Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	TVarRat	NVarRat	dbSNP_Strength	dbSNP_AF	dbSNP_PopFreq	Confidence	Algorithm
ZC3H12A	80149	hgsc.bcm.edu	hg19	1	37948521	37948521	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G7-A8LC-01A-11D-A35Z-10	TCGA-G7-A8LC-10A-01D-A35Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	de876c49-d506-4de1-aad0-0136b35dd6f6	394bdf7b-2234-462d-839c-0a6177ffd570	.	ZC3H12A	NM_025079	exon6	c.A1109T	p.E370V	TAACAGAGAGTGA	.	104.0	71.0	233.0	0.0	.	58	.	.	.	none	.	.	PASS	Atlas-SNP
SWT1	54823	hgsc.bcm.edu	hg19	1	185159736	185159736	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-G7-A8LC-01A-11D-A35Z-10	TCGA-G7-A8LC-10A-01D-A35Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	de876c49-d506-4de1-aad0-0136b35dd6f6	394bdf7b-2234-462d-839c-0a6177ffd570	.	SWT1	NM_017673	exon10	c.C1485G	p.H495Q	CCAGCACCAGGAA	.	83.0	59.0	109.0	0.0	.	88	.	.	.	none	.	.	PASS	Atlas-SNP
POLR1A	25885	hgsc.bcm.edu	hg19	2	86327152	86327152	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G7-A8LC-01A-11D-A35Z-10	TCGA-G7-A8LC-10A-01D-A35Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	de876c49-d506-4de1-aad0-0136b35dd6f6	394bdf7b-2234-462d-839c-0a6177ffd570	.	POLR1A	NM_015425	exon2	c.G221A	p.C74Y	CCAGAACAGTTGC	.	129.0	6.0	111.0	0.0	.	137	.	.	.	none	.	.	PASS	Atlas-SNP
SLC6A3	6531	hgsc.bcm.edu	hg19	5	1420693	1420693	+	Silent	SNP	G	G	A	novel		TCGA-G7-A8LC-01A-11D-A35Z-10	TCGA-G7-A8LC-10A-01D-A35Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	de876c49-d506-4de1-aad0-0136b35dd6f6	394bdf7b-2234-462d-839c-0a6177ffd570	.	SLC6A3	NM_001044	exon6	c.C918T	p.C306C	CGCCTCGCAGAGC	.	58.0	27.0	70.0	0.0	.	102	.	.	.	none	.	.	PASS	Atlas-SNP
SGK223	0	hgsc.bcm.edu	hg19	8	8235196	8235196	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-A8LC-01A-11D-A35Z-10	TCGA-G7-A8LC-10A-01D-A35Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	de876c49-d506-4de1-aad0-0136b35dd6f6	394bdf7b-2234-462d-839c-0a6177ffd570	.	.	NM_001080826	exon2	c.G723T	p.R241S	CGAGCACCTTTGA	.	77.0	8.0	130.0	0.0	.	.	.	.	.	none	.	.	PASS	Atlas-SNP
TRAPPC9	83696	hgsc.bcm.edu	hg19	8	140898201	140898201	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G7-A8LC-01A-11D-A35Z-10	TCGA-G7-A8LC-10A-01D-A35Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	de876c49-d506-4de1-aad0-0136b35dd6f6	394bdf7b-2234-462d-839c-0a6177ffd570	.	TRAPPC9	NM_031466	exon21	c.C3271T	p.R1091C	CACTGCGCTTCAG	.	204.0	153.0	381.0	0.0	.	114	.	.	.	none	.	.	PASS	Atlas-SNP
DDI1	414301	hgsc.bcm.edu	hg19	11	103907571	103907571	+	Silent	SNP	C	C	T	novel		TCGA-G7-A8LC-01A-11D-A35Z-10	TCGA-G7-A8LC-10A-01D-A35Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	de876c49-d506-4de1-aad0-0136b35dd6f6	394bdf7b-2234-462d-839c-0a6177ffd570	DDI1_ENST00000302259,colon,carcinoma,0,3	DDI1	NM_001001711	exon1	c.C21T	p.C7C	GTACTGCGTGCGG	.	113.0	47.0	87.0	0.0	.	222	.	.	.	none	.	.	PASS	Atlas-SNP
