Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	Trna_tot	Trna_ref	Trna_var	Trna_alt1	Trna_alt2
PIK3CD	5293	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	9782066	9782066	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	PIK3CD-1311	NM_005026	exon17	c.G2089T	p.D697Y	CTGAATGACTTCG	.	99	26	123	0	.	3	2	1	0	0
TAS1R2	80834	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	19186021	19186021	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	TAS1R2-93	NM_152232	exon1	c.T134A	p.M45K	CCCTTCATGTTGG	.	107	16	162	0	.	0	0	0	0	0
AHDC1	27245	ucsc.edu	37	1	27875553	27875553	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	AHDC1-90	NM_001029882	exon6	c.C3074T	p.T1025I	CCCCCGGTAGGCG	.	40	4	40	0	.	37	37	0	0	0
LRRC8C	84230	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	90180336	90180336	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	LRRC8C-97	NM_032270	exon3	c.T2207C	p.I736T	TGAAGATTGGAAA	.	88	7	103	0	.	15	12	3	0	0
FCRL3	115352	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	157667660	157667660	+	Silent	SNP	G	G	A	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	FCRL3-156	NM_052939	exon5	c.C348T	p.V116V	CAGAATGACATTG	.	70	27	72	1	.	0	0	0	0	0
IER5	51278	hgsc.bcm.edu	37	1	181058618	181058618	+	Missense_Mutation	SNP	C	C	G	rs1416829		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	IER5-227	NM_016545	exon1	c.C580G	p.R194G	ACCCCCCGCGCTG	.	3	3	0	0	C|0.566;G|0.434	0	0	0	0	0
PRELP	5549	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	203455866	203455866	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	PRELP-516	NM_201348	exon3	c.C1006A	p.L336I	AACGACCTAGTGG	.	125	36	142	0	.	209	208	0	0	1
ITGA8	8516	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	15688933	15688933	+	Silent	SNP	G	G	A	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	ITGA8-230	NM_003638	exon12	c.C1119T	p.D373D	CTGGGGGTCTCTG	.	106	21	130	0	.	6	6	0	0	0
CUBN	8029	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	16916468	16916468	+	Silent	SNP	G	G	T	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	CUBN-166	NM_001081	exon58	c.C9141A	p.I3047I	TGTGATGATTCCA	.	89	24	101	0	.	1	1	0	0	0
UBTD1	80019	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	99327795	99327795	+	Silent	SNP	G	G	A	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	UBTD1-90	NM_024954	exon2	c.G195A	p.K65K	CCGCAAGGAGATC	.	155	24	195	0	.	106	68	38	0	0
SFRP5	6425	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	99527530	99527530	+	Missense_Mutation	SNP	G	G	T	rs199605298		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	SFRP5-658	NM_003015	exon3	c.C695A	p.P232Q	GGGCCCGGCTTGA	.	97	43	135	0	G|0.999;T|0.001	0	0	0	0	0
CNIH2	254263	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	66049735	66049735	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	CNIH2-90	NM_182553	exon2	c.A87G	p.I29M	GATCATAGCCTTT	.	42	10	86	0	.	0	0	0	0	0
NPAS4	266743	broad.mit.edu	37	11	66191471	66191471	+	Silent	SNP	C	C	A	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	NPAS4-90	NM_178864	exon7	c.C1110A	p.P370P	GGCTCCCAGAAGC	.	222	8	317	0	.	0	0	0	0	0
EXPH5	23086	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	108380880	108380880	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	EXPH5-95	NM_015065	exon6	c.G5354A	p.W1785X	GGTTCCCACTCCA	.	107	46	188	0	.	1	0	1	0	0
KRT6A	3853	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	52882316	52882316	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	KRT6A-27	NM_005554	exon7	c.C1220T	p.A407V	ATGGCGGCCTGCA	.	88	26	121	1	.	0	0	0	0	0
ERP29	10961	broad.mit.edu	37	12	112451270	112451270	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	ERP29-90	NM_001034025	exon1	c.A1G	p.M1V	GGCGATATGGCTG	.	91	4	145	0	.	159	159	0	0	0
