Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	Trna_tot	Trna_ref	Trna_var	Trna_alt1	Trna_alt2
ZNF436	80818	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	23693623	23693623	+	Silent	SNP	G	G	A	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	ZNF436-153	NM_001077195	exon3	c.C72T	p.T24T	TTCCCGGGTGAGA	.	131	47	108	0	.	3	1	2	0	0
KLF17	128209	hgsc.bcm.edu;ucsc.edu;bcgsc.ca	37	1	44595405	44595405	+	Silent	SNP	C	C	G	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	KLF17-92	NM_173484	exon2	c.C462G	p.P154P	GATGCCCCCCAAT	.	43	16	35	0	.	0	0	0	0	0
LRRC8C	84230	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	90179946	90179946	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	LRRC8C-97	NM_032270	exon3	c.A1817C	p.H606P	TTCCTCATGCTGT	.	121	40	80	0	.	1	1	0	0	0
EVI5	7813	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	93073196	93073196	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	EVI5-136	NM_005665	exon15	c.A1868T	p.K623I	AGTCCTTTGTTCT	.	88	45	47	0	.	2	0	2	0	0
GPSM2	29899	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	109439646	109439646	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	GPSM2-227	NM_013296	exon3	c.T217G	p.F73V	GCTTATTTCTATT	.	67	29	62	1	.	1	0	1	0	0
HMCN1	83872	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	186082053	186082053	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	HMCN1-113	NM_031935	exon72	c.A11099G	p.K3700R	CAGGAAAGACTAC	.	69	24	46	0	.	0	0	0	0	0
CUBN	8029	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	16941145	16941145	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	CUBN-166	NM_001081	exon54	c.C8448G	p.I2816M	GGATCTGATTGTA	.	88	38	89	0	.	12	5	7	0	0
JMJD1C	221037	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	64974605	64974605	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	JMJD1C-275	NM_032776	exon8	c.A1322C	p.K441T	TGTTTTTTATCTT	.	53	16	30	0	.	2	1	1	0	0
LDB1	8861	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	103871028	103871028	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	LDB1-289	NM_001113407	exon3	c.T158C	p.L53P	GGCTCCAGGTATG	.	155	68	125	0	.	19	13	6	0	0
FAM53B	9679	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	126311947	126311947	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	FAM53B-91	NM_014661	exon5	c.C1133T	p.S378L	CTGTCTGACTCCT	.	38	23	31	0	.	4	2	2	0	0
ADAM12	8038	broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	127806755	127806755	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	ADAM12-716	NM_021641	exon6	c.A464C	p.E155A	ATTGGTTCTAAGA	.	92	36	56	2	.	0	0	0	0	0
TRPM5	29850	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	2428360	2428360	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	TRPM5-137	NM_014555	exon20	c.G3107A	p.R1036Q	TGCTCCCGCTTGT	.	24	15	20	0	.	0	0	0	0	0
CALCB	797	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	15096663	15096663	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	CALCB-90	NM_000728	exon3	c.T143A	p.L48H	CGCGCCTCCTGCT	.	419	177	343	0	.	0	0	0	0	0
PIK3C2A	5286	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	17150900	17150900	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	PIK3C2A-1310	NM_002645	exon12	c.A2346C	p.R782S	TCCCTTTCTCTGC	.	153	55	96	0	.	8	7	1	0	0
PPFIA1	8500	broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	70202285	70202285	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	PPFIA1-228	NM_177423	exon19	c.A2507T	p.D836V	AGACGGATAACTC	.	144	55	136	1	.	16	8	8	0	0
MOGAT2	80168	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	75431106	75431106	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	MOGAT2-228	NM_025098	exon2	c.C161A	p.A54E	TGTATGCGGCCTG	.	131	47	81	0	.	0	0	0	0	0
ARCN1	372	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	118464375	118464375	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	ARCN1-90	NM_001655	exon8	c.T1203G	p.N401K	AGATAATTTAGAA	.	98	42	94	0	.	19	10	9	0	0