SAV1	60485	hgsc.bcm.edu	hg19	14	51131969	51131969	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-A8LC-01A-11D-A35Z-10	TCGA-G7-A8LC-10A-01D-A35Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	de876c49-d506-4de1-aad0-0136b35dd6f6	394bdf7b-2234-462d-839c-0a6177ffd570	.	SAV1	NM_021818	exon2	c.G463T	p.D155Y	TGTAGTCTTCATG	.	303.0	177.0	454.0	1.0	.	18	.	.	.	none	.	.	PASS	Atlas-SNP
YLPM1	56252	hgsc.bcm.edu	hg19	14	75276483	75276483	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G7-A8LC-01A-11D-A35Z-10	TCGA-G7-A8LC-10A-01D-A35Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	de876c49-d506-4de1-aad0-0136b35dd6f6	394bdf7b-2234-462d-839c-0a6177ffd570	.	YLPM1	NM_019589	exon7	c.A4922T	p.D1641V	CTGTTGATTATGG	.	133.0	82.0	208.0	1.0	.	298	.	.	.	none	.	.	PASS	Atlas-SNP
GPRC5C	55890	hgsc.bcm.edu	hg19	17	72443056	72443056	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-A8LC-01A-11D-A35Z-10	TCGA-G7-A8LC-10A-01D-A35Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	de876c49-d506-4de1-aad0-0136b35dd6f6	394bdf7b-2234-462d-839c-0a6177ffd570	.	GPRC5C	NM_022036	exon4	c.C1350A	p.N450K	TGCCAACTCGACC	.	98.0	4.0	117.0	0.0	.	92	.	.	.	none	.	.	PASS	Atlas-SNP
POLRMT	5442	hgsc.bcm.edu	hg19	19	621197	621197	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-G7-A8LC-01A-11D-A35Z-10	TCGA-G7-A8LC-10A-01D-A35Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	de876c49-d506-4de1-aad0-0136b35dd6f6	394bdf7b-2234-462d-839c-0a6177ffd570	.	POLRMT	NM_005035	exon10	c.G2501C	p.G834A	TGCGGGCCGAGCG	.	87.0	5.0	112.0	0.0	.	91	.	.	.	none	.	.	PASS	Atlas-SNP
RBM10	8241	hgsc.bcm.edu	hg19	X	47030582	47030582	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-A8LC-01A-11D-A35Z-10	TCGA-G7-A8LC-10A-01D-A35Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	de876c49-d506-4de1-aad0-0136b35dd6f6	394bdf7b-2234-462d-839c-0a6177ffd570	.	RBM10	NM_001204468	exon4	c.G552T	p.E184D	GGAGGAGGATGAG	.	75.0	4.0	81.0	0.0	.	117	.	.	.	none	.	.	PASS	Atlas-SNP
CYTB	0	hgsc.bcm.edu	hg19	MT	14992	14992	+	Silent	SNP	T	T	C	novel		TCGA-G7-A8LC-01A-11D-A35Z-10	TCGA-G7-A8LC-10A-01D-A35Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	de876c49-d506-4de1-aad0-0136b35dd6f6	394bdf7b-2234-462d-839c-0a6177ffd570	.	.	ENST00000361789	exon1	c.T246C	p.L82L	CTACCTTCACGCC	.	30.0	18.0	31.0	0.0	.	.	.	.	.	none	.	.	PASS	Atlas-SNP
SAV1	60485	hgsc.bcm.edu	hg19	14	51131967	51131967	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-G7-A8LC-01A-11D-A35Z-10	TCGA-G7-A8LC-10A-01D-A35Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	de876c49-d506-4de1-aad0-0136b35dd6f6	394bdf7b-2234-462d-839c-0a6177ffd570	.	SAV1	NM_021818	exon2	c.466delT	p.Y156fs	.	.	300.0	176.0	449.0	0.0	.	18	.	0.586667	0	none	.	.	PASS	Atlas-INDEL
SAV1	60485	hgsc.bcm.edu	hg19	14	51131967	51131969	+	In_Frame_Del	DEL	GTC	GTC	-	novel		TCGA-G7-A8LC-01A-11D-A35Z-10	TCGA-G7-A8LC-10A-01D-A35Z-10	GTC	GTC	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	de876c49-d506-4de1-aad0-0136b35dd6f6	394bdf7b-2234-462d-839c-0a6177ffd570	.	SAV1	NM_021818	exon2	c.464_466del	p.155_156del	.	.	303.0	86.0	454.0	0.0	.	18	.	0.284	.	none	.	.	PASS	Pindel