Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COSMIC_Codon COSMIC_Gene TranscriptID Exon ChromChange AAChange Genome_Plus_Minus_10_Bp Drug_Target TTotCov TVarCov NTotCov NVarCov dbSNPPopFreq COSMIC_Gene_Freq AIM1 202 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 106978191 106978191 + Splice_Site SNP G G T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . AIM1 NM_001624 exon6 c.3494+1G>T . GGGCACGTAAGTA . 114.0 26.0 142.0 1.0 . 139 ALDH1L2 160428 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 12 105464456 105464456 + Missense_Mutation SNP A A G novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . ALDH1L2 NM_001034173 exon3 c.T320C p.F107S GTGCAGAAAGGGA . 335.0 62.0 307.0 0.0 . 91 ALMS1 7840 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 73800105 73800105 + Missense_Mutation SNP C C T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . ALMS1 NM_015120 exon16 c.C11098T p.H3700Y TCTCATCATCGAG . 153.0 18.0 138.0 0.0 . 142 ALMS1 7840 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 2 73677972 73677972 + Nonsense_Mutation SNP C C T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . ALMS1 NM_015120 exon8 c.C4315T p.Q1439X TTCTACCAACAGG . 246.0 23.0 304.0 0.0 . 142 ANKRD18B 441459 hgsc.bcm.edu;bcgsc.ca;mdanderson.org 37 9 33567266 33567266 + Missense_Mutation SNP G G T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . . NM_001244752 exon14 c.G2719T p.A907S GCCTTTGCAGTAG . 436.0 59.0 372.0 0.0 . . ANO5 203859 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 11 22297639 22297639 + Splice_Site DEL G G - novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . ANO5 NM_001142649 exon21 c.2412-1G>- . TTTTCAGGTACAG . 287.0 31.0 200.0 0.0 . 515 ATXN7L1 222255 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 105254791 105254791 + Missense_Mutation SNP T T C novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . ATXN7L1 NM_020725 exon10 c.A1990G p.T664A GGGATGTCTGCAA . 466.0 82.0 402.0 1.0 . 90 AXIN2 8313 broad.mit.edu;bcgsc.ca 37 17 63532595 63532595 + Silent SNP G G A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . AXIN2 NM_004655 exon8 c.C1984T p.L662L CCCACAGATGGTG . 123.0 18.0 57.0 0.0 . 658 BCDIN3D 144233 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 50236856 50236856 + Silent SNP C C A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . BCDIN3D NM_181708 exon1 c.G15T p.T5T CAGTTCCGTGGGC . 88.0 16.0 55.0 0.0 . 69 C1orf173 127254 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 1 75037157 75037157 + Nonsense_Mutation SNP C C A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . C1orf173 NM_001002912 exon14 c.G4237T p.E1413X CTTCCTCCCCACT . 299.0 41.0 358.0 0.0 . 94 C9orf171 389799 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 135413022 135413022 + Missense_Mutation SNP C C T rs182716958 alternate_allele TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . C9orf171 NM_207417 exon5 c.C667T p.R223W CAGCACCGGTACC . 138.0 29.0 124.0 0.0 C|0.865;A|0.135 157 CACNA1E 777 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 181688911 181688911 + Missense_Mutation SNP G G A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . CACNA1E NM_001205293 exon13 c.G1663A p.V555M TTTGAAGTGGTCT . 445.0 44.0 360.0 1.0 . 95 CCDC155 147872 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 49920647 49920647 + Silent SNP C C A rs182291239 alternate_allele TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . CCDC155 NM_144688 exon20 c.C1569A p.I523I ACTGATCCCAGCT . 137.0 30.0 105.0 0.0 C|0.999;T|0.000 69 CDC42BPB 9578 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 103430853 103430853 + Missense_Mutation SNP G G T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . CDC42BPB NM_006035 exon19 c.C2712A p.N904K GGTGAGGTTGGCG . 60.0 13.0 58.0 0.0 . 581 CEACAM4 1089 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 42132051 42132051 + Missense_Mutation SNP G G T rs199959927 alternate_allele TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . CEACAM4 NM_001817 exon2 c.C348A p.D116E TCCTGCGTCCTCC . 