SORL1	6653	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	121475939	121475939	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	SORL1-228	NM_003105	exon34	c.T4769G	p.V1590G	ATAATGTCTACTA	.	79	30	61	0	.	0	0	0	0	0
IGSF9B	22997	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	11	133789844	133789844	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	IGSF9B-68	NM_014987	exon18	c.C3776T	p.S1259F	CTCTGGGAGGGGG	.	62	27	32	0	.	0	0	0	0	0
ING4	51147	hgsc.bcm.edu;ucsc.edu;bcgsc.ca	37	12	6760401	6760401	+	Splice_Site	SNP	C	C	T	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	ING4-515	NM_001127586	exon8	c.563-1G>A	.	CAAAACCTGAAAC	.	238	90	162	0	.	0	0	0	0	0
BHLHE41	79365	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	26276658	26276658	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	BHLHE41-226	NM_030762	exon4	c.A251G	p.E84G	GCTTTCTCCAGAT	.	48	19	44	0	.	18	9	9	0	0
ERGIC2	51290	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	29502995	29502995	+	Silent	SNP	A	A	T	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	ERGIC2-91	NM_016570	exon9	c.T579A	p.I193I	ATGTGGAATTGCC	.	214	77	168	0	.	0	0	0	0	0
OTOGL	283310	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	80730767	80730767	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	.	NM_173591	exon41	c.A4816T	p.N1606Y	ATTGTCAATCGGT	.	12	5	30	0	.	0	0	0	0	0
PPP1CC	5501	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	111168372	111168372	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	PPP1CC-1082	NM_002710	exon3	c.G380A	p.C127Y	CTGGCACATTCAT	.	19	7	13	0	.	35	18	17	0	0
SSTR1	6751	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	14	38678806	38678806	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	SSTR1-947	NM_001049	exon3	c.T212C	p.V71A	GCCTGGTGGGGCT	.	133	48	122	0	.	0	0	0	0	0
ZBTB1	22890	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	14	64988346	64988346	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	ZBTB1-91	NM_014950	exon2	c.C124G	p.L42V	GCAGTTCTAGCTG	.	87	27	63	0	.	7	4	3	0	0
NPAP1	23742	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	15	24921405	24921405	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	.	NM_018958	exon1	c.C391T	p.R131C	TCACCACGTGAGC	.	75	26	51	0	.	0	0	0	0	0
TJP1	7082	ucsc.edu;bcgsc.ca	37	15	30010892	30010892	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	C	C	.	.	.	.	Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	TJP1-95	NM_003257	exon21	c.G3454T	p.A1152S	CGGATGCTCTAGG	.	230	76	182	2	.	20	8	12	0	0
C15orf52	388115	broad.mit.edu;ucsc.edu;bcgsc.ca	37	15	40631768	40631768	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	C15orf52-153	NM_207380	exon3	c.C308T	p.T103I	GCTGGTGTGGTCA	.	108	49	109	1	.	5	4	1	0	0
UNC13C	440279	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	15	54557623	54557623	+	Silent	SNP	T	T	A	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	UNC13C-51	NM_001080534	exon8	c.T3747A	p.V1249V	TCAAGTTGGAAAG	.	174	70	118	0	.	0	0	0	0	0
SNX1	6642	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	15	64424017	64424017	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	SNX1-226	NM_003099	exon11	c.G1147C	p.E383Q	CACCAGGAACAGG	.	174	69	127	0	.	75	48	27	0	0
ANP32A	8125	ucsc.edu	37	15	69072440	69072440	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	C	C	.	.	.	.	Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	.	NM_006305	exon7	c.G730T	p.E244X	CTCCCTCATCTTC	.	48	22	54	3	.	44	26	18	0	0
ALPK3	57538	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	15	85411510	85411510	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	ALPK3-337	NM_020778	exon14	c.G5547C	p.R1849S	TGGCAGGAAAGGC	.	92	41	65	0	.	6	0	6	0	0
LOC100132247	0	broad.mit.edu;bcgsc.ca	37	16	22545906	22545906	+	Silent	SNP	C	C	T	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	.	NM_001135865	exon7	c.C1602T	p.A534A	ACCTGCCGAGCGT	.	71	14	27	0	.	345	322	23	0	0
ZNF668	79759	broad.mit.edu;bcgsc.ca	37	16	31072415	31072415	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	ZNF668-585	NM_001172669	exon4	c.G1903C	p.G635R	GCATTCCTAGCAA	.	93	34	93	2	.	7	4	3	0	0