KDM2B	84678	broad.mit.edu;bcgsc.ca	37	12	122016841	122016841	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	KDM2B-638	NM_032590	exon2	c.A137G	p.D46G	TGGCGGTCAATCG	.	173	9	147	0	.	0	0	0	0	0
OR4N4	283694	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	15	22382930	22382930	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	OR4N4-73	NM_001005241	exon1	c.T458C	p.F153S	GGGGTTTTGTCCA	.	312	41	432	0	.	0	0	0	0	0
FURIN	5045	ucsc.edu	37	15	91419099	91419099	+	Silent	SNP	G	G	A	rs141410539		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	FURIN-1083	NM_002569	exon2	c.G129A	p.A43A	CCCAGCGGTGGCC	.	22	4	22	0	G|1.000;A|0.000	202	201	0	0	1
MRPS34	65993	hgsc.bcm.edu	37	16	1822947	1822947	+	Silent	SNP	C	C	G	rs1076695		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	MRPS34-92	NM_023936	exon1	c.G174C	p.V58V	GCGGCGCACGTCG	.	4	4	2	1	C|0.923;G|0.077	1	0	1	0	0
E4F1	1877	broad.mit.edu;ucsc.edu	37	16	2284711	2284711	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	E4F1-187	NM_004424	exon11	c.C1721T	p.P574L	AGAAGCCGTTCAA	.	18	7	12	0	.	36	19	17	0	0
SMG1	23049	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	16	18856756	18856756	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	SMG1-1160	NM_015092	exon39	c.A6214G	p.K2072E	CCTCTTTAAATGG	.	62	33	58	0	.	0	0	0	0	0
PDILT	204474	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	16	20376785	20376785	+	Silent	SNP	G	G	A	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	PDILT-153	NM_174924	exon9	c.C1194T	p.N398N	GACTACGTTGAAG	.	163	39	176	0	.	0	0	0	0	0
RNASEH2A	10535	ucsc.edu	37	19	12917561	12917561	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	RNASEH2A-524	NM_006397	exon1	c.G74A	p.R25H	TGTGCCGCAAGGA	.	13	4	12	0	.	33	33	0	0	0
SYT5	6861	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	55685920	55685920	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	SYT5-90	NM_003180	exon8	c.G925A	p.A309T	TGAAAGCTTCGTT	.	248	62	282	0	.	5	2	3	0	0
ZNF549	256051	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	58049607	58049607	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	ZNF549-91	NM_001199295	exon4	c.C1235G	p.T412R	TCCACACGGGAGA	.	49	8	97	0	.	0	0	0	0	0
ZIK1	284307	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	58101980	58101980	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	ZIK1-91	NM_001010879	exon4	c.G801C	p.W267C	GCCTTGGGAGTGC	.	63	11	78	0	.	0	0	0	0	0
CKAP2L	150468	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	113513875	113513875	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	CKAP2L-90	NM_152515	exon4	c.G1073A	p.S358N	ACTTGGCTGGACT	.	175	64	191	0	.	2	2	0	0	0
TTN	7273	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	179425266	179425266	+	Silent	SNP	A	A	G	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	TTN-636	NM_001267550	exon326	c.T85593C	p.Y28531Y	AACACCATATTTA	.	60	20	72	0	.	0	0	0	0	0
ITGA4	3676	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	182399601	182399601	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	ITGA4-230	NM_000885	exon27	c.T2942C	p.I981T	TGATTATTTCAAG	.	103	29	116	0	.	11	10	1	0	0
NBEAL1	65065	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	204058575	204058575	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	NBEAL1-92	NM_001114132	exon46	c.G6892T	p.D2298Y	AAAATAGACACTT	.	149	42	139	0	.	2	1	1	0	0
USP25	29761	broad.mit.edu	37	21	17138432	17138432	+	Nonsense_Mutation	SNP	C	C	G	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	USP25-663	NM_013396	exon3	c.C240G	p.Y80X	TAGATACATCAGT	.	90	4	76	0	.	56	55	1	0	0
SETD5	55209	hgsc.bcm.edu	37	3	9495547	9495547	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	SETD5-70	NM_001080517	exon17	c.A2471G	p.N824S	AAGACAATGCAGG	.	61	14	52	0	.	0	0	0	0	0
