Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	TVarRat	NVarRat	dbSNP_Strength	dbSNP_AF	dbSNP_PopFreq	Confidence	Algorithm
MTOR	2475	hgsc.bcm.edu	hg19	1	11184573	11184573	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	MTOR,NS,malignant_melanoma,0,5	MTOR	NM_004958	exon47	c.C6644A	p.S2215Y	CGAAGAGATGTTG	.	71.0	24.0	83.0	0.0	.	327	.	.	.	none	.	.	PASS	Atlas-SNP
MROH7	374977	hgsc.bcm.edu	hg19	1	55118778	55118778	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	.	.	NM_001039464	exon3	c.A179C	p.D60A	TTCCAGATCTTAA	.	148.0	46.0	144.0	0.0	.	.	.	.	.	none	.	.	PASS	Atlas-SNP
TRIM33	51592	hgsc.bcm.edu	hg19	1	114948195	114948195	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	TRIM33,NS,carcinoma,0,1	TRIM33	NM_033020	exon15	c.C2605T	p.H869Y	ACCTGTGCATGAG	.	243.0	65.0	243.0	0.0	.	115	.	.	.	none	.	.	PASS	Atlas-SNP
ADAMTSL4	54507	hgsc.bcm.edu	hg19	1	150525534	150525534	+	Missense_Mutation	SNP	C	C	A	rs146377111	alternate_allele	TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	ADAMTSL4,NS,carcinoma,0,2	ADAMTSL4	NM_019032	exon5	c.C239A	p.P80Q	TCCACCCGAGTCT	.	71.0	3.0	64.0	0.0	.	101	.	.	.	alt	C|1.000;T|0.000	.	PASS	Atlas-SNP
DHRS9	10170	hgsc.bcm.edu	hg19	2	169938176	169938176	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	.	DHRS9	NM_005771	exon5	c.G85A	p.D29N	ATCACTGATAAGT	.	134.0	7.0	121.0	0.0	.	29	.	.	.	none	.	.	PASS	Atlas-SNP
ICA1L	130026	hgsc.bcm.edu	hg19	2	203680713	203680713	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	.	ICA1L	NM_138468	exon8	c.G704T	p.W235L	TTCTTCCAGAATC	.	84.0	4.0	59.0	0.0	.	33	.	.	.	none	.	.	PASS	Atlas-SNP
CLCN2	1181	hgsc.bcm.edu	hg19	3	184075764	184075764	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	.	CLCN2	NM_001171087	exon5	c.C601T	p.P201S	CAAGCGGCATCCC	.	100.0	5.0	119.0	0.0	.	74	.	.	.	none	.	.	PASS	Atlas-SNP
ITGA2	3673	hgsc.bcm.edu	hg19	5	52366069	52366069	+	Silent	SNP	C	C	G	rs142557473	alternate_allele	TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	.	ITGA2	NM_002203	exon17	c.C2214G	p.P738P	TTGCCCCGAGCAC	.	114.0	34.0	57.0	0.0	.	211	.	.	.	alt	C|1.000;T|0.000	.	PASS	Atlas-SNP
PCDHAC1	56135	hgsc.bcm.edu	hg19	5	140307713	140307713	+	Silent	SNP	A	A	G	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	.	PCDHAC1	NM_031882	exon1	c.A1236G	p.Q412Q	ATACCAAGTCCTG	.	99.0	22.0	90.0	0.0	.	141	.	.	.	none	.	.	PASS	Atlas-SNP
PKD1L1	168507	hgsc.bcm.edu	hg19	7	47944905	47944905	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	.	PKD1L1	NM_138295	exon11	c.A1540T	p.N514Y	TTCCATTTGTGTA	.	174.0	37.0	221.0	0.0	.	328	.	.	.	none	.	.	PASS	Atlas-SNP
ZKSCAN5	23660	hgsc.bcm.edu	hg19	7	99129235	99129235	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	.	ZKSCAN5	NM_145102	exon7	c.G1883A	p.S628N	TGCACAGTGGGGA	.	85.0	5.0	84.0	0.0	.	63	.	.	.	none	.	.	PASS	Atlas-SNP