CES3	23491	broad.mit.edu	37	16	66997181	66997181	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	CES3-517	NM_024922	exon2	c.T182G	p.L61R	TCTTTCTGGGCAT	.	91	10	64	3	.	3	3	0	0	0
PKD1L2	114780	broad.mit.edu;ucsc.edu;bcgsc.ca	37	16	81193369	81193369	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	PKD1L2-92	.	.	.	.	AGTAGACCCCTTC	.	125	52	103	0	.	0	0	0	0	0
SSH2	85464	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	27959441	27959441	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	SSH2-92	NM_033389	exon15	c.A2690T	p.K897M	GAATTCTTACGAG	.	189	106	97	0	.	2	0	2	0	0
TGIF1	7050	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	18	3452341	3452341	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	TGIF1-227	NM_170695	exon1	c.G364C	p.G122R	GCACAGGGTCCAG	.	99	50	98	0	.	0	0	0	0	0
PTPRM	5797	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	18	8378412	8378412	+	Silent	SNP	G	G	T	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	PTPRM-228	NM_001105244	exon27	c.G3612T	p.R1204R	ATTCCGGGTAAGT	.	150	57	82	0	.	0	0	0	0	0
KIAA1468	57614	bcgsc.ca	37	18	59954615	59954615	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	KIAA1468-158	NM_020854	exon26	c.G3285T	p.L1095F	AGCCTTGGTGAAC	.	82	5	74	0	.	14	14	0	0	0
FUT6	2528	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	5832530	5832530	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	FUT6-90	NM_000150	exon3	c.C49A	p.L17M	TGGTCAGACAGCA	.	139	61	113	0	.	17	6	11	0	0
CYP4F8	11283	broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	15739650	15739650	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	CYP4F8-90	.	.	.	.	CGGGGCCCAGGTG	.	66	30	36	0	.	0	0	0	0	0
IFNL3	282617	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	19	39735444	39735444	+	Missense_Mutation	SNP	C	C	T	rs201018323		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	.	NM_172139	exon1	c.G164A	p.R55K	TTGGCCCTCTTAA	.	347	107	266	0	.	0	0	0	0	0
PSG4	5672	broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	43708130	43708130	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	PSG4-91	NM_002780	exon2	c.C338T	p.P113L	TCCTGCGTGACAT	.	302	95	236	1	.	0	0	0	0	0
CCDC9	26093	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	47767895	47767895	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	CCDC9-90	NM_015603	exon6	c.G498T	p.K166N	TGAGAAGATGAAT	.	52	17	36	0	.	7	5	2	0	0
ZNF600	162966	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	53269420	53269420	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	ZNF600-90	NM_198457	exon3	c.A1589T	p.E530V	CTGCACTCATTAC	.	109	37	67	0	.	12	10	2	0	0
ZNF761	388561	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	53959526	53959526	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	ZNF761-91	NM_001008401	exon7	c.T1765G	p.F589V	TACAGTTTCAAAT	.	103	47	83	0	.	3	1	2	0	0
NBAS	51594	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	15519770	15519770	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	NBAS-94	NM_015909	exon30	c.C3546A	p.F1182L	AGAATTGAAGTAC	.	150	61	110	0	.	6	3	3	0	0
ANKRD30BL	554226	bcgsc.ca	37	2	132905741	132905741	+	RNA	SNP	G	G	A	rs111770980		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	.	.	.	.	.	TCAGCCGTGTCAG	.	329	17	284	2	.	0	0	0	0	0
RIF1	55183	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	152320162	152320162	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	RIF1-300	NM_018151	exon30	c.A4128T	p.K1376N	GGAGAAAAATGTA	.	25	11	26	0	.	4	1	3	0	0
PLA2R1	22925	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	160825863	160825863	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	PLA2R1-93	NM_001195641	exon19	c.G2668C	p.D890H	TTCCATCTCTCCA	.	59	15	57	0	.	0	0	0	0	0
TTLL4	9654	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	219611762	219611762	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	TTLL4-93	NM_014640	exon9	c.A2011C	p.K671Q	GGGAGGAAGGACC	.	197	73	109	0	.	11	7	4	0	0
