Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ref_context gc_content t_alt_count t_ref_count PTEN 5728 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 10 89720813 89720813 + Missense_Mutation SNP A A G TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 TACTTTAACAAAAAATGATCT 0.323 25 35 OR51L1 119682 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 11 5020872 5020872 + Silent SNP T T C TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 TTCTTTCTTATGTTCTGATTC 0.403 16 44 OR5M3 219482 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 11 56237331 56237331 + Missense_Mutation SNP A A T TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 AATAAGTAAGAGATGATAATT 0.428 33 94 MS4A7 58475 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 11 60152680 60152680 + Silent SNP T T C TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 GGTACCCATTTTTAGGAGCTC 0.483 45 125 PGR 5241 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 11 100998773 100998773 + Silent SNP C C A TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 AGGGTGAACTCCGCGGCGGGG 0.687 16 42 DDI1 414301 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 11 103907873 103907873 + Missense_Mutation SNP G G A rs138983347 TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 TCCAGCTCCCGTCCACAGCAC 0.672 41 110 ATP8A2 51761 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 13 26273415 26273415 + Silent SNP G G A TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 TGAAGTACGCGCTCTCCTTCG 0.552 8 48 INF2 64423 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 14 105174336 105174336 + Missense_Mutation SNP C C T TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 CAACGTGGCACGTGGTGAGGG 0.647 11 27 VPS13C 54832 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 15 62238562 62238562 + Missense_Mutation SNP C C T TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 TTAAGTCTGGCAAACACATCA 0.318 5 24 RGS11 8786 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 16 321439 321439 + Silent SNP C C T TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 TCCTGCCCAGCGCTTTCCTGA 0.647 10 45 KNOP1 400506 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 16 19726120 19726120 + Nonsense_Mutation SNP C C A TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 TCTACATGCTCCTCGCAAAGG 0.542 14 52 POLR2C 5432 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 16 57504027 57504027 + Silent SNP C C T TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 CAGTGTACCCCAAGCCCGAGG 0.537 13 18 NFATC1 4772 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 18 77170697 77170697 + Missense_Mutation SNP T T A TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 GATGTGGAGGTGGAAGACGTC 0.627 10 23 FBN3 84467 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 19 8191627 8191627 + Missense_Mutation SNP G G A rs113517176 TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 GGGTCCAGCCGGCTGCCAGGG 0.657 15 39 CACNA1A 773 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 19 13565980 13565980 + Missense_Mutation SNP C C T TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 AGTGCGAGGACGATGCAATTC 0.453 44 116 SHKBP1 92799 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 19 41096328 41096328 + Splice_Site SNP G G A TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 CCAGGCCCCTGGTACTCCCTG 0.682 9 25 SLC8A2 6543 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 19 47935602 47935602 + Silent SNP G G A TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 GCACACAGGCGAAGAGCACCT 0.652 26 79 KLK8 11202 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 19 51499377 51499377 + Missense_Mutation SNP C C T rs56296296 byFrequency TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 TTGGTATAGACGCCAGGTTTG 0.542 42 142 PEG3 5178 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 19 57327274 57327274 + Missense_Mutation SNP T T C TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 CCATTGTGACTTCTTGGAGGT 0.433 25 50 HSPG2 3339 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 1 22201401 22201401 + Missense_Mutation SNP G G A TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 GACGGCCCACGGTACCCGGGT 0.697 5 8 GPATCH3 63906 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 1 27224101 27224101 + Silent SNP C C T TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 CTCTGGGCATCAGCACTGGTG 0.602 18 52 BPIFB3 359710 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 20 31656779 31656779 + Splice_Site SNP C C T TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 AGCTGAACTCCGTGAGTGGTC 0.587 14 32 WISP2 8839 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 20 43355905 43355905 + Missense_Mutation SNP G G C TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 TCCAGGCCCTGCCCACCCTCC 0.677 12 38 KCNB1 3745 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 20 47989555 47989555 + Missense_Mutation SNP C C T TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 CCATGGGCTCCTCCCCCTGGC 0.537 11 34 ZNF280B 140883 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 22 22843526 22843526 + Silent SNP C C T TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 ACCATGAACCCGGGGTGACTC 0.408 14 78 SLC5A1 6523 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 22 32487648 32487648 + Silent SNP C C T TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 TCATGAGCTCCCTGACCTCCA 0.527 24 78 CCDC134 79879 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 22 42221755 42221755 + Silent SNP C C A TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 AAGAGAAACGCCGAAAGAAAG 0.532 18 51 VGLL4 9686 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 3 11600065 11600065 + Missense_Mutation SNP C C T TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 CTGTGGCTGACCATGTGGGCA 0.622 16 56 PRSS50 29122 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 3 46755847 46755847 + Silent SNP G G A TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 GGCCGATGTCGTTGGCCTGGC 0.607 9 11 NIT2 56954 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 3 100057936 100057936 + Missense_Mutation SNP C C T TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 