Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	TVarRat	NVarRat	dbSNP_Strength	dbSNP_AF	dbSNP_PopFreq	Confidence	Algorithm
ALK	238	hgsc.bcm.edu	hg19	2	29432730	29432730	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B3-3926-01A-01D-1252-08	TCGA-B3-3926-11A-01D-1252-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	814dbddd-9703-4c92-b179-428d00b907bf	cc643b5f-d509-4216-928c-5f6ec8b526e2	.	ALK	NM_004304	exon25	c.G3758C	p.R1253T	CAGTTTCTGGCAG	.	105.0	16.0	98.0	0.0	.	533	.	.	.	none	.	.	PASS	Atlas-SNP
PLXND1	23129	hgsc.bcm.edu	hg19	3	129284750	129284750	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B3-3926-01A-01D-1252-08	TCGA-B3-3926-11A-01D-1252-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	814dbddd-9703-4c92-b179-428d00b907bf	cc643b5f-d509-4216-928c-5f6ec8b526e2	.	PLXND1	NM_015103	exon24	c.G4302T	p.K1434N	AAAGTCCTTCTGC	.	117.0	15.0	69.0	0.0	.	149	.	.	.	none	.	.	PASS	Atlas-SNP
RBAK	57786	hgsc.bcm.edu	hg19	7	5105227	5105227	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B3-3926-01A-01D-1252-08	TCGA-B3-3926-11A-01D-1252-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	814dbddd-9703-4c92-b179-428d00b907bf	cc643b5f-d509-4216-928c-5f6ec8b526e2	RBAK_ENST00000396912,colon,carcinoma,0,1	RBAK	NM_001204456	exon6	c.C2140T	p.L714F	GAAAATCTCTGAA	.	56.0	15.0	89.0	0.0	.	82	.	.	.	none	.	.	PASS	Atlas-SNP
EPDR1	54749	hgsc.bcm.edu	hg19	7	37960767	37960767	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B3-3926-01A-01D-1252-08	TCGA-B3-3926-11A-01D-1252-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	814dbddd-9703-4c92-b179-428d00b907bf	cc643b5f-d509-4216-928c-5f6ec8b526e2	.	EPDR1	NM_001242946	exon1	c.G226T	p.V76L	CAGCGCGTGCGGG	.	135.0	18.0	83.0	0.0	.	48	.	.	.	none	.	.	PASS	Atlas-SNP
MRC2	9902	hgsc.bcm.edu	hg19	17	60766323	60766323	+	Splice_Site	SNP	T	T	C	novel		TCGA-B3-3926-01A-01D-1252-08	TCGA-B3-3926-11A-01D-1252-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	814dbddd-9703-4c92-b179-428d00b907bf	cc643b5f-d509-4216-928c-5f6ec8b526e2	.	MRC2	NM_006039	exon23	c.3334+2T>C	.	CACGGGTATGTGT	.	81.0	14.0	54.0	0.0	.	126	.	.	.	none	.	.	PASS	Atlas-SNP
ACSBG2	81616	hgsc.bcm.edu	hg19	19	6177251	6177251	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B3-3926-01A-01D-1252-08	TCGA-B3-3926-11A-01D-1252-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	814dbddd-9703-4c92-b179-428d00b907bf	cc643b5f-d509-4216-928c-5f6ec8b526e2	ACSBG2,NS,carcinoma,0,4	ACSBG2	NM_030924	exon8	c.T750G	p.I250M	GTGGATTGCAGGA	.	64.0	4.0	86.0	0.0	.	83	.	.	.	none	.	.	PASS	Atlas-SNP
ACSBG2	81616	hgsc.bcm.edu	hg19	19	6177264	6177264	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B3-3926-01A-01D-1252-08	TCGA-B3-3926-11A-01D-1252-08	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	814dbddd-9703-4c92-b179-428d00b907bf	cc643b5f-d509-4216-928c-5f6ec8b526e2	ACSBG2,NS,carcinoma,0,1	ACSBG2	NM_030924	exon8	c.A763G	p.T255A	GCAGTGACAAAGG	.	67.0	3.0	84.0	0.0	.	83	.	.	.	none	.	.	PASS	Atlas-SNP
UBA52	7311	hgsc.bcm.edu	hg19	19	18685757	18685757	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B3-3926-01A-01D-1252-08	TCGA-B3-3926-11A-01D-1252-08	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	814dbddd-9703-4c92-b179-428d00b907bf	cc643b5f-d509-4216-928c-5f6ec8b526e2	.	UBA52	NM_001033930	exon4	c.A268T	p.N90Y	AAATACAACTGCG	.	128.0	13.0	77.0	0.0	.	6	.	.	.	none	.	.	PASS	Atlas-SNP
ZNF99	7652	hgsc.bcm.edu	hg19	19	22940373	22940373	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B3-3926-01A-01D-1252-08	TCGA-B3-3926-11A-01D-1252-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	814dbddd-9703-4c92-b179-428d00b907bf	cc643b5f-d509-4216-928c-5f6ec8b526e2	ZNF99,NS,carcinoma,0,4	ZNF99	NM_001080409	exon4	c.A2338G	p.K780E	TTATCTTATGTTT	.	97.0	4.0	90.0	0.0	.	273	.	.	.	none	.	.	PASS	Atlas-SNP
SAV1	60485	hgsc.bcm.edu	hg19	14	51132122	51132129	+	Frame_Shift_Del	DEL	CTAGACTT	CTAGACTT	-	novel		TCGA-B3-3926-01A-01D-1252-08	TCGA-B3-3926-11A-01D-1252-08	CTAGACTT	CTAGACTT	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	814dbddd-9703-4c92-b179-428d00b907bf	cc643b5f-d509-4216-928c-5f6ec8b526e2	.	SAV1	NM_021818	exon2	c.304_311del	p.102_104del	.	.	50.0	13.0	59.0	0.0	.	18	.	0.26	0	none	.	.	PASS	Atlas-INDEL