590.0 108.0 540.0 0.0 G|0.999;A|0.001 90 CHM 1121 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 85218969 85218969 + Missense_Mutation SNP C C G novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . CHM NM_000390 exon5 c.G403C p.D135H CAGAATCTGCAGC . 320.0 63.0 254.0 1.0 . 131 COL22A1 169044 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 139838990 139838990 + Missense_Mutation SNP C C A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . COL22A1 NM_152888 exon6 c.G880T p.A294S CAAAGGCGTACTC . 138.0 35.0 121.0 0.0 . 103 COMMD6 170622 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 13 76111799 76111799 + Splice_Site SNP C C A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . COMMD6 NM_203497 exon3 c.54+1G>T . CACCCACCTGGTT . 78.0 13.0 63.0 0.0 . 90 CSMD3 114788 broad.mit.edu;bcgsc.ca 37 8 113402913 113402913 + Missense_Mutation SNP G G A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . CSMD3 NM_198123 exon36 c.C5914T p.P1972S CCTCTGGCACTGT . 123.0 6.0 98.0 0.0 . 1132 CUL7 9820 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 6 43012996 43012996 + Missense_Mutation SNP C C T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . CUL7 NM_001168370 exon15 c.G3259A p.D1087N TGCGGTCCTCTGC . 125.0 9.0 112.0 0.0 . 229 CYFIP2 26999 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 156768087 156768087 + Silent SNP G G T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . CYFIP2 NM_001037332 exon23 c.G2595T p.R865R TGTGCGGACTGCC . 251.0 42.0 245.0 0.0 . 22 DGKG 1608 broad.mit.edu;ucsc.edu;bcgsc.ca 37 3 185986694 185986694 + Missense_Mutation SNP C C G rs199552752 alternate_allele TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . DGKG NM_001346 exon12 c.G1012C p.A338P CCCATGCGTGCTG . 63.0 6.0 54.0 0.0 . 714 DNAH10 196385 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 124387605 124387605 + Missense_Mutation SNP G G A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . DNAH10 NM_207437 exon56 c.G9406A p.E3136K ATCCTGGAGGCCG . 96.0 19.0 112.0 0.0 . 95 DPEP2 64174 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 68027109 68027109 + Missense_Mutation SNP G G T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . DPEP2 NM_022355 exon2 c.C7A p.P3T CGGAGGGCTGCAT . 68.0 17.0 47.0 0.0 . 91 EBF2 64641 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 8 25898461 25898461 + Missense_Mutation SNP T T G novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . EBF2 NM_022659 exon3 c.A346C p.S116R CGTTGCTGTAGAG . 647.0 62.0 562.0 0.0 . 26 EPG5 57724 broad.mit.edu;bcgsc.ca;mdanderson.org 37 18 43460188 43460188 + Missense_Mutation SNP C C A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . EPG5 NM_020964 exon32 c.G5519T p.S1840I GCGGAGCCTGCCA . 63.0 12.0 53.0 0.0 . 580 ESPN 83715 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 6520166 6520166 + Missense_Mutation SNP G G T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . ESPN NM_031475 exon13 c.G2525T p.R842L GGCAGCGACAGGT . 203.0 38.0 164.0 0.0 . 514 EXOC4 60412 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 133314872 133314872 + Missense_Mutation SNP G G T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . EXOC4 NM_021807 exon10 c.G1492T p.V498F ATTACCGTCATAT . 140.0 21.0 184.0 0.0 . 159 GFM2 84340 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 74047313 74047313 + Missense_Mutation SNP C C T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . GFM2 NM_032380 exon6 c.G310A p.D104N CATCATCAACATC . 188.0 24.0 168.0 0.0 . 90 GNRH2 2797 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 3025397 3025397 + Missense_Mutation SNP C C T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . GNRH2 NM_001501 exon3 c.C227T p.P76L TGGCTCCCCTGGA . 110.0 12.0 96.0 0.0 . 90 GOSR2 9570 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 45017921 45017921 + Missense_Mutation SNP G G T rs147434599 byfrequency;alternate_allele TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . GOSR2 NM_054022 exon7 c.G584T p.G195V CCCCAGGCACCCA . 