30.0 4.0 35.0 0.0 . 90 C15orf39 56905 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 75498804 75498804 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . C15orf39 NM_015492 exon2 c.T415C p.C139R CCTCTGTGCTATG . 53.0 22.0 55.0 0.0 . 90 C15orf55 256646 ucsc.edu;bcgsc.ca 37 15 34649666 34649666 + Missense_Mutation SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . C15orf55 NM_175741 exon7 c.A3373G p.R1125G GGCAGAAGGAAGA . 26.0 4.0 25.0 0.0 . 206 C17orf49 124944 ucsc.edu;bcgsc.ca 37 17 6919194 6919194 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . C17orf49 NM_174893 exon3 c.T218C p.V73A GGACAGTGTGAGG . 27.0 4.0 29.0 0.0 . 135 CACNA1A 773 broad.mit.edu;mdanderson.org 37 19 13410090 13410090 + Nonsense_Mutation SNP A A T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . CACNA1A NM_001127221 exon19 c.T2360A p.L787X GCCAGCAAGTTCT . 14.0 7.0 8.0 0.0 . 67 CACNA1A 773 ucsc.edu;bcgsc.ca 37 19 13363877 13363877 + Silent SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . CACNA1A NM_001127221 exon30 c.G4797T p.R1599R GAACACCCGCAGG . 36.0 4.0 59.0 0.0 . 67 CAPN11 11131 ucsc.edu;bcgsc.ca 37 6 44150676 44150676 + Splice_Site SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . CAPN11 NM_007058 exon20 c.1939-2A>G . CTCTTCAGGACAT . 42.0 4.0 49.0 0.0 . 136 CBFA2T3 863 ucsc.edu;bcgsc.ca 37 16 88958805 88958805 + Silent SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . CBFA2T3 NM_005187 exon4 c.C468T p.S156S GGCTGTGGACGAG . 32.0 4.0 62.0 0.0 . 722 CCDC77 84318 ucsc.edu;bcgsc.ca 37 12 550073 550073 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . CCDC77 NM_032358 exon12 c.C1231A p.R411S TTGGAGCGTCGAC . 25.0 4.0 30.0 0.0 . 91 CCDC83 220047 ucsc.edu;bcgsc.ca 37 11 85597247 85597247 + Missense_Mutation SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . CCDC83 NM_173556 exon5 c.G348A p.M116I AGATATGCGCATG . 37.0 4.0 49.0 0.0 . 91 CD163L1 283316 ucsc.edu;bcgsc.ca 37 12 7519864 7519864 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . CD163L1 NM_174941 exon18 c.A4247G p.K1416R TCTCTCTTGAGGC . 26.0 4.0 35.0 0.0 . 100 CD27 939 ucsc.edu;bcgsc.ca 37 12 6560517 6560517 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . CD27 NM_001242 exon6 c.C742A p.Q248K CCCATCCAGGAGG . 32.0 4.0 59.0 0.0 . 659 CDC45 8318 ucsc.edu;bcgsc.ca 37 22 19486623 19486623 + Splice_Site SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . CDC45 NM_001178011 exon8 c.516-1G>T . CTTCCAGGTGGGC . 37.0 4.0 38.0 0.0 . 227 CDH23 64072 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 73491946 73491946 + Silent SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . CDH23 NM_022124 exon31 c.G3918A p.E1306E CAACGAGCTGGAC . 39.0 15.0 32.0 0.0 . 563 CDK5RAP2 55755 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 123199606 123199606 + Silent SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . CDK5RAP2 NM_018249 exon25 c.C3922T p.L1308L CCAGCAGCTCAGC . 67.0 33.0 89.0 0.0 . 229 CDKL2 8999 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 76551045 76551045 + Missense_Mutation SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . CDKL2 NM_003948 exon2 c.T128C p.M43T TTAACCATTTTGT . 133.0 54.0 104.0 0.0 . 454 CECR5 27440 ucsc.edu;bcgsc.ca 37 22 17626008 17626008 + Splice_Site SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . CECR5 NM_017829 exon5 c.354-1G>T . CCCAGTCTGGAGC . 26.0 5.0 22.0 0.0 . 514 CENPC1 1060 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 68396566 68396566 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . CENPC1 NM_001812 exon5 c.G298T p.V100F CTACAACAAACTG . 66.0 18.0 57.0 0.0 . 205 CHST10 9486 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 101014572 101014572 + Silent SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . CHST10 NM_004854 exon5 c.C225T p.L75L CTGAACGAGCTGG . 29.0 18.0 25.0 0.0 . 91 CILP2 148113 ucsc.edu;bcgsc.ca 37 19 19653699 19653699 + Missense_Mutation SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . CILP2 NM_153221 exon6 c.G895A p.E299K CACCCTGAGTCCC . 43.0 4.0 32.0 0.0 . 91 CIRH1A 84916 ucsc.edu;bcgsc.ca 37 16 69167467 69167467 + Silent SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . CIRH1A NM_032830 exon2 c.A105G p.R35R TTCACGAACAGAT . 37.0 4.0 57.0 0.0 . 90 CLTCL1 8218 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 19168279 19168279 + Missense_Mutation SNP T T A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . CLTCL1 NM_007098 exon31 c.A4868T p.E1623V TGCTCCTCTTGCT . 55.0 26.0 58.0 0.0 . 230 CLVS2 134829 broad.mit.edu;ucsc.edu;mdanderson.org 37 6 123319163 123319163 + Nonsense_Mutation SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . CLVS2 NM_001010852 exon2 c.C241T p.Q81X CGGCAGCAGAACC . 14.0 12.0 30.0 0.0 . 27 COL11A2 1302 ucsc.edu;bcgsc.ca 37 6 33146492 33146492 + Silent SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . COL11A2 NM_080680 exon18 c.T1683C p.D561D GAGTCCATCAAAA . 30.0 4.0 43.0 0.0 . 95 COL12A1 1303 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 75855116 75855116 + Missense_Mutation SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . COL12A1 NM_004370 exon25 c.C4616T p.T1539M TACTCCGTGTTGG . 24.0 17.0 34.0 0.0 . 142 COL20A1 57642 ucsc.edu;bcgsc.ca 37 20 61944481 61944481 + Missense_Mutation SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . COL20A1 NM_020882 exon17 c.G2089T p.G697W GTCCCAGGGAACC . 43.0 4.0 37.0 0.0 . 90 COL6A6 131873 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 130282231 130282231 + Missense_Mutation SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . COL6A6 NM_001102608 exon2 c.G384T p.K128N AGACAAGAAACAG . 75.0 36.0 86.0 0.0 . 76 CORO1B 57175 ucsc.edu;bcgsc.ca 37 11 67210047 67210047 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . CORO1B NM_020441 exon2 c.A53G p.Q18R ACCGGCTGCCCGA . 43.0 4.0 49.0 0.0 . 108 CRLF1 9244 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 19 18707746 18707746 + Nonsense_Mutation SNP T T A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . CRLF1 NM_004750 exon5 c.A811T p.K271X GGTATTTGGCTTG . 51.0 16.0 88.0 0.0 . 514 CTTN 2017 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 70260723 70260723 + Missense_Mutation SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . CTTN NM_001184740 exon6 c.G367A p.G123S TTCGGAGGCAAGT . 