CCDC108	255101	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	219878079	219878079	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	CCDC108-94	NM_194302	exon24	c.G3859A	p.G1287S	TCACACCTATGAA	.	179	76	114	0	.	0	0	0	0	0
SPEG	10290	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	220349151	220349151	+	Silent	SNP	C	C	T	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	SPEG-383	NM_005876	exon30	c.C6966T	p.S2322S	CAGTAGCAGCATC	.	52	15	44	0	.	0	0	0	0	0
STK11IP	114790	hgsc.bcm.edu	37	2	220470428	220470428	+	Silent	SNP	G	G	T	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	STK11IP-91	NM_052902	exon8	c.G750T	p.L250L	GATACTGCGAGGC	.	43	4	27	0	.	4	4	0	0	0
CRNKL1	51340	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	20	20026023	20026023	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	CRNKL1-137	NM_016652	exon7	c.T1213A	p.F405I	CAAAGAATTCCAC	.	153	54	110	0	.	7	5	2	0	0
CST1	1469	broad.mit.edu	37	20	23728528	23728528	+	Silent	SNP	C	C	T	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	CST1-91	NM_001898	exon3	c.G351A	p.L117L	AGAGCACAACTGT	.	112	6	66	2	.	0	0	0	0	0
FRG1B	284802	bcgsc.ca	37	20	29623219	29623219	+	RNA	SNP	A	A	G	rs34726194		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	FRG1B-22	.	.	.	.	TCGACAATGGTCT	.	773	25	538	7	.	34	34	0	0	0
KIAA1755	85449	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	20	36841970	36841970	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	KIAA1755-95	NM_001029864	exon14	c.G3077A	p.R1026Q	CCTGCCCGGCTCA	.	51	23	47	0	.	0	0	0	0	0
CABLES2	81928	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	20	60967982	60967982	+	Silent	SNP	C	C	G	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	CABLES2-91	NM_031215	exon7	c.G978C	p.S326S	CATGTACGACGCA	.	147	52	118	0	.	0	0	0	0	0
DGCR8	54487	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	22	20077782	20077782	+	Splice_Site	SNP	G	G	C	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	DGCR8-90	NM_001190326	exon5	c.1306+1G>C	.	CCGTTGGTGAGTT	.	57	25	36	0	.	0	0	0	0	0
CELSR1	9620	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	22	46931730	46931730	+	Silent	SNP	G	G	A	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	CELSR1-525	NM_014246	exon1	c.C1338T	p.Y446Y	CTCGATGTACACG	.	28	9	29	0	.	4	3	1	0	0
IL17RC	84818	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	9971714	9971714	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	IL17RC-92	NM_153461	exon14	c.T1372C	p.S458P	CCAGACTCCCTGG	.	116	44	86	0	.	0	0	0	0	0
SCAP	22937	broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	47460314	47460314	+	Missense_Mutation	SNP	C	C	A	rs199794833	alternate_allele	TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	SCAP-91	NM_012235	exon14	c.G1960T	p.V654F	GGATGACGGGCAG	.	23	4	42	0	.	38	19	19	0	0
RFT1	91869	ucsc.edu;bcgsc.ca	37	3	53126088	53126088	+	Splice_Site	SNP	T	T	A	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	T	T	.	.	.	.	Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	RFT1-91	NM_052859	exon14	c.1459-2A>T	.	AATACCTGGGGAA	.	161	80	132	1	.	1	0	1	0	0
DZIP1L	199221	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	137813760	137813760	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	DZIP1L-92	NM_001170538	exon5	c.T652A	p.W218R	GGGTCCACTTTAG	.	166	58	103	0	.	2	0	2	0	0
ARAP2	116984	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	36069579	36069579	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	ARAP2-93	NM_015230	exon33	c.C5065T	p.R1689W	TTGACCGTTGTAG	.	79	33	76	0	.	7	2	5	0	0
GABRB1	2560	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	47427723	47427723	+	Silent	SNP	C	C	G	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	GABRB1-92	NM_000812	exon9	c.C1113G	p.T371T	CAGCACCCTGGAA	.	128	50	77	0	.	0	0	0	0	0
PRR16	51334	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	120021685	120021685	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	PRR16-71	NM_016644	exon3	c.C127A	p.Q43K	GACCTACAGCTGG	.	87	37	87	0	.	0	0	0	0	0
