Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	TVarRat	NVarRat	dbSNP_Strength	dbSNP_AF	dbSNP_PopFreq	Confidence	Algorithm
ST6GALNAC5	81849	hgsc.bcm.edu	hg19	1	77528824	77528824	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	ST6GALNAC5	NM_030965	exon5	c.T944G	p.F315C	TTCACTTTTTTCA	.	153.0	49.0	139.0	0.0	.	59	.	.	.	none	.	.	PASS	Atlas-SNP
ST6GALNAC5	81849	hgsc.bcm.edu	hg19	1	77528835	77528835	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	ST6GALNAC5	NM_030965	exon5	c.G955A	p.D319N	CAACCAGACTGGA	.	153.0	46.0	136.0	0.0	.	59	.	.	.	none	.	.	PASS	Atlas-SNP
EGLN1	54583	hgsc.bcm.edu	hg19	1	231556782	231556782	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	EGLN1	NM_022051	exon1	c.G853T	p.G285W	GCTTCCCGTTACA	.	158.0	7.0	181.0	0.0	.	38	.	.	.	none	.	.	PASS	Atlas-SNP
IFT172	26160	hgsc.bcm.edu	hg19	2	27685657	27685657	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	IFT172	NM_015662	exon20	c.G2026T	p.G676X	CTTCTCCGCCCTG	.	118.0	6.0	142.0	0.0	.	119	.	.	.	none	.	.	PASS	Atlas-SNP
CLASP1	23332	hgsc.bcm.edu	hg19	2	122206659	122206659	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	CLASP1	NM_001207051	exon17	c.G1561A	p.A521T	GCTCTGCTTCTCT	.	39.0	12.0	39.0	0.0	.	135	.	.	.	none	.	.	PASS	Atlas-SNP
CCDC174	51244	hgsc.bcm.edu	hg19	3	14695999	14695999	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	.	NM_016474	exon2	c.G109C	p.D37H	CTAAAAGATTCTG	.	38.0	17.0	30.0	0.0	.	.	.	.	.	none	.	.	PASS	Atlas-SNP
DPH3	285381	hgsc.bcm.edu	hg19	3	16302327	16302327	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	DPH3	NM_206831	exon3	c.G193C	p.V65L	CACACACAAACTG	.	68.0	4.0	49.0	0.0	.	7	.	.	.	none	.	.	PASS	Atlas-SNP
SLC22A13	9390	hgsc.bcm.edu	hg19	3	38317479	38317479	+	Missense_Mutation	SNP	C	C	A	rs117371763	bycluster;by1000genomes;alternate_allele	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	SLC22A13	NM_004256	exon7	c.C1129A	p.R377S	CCTGCCCGCTGTT	.	75.0	5.0	55.0	0.0	.	42	.	.	.	alt	C|0.999;T|0.001	.	PASS	Atlas-SNP
PCDH7	5099	hgsc.bcm.edu	hg19	4	30724425	30724425	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	PCDH7_ENST00000361762,NS,carcinoma,0,1	PCDH7	NM_032457	exon1	c.A1381G	p.T461A	ACCTGCACCGTGG	.	62.0	3.0	62.0	1.0	.	215	.	.	.	none	.	.	PASS	Atlas-SNP
DDX60L	91351	hgsc.bcm.edu	hg19	4	169337906	169337906	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	DDX60L	NM_001012967	exon20	c.C2653T	p.L885F	GGAGGAGCTCCCA	.	111.0	33.0	82.0	0.0	.	116	.	.	.	none	.	.	PASS	Atlas-SNP
MAP3K1	4214	hgsc.bcm.edu	hg19	5	56177037	56177037	+	Silent	SNP	T	T	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	MAP3K1	NM_005921	exon13	c.T2307A	p.P769P	ATTTCCTGCTGAA	.	76.0	25.0	48.0	0.0	.	355	.	.	.	none	.	.	PASS	Atlas-SNP
PPP1R9A	55607	hgsc.bcm.edu	hg19	7	94827675	94827675	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	PPP1R9A	NM_017650	exon6	c.G1769T	p.R590L	TTGGGCGGGAAAA	.	152.0	12.0	81.0	0.0	.	264	.	.	.	none	.	.	PASS	Atlas-SNP
DUS4L	11062	hgsc.bcm.edu	hg19	7	107216872	107216872	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	DUS4L	NM_001270419	exon7	c.T541A	p.S181T	GGAGTTTCATGGA	.	114.0	30.0	69.0	0.0	.	27	.	.	.	none	.	.	PASS	Atlas-SNP