100.0 34.0 100.0 0.0 . 227 CXorf21 80231 ucsc.edu;bcgsc.ca 37 X 30578387 30578387 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . CXorf21 NM_025159 exon3 c.G86T p.G29V TTTTCCCCAGCCA . 47.0 4.0 54.0 0.0 . 131 CYP4F3 4051 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 19 15758035 15758046 + In_Frame_Del DEL AAAGTGGAGCCG AAAGTGGAGCCG - novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 AAAGTGGAGCCG AAAGTGGAGCCG . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . CYP4F3 NM_001199209 exon5 c.426_437del p.142_146del TGGTGAAAAGTGG . 49.0 12.0 68.0 0.0 . 93 DDHD1 80821 ucsc.edu;bcgsc.ca 37 14 53618979 53618979 + Missense_Mutation SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . DDHD1 NM_001160147 exon1 c.C838A p.Q280K ACTCACGGTTCCA . 35.0 4.0 30.0 0.0 . 92 DGKE 8526 broad.mit.edu;bcgsc.ca;mdanderson.org 37 17 54912182 54912182 + Missense_Mutation SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . DGKE NM_003647 exon2 c.C26T p.P9L CGGCGCCGGGCTC . 33.0 13.0 39.0 0.0 . 289 DIP2A 23181 ucsc.edu;bcgsc.ca 37 21 47966886 47966886 + Missense_Mutation SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . DIP2A NM_206890 exon21 c.G2453T p.R818I TTCGCAGACACAA . 43.0 4.0 55.0 0.0 . 24 DLL1 28514 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 170592756 170592756 + Silent SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . DLL1 NM_005618 exon9 c.G1611A p.E537E CTGGCCCTCTAGC . 22.0 11.0 36.0 0.0 . 659 DMD 1756 ucsc.edu;bcgsc.ca 37 X 31462650 31462650 + Missense_Mutation SNP G G T rs143925896 byfrequency;alternate_allele TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . DMD NM_004006 exon60 c.C9032A p.P3011Q TTATACGGTGAGA . 33.0 4.0 39.0 0.0 G|1.000;A|0.000 265 DNAH10 196385 ucsc.edu;bcgsc.ca 37 12 124416000 124416000 + Silent SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . DNAH10 NM_207437 exon73 c.G12543T p.L4181L CCTGCTGGAGCTG . 32.0 5.0 38.0 0.0 . 95 DNAH17 8632 ucsc.edu;bcgsc.ca 37 17 76528759 76528759 + Silent SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . DNAH17 NM_173628 exon20 c.C2919A p.V973V ATTGATGACCAGG . 40.0 4.0 47.0 1.0 . 142 DSCAML1 57453 ucsc.edu;bcgsc.ca 37 11 117389233 117389233 + Silent SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . DSCAML1 NM_020693 exon7 c.A1638G p.T546T CCGCGCTGTGCAC . 35.0 4.0 71.0 0.0 . 159 EFHC2 80258 ucsc.edu;bcgsc.ca 37 X 44109452 44109452 + Silent SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . EFHC2 NM_025184 exon5 c.T846C p.S282S TAGCTTACTCCTC . 35.0 4.0 59.0 0.0 . 135 ELAVL3 1995 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 11577475 11577475 + Silent SNP G G A rs201270169 TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ELAVL3 NM_032281 exon2 c.C177T p.F59F GCTGCCGAAGAGA . 90.0 50.0 123.0 0.0 G|0.999;A|0.001 92 EP300 2033 ucsc.edu;bcgsc.ca 37 22 41545854 41545854 + Silent SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . EP300 NM_001429 exon14 c.T2469C p.P823P GCTTCCTCAACCA . 44.0 4.0 38.0 0.0 . 2011 ETV2 2116 ucsc.edu;bcgsc.ca 37 19 36135135 36135135 + Splice_Site SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ETV2 NM_014209 exon6 c.716-2A>G . TCCCGCAGGTCCC . 36.0 4.0 26.0 0.0 . 226 EVPL 2125 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 74015070 74015070 + Silent SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . EVPL NM_001988 exon11 c.C1209A p.A403A CAGAGGGGCCACA . 108.0 21.0 69.0 1.0 . 93 EXOC1 55763 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 56744128 56744128 + Missense_Mutation SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . EXOC1 NM_018261 exon9 c.A1120G p.T374A GAACTGACTTTAC . 71.0 24.0 60.0 0.0 . 950 FAM108B1 51104 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 74481719 74481719 + Missense_Mutation SNP T T G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . FAM108B1 NM_016014 exon4 c.A851C p.E284A ACCAGTTCCTGTG . 31.0 12.0 40.0 0.0 . 90 FAM129B 64855 ucsc.edu;bcgsc.ca 37 9 130286041 130286041 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . FAM129B NM_022833 exon5 c.A506G p.H169R TAGTAGTGACGCG . 54.0 6.0 42.0 0.0 . 68 FAM208B 54906 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 5791794 5791794 + Missense_Mutation SNP A A T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . . NM_017782 exon15 c.A6410T p.D2137V TAAATGATGTTTC . 22.0 11.0 23.0 0.0 . . FAM220A 84792 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 6370386 6370386 + Missense_Mutation SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . . NM_001037163 exon2 c.G400A p.G134R TGGGCCCTCCTCC . 45.0 14.0 32.0 0.0 . . FAM92B 339145 ucsc.edu;bcgsc.ca 37 16 85133800 85133800 + Missense_Mutation SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . FAM92B NM_198491 exon7 c.G698A p.R233Q AGCAGCCGAGTGT . 34.0 4.0 54.0 0.0 . 90 FAT3 120114 ucsc.edu;bcgsc.ca 37 11 92087171 92087171 + Silent SNP T T A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . FAT3 NM_001008781 exon1 c.T1893A p.G631G TTCTGGTGTTTTA . 43.0 4.0 41.0 0.0 . 73 FATE1 89885 ucsc.edu;bcgsc.ca 37 X 150889963 150889963 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . FATE1 NM_033085 exon3 c.C331A p.H111N CGTTTCCATTATG . 64.0 6.0 61.0 0.0 . 131 FBXL6 26233 ucsc.edu;bcgsc.ca 37 8 145579629 145579629 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . FBXL6 NM_012162 exon8 c.A1471G p.S491G CTGACCTGACAGT . 34.0 4.0 53.0 0.0 . 658 FBXO11 80204 ucsc.edu;bcgsc.ca 37 2 48035495 48035495 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . FBXO11 NM_001190274 exon22 c.A2627G p.H876R ACATCATGTCCCT . 48.0 4.0 76.0 0.0 . 659 FBXW11 23291 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 5 171296743 171296743 + Missense_Mutation SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . FBXW11 NM_012300 exon11 c.G1457A p.R486H AATGTGCGCAAAC . 46.0 22.0 48.0 0.0 . 272 FGFR1OP 11116 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 167438330 167438330 + Silent SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . FGFR1OP NM_007045 exon9 c.A867G p.L289L CCCCTTAAAAAGT . 30.0 23.0 80.0 0.0 . 683 FLRT2 23768 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 14 86089513 86089513 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . FLRT2 NM_013231 exon2 c.T1655C p.I552T CGGTGATATTTGT . 