CCNI2	645121	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	132088594	132088594	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	CCNI2-68	NM_001039780	exon6	c.G1042A	p.V348I	GAACTTGTAATGC	.	98	38	78	0	.	0	0	0	0	0
FAM13B	51306	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	137354741	137354741	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	.	NM_001101800	exon3	c.A60G	p.I20M	TCCAAATATTTTG	.	256	120	188	0	.	1	1	0	0	0
FAM217A	222826	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	4069042	4069042	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	.	NM_173563	exon7	c.T1415C	p.L472P	CGGTAAAGTTTCT	.	97	35	70	0	.	0	0	0	0	0
MYLIP	29116	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	16143330	16143330	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	MYLIP-91	NM_013262	exon4	c.A544G	p.M182V	TCGGCAATGGAAA	.	158	77	102	0	.	20	8	12	0	0
SLC17A1	6568	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	25811999	25811999	+	Splice_Site	SNP	C	C	T	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	SLC17A1-94	NM_005074	exon10	c.898-1G>A	.	CCCATTCTGAAGA	.	73	26	61	0	.	4	1	3	0	0
GCLC	2729	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	53370243	53370243	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	GCLC-515	NM_001498	exon12	c.C1342G	p.L448V	TGGTGAGCAGTAC	.	178	72	137	0	.	11	7	4	0	0
SMIM8	57150	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	88046811	88046811	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	.	NM_001042493	exon3	c.A62C	p.Q21P	AGTTTCAAAGCCC	.	64	31	41	0	.	3	2	1	0	0
MET	4233	hgsc.bcm.edu;bcgsc.ca	37	7	116411675	116411675	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	MET-5874	NM_001127500	exon13	c.T2908G	p.F970V	GGGTTTTTCCTGT	.	97	15	52	0	.	124	124	0	0	0
MTUS1	57509	hgsc.bcm.edu;ucsc.edu;bcgsc.ca	37	8	17579357	17579357	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	MTUS1-92	NM_001001931	exon1	c.A54T	p.K18N	AAAGATTTTTGAA	.	74	35	57	0	.	0	0	0	0	0
LPL	4023	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	8	19811710	19811710	+	Silent	SNP	C	C	T	rs118204076	alternate_allele	TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	LPL-92	NM_000237	exon5	c.C621T	p.D207D	TGTAGACGTCTTA	.	155	73	109	0	.	1	1	0	0	0
PPP2R2A	5520	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	8	26211991	26211991	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	PPP2R2A-659	NM_001177591	exon4	c.T218C	p.I73T	ACAAAATCCAGTC	.	38	12	35	0	.	0	0	0	0	0
ASPH	444	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	8	62460750	62460750	+	Silent	SNP	C	C	T	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	ASPH-93	NM_004318	exon21	c.G1644A	p.E548E	CCCAAGCTCATAC	.	134	54	102	0	.	16	7	9	0	0
TRAPPC9	83696	broad.mit.edu;ucsc.edu;bcgsc.ca	37	8	141301159	141301159	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	TRAPPC9-228	NM_031466	exon12	c.G2081C	p.G694A	ACATCTCCTTGAA	.	184	81	139	1	.	9	6	3	0	0
LRRC14	9684	broad.mit.edu	37	8	145745730	145745730	+	Silent	SNP	A	A	G	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	LRRC14-90	NM_001272036	exon4	c.A438G	p.T146T	TCGCACATGCATT	.	29	4	28	0	.	3	2	1	0	0
ODF2	4957	broad.mit.edu;ucsc.edu;bcgsc.ca	37	9	131256869	131256869	+	Silent	SNP	T	T	C	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	ODF2-69	NM_153435	exon17	c.T2025C	p.A675A	GCTGGCTGAGTGC	.	228	88	194	1	.	8	4	4	0	0
NUP214	8021	broad.mit.edu;ucsc.edu;bcgsc.ca	37	9	134019825	134019825	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	NUP214-1131	NM_005085	exon12	c.G1453C	p.G485R	TCCTTTGGTTCTT	.	77	30	65	1	.	2	1	1	0	0
KDM5C	8242	broad.mit.edu;ucsc.edu;bcgsc.ca	37	X	53245084	53245084	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	KDM5C-1272	NM_004187	exon7	c.A856G	p.T286A	GCGATGTTGACTC	.	106	84	72	1	.	16	0	16	0	0
RBMXL3	139804	hgsc.bcm.edu	37	X	114425196	114425196	+	Missense_Mutation	SNP	G	G	A	rs12399211		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	.	NM_001145346	exon1	c.G1192A	p.D398N	TCGCCCGACGCCC	.	59	53	6	0	G|0.483;A|0.517	0	0	0	0	0