VGF	7425	hgsc.bcm.edu	hg19	7	100806695	100806695	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	.	VGF	NM_003378	exon2	c.A1430T	p.E477V	TTCTCCTCCACCT	.	56.0	15.0	73.0	0.0	.	29	.	.	.	none	.	.	PASS	Atlas-SNP
TBXAS1	6916	hgsc.bcm.edu	hg19	7	139719838	139719838	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	.	TBXAS1	NM_030984	exon12	c.T1381C	p.X461Q	TGCAGCTAGAATC	.	79.0	4.0	100.0	0.0	.	121	.	.	.	none	.	.	PASS	Atlas-SNP
CPA6	57094	hgsc.bcm.edu	hg19	8	68397000	68397000	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	.	CPA6	NM_020361	exon7	c.C661T	p.P221S	TGGCTGGGTCACT	.	85.0	21.0	74.0	0.0	.	69	.	.	.	none	.	.	PASS	Atlas-SNP
MROH1	727957	hgsc.bcm.edu	hg19	8	145267981	145267981	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	.	.	NM_001099280	exon13	c.C1226T	p.P409L	CTGCTCCGCAGCC	.	118.0	21.0	134.0	0.0	.	.	.	.	.	none	.	.	PASS	Atlas-SNP
C10orf137	26098	hgsc.bcm.edu	hg19	10	127442312	127442312	+	Missense_Mutation	SNP	A	A	G	rs199695348		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	.	C10orf137	NM_001202438	exon24	c.A3443G	p.N1148S	GTCTCAATCGAGA	.	120.0	42.0	132.0	0.0	.	153	.	.	.	weak	A|0.999;G|0.001	0.001	PASS	Atlas-SNP
SLCO2B1	11309	hgsc.bcm.edu	hg19	11	74883496	74883496	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	.	SLCO2B1	NM_007256	exon7	c.G854C	p.G285A	CTGCCGGTGCAGT	.	103.0	30.0	84.0	0.0	.	84	.	.	.	none	.	.	PASS	Atlas-SNP
GTSF1	121355	hgsc.bcm.edu	hg19	12	54857070	54857070	+	Silent	SNP	A	A	G	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	.	GTSF1	NM_144594	exon4	c.T129C	p.D43D	TGCAACATCAGGA	.	93.0	27.0	85.0	0.0	.	15	.	.	.	none	.	.	PASS	Atlas-SNP
COCH	1690	hgsc.bcm.edu	hg19	14	31353851	31353851	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	.	COCH	NM_004086	exon9	c.A722C	p.N241T	GGGGTAATTCCAA	.	71.0	18.0	64.0	0.0	.	54	.	.	.	none	.	.	PASS	Atlas-SNP
CCDC57	284001	hgsc.bcm.edu	hg19	17	80129603	80129603	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	.	CCDC57	NM_198082	exon12	c.G1856C	p.S619T	CGGACGCTGGGCT	.	90.0	15.0	79.0	0.0	.	102	.	.	.	none	.	.	PASS	Atlas-SNP
EPB41L3	23136	hgsc.bcm.edu	hg19	18	5416056	5416056	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	.	EPB41L3	NM_012307	exon13	c.A1828T	p.N610Y	AAAGGTTGGGGAA	.	138.0	37.0	137.0	0.0	.	222	.	.	.	none	.	.	PASS	Atlas-SNP
TMEM205	374882	hgsc.bcm.edu	hg19	19	11453637	11453637	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	.	TMEM205	NM_033408	exon4	c.C424A	p.Q142K	GCAGCTGGCGGTA	.	149.0	48.0	111.0	0.0	.	14	.	.	.	none	.	.	PASS	Atlas-SNP
