Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	TVarRat	NVarRat	dbSNP_Strength	dbSNP_AF	dbSNP_PopFreq	Confidence	Algorithm
CC2D1B	200014	hgsc.bcm.edu	hg19	1	52820569	52820569	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	CC2D1B,NS,carcinoma,0,1	CC2D1B	NM_032449	exon22	c.G2300T	p.R767L	AAGCCCCGGTGGT	.	74.0	3.0	124.0	0.0	.	73	.	.	.	none	.	.	PASS	Atlas-SNP
EVI5	7813	hgsc.bcm.edu	hg19	1	93160869	93160869	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	EVI5	NM_005665	exon7	c.G1039C	p.E347Q	TTACCTCAGACAT	.	66.0	7.0	135.0	0.0	.	94	.	.	.	none	.	.	PASS	Atlas-SNP
OR6Y1	391112	hgsc.bcm.edu	hg19	1	158517503	158517503	+	Silent	SNP	A	A	T	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	OR6Y1	NM_001005189	exon1	c.T393A	p.I131I	ATTACAAATGGCT	.	104.0	8.0	100.0	0.0	.	73	.	.	.	none	.	.	PASS	Atlas-SNP
NUAK2	81788	hgsc.bcm.edu	hg19	1	205274389	205274389	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	NUAK2	NM_030952	exon6	c.A761G	p.D254G	TTATGGTCATGCC	.	69.0	17.0	87.0	0.0	.	107	.	.	.	none	.	.	PASS	Atlas-SNP
SDE2	163859	hgsc.bcm.edu	hg19	1	226180666	226180666	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	.	NM_152608	exon3	c.T276G	p.I92M	CTTCTCAATCTGA	.	69.0	25.0	89.0	0.0	.	.	.	.	.	none	.	.	PASS	Atlas-SNP
FH	2271	hgsc.bcm.edu	hg19	1	241663812	241663812	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	FH	NM_000143	exon9	c.C1315T	p.Q439X	TGGCCTGGATTCC	.	218.0	91.0	195.0	0.0	.	64	.	.	.	none	.	.	PASS	Atlas-SNP
SCN2A	6326	hgsc.bcm.edu	hg19	2	166201262	166201262	+	Silent	SNP	C	C	G	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	SCN2A	NM_001040143	exon15	c.C2760G	p.L920L	TGAACTCCCACGC	.	182.0	26.0	199.0	0.0	.	589	.	.	.	none	.	.	PASS	Atlas-SNP
XIRP2	129446	hgsc.bcm.edu	hg19	2	168105759	168105759	+	Silent	SNP	G	G	A	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	XIRP2	NM_152381	exon9	c.G7857A	p.R2619R	TGCTCGGATACTA	.	147.0	41.0	134.0	0.0	.	914	.	.	.	none	.	.	PASS	Atlas-SNP
SESTD1	91404	hgsc.bcm.edu	hg19	2	179986590	179986590	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	SESTD1	NM_178123	exon13	c.C1349T	p.S450F	GCCCAGGATGCCT	.	84.0	26.0	76.0	0.0	.	66	.	.	.	none	.	.	PASS	Atlas-SNP
ABCB6	10058	hgsc.bcm.edu	hg19	2	220074990	220074990	+	Silent	SNP	G	G	A	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	ABCB6	NM_005689	exon18	c.C2382T	p.I794I	GACGAGGATCTGG	.	126.0	8.0	129.0	0.0	.	76	.	.	.	none	.	.	PASS	Atlas-SNP
CNOT10	25904	hgsc.bcm.edu	hg19	3	32766999	32766999	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	CNOT10	NM_001256742	exon9	c.G1100A	p.S367N	CCATGAGCAAGCA	.	133.0	8.0	177.0	0.0	.	57	.	.	.	none	.	.	PASS	Atlas-SNP
TAS2R1	50834	hgsc.bcm.edu	hg19	5	9629374	9629374	+	Silent	SNP	G	G	A	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	TAS2R1	NM_019599	exon1	c.C771T	p.F257F	AAAGATGAACCTT	.	85.0	7.0	103.0	0.0	.	84	.	.	.	none	.	.	PASS	Atlas-SNP