MTMR14	64419	ucsc.edu	37	3	9691415	9691415	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	MTMR14-91	NM_022485	exon1	c.G148A	p.G50S	GGGACCGGCGGCT	.	29	4	27	0	.	0	0	0	0	0
SLC9C1	285335	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	111918287	111918287	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	.	NM_183061	exon20	c.G2404A	p.A802T	TGACAGCAATTTC	.	89	45	86	0	.	0	0	0	0	0
TSC22D2	9819	ucsc.edu	37	3	150128649	150128649	+	Silent	SNP	C	C	T	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	TSC22D2-91	NM_014779	exon1	c.C1512T	p.P504P	GGTGCCCGGAGTT	.	42	4	53	0	.	27	27	0	0	0
N4BP2	55728	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	40103811	40103811	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	N4BP2-602	NM_018177	exon4	c.A346G	p.I116V	AGTAAAATAATGG	.	90	28	69	0	.	1	1	0	0	0
CUTA	51596	hgsc.bcm.edu	37	6	33384696	33384696	+	Splice_Site	SNP	C	C	G	rs113648187	bycluster	TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	CUTA-90	NM_001014837	exon6	c.344+1G>C	.	TTCTCACCGAACA	.	51	3	74	0	G|1.000	0	0	0	0	0
MOXD1	26002	broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	132649712	132649712	+	Missense_Mutation	SNP	C	C	G	rs146988576	byfrequency;alternate_allele	TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	MOXD1-515	NM_015529	exon5	c.G685C	p.G229R	CATGGCCTCTCTG	.	53	17	76	0	C|0.999;T|0.001	20	10	10	0	0
RIPK2	8767	ucsc.edu	37	8	90770295	90770295	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	RIPK2-523	NM_003821	exon1	c.G7A	p.G3R	ATGAACGGGGAGG	.	30	4	21	0	.	15	15	0	0	0
SMU1	55234	hgsc.bcm.edu	37	9	33068839	33068839	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	SMU1-91	NM_018225	exon4	c.A484T	p.M162L	ATGCCATGAGACG	.	59	4	84	2	.	45	45	0	0	0
RBBP7	5931	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	X	16864059	16864059	+	Silent	SNP	A	A	G	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	RBBP7-227	NM_001198719	exon11	c.T1233C	p.F411F	ATGAATAAACTGT	.	70	20	69	0	.	0	0	0	0	0
ITIH6	347365	broad.mit.edu;ucsc.edu;bcgsc.ca	37	X	54777529	54777529	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	.	NM_198510	exon12	c.C3637T	p.R1213C	TGTAGCGGTGTCG	.	34	12	25	0	.	0	0	0	0	0
ALAS2	212	broad.mit.edu	37	X	55051151	55051151	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	ALAS2-131	NM_001037968	exon4	c.G376T	p.G126X	TCCAACCTGTCTT	.	154	7	145	0	.	0	0	0	0	0
MED12	9968	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	X	70349198	70349198	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	MED12-272	NM_005120	exon26	c.G3610T	p.D1204Y	TCCTGCGACCGCC	.	57	13	103	1	.	21	4	17	0	0
ARHGEF6	9459	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	X	135825892	135825892	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	ARHGEF6-227	NM_004840	exon5	c.T513A	p.F171L	CTGCTTAAAGTTG	.	171	50	189	0	.	7	7	0	0	0
ATE1	11101	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	10	123658376	123658376	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	ATE1-90	NM_007041	exon7	c.922delG	p.D308fs	.	.	73	11	82	0	.	0	0	0	0	0
FRG1B	284802	broad.mit.edu;bcgsc.ca	37	20	29628229	29628230	+	RNA	INS	-	-	A	rs71292154		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	FRG1B-22	.	.	.	.	TTAGGGGAAAATG	.	142	13	144	1	-|0.500;A|0.500	0	0	0	0	0
KIAA0146	23514	broad.mit.edu;bcgsc.ca	37	8	48508505	48508506	+	In_Frame_Ins	INS	-	-	AGC	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	KIAA0146-68	NM_001080394	exon9	c.1230_1231insAGC	p.R410delinsRS	AAGAAGAAGCATC	.	53	7	63	0	.	0	0	0	0	0
TMCC1	23023	hgsc.bcm.edu	37	3	129390056	129390057	+	Missense_Mutation	DNP	AG	AG	TT	novel		TCGA-G7-6793-01A-11D-1961-08	TCGA-G7-6793-10A-01D-1962-08	AG	AG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	7ab802f1-4c29-4c65-9073-b2b17d3a7bba	33f384e6-bc1d-4ef9-8886-7319f51cd68b	.	TMCC1		exon4	c.C627A	p.S210T	ACTGGAGGCCACT	.	180.0	10.0	143.0	2.0	.	0	0	0	0	0