56.0 17.0 31.0 0.0 G|0.999;C|0.001 92 GRAP2 9402 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 40343142 40343142 + Missense_Mutation SNP C C A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . GRAP2 NM_004810 exon2 c.C32A p.A11D TCACTGCTTCAGG . 263.0 68.0 338.0 0.0 . 227 GRHL2 79977 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 102611376 102611376 + Silent SNP G G A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . GRHL2 NM_024915 exon8 c.G1095A p.A365A AGAGGCGAAGGTG . 298.0 60.0 304.0 0.0 . 93 HDAC9 9734 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 18633535 18633535 + Missense_Mutation SNP G G A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . HDAC9 NM_001204144 exon8 c.G664A p.A222T AGGGCTGCCCACC . 146.0 23.0 216.0 0.0 . 227 IVNS1ABP 10625 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 185274712 185274712 + Missense_Mutation SNP C C A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . IVNS1ABP NM_006469 exon8 c.G721T p.A241S CCTCAGCCTGTCC . 297.0 106.0 259.0 0.0 . 94 KIAA1328 57536 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 34647292 34647292 + Missense_Mutation SNP G G C novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . KIAA1328 NM_020776 exon7 c.G1016C p.R339P ATTGTCGGCTTTC . 435.0 68.0 538.0 0.0 . 90 KIAA1551 55196 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 12 32137832 32137832 + Nonsense_Mutation SNP G G T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . . NM_018169 exon4 c.G3943T p.E1315X TCTTATGAACAAG . 153.0 20.0 118.0 0.0 . . KIF21A 55605 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 39726715 39726715 + Silent SNP C C G novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . KIF21A NM_001173464 exon19 c.G2682C p.T894T TGCCGGCGTTGGT . 187.0 37.0 177.0 0.0 . 97 KRT33B 3884 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 39522752 39522752 + Missense_Mutation SNP C C A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . KRT33B NM_002279 exon3 c.G558T p.E186D CAGCAGCTCCTCC . 95.0 19.0 128.0 0.0 . 90 KRT5 3852 broad.mit.edu;ucsc.edu;mdanderson.org 37 12 52910560 52910560 + Nonsense_Mutation SNP C C A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . KRT5 NM_000424 exon7 c.G1300T p.E434X CCAGCTCGGCCAG . 202.0 28.0 206.0 1.0 . 90 KRTAP19-4 337971 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 31869199 31869199 + Missense_Mutation SNP C C A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . KRTAP19-4 NM_181610 exon1 c.G230T p.R77I AATGATCTTCTTA . 239.0 32.0 250.0 0.0 . 70 L3MBTL4 91133 ucsc.edu;bcgsc.ca 37 18 6138293 6138293 + Missense_Mutation SNP T T C novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . L3MBTL4 NM_173464 exon14 c.A1099G p.T367A CATTCGTTCCTTC . 42.0 4.0 44.0 0.0 . 93 LCOR 84458 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 10 98715171 98715171 + Frame_Shift_Del DEL G G - novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . LCOR NM_001170766 exon8 c.794delG p.W265fs TTTCTTGGGAGTC . 138.0 23.0 157.0 0.0 . 189 LDLR 3949 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 11213382 11213382 + Missense_Mutation SNP G G T rs146675823 alternate_allele TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . LDLR NM_001195800 exon3 c.G233T p.R78L GGGGCCGTGTCAA . 230.0 44.0 230.0 0.0 G|1.000;A|0.000 94 LONP2 83752 ucsc.edu;bcgsc.ca 37 16 48286049 48286049 + Missense_Mutation SNP A A G novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . LONP2 NM_031490 exon2 c.A241G p.T81A ATTGGCACAGCTG . 58.0 6.0 62.0 0.0 . 90 LRRC4C 57689 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 40137653 40137653 + Silent SNP G G T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . LRRC4C NM_001258419 exon7 c.C190A p.R64R TTTTCCGAACACA . 155.0 20.0 157.0 0.0 . 521 LTA4H 4048 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 96406996 96406996 + Missense_Mutation SNP T T G novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . LTA4H NM_000895 exon14 c.A1349C p.Y450S GGAGAGTAGAGCC . 171.0 24.0 166.0 1.0 . 