SHROOM1	134549	hgsc.bcm.edu	hg19	5	132161119	132161119	+	Silent	SNP	C	C	T	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	SHROOM1	NM_133456	exon1	c.G714A	p.P238P	CCGCGCCGGCCCA	.	11.0	8.0	25.0	0.0	.	35	.	.	.	none	.	.	PASS	Atlas-SNP
MTHFD1L	25902	hgsc.bcm.edu	hg19	6	151358132	151358132	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	MTHFD1L	NM_001242767	exon26	c.A2729G	p.K910R	TGGCAAAGACCCA	.	87.0	6.0	116.0	0.0	.	75	.	.	.	none	.	.	PASS	Atlas-SNP
NOBOX	135935	hgsc.bcm.edu	hg19	7	144098145	144098145	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	NOBOX_ENST00000467773,NS,carcinoma,0,2	NOBOX	NM_001080413	exon4	c.C838A	p.R280S	CTGAGCGGTATAG	.	27.0	2.0	59.0	1.0	.	130	.	.	.	none	.	.	PASS	Atlas-SNP
KIAA1984	84960	hgsc.bcm.edu	hg19	9	139694856	139694856	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	KIAA1984	NM_001039374	exon5	c.G454A	p.E152K	CAGCTGGAGAACA	.	17.0	6.0	20.0	0.0	.	39	.	.	.	none	.	.	PASS	Atlas-SNP
GLB1L2	89944	hgsc.bcm.edu	hg19	11	134241359	134241359	+	Silent	SNP	A	A	G	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	GLB1L2	NM_138342	exon14	c.A1401G	p.T467T	CAAGACAACGAAG	.	210.0	79.0	216.0	0.0	.	79	.	.	.	none	.	.	PASS	Atlas-SNP
ULK1	8408	hgsc.bcm.edu	hg19	12	132395297	132395297	+	Silent	SNP	C	C	T	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	ULK1	NM_003565	exon12	c.C900T	p.S300S	GGGGTCCGGCAGC	.	81.0	31.0	95.0	0.0	.	92	.	.	.	none	.	.	PASS	Atlas-SNP
SNURF	8926	hgsc.bcm.edu	hg19	15	25207297	25207297	+	Silent	SNP	C	C	T	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	SNURF	NM_005678	exon2	c.C51T	p.H17H	ACAGCACGTACCA	.	74.0	5.0	129.0	0.0	.	17	.	.	.	none	.	.	PASS	Atlas-SNP
UACA	55075	hgsc.bcm.edu	hg19	15	70987423	70987423	+	Silent	SNP	C	C	T	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	UACA	NM_018003	exon3	c.G234A	p.K78K	ATTCCCCTTTGAG	.	27.0	18.0	44.0	0.0	.	235	.	.	.	none	.	.	PASS	Atlas-SNP
KIAA0753	9851	hgsc.bcm.edu	hg19	17	6531560	6531560	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	KIAA0753	NM_014804	exon3	c.C595T	p.Q199X	GAGGCTGAAGTCC	.	157.0	9.0	179.0	0.0	.	63	.	.	.	none	.	.	PASS	Atlas-SNP
TRPV2	51393	hgsc.bcm.edu	hg19	17	16340169	16340169	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	TRPV2	NM_016113	exon15	c.A2261G	p.N754S	AGGAAAACTATGT	.	145.0	58.0	156.0	0.0	.	74	.	.	.	none	.	.	PASS	Atlas-SNP
SYT4	6860	hgsc.bcm.edu	hg19	18	40853736	40853736	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	SYT4	NM_020783	exon2	c.G658C	p.D220H	TCTCATCAAAAGC	.	68.0	30.0	147.0	0.0	.	162	.	.	.	none	.	.	PASS	Atlas-SNP
SERPINB10	5273	hgsc.bcm.edu	hg19	18	61585305	61585305	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	SERPINB10	NM_005024	exon3	c.T341A	p.I114K	ATGCGATATATGG	.	44.0	6.0	83.0	0.0	.	53	.	.	.	none	.	.	PASS	Atlas-SNP
KXD1	79036	hgsc.bcm.edu	hg19	19	18679377	18679377	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	C19orf50,caecum,carcinoma,0,1	.	NM_001171948	exon6	c.A467T	p.Q156L	ATGTCCAGCCTGG	.	141.0	9.0	151.0	0.0	.	.	.	.	.	none	.	.	PASS	Atlas-SNP