72.0 25.0 88.0 0.0 . 94 FOSL2 2355 ucsc.edu;bcgsc.ca 37 2 28626982 28626982 + Silent SNP G G T rs200198308 TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . FOSL2 NM_005253 exon2 c.G111T p.R37R ATTCCGGGTAGAT . 46.0 5.0 33.0 0.0 G|0.999;T|0.001 712 GCKR 2646 ucsc.edu;bcgsc.ca 37 2 27728690 27728690 + Missense_Mutation SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . GCKR NM_001486 exon10 c.G856T p.A286S GGCATTGCAGCAT . 24.0 4.0 27.0 0.0 . 92 GCKR 2646 ucsc.edu;bcgsc.ca 37 2 27741799 27741799 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . GCKR NM_001486 exon17 c.C1567A p.L523M GCCATGCTGCAGG . 37.0 4.0 55.0 0.0 . 92 GLG1 2734 ucsc.edu;bcgsc.ca 37 16 74516980 74516980 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . GLG1 NM_001145667 exon10 c.G1614T p.M538I TTCTACCATCTTC . 22.0 4.0 39.0 0.0 . 136 GPAM 57678 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 113928263 113928263 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . GPAM NM_020918 exon11 c.G914T p.R305L TGCTGTCGAAGTA . 54.0 10.0 55.0 0.0 . 92 GPCPD1 56261 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 5579378 5579378 + Missense_Mutation SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . GPCPD1 NM_019593 exon3 c.G139A p.G47S TTTCACCTGTGTC . 82.0 30.0 73.0 0.0 . 90 GPR113 165082 ucsc.edu;bcgsc.ca 37 2 26536706 26536706 + Missense_Mutation SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . GPR113 NM_001145168 exon8 c.G1198A p.D400N TGGTGTCAGCCAT . 43.0 4.0 41.0 0.0 . 94 GPR137 56834 ucsc.edu;bcgsc.ca 37 11 64055319 64055319 + Silent SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . GPR137 NM_001170726 exon5 c.G708T p.V236V CCTGGTGAGCGAC . 58.0 5.0 61.0 0.0 . 68 GPR162 27239 ucsc.edu;bcgsc.ca 37 12 6934781 6934781 + Missense_Mutation SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . GPR162 NM_019858 exon3 c.G1000A p.V334M GCCGACGTGCGCA . 46.0 4.0 45.0 0.0 . 92 GRIK1 2897 ucsc.edu;bcgsc.ca 37 21 30968883 30968883 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . GRIK1 NM_000830 exon9 c.G1214T p.G405V ACTTCGCCAGCAG . 21.0 4.0 45.0 0.0 . 137 GRIN2A 2903 ucsc.edu;bcgsc.ca 37 16 9943615 9943615 + Silent SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . GRIN2A NM_000833 exon6 c.C1326T p.I442I TCACTTGATTTTG . 38.0 4.0 66.0 0.0 . 349 GRM8 2918 broad.mit.edu;ucsc.edu;bcgsc.ca 37 7 126542650 126542650 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . GRM8 NM_000845 exon5 c.G1102T p.G368C TGCAGCCAAAATT . 66.0 26.0 76.0 1.0 . 581 GRM8 2918 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 7 126542649 126542649 + Missense_Mutation SNP C C A rs78947184 alternate_allele TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . GRM8 NM_000845 exon5 c.G1103T p.G368V TTGCAGCCAAAAT . 66.0 28.0 77.0 0.0 C|0.995;T|0.005 581 GRPR 2925 ucsc.edu;bcgsc.ca 37 X 16142451 16142451 + Silent SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . GRPR NM_005314 exon1 c.G375T p.G125G TGTTGGGGTGTCT . 47.0 4.0 51.0 1.0 . 565 GSTO2 119391 ucsc.edu;bcgsc.ca 37 10 106035008 106035008 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . GSTO2 NM_001191013 exon3 c.C59A p.P20Q CAGTCCCGGAGGG . 37.0 4.0 40.0 0.0 . 91 HDC 3067 ucsc.edu;bcgsc.ca 37 15 50545863 50545863 + Missense_Mutation SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . HDC NM_002112 exon7 c.G721A p.V241I CACAGACCTAGGG . 27.0 4.0 22.0 0.0 . 156 HEG1 57493 ucsc.edu;bcgsc.ca 37 3 124724109 124724109 + Silent SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . HEG1 NM_020733 exon9 c.G3297T p.T1099T ACTTACCGTTTTG . 43.0 4.0 34.0 0.0 . 70 HERC2 8924 ucsc.edu;bcgsc.ca 37 15 28386583 28386583 + Missense_Mutation SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . HERC2 NM_004667 exon78 c.G12010A p.G4004R CCTTCCCATCAGC . 43.0 4.0 37.0 0.0 . 234 HIF1AN 55662 ucsc.edu;bcgsc.ca 37 10 102306918 102306918 + Missense_Mutation SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . HIF1AN NM_017902 exon7 c.A916G p.I306V AAGAGAATTGAAT . 31.0 4.0 30.0 0.0 . 226 HK3 3101 broad.mit.edu;bcgsc.ca;mdanderson.org 37 5 176317835 176317835 + Silent SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . HK3 NM_002115 exon5 c.G522A p.T174T CAAGCCCGTCTGG . 23.0 7.0 35.0 0.0 . 294 HLA-B 3106 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 6 31324160 31324161 + Frame_Shift_Ins INS - - A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . HLA-B NM_005514 exon3 c.403_404insT p.R135fs GCCCGCGGAGGAG . 40.0 13.0 46.0 0.0 . 90 HMGN2P46 283651 ucsc.edu;mdanderson.org 37 15 45848235 45848235 + RNA SNP T T A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . . . . . . GCTTTTTTTTTTT . 62.0 17.0 55.0 0.0 . . HSPA1L 3305 ucsc.edu;bcgsc.ca 37 6 31778553 31778553 + Silent SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . HSPA1L NM_005527 exon2 c.T1197C p.A399A CAGGGGAGCCACG . 42.0 5.0 47.0 0.0 . 230 HTR1A 3350 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 63256420 63256420 + Missense_Mutation SNP T T A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . HTR1A NM_000524 exon1 c.A1127T p.H376L GGCATGTGGCAGC . 63.0 24.0 61.0 0.0 . 94 HTR2C 3358 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 X 114141874 114141874 + Nonsense_Mutation SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . HTR2C NM_000868 exon6 c.G1273T p.E425X GTGATCGAGAAAG . 196.0 74.0 216.0 0.0 . 133 IKZF3 22806 ucsc.edu;bcgsc.ca 37 17 37922281 37922281 + Missense_Mutation SNP G G T rs114183106 by1000genomes;alternate_allele TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . IKZF3 NM_012481 exon8 c.C1292A p.P431Q ATGGGCGGGGGCT . 63.0 7.0 64.0 0.0 G|0.995;A|0.005 971 IL18R1 8809 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 102988510 102988510 + Missense_Mutation SNP A A C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . IL18R1 NM_003855 exon3 c.A400C p.K134Q GTTAAAAAATTTT . 178.0 65.0 190.0 0.0 . 93 IL31RA 133396 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 55202077 55202077 + Missense_Mutation SNP G G C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . IL31RA NM_001242637 exon9 c.G1213C p.E405Q TCCTGGGAATCTG . 54.0 25.0 57.0 0.0 . 91 INO80E 283899 ucsc.edu;bcgsc.ca 37 16 30012145 30012145 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . INO80E NM_173618 exon4 c.C272A p.P91Q ACACACCGGCCCC . 