ATP11C	286410	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	X	138880882	138880882	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	ATP11C-198	NM_001010986	exon9	c.T740G	p.L247R	AGCAAGAGATTTT	.	59	49	56	0	.	3	0	3	0	0
EDEM3	80267	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	1	184723718	184723718	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	EDEM3-91	NM_025191	exon1	c.63delA	p.L21fs	.	.	54	13	89	0	.	0	0	0	0	0
OR5AR1	219493	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	11	56432020	56432028	+	In_Frame_Del	DEL	CCCTTGATC	CCCTTGATC	-	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	CCCTTGATC	CCCTTGATC	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	OR5AR1-68	NM_001004730	exon1	c.859_867del	p.287_289del	.	.	169	27	147	0	.	0	0	0	0	0
SLX4	84464	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	16	3645657	3645657	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	SLX4-94	NM_032444	exon9	c.1962delG	p.G654fs	.	.	103	41	75	0	.	0	0	0	0	0
STAT5B	6777	broad.mit.edu	37	17	40370236	40370236	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	STAT5B-850	NM_012448	exon9	c.1102delC	p.Q368fs	TCACCTGGGGGGG	.	383	9	182	0	.	0	0	0	0	0
IL5RA	3568	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	3	3139630	3139630	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	IL5RA-91	NM_001243099	exon7	c.633delT	p.L211fs	.	.	217	86	168	0	.	0	0	0	0	0
ARL13B	200894	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	3	93761993	93761993	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	ARL13B-91	NM_182896	exon7	c.933delT	p.N311fs	.	.	164	56	158	0	.	0	0	0	0	0
MTRR	4552	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	5	7895903	7895903	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	MTRR-91	NM_024010	exon12	c.1695delC	p.I565fs	.	.	81	39	84	0	.	0	0	0	0	0
GBX1	2636	broad.mit.edu	37	7	150864527	150864529	+	In_Frame_Del	DEL	GCG	GCG	-	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	GCG	GCG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	GBX1-68	NM_001098834	exon1	c.107_109del	p.36_37del	CGGAGCGCGGCGG	.	6	2	4	0	.	0	0	0	0	0
ADAM9	8754	broad.mit.edu	37	8	38854664	38854670	+	Frame_Shift_Del	DEL	GGTGCGG	GGTGCGG	-	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	GGTGCGG	GGTGCGG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	ADAM9-227	NM_003816	exon1	c.82_88del	p.28_30del	GTCCTCGGTGCGG	.	8	4	15	0	.	0	0	0	0	0
FOXD4L3	286380	hgsc.bcm.edu;broad.mit.edu	37	9	70919081	70919082	+	Frame_Shift_Del	DEL	GG	GG	-	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	GG	GG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	FOXD4L3-40	NM_199135	exon1	c.1214_1215del	p.405_405del	.	.	144	27	186	0	.	0	0	0	0	0
WDR20	91833	hgsc.bcm.edu;bcgsc.ca	37	14	102674963	102674964	+	Frame_Shift_Ins	INS	-	-	A	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	WDR20-90	NM_001242417	exon4	c.549_550insA	p.V183fs	.	.	60	14	50	0	.	0	0	0	0	0
NEFH	4744	hgsc.bcm.edu	37	22	29885589	29885590	+	In_Frame_Ins	INS	-	-	CCCCTGAGAAGGCCAAGT	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	NEFH-90	NM_021076	exon4	c.1960_1961insCCCCTGAGAAGGCCAAGT	p.S654delinsSPEKAKS	.	.	309	49	205	0	.	0	0	0	0	0
EOMES	8320	broad.mit.edu;bcgsc.ca	37	3	27760357	27760358	+	Frame_Shift_Ins	INS	-	-	T	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	EOMES-156	NM_005442	exon4	c.1186_1187insA	p.Y396fs	GTTGGTATTTGTG	.	38	11	25	0	.	0	0	0	0	0
MET	4233	hgsc.bcm.edu	37	7	116411633	116411634	+	In_Frame_Ins	INS	-	-	TTGTCTCAATATCAACAGCACTGTTATTACTACTTGGGT	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	MET-5874	NM_001127500	exon13	c.2866_2867insTTGTCTCAATATCAACAGCACTGTTATTACTACTTGGGT	p.V956delinsVVSISTALLLLLGF	.	.	110	20	68	0	.	0	0	0	0	0
PLXNA4	91584	hgsc.bcm.edu;bcgsc.ca	37	7	131859582	131859583	+	Frame_Shift_Ins	INS	-	-	AA	novel		TCGA-HE-A5NH-01A-11D-A26P-10	TCGA-HE-A5NH-10A-01D-A26P-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	33b7e799-ad10-498f-9948-8ce433311539	10fb6a4b-3cb8-484e-abfd-0987cdecb32e	.	PLXNA4-91	NM_020911	exon21	c.3972_3973insTT	p.V1324fs	.	.	172	55	120	0	.	0	0	0	0	0