TRIM24	8805	hgsc.bcm.edu	hg19	7	138145434	138145434	+	Silent	SNP	G	G	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	TRIM24	NM_003852	exon1	c.G141A	p.A47A	CGAGGCGGCCCGG	.	29.0	12.0	23.0	0.0	.	131	.	.	.	none	.	.	PASS	Atlas-SNP
CLU	1191	hgsc.bcm.edu	hg19	8	27457323	27457323	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	CLU	NM_001831	exon7	c.G1138C	p.D380H	ACTGGTCTTCGCC	.	27.0	10.0	33.0	0.0	.	54	.	.	.	none	.	.	PASS	Atlas-SNP
KAT6A	7994	hgsc.bcm.edu	hg19	8	41791942	41791942	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	.	NM_001099412	exon18	c.A3796C	p.K1266Q	GCTCCTTGGTTTC	.	12.0	4.0	28.0	0.0	.	.	.	.	.	none	.	.	PASS	Atlas-SNP
TRPM3	80036	hgsc.bcm.edu	hg19	9	73213442	73213442	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	TRPM3_ENST00000423814,colon,carcinoma,0,3	TRPM3	NM_001007471	exon20	c.G2905T	p.G969W	CCCTCCCGTCACT	.	169.0	8.0	161.0	1.0	.	700	.	.	.	none	.	.	PASS	Atlas-SNP
PRPF18	8559	hgsc.bcm.edu	hg19	10	13658431	13658431	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	PRPF18	NM_003675	exon9	c.A826G	p.N276D	ATTGGAAATGCGC	.	159.0	46.0	153.0	0.0	.	32	.	.	.	none	.	.	PASS	Atlas-SNP
CYP26A1	1592	hgsc.bcm.edu	hg19	10	94834144	94834144	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	CYP26A1	NM_000783	exon2	c.G269T	p.R90L	CCGTACGGGTGAT	.	219.0	10.0	285.0	0.0	.	59	.	.	.	none	.	.	PASS	Atlas-SNP
ARHGEF17	9828	hgsc.bcm.edu	hg19	11	73066676	73066676	+	Silent	SNP	C	C	G	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	ARHGEF17	NM_014786	exon4	c.C3552G	p.A1184A	GCCTGCCTTTCTC	.	77.0	29.0	58.0	0.0	.	117	.	.	.	none	.	.	PASS	Atlas-SNP
FAT3	120114	hgsc.bcm.edu	hg19	11	92568207	92568207	+	Missense_Mutation	SNP	C	C	G	rs376234071	alternate_allele	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	FAT3_ENST00000409404,caecum,carcinoma,0,6	FAT3	NM_001008781	exon14	c.C10043G	p.A3348G	ACAGTGCGGTTAT	.	41.0	2.0	45.0	0.0	.	1822	.	.	.	alt	.	.	PASS	Atlas-SNP
R3HDM2	22864	hgsc.bcm.edu	hg19	12	57652719	57652719	+	Missense_Mutation	SNP	C	C	A	rs199873508	alternate_allele	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	R3HDM2	NM_014925	exon18	c.G2213T	p.R738L	TGCCCCCGCTGGT	.	193.0	8.0	189.0	0.0	.	125	.	.	.	alt	C|0.999;T|0.001	.	PASS	Atlas-SNP
CENPJ	55835	hgsc.bcm.edu	hg19	13	25466977	25466977	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	CENPJ	NM_018451	exon10	c.G3020T	p.R1007L	TCTTCCCGTAAAT	.	146.0	6.0	146.0	0.0	.	116	.	.	.	none	.	.	PASS	Atlas-SNP
KCNH5	27133	hgsc.bcm.edu	hg19	14	63483656	63483656	+	Silent	SNP	C	C	G	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	KCNH5	NM_172375	exon2	c.G90C	p.L30L	ATTTCCCAGTAAG	.	121.0	5.0	99.0	0.0	.	320	.	.	.	none	.	.	PASS	Atlas-SNP
OR4N4	283694	hgsc.bcm.edu	hg19	15	22383017	22383017	+	Missense_Mutation	SNP	G	G	C	rs150038016	bycluster;byfrequency;by1000genomes;alternate_allele	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	OR4N4,NS,carcinoma,+1,1	OR4N4	NM_001005241	exon1	c.G545C	p.R182P	ATGTCCGACAGGT	.	182.0	8.0	155.0	2.0	.	108	.	.	.	alt	G|0.999;A|0.001	.	PASS	Atlas-SNP
RAB11A	8766	hgsc.bcm.edu	hg19	15	66180113	66180113	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	RAB11A	NM_004663	exon5	c.G586C	p.V196L	AATGTGGTTCCTA	.	130.0	15.0	122.0	0.0	.	14	.	.	.	none	.	.	PASS	Atlas-SNP