21.0 4.0 27.0 0.0 . 91 ITGA1 3672 broad.mit.edu;mdanderson.org 37 5 52084218 52084218 + Missense_Mutation SNP G G C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ITGA1 NM_181501 exon1 c.G31C p.V11L CCAGGGGTCGCTG . 14.0 6.0 16.0 0.0 . 228 JAG2 3714 broad.mit.edu;bcgsc.ca;mdanderson.org 37 14 105611364 105611364 + Missense_Mutation SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . JAG2 NM_002226 exon24 c.G2987A p.R996H AGGGAGCGGATCC . 49.0 21.0 55.0 1.0 . 846 JAK2 3717 ucsc.edu;bcgsc.ca 37 9 5064935 5064935 + Missense_Mutation SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . JAK2 NM_004972 exon9 c.A1109G p.D370G TAATTGATGGATA . 42.0 4.0 49.0 0.0 . 75307 KAZALD1 81621 ucsc.edu;bcgsc.ca 37 10 102824163 102824163 + Silent SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . KAZALD1 NM_030929 exon3 c.C657A p.P219P TGACCCCCACATC . 37.0 4.0 33.0 0.0 . 90 KCNS1 3787 ucsc.edu;bcgsc.ca 37 20 43723974 43723974 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . KCNS1 NM_002251 exon5 c.A1118G p.Y373C TCACGGTAGCTGT . 31.0 4.0 33.0 0.0 . 90 KDM2B 84678 ucsc.edu;bcgsc.ca 37 12 121878722 121878722 + Missense_Mutation SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . KDM2B NM_032590 exon21 c.C3507A p.S1169R ACTGGAGCTGCAA . 41.0 4.0 52.0 1.0 . 638 KIAA0146 23514 ucsc.edu;bcgsc.ca 37 8 48625238 48625238 + Silent SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . KIAA0146 NM_001080394 exon15 c.G1992A p.L664L TCTGCTGCTTCTG . 56.0 5.0 57.0 0.0 . 68 KIAA1755 85449 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 36874514 36874514 + Silent SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . KIAA1755 NM_001029864 exon2 c.C18T p.L6L TGTGTCGAGGGAT . 26.0 10.0 28.0 0.0 . 95 KIF18B 146909 ucsc.edu;bcgsc.ca 37 17 43013645 43013645 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . KIF18B NM_001264573 exon2 c.A68G p.D23G TGACTGTCCAGCT . 21.0 4.0 23.0 0.0 . 70 KRT36 8689 ucsc.edu;bcgsc.ca 37 17 39646095 39646095 + Missense_Mutation SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . KRT36 NM_003771 exon1 c.C22A p.P8T AGGTAGGGGTGCA . 41.0 4.0 35.0 0.0 . 90 KRT6A 3853 ucsc.edu;bcgsc.ca 37 12 52881662 52881662 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . KRT6A NM_005554 exon9 c.A1537G p.S513G AGCTGCTTCCTCC . 49.0 4.0 52.0 0.0 . 27 LAMC3 10319 ucsc.edu;bcgsc.ca 37 9 133954597 133954597 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . LAMC3 NM_006059 exon23 c.C3839A p.A1280E CAGTTGCATCATG . 43.0 4.0 38.0 0.0 . 93 LCMT1 51451 ucsc.edu;bcgsc.ca 37 16 25139863 25139863 + Missense_Mutation SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . LCMT1 NM_016309 exon2 c.A181G p.R61G AAAGAGAGGAAAG . 32.0 5.0 42.0 0.0 . 22 LIPI 149998 ucsc.edu;bcgsc.ca 37 21 15558358 15558358 + Missense_Mutation SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . LIPI NM_198996 exon3 c.C528A p.F176L ACCTATGAAATGA . 35.0 4.0 74.0 0.0 . 70 LRIF1 55791 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 111494007 111494007 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . LRIF1 NM_018372 exon2 c.A1499G p.K500R CTTCCTTTTCTAG . 128.0 44.0 135.0 0.0 . 93 LRP4 4038 ucsc.edu;bcgsc.ca 37 11 46897041 46897041 + Missense_Mutation SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . LRP4 NM_002334 exon27 c.G3891A p.M1297I CATGTCCATGAGG . 21.0 4.0 26.0 0.0 . 94 LRRC4 64101 ucsc.edu;bcgsc.ca 37 7 127669957 127669957 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . LRRC4 NM_022143 exon2 c.A737G p.K246R CAGAGCTTCTTGA . 45.0 4.0 41.0 0.0 . 154 MATR3 9782 broad.mit.edu;bcgsc.ca;mdanderson.org 37 5 138643894 138643894 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . MATR3 NM_018834 exon2 c.T790C p.S264P GAGAGATCTCTCT . 79.0 35.0 52.0 1.0 . 91 ME3 10873 ucsc.edu;bcgsc.ca 37 11 86161034 86161034 + Missense_Mutation SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ME3 NM_006680 exon10 c.G1028A p.G343D GCAATGCCCATAG . 30.0 4.0 28.0 0.0 . 515 MEI1 150365 ucsc.edu;bcgsc.ca 37 22 42128267 42128267 + Missense_Mutation SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . MEI1 NM_152513 exon10 c.G1115A p.R372K TGGTGAGGAGCCT . 25.0 4.0 40.0 0.0 . 70 MFI2 4241 ucsc.edu;bcgsc.ca 37 3 196743126 196743126 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . MFI2 NM_005929 exon8 c.A1015G p.T339A CATAGGTCTGTGT . 39.0 4.0 35.0 0.0 . 90 MFNG 4242 ucsc.edu;bcgsc.ca 37 22 37875474 37875474 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . MFNG NM_002405 exon4 c.G470T p.R157I AAGGCTCTCAGAA . 44.0 4.0 60.0 0.0 . 658 MORN1 79906 ucsc.edu;bcgsc.ca 37 1 2317315 2317315 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . MORN1 NM_024848 exon5 c.G380T p.R127L CCATCCCGGTCCA . 34.0 4.0 78.0 1.0 . 92 MST1 4485 ucsc.edu;bcgsc.ca 37 3 49722242 49722242 + Silent SNP T T A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . MST1 NM_020998 exon15 c.A1698T p.L566L CCGCTGTAGGCTT . 56.0 5.0 70.0 0.0 . 278 MTMR4 9110 ucsc.edu;mdanderson.org 37 17 56573314 56573314 + Missense_Mutation SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . MTMR4 NM_004687 exon16 c.G2189A p.G730E GCTGGTCCCTTAG . 19.0 9.0 15.0 0.0 . 91 MTX3 345778 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 79287047 79287047 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . . NM_001010891 exon1 c.G15T p.L5F GAGTTCCAAGGGG . 26.0 14.0 27.0 0.0 . . MUC16 94025 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 9057886 9057886 + Missense_Mutation SNP C C G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . MUC16 NM_024690 exon3 c.G29560C p.V9854L TGAAAACAGTGGT . 91.0 40.0 92.0 0.0 . 566 MUTYH 4595 ucsc.edu;bcgsc.ca 37 1 45798502 45798502 + Missense_Mutation SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . MUTYH NM_001128425 exon7 c.T509C p.V170A TGATTCACCTCCT . 50.0 5.0 91.0 1.0 . 1083 MXRA7 439921 ucsc.edu;bcgsc.ca 37 17 74684251 74684251 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . MXRA7 NM_001008529 exon2 c.A350G p.E117G TCCTGCTCCTCTT . 44.0 5.0 50.0 1.0 . 90 MYH1 4619 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 10404676 10404676 + Silent SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . MYH1 NM_005963 exon27 c.C3489A p.A1163A AATCTGGGCTGAG . 