Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	ref_context	gc_content	t_alt_count	t_ref_count
LRIT1	26103	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	10	86001154	86001154	+	Silent	SNP	C	C	T			TCGA-HT-A5RB-01A-11D-A289-08	TCGA-HT-A5RB-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	badfd81e-213a-4a00-b2a6-d3fc0ec351cf	abe3f148-9638-4601-9848-f309142fed65	GGGGGGGCCACGCAAGGGCCA	0.672	16	24
NAT10	55226	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	34139764	34139764	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-A5RB-01A-11D-A289-08	TCGA-HT-A5RB-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	badfd81e-213a-4a00-b2a6-d3fc0ec351cf	abe3f148-9638-4601-9848-f309142fed65	GAAGTGTCTCGTCATTGATGA	0.532	46	61
OR5M8	219484	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	56258374	56258374	+	Missense_Mutation	SNP	T	T	C	rs142719978		TCGA-HT-A5RB-01A-11D-A289-08	TCGA-HT-A5RB-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	badfd81e-213a-4a00-b2a6-d3fc0ec351cf	abe3f148-9638-4601-9848-f309142fed65	CCACATGGTCTCCATCAGGCC	0.512	48	82
OR11H6	122748	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	14	20692401	20692401	+	Missense_Mutation	SNP	T	T	C			TCGA-HT-A5RB-01A-11D-A289-08	TCGA-HT-A5RB-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	badfd81e-213a-4a00-b2a6-d3fc0ec351cf	abe3f148-9638-4601-9848-f309142fed65	CCAGTCCCTATTGTTCTTATC	0.502	21	19
TMC3	342125	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	15	81641895	81641895	+	Missense_Mutation	SNP	A	A	G			TCGA-HT-A5RB-01A-11D-A289-08	TCGA-HT-A5RB-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	badfd81e-213a-4a00-b2a6-d3fc0ec351cf	abe3f148-9638-4601-9848-f309142fed65	GACGAGGGAGACCACCACACT	0.552	8	14
SLX4	84464	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	3640627	3640627	+	Silent	SNP	G	G	A			TCGA-HT-A5RB-01A-11D-A289-08	TCGA-HT-A5RB-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	badfd81e-213a-4a00-b2a6-d3fc0ec351cf	abe3f148-9638-4601-9848-f309142fed65	TTTGTTCCTCGGGCTCACTTG	0.577	15	105
TP53	7157	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	7578235	7578235	+	Missense_Mutation	SNP	T	T	G			TCGA-HT-A5RB-01A-11D-A289-08	TCGA-HT-A5RB-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	badfd81e-213a-4a00-b2a6-d3fc0ec351cf	abe3f148-9638-4601-9848-f309142fed65	GTCATCCAAATACTCCACACG	0.542	60	10
DSG2	1829	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	18	29121270	29121270	+	Missense_Mutation	SNP	A	A	G			TCGA-HT-A5RB-01A-11D-A289-08	TCGA-HT-A5RB-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	badfd81e-213a-4a00-b2a6-d3fc0ec351cf	abe3f148-9638-4601-9848-f309142fed65	GCACCACCTGAAGACAAGGTC	0.473	9	42
MUC16	94025	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	9088746	9088746	+	Silent	SNP	T	T	C			TCGA-HT-A5RB-01A-11D-A289-08	TCGA-HT-A5RB-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	badfd81e-213a-4a00-b2a6-d3fc0ec351cf	abe3f148-9638-4601-9848-f309142fed65	TGGTCTCTGTTGTGAGGATGG	0.468	90	139
MAP3K10	4294	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	40719044	40719044	+	Missense_Mutation	SNP	T	T	C			TCGA-HT-A5RB-01A-11D-A289-08	TCGA-HT-A5RB-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	badfd81e-213a-4a00-b2a6-d3fc0ec351cf	abe3f148-9638-4601-9848-f309142fed65	CCTGGGCAAGTCCCCCAAACA	0.612	9	11
ZNF616	90317	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	52618795	52618795	+	Missense_Mutation	SNP	C	C	G			TCGA-HT-A5RB-01A-11D-A289-08	TCGA-HT-A5RB-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	badfd81e-213a-4a00-b2a6-d3fc0ec351cf	abe3f148-9638-4601-9848-f309142fed65	AGTATGAATTCTCCGATGCCT	0.443	38	71
FAM3B	54097	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	21	42710402	42710402	+	Silent	SNP	C	C	T			TCGA-HT-A5RB-01A-11D-A289-08	TCGA-HT-A5RB-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	badfd81e-213a-4a00-b2a6-d3fc0ec351cf	abe3f148-9638-4601-9848-f309142fed65	GAAGCAAGTACGCCAAAATCT	0.502	38	62
IDH1	3417	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	209113112	209113112	+	Missense_Mutation	SNP	C	C	T	rs121913500		TCGA-HT-A5RB-01A-11D-A289-08	TCGA-HT-A5RB-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	badfd81e-213a-4a00-b2a6-d3fc0ec351cf	abe3f148-9638-4601-9848-f309142fed65	ATAAGCATGACGACCTATGAT	0.393	24	64
LIMK1	3984	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	73520287	73520287	+	Missense_Mutation	SNP	A	A	G			TCGA-HT-A5RB-01A-11D-A289-08	TCGA-HT-A5RB-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	badfd81e-213a-4a00-b2a6-d3fc0ec351cf	abe3f148-9638-4601-9848-f309142fed65	TGGCACGCCCATCCGAAATGT	0.607	42	53
TNKS	8658	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	9588459	9588459	+	Silent	SNP	C	C	T			TCGA-HT-A5RB-01A-11D-A289-08	TCGA-HT-A5RB-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	badfd81e-213a-4a00-b2a6-d3fc0ec351cf	abe3f148-9638-4601-9848-f309142fed65	ATTCCACGCCCTTACACTTCG	0.498	33	55
PDGFRL	5157	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	17447012	17447012	+	Missense_Mutation	SNP	A	A	G			TCGA-HT-A5RB-01A-11D-A289-08	TCGA-HT-A5RB-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	badfd81e-213a-4a00-b2a6-d3fc0ec351cf	abe3f148-9638-4601-9848-f309142fed65	CAAGCGTCCAAAAGAACCAGG	0.428	101	151
ACER2	340485	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	19435024	19435024	+	Missense_Mutation	SNP	A	A	G			TCGA-HT-A5RB-01A-11D-A289-08	TCGA-HT-A5RB-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	badfd81e-213a-4a00-b2a6-d3fc0ec351cf	abe3f148-9638-4601-9848-f309142fed65	CATCAACAACATCTCTCTGAT	0.537	16	116
CSF2RA	1438	broad.mit.edu;ucsc.edu	37	X	1413343	1413343	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-A5RB-01A-11D-A289-08	TCGA-HT-A5RB-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	badfd81e-213a-4a00-b2a6-d3fc0ec351cf	abe3f148-9638-4601-9848-f309142fed65	CCAGCTGGACGTCCACAGAAA	0.632	43	73
ATRX	546	broad.mit.edu;hgsc.bcm.edu	37	X	76814303	76814306	+	Frame_Shift_Del	DEL	ATAA	ATAA	-			TCGA-HT-A5RB-01A-11D-A289-08	TCGA-HT-A5RB-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	badfd81e-213a-4a00-b2a6-d3fc0ec351cf	abe3f148-9638-4601-9848-f309142fed65	AGTAGAAATGATAAATAATCGTCC	0.289	29	3