91 MAGEE2 139599 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 X 75004287 75004287 + Nonsense_Mutation SNP C C T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . MAGEE2 NM_138703 exon1 c.G600A p.W200X CAAGTCCCAAATG . 110.0 26.0 69.0 0.0 . 132 MAST2 23139 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 46485312 46485312 + Silent SNP G G A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . MAST2 NM_015112 exon11 c.G1233A p.Q411Q GATGCAGCTGGTG . 157.0 26.0 188.0 0.0 . 581 MC4R 4160 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 58039123 58039123 + Missense_Mutation SNP C C A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . MC4R NM_005912 exon1 c.G460T p.A154S GGAGAGCATAGAA . 99.0 14.0 121.0 0.0 . 522 MECOM 2122 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 168819859 168819859 + Silent SNP G G A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . MECOM NM_004991 exon11 c.C2760T p.R920R GGTATAGCGCTCC . 153.0 24.0 172.0 0.0 . 853 MLL2 8085 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 49443882 49443882 + Silent SNP C C A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . MLL2 NM_003482 exon11 c.G3489T p.V1163V AGGGGTCACAGGG . 157.0 23.0 124.0 0.0 . 612 MLST8 64223 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 2256103 2256103 + Missense_Mutation SNP G G C novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . MLST8 NM_001199174 exon2 c.G17C p.G6A CCCCAGGCACGGT . 114.0 38.0 103.0 1.0 . 392 MSL1 339287 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 17 38289863 38289868 + In_Frame_Del DEL CAGGAA CAGGAA - novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 CAGGAA CAGGAA . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . MSL1 NM_001012241 exon8 c.844_849del p.282_283del GGAATTCAGGAAT . 104.0 17.0 129.0 0.0 . 68 MTMR4 9110 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 56582859 56582859 + Silent SNP C C A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . MTMR4 NM_004687 exon11 c.G1077T p.V359V GCTACACACAGCC . 152.0 26.0 121.0 0.0 . 91 MTMR7 9108 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 17198946 17198946 + Missense_Mutation SNP C C T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . MTMR7 NM_004686 exon6 c.G658A p.E220K TCTGCTCGTCCTC . 88.0 23.0 102.0 1.0 . 91 MUTYH 4595 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 45795060 45795060 + Missense_Mutation SNP C C A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . MUTYH NM_001128425 exon16 c.G1568T p.R523L CCCATGCGGGGCT . 326.0 50.0 244.0 1.0 . 1083 MYH7 4625 hgsc.bcm.edu;broad.mit.edu 37 14 23889251 23889251 + Frame_Shift_Del DEL C C - novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . MYH7 NM_000257 exon27 c.3529delG p.D1177fs CCAGGTCCCGCCG . 330.0 34.0 189.0 0.0 . 94 MYO3B 140469 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 2 171260816 171260816 + Silent SNP G G T rs201316029 alternate_allele TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . MYO3B NM_001083615 exon20 c.G2337T p.P779P CCGCCCGCTCTTG . 210.0 41.0 225.0 0.0 G|0.999;A|0.001 530 MYO7B 4648 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 2 128335798 128335798 + Nonsense_Mutation SNP G G T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . MYO7B NM_001080527 exon9 c.G940T p.E314X GACTCCGAGAGCT . 171.0 24.0 140.0 0.0 . 47 NCOA3 8202 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 46279951 46279951 + Missense_Mutation SNP G G T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . NCOA3 NM_181659 exon20 c.G3877T p.D1293Y AGCATGGATGGGC . 133.0 22.0 139.0 0.0 . 229 NEXN 91624 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 78407772 78407772 + Missense_Mutation SNP T T A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . NEXN NM_144573 exon12 c.T1538A p.M513K TGAATATGAAAGC . 299.0 43.0 339.0 0.0 . 92 NXPE4 54827 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 114453455 114453455 + Missense_Mutation SNP G G A rs111330181 TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . . NM_001077639 exon3 c.C385T p.R129C TCCTGCGTCCCAA . 