CTCAGCTTTCCGCTTGGCCCT 0.473 33 102 JAKMIP1 152789 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 4 6043922 6043922 + Silent SNP G G A TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 TCTGGGTCAGGGCGGCCTCGG 0.547 10 50 ZCCHC4 29063 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 4 25351255 25351255 + Nonsense_Mutation SNP C C T TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 GAAAGAAGGTCAAAGCCAAGG 0.378 28 70 AFM 173 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 4 74352724 74352724 + Missense_Mutation SNP G G A TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 ATTTGTCTTCGCCCCTACACT 0.398 17 62 PCDHGA5 56110 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 5 140744613 140744613 + Missense_Mutation SNP C C T TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 AACGACAATGCGCCCCTGTTC 0.587 25 80 FAT2 2196 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 5 150921911 150921911 + Missense_Mutation SNP G G A TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 CTTTAGAGTCGCCACCAGTTC 0.507 38 122 DPPA5 340168 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 6 74063752 74063752 + Missense_Mutation SNP G G A TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 AGATCCGTCCGGGCCTGTTGG 0.612 27 63 MACC1 346389 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 7 20197969 20197969 + Missense_Mutation SNP C C A TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 ATGTGAGTAACCCAGGACATC 0.338 21 40 EGFR 1956 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 7 55221723 55221723 + Missense_Mutation SNP A A G TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 AAATTCCGAGACGAAGCCACG 0.587 42 69 WBSCR28 135886 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 7 73280003 73280003 + Silent SNP C C T TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 CTCCTGGCACCTGGCCTATCT 0.612 58 254 ABCB4 5244 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 7 87104712 87104712 + Missense_Mutation SNP C C G TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 CTGCTGATGCCCAGTTCAAAG 0.547 15 65 HEPACAM2 253012 hgsc.bcm.edu;broad.mit.edu 37 7 92838183 92838183 + Missense_Mutation SNP G G T TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 AAGTCCATAAGGTCCATCTGC 0.358 16 72 UFSP1 402682 hgsc.bcm.edu;broad.mit.edu 37 7 100486857 100486857 + Silent SNP C C T TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 CGATCCAGTCCCGGGAGCCCC 0.751 11 41 MUC17 140453 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 7 100683975 100683975 + Missense_Mutation SNP C C T TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 GCTGAAGGTACCAGCATGCCA 0.493 119 460 CFTR 1080 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 7 117267621 117267621 + Missense_Mutation SNP G G A TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 CATGCCAACAGAAGGTAAACC 0.368 9 50 FUT10 84750 hgsc.bcm.edu;ucsc.edu 37 8 33318925 33318925 + Missense_Mutation SNP C C T TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 GTGGCTGTGACGCACAGGCAA 0.552 25 59 DMRT2 10655 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 9 1056823 1056823 + Silent SNP C C T TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 AGATCCAGACCACGAGAAGTG 0.577 49 51 GATA1 2623 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 X 48650342 48650342 + Silent SNP C C T TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 CGGGGCTCTACCCTGCCTCAA 0.597 12 53 TCEAL3 85012 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 X 102864217 102864217 + Silent SNP G G A TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 CCGAAGGTGAGGGCAAGCCAC 0.622 44 166 FLNA 2316 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 X 153588484 153588484 + Missense_Mutation SNP C C T TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 GTGTAGGCCCCGGGGCAGAGG 0.637 15 80 TSGA10IP 254187 broad.mit.edu;ucsc.edu 37 11 65714852 65714852 + RNA SNP G G A TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 CATCCCTACTGGCAAAGGGGA 0.637 5 18 CHMP4C 92421 broad.mit.edu;ucsc.edu 37 8 82667660 82667660 + Missense_Mutation SNP G G A TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 ACAGGATATCGCCCAAGAAAT 0.378 19 75 APOBR 55911 broad.mit.edu;ucsc.edu 37 16 28508034 28508034 + Missense_Mutation SNP G G A TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 CACACACAGCGTCACCAAAGG 0.642 5 7 SLC27A4 10999 broad.mit.edu;ucsc.edu 37 9 131118036 131118036 + Missense_Mutation SNP C C T TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 GTATGCGCGCCCCATCTTCCT 0.637 14 72 CLEC14A 161198 broad.mit.edu;ucsc.edu 37 14 38724436 38724436 + Silent SNP G G A TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 CTCCCAAGTCGTCTAGGCAGT 0.637 61 108 MYOCD 93649 broad.mit.edu;ucsc.edu 37 17 12655924 12655924 + Missense_Mutation SNP G G C TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 TCTTCTACCAGTGCCCTGTCC 0.587 34 99 HUWE1 10075 broad.mit.edu;ucsc.edu 37 X 53654434 53654434 + Silent SNP C C T rs145017919 byFrequency TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 TGATCACAAACGGACATTCTT 0.318 22 84 SLC7A3 84889 broad.mit.edu;ucsc.edu 37 X 70148064 70148064 + Missense_Mutation SNP C C T TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 AGAATTCCCTCGAAGCCGAAA 0.498 4 26 NRROS 375387 broad.mit.edu;ucsc.edu 37 3 196387770 196387770 + Missense_Mutation SNP C C T TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 GGCGTCCCCCCTGGCCTCTTC 0.637 35 109 PNMA3 29944 broad.mit.edu;ucsc.edu 37 X 152226634 152226634 + Missense_Mutation SNP C C T rs148950007 byFrequency TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 CTCAAGAAAACGGAAACGCCA 0.577 36 108 MFGE8 4240 broad.mit.edu;ucsc.edu 37 15 89453060 89453060 + Silent SNP C C T rs138080885 byFrequency TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 CCTTAAGGCACGTGCAGGTGT 0.557 21 84 MRPL41 64975 broad.mit.edu;hgsc.bcm.edu 37 9 140446796 140446796 + Frame_Shift_Del DEL C C - rs11555676 TCGA-DU-7012-01A-11D-2024-08 TCGA-DU-7012-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx fe3d6872-aff9-4ae8-af7b-46472f427f79 89a62f09-5c76-4466-8c9c-1df134c441f6 CCCCTGACGGCCGCGCAGCTC 0.627 10 44