40.0 26.0 100.0 0.0 . 171 MYH4 4622 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 17 10353951 10353951 + Frame_Shift_Del DEL C C - novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . MYH4 NM_017533 exon30 c.4000delG p.A1334fs CATGGGCCAGAGT . 31.0 18.0 49.0 0.0 . 102 MYL6 4637 ucsc.edu;bcgsc.ca 37 12 56553889 56553889 + Silent SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . MYL6 NM_079423 exon4 c.C306A p.G102G AAATGGCACCGTC . 35.0 5.0 51.0 0.0 . 91 MYO1A 4640 ucsc.edu;bcgsc.ca 37 12 57441109 57441109 + Silent SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . MYO1A NM_005379 exon5 c.A408G p.L136L AGACTGTAGCAGC . 42.0 4.0 40.0 0.0 . 231 MYOM2 9172 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 2024362 2024362 + Missense_Mutation SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . MYOM2 NM_003970 exon11 c.G1262A p.R421Q TGGACCGGTGAGC . 57.0 17.0 79.0 0.0 . 95 NDST3 9348 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 118975959 118975959 + Silent SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . NDST3 NM_004784 exon2 c.A894G p.T298T GCTGACATTGTCC . 60.0 23.0 69.0 0.0 . 153 NEURL4 84461 ucsc.edu;bcgsc.ca 37 17 7232370 7232370 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . NEURL4 NM_001005408 exon1 c.A262G p.T88A GGACGGTGAAGAC . 11.0 4.0 19.0 0.0 . 46 NFKB1 4790 ucsc.edu;bcgsc.ca 37 4 103528881 103528881 + Missense_Mutation SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . NFKB1 NM_003998 exon19 c.A2200G p.R734G TCCACCAGGCTGG . 22.0 4.0 40.0 0.0 . 912 NHSL1 57224 ucsc.edu;bcgsc.ca 37 6 138754407 138754407 + Missense_Mutation SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . NHSL1 NM_020464 exon5 c.G1087A p.G363S GGTGACCTCTCTG . 37.0 4.0 64.0 0.0 . 68 NRXN1 9378 ucsc.edu;bcgsc.ca 37 2 50847255 50847255 + Missense_Mutation SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . NRXN1 NM_001135659 exon9 c.G1345A p.G449R CAGACCCCAGCAT . 38.0 4.0 51.0 0.0 . 92 NTRK3 4916 ucsc.edu;bcgsc.ca 37 15 88727470 88727470 + Silent SNP G G T rs201222990 alternate_allele TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . NTRK3 NM_001243101 exon4 c.C309A p.T103T AAGTCCGGTGTAG . 41.0 4.0 45.0 0.0 G|0.999;A|0.001 3538 NTSR2 23620 ucsc.edu;bcgsc.ca 37 2 11798785 11798785 + Silent SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . NTSR2 NM_012344 exon4 c.A1053G p.S351S CACAGCTGAGCTG . 46.0 4.0 60.0 1.0 . 946 NUF2 83540 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 163325198 163325198 + Missense_Mutation SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . NUF2 NM_145697 exon14 c.A1334G p.Y445C ACTCCTATGCTAA . 272.0 65.0 207.0 0.0 . 231 NUP210L 91181 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 154042865 154042865 + Missense_Mutation SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . NUP210L NM_001159484 exon17 c.T2438C p.F813S GAACTGAAATTAT . 142.0 47.0 121.0 0.0 . 77 OPLAH 26873 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 8 145112593 145112593 + Missense_Mutation SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . OPLAH NM_017570 exon10 c.G1180A p.A394T GATTAGCATCCGT . 48.0 22.0 58.0 0.0 . 68 OPN4 94233 ucsc.edu;bcgsc.ca 37 10 88419195 88419195 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . OPN4 NM_001030015 exon6 c.T803C p.F268S ACATCTTCATCTT . 45.0 4.0 51.0 0.0 . 69 OR13H1 347468 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 130678192 130678192 + Missense_Mutation SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . OR13H1 NM_001004486 exon1 c.A145G p.I49V TTTCTTATTCACT . 243.0 89.0 210.0 1.0 . 108 OR1N1 138883 ucsc.edu;bcgsc.ca 37 9 125288752 125288752 + Missense_Mutation SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . OR1N1 NM_012363 exon1 c.C821A p.A274E TACATTGCAGCTG . 40.0 4.0 43.0 0.0 . 133 OR8H1 219469 broad.mit.edu;bcgsc.ca;mdanderson.org 37 11 56057883 56057883 + Missense_Mutation SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . OR8H1 NM_001005199 exon1 c.C656A p.S219Y AGAATGGACACAT . 98.0 39.0 79.0 1.0 . 71 PABPC3 5042 ucsc.edu;bcgsc.ca 37 13 25671638 25671638 + Missense_Mutation SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . PABPC3 NM_030979 exon1 c.G1302T p.Q434H TGCTCAGGGTGCC . 53.0 5.0 65.0 0.0 . 72 PAN2 9924 ucsc.edu;bcgsc.ca 37 12 56713721 56713721 + Missense_Mutation SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . PAN2 NM_001127460 exon21 c.C2885T p.P962L ATCAGTGGAATAA . 42.0 4.0 35.0 0.0 . 702 PAPL 0 broad.mit.edu;ucsc.edu;mdanderson.org 37 19 39591841 39591841 + Missense_Mutation SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . . NM_001004318 exon9 c.A967G p.K323E TTCTACAAATATG . 43.0 19.0 17.0 0.0 . . PATE1 160065 ucsc.edu;bcgsc.ca 37 11 125616219 125616219 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . PATE1 NM_138294 exon1 c.T20C p.L7P TCTTGCTGGAACT . 54.0 5.0 38.0 0.0 . 90 PC 5091 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 66618382 66618382 + Silent SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . PC NM_000920 exon17 c.C2236T p.L746L TCAGCAGCCCGGC . 35.0 17.0 60.0 0.0 . 228 PDCD11 22984 ucsc.edu;bcgsc.ca 37 10 105178381 105178381 + Missense_Mutation SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . PDCD11 NM_014976 exon15 c.A2096G p.E699G AGAGCGAGGGGCG . 31.0 5.0 40.0 1.0 . 275 PF4V1 5197 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 74719566 74719566 + Missense_Mutation SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . PF4V1 NM_002620 exon2 c.G167A p.R56K GTCCCAGGCACAT . 62.0 23.0 58.0 0.0 . 90 PIK3R4 30849 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 130427320 130427320 + Missense_Mutation SNP T T A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . PIK3R4 NM_014602 exon10 c.A2348T p.E783V TCTTCCTCTTCCT . 200.0 78.0 163.0 0.0 . 1471 PIK3R5 23533 ucsc.edu;bcgsc.ca 37 17 8790506 8790506 + Silent SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . PIK3R5 NM_001142633 exon12 c.C1812A p.T604T GTCATTGGTGCTC . 30.0 5.0 70.0 0.0 . 1146 PLCL1 5334 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 198950752 198950752 + Silent SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . PLCL1 NM_006226 exon2 c.G2511A p.E837E CATGGAGCACGTA . 112.0 47.0 127.0 1.0 . 