443.0 59.0 456.0 0.0 A|1.000;|0.000 . OR2T12 127064 broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 248458244 248458244 + Missense_Mutation SNP G G T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . OR2T12 NM_001004692 exon1 c.C637A p.L213M AGGACAGGATGAG . 1594.0 243.0 1449.0 2.0 . 71 OR2Z1 284383 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 8842140 8842140 + Silent SNP C C A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . OR2Z1 NM_001004699 exon1 c.C750A p.L250L GGGGCTCTTTTAT . 231.0 33.0 172.0 1.0 . 69 OR4A15 81328 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 55135486 55135486 + Silent SNP T T C novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . OR4A15 NM_001005275 exon1 c.T127C p.L43L ATCCTCTTAGGGC . 220.0 35.0 262.0 0.0 . 70 OR52R1 119695 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 4825512 4825512 + Silent SNP C C A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . OR52R1 NM_001005177 exon1 c.G99T p.P33P ACAGAACGGAAAG . 132.0 20.0 148.0 1.0 . 69 OR5T2 219464 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 55999981 55999981 + Silent SNP A A C novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . OR5T2 NM_001004746 exon1 c.T681G p.S227S AGAATAAGAAATA . 658.0 95.0 655.0 1.0 . 70 OR7D4 125958 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 9324917 9324917 + Silent SNP C C T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . OR7D4 NM_001005191 exon1 c.G597A p.L199L CACATACAAGACA . 186.0 33.0 146.0 0.0 . 71 OTOP1 133060 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 4199717 4199717 + Missense_Mutation SNP A A G novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . OTOP1 NM_177998 exon5 c.T844C p.S282P TTGTGGAGGCCAG . 285.0 52.0 339.0 2.0 . 92 OVCH1 341350 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 12 29617463 29617463 + Missense_Mutation SNP G G T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . OVCH1 NM_183378 exon18 c.C2102A p.T701N CATCCGGTCACAG . 142.0 20.0 148.0 0.0 . 210 PCDH11X 27328 broad.mit.edu;ucsc.edu;bcgsc.ca 37 X 91090988 91090988 + Missense_Mutation SNP C C T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . PCDH11X NM_001168363 exon1 c.C485T p.A162V TCCCAGCGGCTGT . 244.0 101.0 178.0 1.0 . 193 PCDHA11 56138 broad.mit.edu;bcgsc.ca 37 5 140250040 140250040 + Missense_Mutation SNP C C A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . PCDHA11 NM_018902 exon1 c.C1352A p.A451E ACAATGCGCCTGC . 336.0 35.0 311.0 1.0 . 67 PCDHA11 56138 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 140250371 140250371 + Silent SNP G G A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . PCDHA11 NM_018902 exon1 c.G1683A p.A561A CAACGCGCCGGCA . 104.0 16.0 105.0 0.0 . 67 PCLO 27445 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 7 82435139 82435139 + Missense_Mutation SNP G G A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . PCLO NM_033026 exon21 c.C14798T p.P4933L TTGGGAGGCTTTG . 187.0 17.0 216.0 0.0 . 29 PFKP 5214 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 3146084 3146084 + Missense_Mutation SNP G G A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . PFKP NM_002627 exon5 c.G568A p.A190T GACTCCGCCCTGC . 72.0 17.0 60.0 0.0 . 253 PHF12 57649 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 27251239 27251239 + Missense_Mutation SNP C C A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . PHF12 NM_020889 exon4 c.G403T p.D135Y CAGTGTCACTGCT . 212.0 48.0 172.0 0.0 . 91 PITPNM2 57605 ucsc.edu;bcgsc.ca 37 12 123472131 123472131 + Missense_Mutation SNP C C A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . PITPNM2 NM_020845 exon21 c.G3190T p.G1064W CACGCCCACTGTT . 76.0 9.0 72.0 0.0 . 228 PLA2G3 50487 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 31534717 31534717 + Missense_Mutation SNP G G T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . PLA2G3 NM_015715 exon2 c.C583A p.Q195K TGTACTGCAAGGG . 544.0 95.0 593.0 1.0 . 226 PLCD3 113026 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 43195840 43195840 + Missense_Mutation SNP C C A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . PLCD3 . . . . CAGTGTCATCAGC . 