ZNF844	284391	hgsc.bcm.edu	hg19	19	12187475	12187475	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	ZNF844,NS,carcinoma,0,6	ZNF844	NM_001136501	exon4	c.C1540G	p.H514D	CCTTCACATCTGC	.	61.0	3.0	48.0	0.0	.	69	.	.	.	none	.	.	PASS	Atlas-SNP
ZNF844	284391	hgsc.bcm.edu	hg19	19	12187502	12187502	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	ZNF844,bladder,carcinoma,0,3	ZNF844	NM_001136501	exon4	c.A1567G	p.K523E	TGCATGAAAGGAC	.	43.0	3.0	30.0	0.0	.	69	.	.	.	none	.	.	PASS	Atlas-SNP
ZNF813	126017	hgsc.bcm.edu	hg19	19	53995130	53995130	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	ZNF813_ENST00000396403,NS,carcinoma,0,1	ZNF813	NM_001004301	exon4	c.T1644G	p.D548E	TGGAGATAAACCT	.	49.0	2.0	47.0	0.0	.	81	.	.	.	none	.	.	PASS	Atlas-SNP
ISOC2	79763	hgsc.bcm.edu	hg19	19	55966664	55966664	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	.	ISOC2	NM_024710	exon4	c.C430T	p.Q144X	GGACCTGCAGCCC	.	28.0	5.0	29.0	0.0	.	16	.	.	.	none	.	.	PASS	Atlas-SNP
PTPRT	11122	hgsc.bcm.edu	hg19	20	41306544	41306544	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	.	PTPRT	NM_007050	exon7	c.C1115A	p.P372Q	CCTGGCGGTCCCG	.	150.0	42.0	124.0	0.0	.	372	.	.	.	none	.	.	PASS	Atlas-SNP
MBNL3	55796	hgsc.bcm.edu	hg19	X	131540269	131540269	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	.	MBNL3	NM_018388	exon2	c.A329T	p.Q110L	GACATTTGAGCGT	.	183.0	62.0	180.0	0.0	.	62	.	.	.	none	.	.	PASS	Atlas-SNP
ATP6AP1	537	hgsc.bcm.edu	hg19	X	153657422	153657422	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	.	ATP6AP1	NM_001183	exon2	c.C190A	p.H64N	GACACTCATGAAG	.	130.0	33.0	137.0	0.0	.	46	.	.	.	none	.	.	PASS	Atlas-SNP
RGAG1	57529	hgsc.bcm.edu	hg19	X	109695056	109695056	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	.	RGAG1	NM_020769	exon3	c.1210delA	p.R404fs	.	.	661.0	185.0	585.0	0.0	.	168	.	0.279879	0	none	.	.	PASS	Atlas-INDEL
POLR2B	5431	hgsc.bcm.edu	hg19	4	57888371	57888373	+	In_Frame_Del	DEL	AAG	AAG	-	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	AAG	AAG	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	.	POLR2B	NM_000938	exon18	c.2473_2475del	p.825_825del	.	.	81.0	13.0	62.0	0.0	.	108	.	0.160494	0	none	.	.	PASS	Atlas-INDEL
CMYA5	202333	hgsc.bcm.edu	hg19	5	79034426	79034426	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	.	CMYA5	NM_153610	exon2	c.9837delA	p.E3279fs	.	.	144.0	25.0	110.0	0.0	.	643	.	0.173611	0	none	.	.	PASS	Atlas-INDEL
APOB	338	hgsc.bcm.edu	hg19	2	21224920	21224921	+	Frame_Shift_Ins	INS	-	-	G	novel		TCGA-A4-7828-01A-11D-2136-08	TCGA-A4-7828-10A-01D-2136-08	-	-	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	89b510b4-b46f-44f1-b973-0e7b01c3afd1	df0c98a4-c394-4d62-ac84-e6893a743883	.	APOB	NM_000384	exon29	c.13374_13375insC	p.P4458fs	.	.	117.0	33.0	87.0	0.0	.	761	.	0.282051	0	none	.	.	PASS	Atlas-INDEL