228 PLEKHG1 57480 ucsc.edu;bcgsc.ca 37 6 151152713 151152713 + Missense_Mutation SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . PLEKHG1 NM_001029884 exon16 c.G2466A p.M822I GTCTATGCCTCAT . 27.0 4.0 38.0 0.0 . 92 PLIN2 123 ucsc.edu;bcgsc.ca 37 9 19126218 19126218 + Silent SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . PLIN2 NM_001122 exon3 c.T120C p.Y40Y GTAGGGATACTGG . 42.0 4.0 37.0 0.0 . 92 PLOD1 5351 ucsc.edu;bcgsc.ca 37 1 12027091 12027091 + Silent SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . PLOD1 NM_000302 exon16 c.T1698C p.C566C GGCCTGTGATGAG . 42.0 4.0 99.0 0.0 . 155 PLXDC1 57125 ucsc.edu;bcgsc.ca 37 17 37263727 37263727 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . PLXDC1 NM_020405 exon6 c.A644G p.D215G CCCTTGTCTTCCC . 39.0 4.0 29.0 0.0 . 93 PPM1H 57460 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 63083509 63083509 + Silent SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . PPM1H NM_020700 exon8 c.C1215T p.Y405Y TTTAATGTAGATG . 40.0 15.0 45.0 0.0 . 637 PRMT6 55170 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 107599362 107599362 + Missense_Mutation SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . PRMT6 NM_018137 exon1 c.C25T p.L9F AGAAAGCTTGAGT . 34.0 14.0 37.0 0.0 . 90 PRPF38B 55119 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 109242492 109242492 + Silent SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . PRPF38B NM_018061 exon6 c.T1491C p.S497S AAAATCTAGAAAG . 206.0 75.0 183.0 0.0 . 90 PRPF8 10594 ucsc.edu;bcgsc.ca 37 17 1561917 1561917 + Missense_Mutation SNP T T A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . PRPF8 NM_006445 exon33 c.A5279T p.E1760V TAAGGCTCAGTGG . 39.0 4.0 77.0 0.0 . 525 PRR26 414235 ucsc.edu;bcgsc.ca 37 10 708851 708851 + RNA SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . . . . . . CACTCTCGGGAGA . 73.0 7.0 112.0 0.0 . . PSMD11 5717 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 30806343 30806343 + Silent SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . PSMD11 NM_002815 exon10 c.C987T p.N329N TGATAACTTACTA . 106.0 20.0 63.0 0.0 . 91 PSTPIP1 9051 ucsc.edu;bcgsc.ca 37 15 77310573 77310573 + Missense_Mutation SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . PSTPIP1 NM_003978 exon2 c.G121A p.E41K ATGGAGGAGCTAC . 33.0 4.0 33.0 0.0 . 23 PTPDC1 138639 ucsc.edu;bcgsc.ca 37 9 96860152 96860152 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . PTPDC1 NM_001253829 exon6 c.T1304C p.L435P AGTGCCTTCAACC . 36.0 4.0 30.0 0.0 . 227 PTPN13 5783 ucsc.edu;bcgsc.ca 37 4 87684048 87684048 + Missense_Mutation SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . PTPN13 NM_080683 exon24 c.A3722G p.E1241G TGCGGGAAGGAAG . 39.0 4.0 55.0 0.0 . 230 RAB12 201475 broad.mit.edu;bcgsc.ca 37 18 8633188 8633188 + Missense_Mutation SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . RAB12 NM_001025300 exon3 c.G289T p.D97Y CTTAGGGACACAG . 77.0 6.0 52.0 0.0 . 68 RAB25 57111 ucsc.edu;bcgsc.ca 37 1 156035736 156035736 + Silent SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . RAB25 NM_020387 exon2 c.C78A p.T26T GAAGACCAATCTA . 44.0 5.0 37.0 0.0 . 227 RAPSN 5913 ucsc.edu;bcgsc.ca 37 11 47463162 47463162 + Splice_Site SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . RAPSN NM_005055 exon6 c.912+1G>T . ACCTCACCTTGTC . 57.0 5.0 63.0 0.0 . 91 RASGRF1 5923 ucsc.edu;bcgsc.ca 37 15 79339094 79339094 + Missense_Mutation SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . RASGRF1 NM_001145648 exon5 c.T872C p.L291P CTGTTCAGGAAGA . 38.0 4.0 81.0 0.0 . 662 RBM48 84060 ucsc.edu;bcgsc.ca 37 7 92163819 92163819 + Missense_Mutation SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . . NM_032120 exon4 c.G552T p.L184F TGCTTTGAACACT . 39.0 4.0 58.0 0.0 . . RC3H1 149041 broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 173912722 173912722 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . RC3H1 NM_172071 exon17 c.A2993G p.E998G TTTGCCTCCCTCT . 54.0 6.0 35.0 0.0 . 92 RELB 5971 ucsc.edu;bcgsc.ca 37 19 45525332 45525332 + Missense_Mutation SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . RELB . . . . GGGCTGCGGGAGG . 39.0 4.0 39.0 0.0 . 847 RGS9 8787 ucsc.edu;bcgsc.ca 37 17 63193341 63193341 + Missense_Mutation SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . RGS9 NM_003835 exon13 c.C958T p.L320F TACTTCCTCAAGA . 45.0 6.0 31.0 0.0 . 94 ROS1 6098 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 117718163 117718163 + Silent SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ROS1 NM_002944 exon7 c.C694T p.L232L TGATCAGCCTTAA . 51.0 39.0 113.0 1.0 . 1353 RPS6KA3 6197 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 20206011 20206011 + Missense_Mutation SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . RPS6KA3 NM_004586 exon9 c.C709T p.P237S CTTCTGGAGCCAT . 177.0 71.0 202.0 0.0 . 1504 RUNDC1 146923 ucsc.edu;bcgsc.ca 37 17 41143436 41143436 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . RUNDC1 NM_173079 exon5 c.C1545A p.S515R ACAGAGCCTACTG . 36.0 4.0 26.0 0.0 . 90 RUSC2 9853 ucsc.edu;bcgsc.ca 37 9 35555121 35555121 + Silent SNP C C T rs149030772 byfrequency TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . RUSC2 NM_014806 exon3 c.C2079T p.P693P ACTGCCCATCCAG . 29.0 4.0 33.0 0.0 C|1.000;T|0.000 91 RYR1 6261 ucsc.edu;bcgsc.ca 37 19 38939397 38939397 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . RYR1 NM_001042723 exon11 c.C1066A p.L356I CTGTGGCTCACCT . 36.0 5.0 38.0 0.0 . 100 SCN2B 6327 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 118037718 118037718 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . SCN2B NM_004588 exon4 c.A532G p.M178V CCACCATCAGCAC . 59.0 20.0 65.0 1.0 . 90 SCNN1B 6338 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 23366664 23366664 + Silent SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . SCNN1B NM_000336 exon4 c.T630C p.S210S CACCAGTGCTACC . 34.0 29.0 74.0 0.0 . 157 SEMA6D 80031 ucsc.edu;bcgsc.ca 37 15 48063850 48063850 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . SEMA6D NM_153618 exon19 c.C3090A p.S1030R GAGCAGCTACACC . 59.0 5.0 31.0 0.0 . 138 SENP6 26054 ucsc.edu;bcgsc.ca 37 6 76376473 76376473 + Missense_Mutation SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . SENP6 NM_015571 exon10 c.G1040T p.R347I CTAACAGAAGAGA . 34.0 4.0 39.0 0.0 . 