166.0 65.0 88.0 1.0 . 703 PLCG2 5336 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 81927388 81927388 + Missense_Mutation SNP G G T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . PLCG2 NM_002661 exon12 c.G1061T p.R354L GCTGTCGCTGCAT . 74.0 13.0 90.0 0.0 . 892 PPARGC1B 133522 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 149213132 149213132 + Missense_Mutation SNP C C T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . PPARGC1B NM_133263 exon5 c.C1496T p.P499L TGGTCCCCTCGGA . 102.0 21.0 89.0 0.0 . 186 PPBP 5473 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 74853684 74853684 + Missense_Mutation SNP G G T rs201755460 alternate_allele TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . PPBP NM_002704 exon1 c.C137A p.A46E CCTTTCGCCAAGT . 229.0 51.0 291.0 0.0 . 93 PPP2R2B 5521 broad.mit.edu;bcgsc.ca 37 5 146435232 146435232 + Missense_Mutation SNP T T C novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . PPP2R2B NM_181674 exon1 c.A70G p.R24G ACCTTCTGTGTGG . 158.0 15.0 141.0 0.0 . 659 PRKCQ 5588 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 6470193 6470193 + Silent SNP G G T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . PRKCQ NM_006257 exon18 c.C2097A p.P699P CATCCCGGGGTTC . 205.0 39.0 187.0 1.0 . 1380 PVRL2 5819 broad.mit.edu;ucsc.edu;mdanderson.org 37 19 45391367 45391367 + Nonsense_Mutation SNP G G T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . PVRL2 NM_001042724 exon9 c.G1348T p.E450X CTCCAGGAAATGC . 249.0 53.0 193.0 1.0 . 90 RALGAPB 57148 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 37154091 37154091 + Missense_Mutation SNP G G C novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . RALGAPB NM_020336 exon12 c.G1832C p.R611P AATTGCGAAGATC . 607.0 105.0 711.0 0.0 . 92 RB1 5925 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 13 49030478 49030479 + Frame_Shift_Ins INS - - A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . RB1 NM_000321 exon19 c.1953_1954insA p.Y651fs GTTTTATAAAAAA . 103.0 19.0 126.0 0.0 . 3784 RGSL1 353299 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 1 182458241 182458241 + Nonsense_Mutation SNP G G T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . RGSL1 NM_001137669 exon8 c.G1621T p.E541X ATGAAGGAAATGG . 270.0 40.0 241.0 0.0 . 226 RSPH6A 81492 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 19 46318184 46318184 + Missense_Mutation SNP C C A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . RSPH6A NM_030785 exon1 c.G251T p.G84V TCCATGCCACCCA . 112.0 11.0 77.0 0.0 . 91 RYR1 6261 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 38974064 38974064 + Silent SNP G G A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . RYR1 NM_001042723 exon33 c.G4842A p.V1614V GCAGGTGGAGACG . 76.0 13.0 91.0 0.0 . 100 S100A7A 338324 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 153390678 153390678 + Missense_Mutation SNP C C A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . S100A7A NM_176823 exon2 c.C120A p.F40L GAACTTCCCCAAT . 446.0 163.0 312.0 1.0 . 91 SACS 26278 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 23904756 23904756 + Missense_Mutation SNP C C A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . SACS NM_014363 exon10 c.G13259T p.C4420F GGGGGGCATTTTT . 151.0 35.0 129.0 0.0 . 298 SERPINB4 6318 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 18 61308143 61308143 + Missense_Mutation SNP T T C novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . SERPINB4 NM_002974 exon5 c.A434G p.K145R ATCTTCTTTCGAC . 463.0 77.0 512.0 0.0 . 228 SLC18A2 6571 ucsc.edu;bcgsc.ca 37 10 119015145 119015145 + Missense_Mutation SNP A A G novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . SLC18A2 NM_003054 exon9 c.A872G p.D291G TGAAGGACCCGTA . 40.0 4.0 49.0 0.0 . 90 SLC24A4 123041 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 92949118 92949118 + Missense_Mutation SNP G G T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . SLC24A4 NM_153646 exon13 c.G1350T p.E450D CTGGGAGAAGTTC . 