LSS	4047	hgsc.bcm.edu	hg19	21	47615617	47615617	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	LSS,trunk,malignant_melanoma,0,1	LSS	NM_001001438	exon19	c.C1790T	p.A597V	ATACAGGCGAAGG	.	67.0	51.0	118.0	0.0	.	50	.	.	.	none	.	.	PASS	Atlas-SNP
APOL3	80833	hgsc.bcm.edu	hg19	22	36556768	36556768	+	Missense_Mutation	SNP	G	G	T	rs11089781	bycluster;byfrequency;by2hit2allele;byhapmap;by1000genomes;alternate_allele	TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	APOL3	NM_145640	exon1	c.C172A	p.Q58K	TGAGCTGTGTGGA	.	75.0	11.0	144.0	0.0	.	60	.	.	.	alt	G|0.932;A|0.068	.	PASS	Atlas-SNP
ATP2B3	492	hgsc.bcm.edu	hg19	X	152823737	152823737	+	Silent	SNP	C	C	T	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	ATP2B3	NM_001001344	exon15	c.C2601T	p.A867A	CGTGGCCTTCACA	.	133.0	8.0	208.0	0.0	.	552	.	.	.	none	.	.	PASS	Atlas-SNP
B2M	567	hgsc.bcm.edu	hg19	15	45003781	45003782	+	Frame_Shift_Del	DEL	CT	CT	-	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	CT	CT	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	B2M	NM_004048	exon1	c.36_37del	p.12_13del	.	.	58.0	10.0	104.0	0.0	.	99	.	0.172414	0	none	.	.	PASS	Atlas-INDEL
TAF1B	9014	hgsc.bcm.edu	hg19	2	10059757	10059763	+	Frame_Shift_Del	DEL	GCACACT	GCACACT	-	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	GCACACT	GCACACT	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	TAF1B	NM_005680	exon14	c.1372_1378del	p.458_460del	.	.	101.0	17.0	123.0	0.0	.	62	.	0.168317	0	none	.	.	PASS	Atlas-INDEL
TCFL5	10732	hgsc.bcm.edu	hg19	20	61490803	61490806	+	Frame_Shift_Del	DEL	AGAA	AGAA	-	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	AGAA	AGAA	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	TCFL5	NM_006602	exon3	c.905_908del	p.302_303del	.	.	210.0	74.0	228.0	0.0	.	43	.	0.352381	0	none	.	.	PASS	Atlas-INDEL
NF2	4771	hgsc.bcm.edu	hg19	22	30061052	30061052	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	NF2	NM_181832	exon9	c.883delC	p.L295X	.	.	24.0	18.0	28.0	0.0	.	1312	.	0.75	0	none	.	.	PASS	Atlas-INDEL
STARD3	10948	hgsc.bcm.edu	hg19	17	37809843	37809854	+	In_Frame_Del	DEL	CCTCCCTGGGCT	CCTCCCTGGGCT	-	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	CCTCCCTGGGCT	CCTCCCTGGGCT	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	STARD3	NM_006804	exon2	c.58_69del	p.20_23del	.	.	60.0	20.0	76.0	0.0	.	33	.	0.333333	0	none	.	.	PASS	Atlas-INDEL
CACNG2	10369	hgsc.bcm.edu	hg19	22	37098492	37098492	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	CACNG2	NM_006078	exon1	c.131delG	p.S44fs	.	.	174.0	120.0	266.0	0.0	.	43	.	0.689655	0	none	.	.	PASS	Atlas-INDEL
PUS3	83480	hgsc.bcm.edu	hg19	11	125766029	125766029	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-GL-7966-01A-11D-2201-08	TCGA-GL-7966-10A-01D-2201-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	458fa5d9-d07d-4869-8e72-52b7318d7810	b720a727-863a-4225-99b2-bb5cd03e11bd	.	PUS3	NM_031307	exon2	c.152delC	p.T51fs	.	.	244.0	18.0	255.0	0.0	.	33	.	0.0737705	0	none	.	.	PASS	Atlas-INDEL