660 SESN2 83667 ucsc.edu;bcgsc.ca 37 1 28599950 28599950 + Missense_Mutation SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . SESN2 NM_031459 exon6 c.A832G p.T278A GAGGGGACGTCCC . 33.0 4.0 59.0 0.0 . 230 SETDB2 83852 ucsc.edu;bcgsc.ca 37 13 50051084 50051084 + Missense_Mutation SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . SETDB2 NM_031915 exon7 c.A814G p.R272G AAGTACAGAAAGA . 38.0 5.0 30.0 0.0 . 91 SFI1 9814 ucsc.edu;bcgsc.ca 37 22 32009157 32009157 + Silent SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . SFI1 NM_001007467 exon25 c.G2520T p.A840A GCGGGCGACAGTG . 24.0 5.0 36.0 0.0 . 90 SIX2 10736 ucsc.edu;bcgsc.ca 37 2 45235966 45235966 + Missense_Mutation SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . SIX2 NM_016932 exon1 c.C284A p.A95E TTCTCCGCCTCGA . 46.0 4.0 41.0 0.0 . 91 SLC26A4 5172 broad.mit.edu;bcgsc.ca 37 7 107315422 107315422 + Missense_Mutation SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . SLC26A4 NM_000441 exon6 c.A633G p.I211M ATTCATAGTGAGG . 101.0 7.0 88.0 0.0 . 96 SLC30A1 7779 broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 211751520 211751520 + Silent SNP G G C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . SLC30A1 NM_021194 exon1 c.C435G p.G145G GCCGTGGCCGGAG . 19.0 9.0 30.0 0.0 . 93 SLC35C1 55343 ucsc.edu;bcgsc.ca 37 11 45827722 45827722 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . SLC35C1 NM_018389 exon1 c.T370C p.F124L GTGGTCTTCATCG . 25.0 4.0 22.0 0.0 . 90 SLC39A8 64116 ucsc.edu;bcgsc.ca 37 4 103180632 103180632 + Missense_Mutation SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . SLC39A8 NM_001135147 exon10 c.C1306T p.H436Y GTAAATGAAGTTG . 56.0 5.0 54.0 0.0 . 90 SLC4A4 8671 broad.mit.edu;bcgsc.ca 37 4 72423587 72423587 + Silent SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . SLC4A4 NM_001098484 exon22 c.C2922A p.I974I TGCTATCATTTTT . 90.0 7.0 91.0 0.0 . 95 SMC5 23137 ucsc.edu;bcgsc.ca 37 9 72912940 72912940 + Missense_Mutation SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . SMC5 NM_015110 exon9 c.G1112T p.R371M GACAGAGGAGAAT . 44.0 4.0 37.0 0.0 . 229 SORCS2 57537 ucsc.edu;bcgsc.ca 37 4 7730138 7730138 + Silent SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . SORCS2 NM_020777 exon22 c.C2931A p.T977T CAACACCCCTGAG . 35.0 4.0 30.0 0.0 . 91 SP1 6667 ucsc.edu;bcgsc.ca 37 12 53775988 53775988 + Missense_Mutation SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . SP1 NM_138473 exon3 c.A257G p.Q86R CGAGTCAGTCAGG . 37.0 4.0 29.0 0.0 . 228 STAB2 55576 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 104118857 104118857 + Silent SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c STAB2,NS,carcinoma,0 STAB2 NM_017564 exon45 c.C4788T p.R1596R CTGCCGCGGCAGC . 32.0 18.0 52.0 0.0 . 104 STAT5A 6776 ucsc.edu;bcgsc.ca 37 17 40461433 40461433 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . STAT5A NM_003152 exon19 c.C2153A p.A718D GCAGCGCCACGTA . 40.0 4.0 60.0 1.0 . 846 STK32C 282974 ucsc.edu;bcgsc.ca 37 10 134036201 134036201 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . STK32C NM_173575 exon10 c.A1195G p.K399E GCTTCTTCTTCTT . 43.0 4.0 47.0 0.0 . 1083 STRIP2 57464 ucsc.edu;bcgsc.ca 37 7 129122681 129122681 + Splice_Site SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . . NM_001134336 exon20 c.2050-2A>G . ATGAACAGATGCT . 59.0 5.0 41.0 0.0 . . STXBP5L 9515 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 120876465 120876465 + Missense_Mutation SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . STXBP5L NM_014980 exon9 c.A868G p.I290V ACCACAATTCCAC . 51.0 12.0 70.0 0.0 . 77 SUV420H1 51111 ucsc.edu;bcgsc.ca 37 11 67942644 67942644 + Silent SNP C C T rs140940573 byfrequency TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . SUV420H1 NM_017635 exon5 c.G384A p.R128R AATAGGCCTAAAT . 38.0 4.0 52.0 0.0 C|0.999;T|0.001 228 SYNE1 23345 ucsc.edu;bcgsc.ca 37 6 152697950 152697950 + Missense_Mutation SNP T T A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . SYNE1 NM_033071 exon57 c.A9128T p.Y3043F CCACTGTAGGTAC . 35.0 4.0 47.0 0.0 . 607 SYT16 83851 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 62550927 62550927 + Missense_Mutation SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . SYT16 NM_031914 exon5 c.C1448T p.P483L GGTCTCCGCTCAG . 57.0 27.0 55.0 0.0 . 23 TACC2 10579 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 123846141 123846141 + Missense_Mutation SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . TACC2 NM_206862 exon4 c.A4126G p.R1376G ATGGAGAGGATGG . 52.0 7.0 46.0 0.0 . 296 TCEANC2 127428 ucsc.edu;bcgsc.ca 37 1 54561960 54561960 + Missense_Mutation SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . TCEANC2 NM_153035 exon5 c.G441T p.M147I TTAGATGGATCAC . 39.0 4.0 73.0 0.0 . 91 TECTA 7007 ucsc.edu;bcgsc.ca 37 11 121008141 121008141 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . TECTA NM_005422 exon10 c.C2953A p.P985T GAGTGCCCAGAGA . 38.0 4.0 39.0 0.0 . 225 TET3 200424 ucsc.edu;bcgsc.ca 37 2 74317138 74317138 + Silent SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . . NM_144993 exon5 c.T2598C p.P866P GACACCTCGCAAG . 36.0 4.0 49.0 0.0 . . TJP2 9414 ucsc.edu;bcgsc.ca 37 9 71864355 71864355 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . TJP2 NM_001170416 exon20 c.T3038C p.L1013P ATCAACTTAGGGA . 43.0 4.0 54.0 0.0 . 115 TMPRSS15 5651 ucsc.edu;bcgsc.ca 37 21 19670135 19670135 + Missense_Mutation SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . TMPRSS15 NM_002772 exon19 c.C2177T p.S726L TTTGATGAGTTTC . 29.0 4.0 47.0 0.0 . 160 TNFAIP8L2 79626 ucsc.edu;bcgsc.ca 37 1 151131649 151131649 + Missense_Mutation SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . TNFAIP8L2 NM_024575 exon2 c.T476C p.L159P CGGCCCTCTATGG . 32.0 4.0 23.0 0.0 . 90 TNRC18 84629 ucsc.edu;bcgsc.ca 37 7 5364783 5364783 + Missense_Mutation SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . TNRC18 NM_001080495 exon20 c.C6244A p.L2082M CGGTCAGGGAGCT . 47.0 4.0 56.0 0.0 . 46 TNRC6A 27327 ucsc.edu;bcgsc.ca 37 16 24816374 24816374 + Missense_Mutation SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . TNRC6A NM_014494 exon14 c.G4024T p.A1342S ACAGCAGCACAAC . 22.0 4.0 35.0 0.0 . 