RSPRY1	89970	hgsc.bcm.edu	hg19	16	57265132	57265132	+	Missense_Mutation	SNP	A	A	G	rs368309991		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	RSPRY1	NM_133368	exon13	c.A1430G	p.N477S	AGTTCAATTTTGG	.	89.0	27.0	72.0	0.0	.	49	.	.	.	weak	.	.	PASS	Atlas-SNP
FAM57A	79850	hgsc.bcm.edu	hg19	17	643752	643752	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	FAM57A	NM_024792	exon4	c.G416T	p.R139L	GGCTCCGGGGAGA	.	188.0	8.0	141.0	0.0	.	17	.	.	.	none	.	.	PASS	Atlas-SNP
PER1	5187	hgsc.bcm.edu	hg19	17	8045244	8045244	+	Missense_Mutation	SNP	C	C	A	rs373929413	alternate_allele	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	PER1	NM_002616	exon22	c.G3479T	p.R1160L	CGCTCCCGATCCT	.	142.0	6.0	118.0	0.0	.	104	.	.	.	alt	.	.	PASS	Atlas-SNP
NCOR1	9611	hgsc.bcm.edu	hg19	17	15935762	15935762	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	NCOR1,colon,carcinoma,+1,1	NCOR1	NM_006311	exon46	c.C7171G	p.R2391G	GCATCCGCATAGT	.	214.0	41.0	139.0	0.0	.	240	.	.	.	none	.	.	PASS	Atlas-SNP
RND2	8153	hgsc.bcm.edu	hg19	17	41180521	41180521	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	RND2	NM_005440	exon5	c.G508A	p.V170I	CGCAGCGTCAGGG	.	113.0	30.0	112.0	0.0	.	10	.	.	.	none	.	.	PASS	Atlas-SNP
EVPL	2125	hgsc.bcm.edu	hg19	17	74005355	74005355	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	EVPL	NM_001988	exon22	c.A3931C	p.K1311Q	CCGTCTTGGTCTC	.	432.0	94.0	451.0	0.0	.	155	.	.	.	none	.	.	PASS	Atlas-SNP
GPR32	2854	hgsc.bcm.edu	hg19	19	51274070	51274070	+	Silent	SNP	T	T	C	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	GPR32	NM_001506	exon1	c.T213C	p.R71R	CTTCCGTATGGCA	.	74.0	4.0	101.0	0.0	.	68	.	.	.	none	.	.	PASS	Atlas-SNP
NLRP5	126206	hgsc.bcm.edu	hg19	19	56539072	56539072	+	Silent	SNP	C	C	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	NLRP5	NM_153447	exon7	c.C1473T	p.V491V	GAGCGTCGCCCCC	.	56.0	25.0	49.0	0.0	.	217	.	.	.	none	.	.	PASS	Atlas-SNP
TRPC4AP	26133	hgsc.bcm.edu	hg19	20	33591257	33591257	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	TRPC4AP	NM_015638	exon18	c.C2212A	p.Q738K	AGTGCTGCTGCCA	.	126.0	36.0	129.0	0.0	.	64	.	.	.	none	.	.	PASS	Atlas-SNP
KCNQ2	3785	hgsc.bcm.edu	hg19	20	62078166	62078166	+	Silent	SNP	G	G	C	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	KCNQ2	NM_172106	exon2	c.C321G	p.L107L	CAGCACGAGGCAG	.	172.0	51.0	202.0	0.0	.	201	.	.	.	none	.	.	PASS	Atlas-SNP
RPS6KA3	6197	hgsc.bcm.edu	hg19	X	20195138	20195138	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	RPS6KA3	NM_004586	exon11	c.A910G	p.K304E	TTCGCTTGAAAAG	.	68.0	4.0	39.0	0.0	.	110	.	.	.	none	.	.	PASS	Atlas-SNP
DNAJC16	23341	hgsc.bcm.edu	hg19	1	15890499	15890500	+	Frame_Shift_Del	DEL	GA	GA	-	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	GA	GA	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	DNAJC16	NM_015291	exon10	c.1413_1414del	p.471_472del	.	.	306.0	86.0	308.0	0.0	.	59	.	0.281046	0	none	.	.	PASS	Atlas-INDEL
CUBN	8029	hgsc.bcm.edu	hg19	10	16957909	16957910	+	Frame_Shift_Ins	INS	-	-	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	-	-	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	.	CUBN	NM_001081	exon46	c.7121_7122insT	p.Y2374fs	.	.	141.0	51.0	128.0	0.0	.	515	.	0.361702	0	none	.	.	PASS	Atlas-INDEL