Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	NormalRefReads_WU	NormalVarReads_WU	NormalVAF_WU	TumorRefReads_WU	TumorVarReads_WU	TumorVAF_WU	RNARefReads_WU	RNAVarReads_WU	RNAVAF_WU
SMC1A	0	genome.wustl.edu	36	X	53443351	53443351	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2824-03B-01W-0728-08	TCGA-AB-2824-11B-01W-0728-08	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	cc17877a-9444-4476-9fc7-3e53e702e7a5	33596319-5024-4e92-bf38-ac65a78fdb4c	X	53443351	53443351	C	T	SNP	SMC1A	NM_006306.2	human	genbank	54_36p	-1	reviewed	missense	c.2447	p.R816H	1.000	HMMPfam_SMC_N,superfamily_SSF52540	HMMPfam_SMC_N,HMMPfam_SMC_hinge,superfamily_SMC_hinge,superfamily_SSF52540	-	no_errors	72	1	1.37	187	45	19.23	43	22	33.85
DNMT3A	0	genome.wustl.edu	36	2	25316790	25316790	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2824-03B-01W-0728-08	TCGA-AB-2824-11B-01W-0728-08	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	cc17877a-9444-4476-9fc7-3e53e702e7a5	33596319-5024-4e92-bf38-ac65a78fdb4c	2	25316790	25316790	C	T	SNP	DNMT3A	NM_022552.3	human	genbank	54_36p	-1	reviewed	missense	c.2207	p.R736H	1.000	HMMPfam_DNA_methylase,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	HMMPfam_PWWP,HMMSmart_SM00293,HMMPfam_DNA_methylase,superfamily_FYVE/PHD zinc finger,PatternScan_C5_MTASE_1,superfamily_S-adenosyl-L-methionine-dependent methyltransferases,superfamily_Tudor/PWWP/MBT	-	no_errors	37	4	9.52	36	36	50.00	6	9	60.00
MDH1B	0	genome.wustl.edu	36	2	207328068	207328068	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2824-03B-01W-0728-08	TCGA-AB-2824-11B-01W-0728-08	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	cc17877a-9444-4476-9fc7-3e53e702e7a5	33596319-5024-4e92-bf38-ac65a78fdb4c	2	207328068	207328068	G	A	SNP	MDH1B	NM_001039845.1	human	genbank	54_36p	-1	validated	missense	c.820	p.R274C	0.067	superfamily_NAD(P)-binding Rossmann-fold domains	superfamily_LDH C-terminal domain-like,superfamily_NAD(P)-binding Rossmann-fold domains	-	no_errors	201	29	12.61	154	127	44.41	NA	NA	NA
RAB23	0	genome.wustl.edu	36	6	57166661	57166661	+	Missense_Mutation	SNP	T	T	C			TCGA-AB-2824-03B-01W-0728-08	TCGA-AB-2824-11B-01W-0728-08	T	T	T	C	T	T	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	cc17877a-9444-4476-9fc7-3e53e702e7a5	33596319-5024-4e92-bf38-ac65a78fdb4c	6	57166661	57166661	T	C	SNP	RAB23	NM_016277.3	human	genbank	54_36p	-1	reviewed	missense	c.512	p.Q171R	1.000	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors	83	1	1.19	194	40	17.09	5	0	0.00
NPM1	0	genome.wustl.edu	36	5	170770152	170770153	+	Frame_Shift_Ins	INS	-	-	TCTG			TCGA-AB-2824-03B-01W-0728-08	TCGA-AB-2824-11B-01W-0728-08	-	-	-	TCTG	-	-	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	cc17877a-9444-4476-9fc7-3e53e702e7a5	33596319-5024-4e92-bf38-ac65a78fdb4c	5	170770152	170770153	-	TCTG	INS	NPM1	NM_002520.1	human	genbank	54_36p	+1	validated	frame_shift_ins	c.863_864	p.W288fs	1.000:1.000	NULL	HMMPfam_Nucleoplasmin,superfamily_Nucleoplasmin-like core domain	-	no_errors	NA	NA	NA	NA	NA	NA	NA	NA	NA