92 TOX3 27324 ucsc.edu;bcgsc.ca 37 16 52497937 52497937 + Missense_Mutation SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . TOX3 NM_001080430 exon3 c.T317C p.F106S GGGGGAAACTGGG . 43.0 4.0 73.0 0.0 . 68 TRPC4 7223 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 38248410 38248410 + Silent SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . TRPC4 NM_003306 exon5 c.C1329T p.S443S ATATAAGGAGTTC . 106.0 40.0 106.0 0.0 . 159 TRPM2 7226 ucsc.edu;bcgsc.ca 37 21 45859038 45859038 + Missense_Mutation SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . TRPM2 NM_003307 exon30 c.A4256G p.K1419R TGCTGAAGTGCGG . 45.0 4.0 64.0 0.0 . 92 TSPAN14 81619 ucsc.edu;bcgsc.ca 37 10 82276005 82276005 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . TSPAN14 NM_030927 exon8 c.C667A p.Q223K TGCATCCAGGCGC . 41.0 4.0 38.0 0.0 . 91 TSPAN3 10099 ucsc.edu;bcgsc.ca 37 15 77339189 77339189 + Silent SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . TSPAN3 NM_005724 exon7 c.A750G p.G250G ATAGGTTCCGCCA . 44.0 4.0 38.0 0.0 . 90 TSPAN7 7102 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 38525510 38525510 + Missense_Mutation SNP G G C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . TSPAN7 NM_004615 exon2 c.G217C p.G73R GTCTTTGGCCTGT . 121.0 43.0 92.0 0.0 . 63 UBA1 7317 ucsc.edu;bcgsc.ca 37 X 47065756 47065756 + Silent SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . UBA1 NM_153280 exon16 c.G1851A p.S617S AGAGTCGTACAGT . 43.0 4.0 36.0 0.0 . 227 UGGT1 56886 ucsc.edu;bcgsc.ca 37 2 128918817 128918817 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . UGGT1 NM_020120 exon25 c.C2800A p.Q934K CATATTCAACAGC . 35.0 4.0 40.0 0.0 . 91 UNC13A 23025 ucsc.edu;bcgsc.ca 37 19 17753723 17753723 + Silent SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . UNC13A NM_001080421 exon19 c.C2403T p.H801H ACTGATGTGGAGC . 33.0 4.0 34.0 0.0 . 25 VPS13D 55187 ucsc.edu;bcgsc.ca 37 1 12379555 12379555 + Silent SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . VPS13D NM_015378 exon32 c.T7416C p.G2472G TCCAGGTACGGAG . 41.0 5.0 54.0 0.0 . 95 WDFY3 23001 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 85663040 85663040 + Silent SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . WDFY3 NM_014991 exon38 c.A6108G p.G2036G GTAGCTTCCTCCA . 93.0 38.0 86.0 0.0 . 93 XKR5 389610 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 6681084 6681084 + Missense_Mutation SNP A A T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . XKR5 NM_207411 exon4 c.T596A p.L199Q TAGAACAGAACCA . 85.0 35.0 82.0 0.0 . 90 XPNPEP1 7511 ucsc.edu;bcgsc.ca 37 10 111642310 111642310 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . XPNPEP1 NM_001167604 exon10 c.G921T p.Q307H ATGCACCTGGATC . 47.0 4.0 44.0 0.0 . 94 XRCC2 7516 ucsc.edu;bcgsc.ca 37 7 152346389 152346389 + Missense_Mutation SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . XRCC2 NM_005431 exon3 c.C181A p.L61I CTGTTAGGTGATA . 40.0 4.0 32.0 0.0 . 1084 ZCCHC6 79670 ucsc.edu;bcgsc.ca 37 9 88958022 88958022 + Missense_Mutation SNP C C A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ZCCHC6 NM_024617 exon6 c.G1054T p.D352Y TTACATCCGAATT . 45.0 4.0 47.0 0.0 . 92 ZDHHC13 54503 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 19172329 19172329 + Missense_Mutation SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ZDHHC13 NM_019028 exon6 c.A575G p.K192R CTCACAAAGTAAT . 149.0 51.0 147.0 1.0 . 90 ZEB1 6935 ucsc.edu;bcgsc.ca 37 10 31810468 31810468 + Silent SNP T T C novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ZEB1 NM_001174096 exon7 c.T2208C p.L736L ACCTCTTGATCTT . 36.0 4.0 45.0 0.0 . 518 ZKSCAN7 55888 ucsc.edu;bcgsc.ca 37 3 44612400 44612400 + Missense_Mutation SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . . NM_018651 exon6 c.A1798G p.I600V GAGCGAATTCATA . 46.0 4.0 44.0 0.0 . . ZNF134 7693 hgsc.bcm.edu;broad.mit.edu 37 19 58132394 58132399 + In_Frame_Del DEL CTTGTT CTTGTT - novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 CTTGTT CTTGTT . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ZNF134 NM_003435 exon3 c.907_912del p.303_304del TCTACACTTGTTC . 52.0 10.0 34.0 0.0 . 226 ZNF185 7739 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 152101462 152101462 + Silent SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ZNF185 NM_001178108 exon14 c.G1068A p.T356T AGCCACGGGCTCC . 89.0 41.0 102.0 1.0 . 133 ZNF234 10780 ucsc.edu;bcgsc.ca 37 19 44661469 44661469 + Missense_Mutation SNP G G A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . . NM_006630 exon6 c.G1300A p.G434S GTATGTGGTAAAG . 46.0 4.0 56.0 0.0 . . ZNF256 10172 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 58453498 58453498 + Silent SNP A A G novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ZNF256 NM_005773 exon3 c.T678C p.R226R CTGAACACGTACA . 115.0 35.0 68.0 0.0 . 92 ZNF333 84449 ucsc.edu;bcgsc.ca 37 19 14817512 14817512 + Silent SNP T T A novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ZNF333 NM_032433 exon7 c.T438A p.A146A GGCCGCTATGCAG . 25.0 4.0 23.0 0.0 . 92 ZNF419 79744 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 58004285 58004285 + Silent SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ZNF419 NM_001098491 exon5 c.C363T p.L121L ACTGCTCAGTTCA . 122.0 41.0 77.0 0.0 . 90 ZNF596 169270 ucsc.edu;bcgsc.ca 37 8 192905 192905 + Missense_Mutation SNP G G T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ZNF596 NM_173539 exon3 c.G31T p.D11Y TTCGAGGATATCA . 32.0 4.0 32.0 0.0 . 90 ZNF804A 91752 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 185800964 185800964 + Missense_Mutation SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . ZNF804A NM_194250 exon4 c.C841T p.P281S CATCCACCAGAGG . 46.0 16.0 24.0 0.0 . 163 ZNF878 729747 ucsc.edu;bcgsc.ca 37 19 12155990 12155990 + Missense_Mutation SNP C C T novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . . NM_001080404 exon4 c.G226A p.E76K GACTTTCTTTACT . 40.0 4.0 48.0 0.0 . . LMNA 4000 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 156106182 156106183 + Missense_Mutation DNP GG GG TA novel TCGA-FV-A23B-01A-11D-A16V-10 TCGA-FV-A23B-11A-11D-A16V-10 GG GG . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 63adc09c-e1b1-40dd-9c35-2f8276b656fc 6c3072b0-3eb6-4a43-8a18-74e5a5869d4c . . . . . p.D446N GGAGGTGGATGAG . 68.0 35.0 53.0 0.0 . .