135.0 20.0 146.0 0.0 . 93 SLC2A14 144195 broad.mit.edu;ucsc.edu;mdanderson.org 37 12 7981450 7981450 + Nonsense_Mutation SNP C C A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . SLC2A14 NM_153449 exon7 c.G595T p.E199X TGAGTTCCAGACC . 210.0 29.0 216.0 1.0 . 91 SLC37A4 2542 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 118896705 118896705 + Missense_Mutation SNP C C A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . SLC37A4 NM_001467 exon8 c.G956T p.R319L GTTACCCGGAAGA . 134.0 14.0 140.0 0.0 . 67 SLC6A11 6538 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 10967702 10967702 + Missense_Mutation SNP C C A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . SLC6A11 NM_014229 exon9 c.C1133A p.A378D GCCTGGCCTTTAT . 242.0 47.0 205.0 1.0 . 132 SLITRK6 84189 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 86370026 86370026 + Missense_Mutation SNP G G T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . SLITRK6 NM_032229 exon2 c.C618A p.H206Q GCCAATGTGTTCG . 131.0 24.0 120.0 0.0 . 137 SMG9 56006 hgsc.bcm.edu;bcgsc.ca 37 19 44238560 44238560 + Silent SNP G G T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . SMG9 NM_019108 exon10 c.C1083A p.T361T GTACTCGGTGCCT . 101.0 5.0 76.0 0.0 . 91 SORCS3 22986 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 106959776 106959776 + Missense_Mutation SNP C C T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . SORCS3 NM_014978 exon15 c.C2029T p.L677F TTCAGCCTCCGCT . 150.0 30.0 151.0 1.0 . 99 SPIN4 139886 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 62570624 62570624 + Silent SNP G G A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . SPIN4 NM_001012968 exon1 c.C75T p.H25H CTTCCTGTGGGTG . 84.0 44.0 89.0 0.0 . 109 STAB1 23166 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 52546358 52546358 + Missense_Mutation SNP C C T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . STAB1 NM_015136 exon27 c.C2885T p.A962V CCCAGGCCACCTG . 68.0 9.0 75.0 0.0 . 139 STK3 6788 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 99560362 99560362 + Missense_Mutation SNP T T A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . STK3 NM_001256312 exon11 c.A1060T p.M354L TCACCATGGTGTG . 152.0 34.0 188.0 0.0 . 978 SYT16 83851 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 62551067 62551067 + Missense_Mutation SNP A A T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . SYT16 NM_031914 exon5 c.A1588T p.S530C AAAGGCAGCCATT . 113.0 22.0 80.0 0.0 . 23 TLR8 51311 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 12939183 12939183 + Missense_Mutation SNP T T C novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . TLR8 NM_138636 exon2 c.T2024C p.M675T ATAATATGTTAAA . 134.0 47.0 87.0 0.0 . 629 TMPRSS3 64699 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 43802158 43802158 + Missense_Mutation SNP A A G novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . TMPRSS3 NM_032405 exon9 c.T968C p.L323P CCACATAGAGACC . 150.0 14.0 160.0 1.0 . 155 TNK2 10188 ucsc.edu;bcgsc.ca 37 3 195605439 195605439 + Missense_Mutation SNP C C A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . TNK2 NM_001010938 exon8 c.G1228T p.G410W GCTCCCCCTCCTT . 43.0 4.0 32.0 0.0 . 957 TP53 7157 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 7577534 7577534 + Missense_Mutation SNP C C A rs28934571 bycluster TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d TP53,mouth,carcinoma,0 TP53 NM_000546 exon7 c.G747T p.R249S GATGGGCCTCCGG . 172.0 34.0 202.0 2.0 C|1.000;|0.000 70225 TRAPPC3 27095 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 36614938 36614938 + Missense_Mutation SNP C C T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . TRAPPC3 NM_001270894 exon1 c.G42A p.M14I AGTTACCATTTTC . 172.0 24.0 117.0 1.0 . 90 TRIM49 57093 hgsc.bcm.edu;broad.mit.edu 37 11 89537604 89537604 + Frame_Shift_Del DEL C C - novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . TRIM49 NM_020358 exon3 c.34delG p.E12fs TGAGTTCCCCCTG . 394.0 36.0 438.0 0.0 . 84 TRO 7216 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 X 54955568 54955598 + Frame_Shift_Del DEL GTTTCAGCAGTGAAGCCAGCATTAGCTTTGG GTTTCAGCAGTGAAGCCAGCATTAGCTTTGG - novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 GTTTCAGCAGTGAAGCCAGCATTAGCTTTGG GTTTCAGCAGTGAAGCCAGCATTAGCTTTGG . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . TRO NM_001039705 exon12 c.2411_2441del p.804_814del GCACTAGTTTCAG . 145.0 0.0 136.0 0.0 . 131 TSC2 7249 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 16 2098719 2098719 + Nonsense_Mutation SNP C C T rs137854105 TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . TSC2 NM_001114382 exon2 c.C103T p.Q35X GGTAAACAGACGG . 264.0 59.0 227.0 0.0 . 1908 TTBK1 84630 broad.mit.edu;ucsc.edu;bcgsc.ca 37 6 43230655 43230655 + Missense_Mutation SNP T T A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . TTBK1 NM_032538 exon13 c.T1553A p.V518E CCTCTGTGGAGCA . 156.0 26.0 117.0 1.0 . 353 TTN 7273 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 179484372 179484372 + Missense_Mutation SNP C C A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . TTN NM_001267550 exon250 c.G46672T p.A15558S CTCTGGCTTCTTT . 314.0 48.0 312.0 1.0 . 636 USP19 10869 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 49151699 49151699 + Missense_Mutation SNP G G C novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . USP19 NM_001199161 exon16 c.C2311G p.P771A GAAACGGGTCAAA . 200.0 39.0 132.0 0.0 . 663 VN1R2 317701 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 53761860 53761860 + Missense_Mutation SNP T T G novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . VN1R2 NM_173856 exon1 c.T232G p.S78A CTTGTCTCTGCAC . 135.0 26.0 90.0 0.0 . 90 ZBED5 58486 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 11 10875696 10875696 + Missense_Mutation SNP C C G novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . . NM_021211 exon3 c.G797C p.R266T TTCAGTCTACAAA . 215.0 12.0 216.0 0.0 . . ZGPAT 84619 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 62340061 62340061 + Silent SNP G G T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . ZGPAT NM_032527 exon2 c.G129T p.L43L GGACCTGAAGGAG . 59.0 11.0 63.0 0.0 . 90 ZNF154 7710 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 58216279 58216279 + Silent SNP A A T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . ZNF154 NM_001085384 exon2 c.T102A p.A34A TCTTTGAGCCTCA . 266.0 30.0 314.0 0.0 . 90 ZNF202 7753 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 11 123598880 123598880 + Missense_Mutation SNP A A G novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . ZNF202 NM_003455 exon7 c.T793C p.Y265H AGACATATTCTCC . 238.0 13.0 227.0 0.0 . 91 ZNF202 7753 hgsc.bcm.edu;broad.mit.edu;mdanderson.org 37 11 123600353 123600353 + Nonsense_Mutation SNP C C A novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . ZNF202 NM_003455 exon5 c.G583T p.E195X CCTCTTCCTGGTG . 123.0 10.0 140.0 0.0 . 91 ZNF324B 388569 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 19 58967236 58967236 + Missense_Mutation SNP G G T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . ZNF324B NM_207395 exon4 c.G925T p.G309C CACAGCGGCGAGA . 158.0 23.0 185.0 0.0 . 91 ZNF407 55628 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 18 72775861 72775861 + Missense_Mutation SNP C C T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . ZNF407 NM_017757 exon8 c.C6184T p.P2062S GTCCATCCCTCAG . 94.0 9.0 74.0 0.0 . 92 ZNF536 9745 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 19 30935048 30935048 + Silent SNP C C T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . ZNF536 NM_014717 exon2 c.C579T p.R193R TGTGCGCGAGGAG . 50.0 12.0 32.0 0.0 . 144 ZP3 7784 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 76062261 76062261 + Missense_Mutation SNP G G T novel TCGA-DD-A114-01A-11D-A12Z-10 TCGA-DD-A114-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 90fc6786-22dd-4122-9622-6cd05c0f9f96 9d9f0180-5872-4882-ab29-986b29f4af7d . ZP3 NM_001110354 exon3 c.G449T p.S150I TGAGCAGCCAGGC . 103.0 19.0 95.0 0.0 . 90