Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ACO2 50 hgsc.bcm.edu;ucsc.edu 37 22 41914522 41914522 + Silent SNP G G A novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab ANKRD6 22881 hgsc.bcm.edu;ucsc.edu 37 6 90340623 90340627 + Frame_Shift_Del DEL ATCAG ATCAG - novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 ATCAG ATCAG . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab C8orf47 203111 hgsc.bcm.edu;ucsc.edu 37 8 99101670 99101670 + Missense_Mutation SNP C C T novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab CD300LF 146722 hgsc.bcm.edu;ucsc.edu 37 17 72700848 72700848 + Nonsense_Mutation SNP T T A novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab CERCAM 51148 hgsc.bcm.edu 37 9 131185203 131185209 + Frame_Shift_Del DEL CGGCTGT CGGCTGT - novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 CGGCTGT CGGCTGT . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab CLK4 57396 hgsc.bcm.edu;ucsc.edu 37 5 178045711 178045711 + Missense_Mutation SNP C C T novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab COL17A1 1308 hgsc.bcm.edu;ucsc.edu 37 10 105830254 105830254 + Silent SNP G G T novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab CREB3L2 64764 hgsc.bcm.edu;ucsc.edu 37 7 137593138 137593138 + Missense_Mutation SNP G G A novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab DSN1 79980 hgsc.bcm.edu;ucsc.edu 37 20 35381212 35381212 + Silent SNP A A T novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab ELOVL4 6785 hgsc.bcm.edu;ucsc.edu 37 6 80636042 80636043 + Frame_Shift_Ins INS - - TC novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab EMX1 2016 hgsc.bcm.edu;ucsc.edu 37 2 73161028 73161028 + Missense_Mutation SNP G G A novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab FLNA 2316 hgsc.bcm.edu;ucsc.edu 37 X 153583340 153583340 + Silent SNP C C A novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab GALNT6 11226 hgsc.bcm.edu;ucsc.edu 37 12 51758021 51758021 + Silent SNP G G C novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab HMGXB4 10042 hgsc.bcm.edu 37 22 35661544 35661544 + Frame_Shift_Del DEL A A - novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab IGSF11 152404 hgsc.bcm.edu;ucsc.edu 37 3 118621765 118621765 + Missense_Mutation SNP G G T novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab IKZF3 22806 hgsc.bcm.edu;ucsc.edu 37 17 37948930 37948930 + Missense_Mutation SNP A A T novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab KIAA1244 57221 hgsc.bcm.edu 37 6 138584327 138584327 + Silent SNP C C T novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab KRT12 3859 hgsc.bcm.edu;ucsc.edu 37 17 39021185 39021185 + Missense_Mutation SNP C C A novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab KRT6A 3853 hgsc.bcm.edu 37 12 52881649 52881649 + Missense_Mutation SNP T T C novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab MAN1A1 4121 hgsc.bcm.edu;ucsc.edu 37 6 119623209 119623209 + Missense_Mutation SNP T T G novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab MAP3K15 389840 hgsc.bcm.edu;ucsc.edu 37 X 19398361 19398361 + Missense_Mutation SNP G G C novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab MMP8 4317 hgsc.bcm.edu;ucsc.edu 37 11 102593358 102593358 + Missense_Mutation SNP G G A novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab MYL1 4632 hgsc.bcm.edu;ucsc.edu 37 2 211159133 211159133 + Missense_Mutation SNP G G A novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab OR5T2 219464 hgsc.bcm.edu 37 11 55999588 55999588 + Silent SNP T T C novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab PBRM1 55193 hgsc.bcm.edu;ucsc.edu 37 3 52692298 52692298 + Nonsense_Mutation SNP G G A novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab PLG 5340 hgsc.bcm.edu;ucsc.edu 37 6 161139489 161139489 + Splice_Site SNP G G T novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab PNCK 139728 hgsc.bcm.edu;ucsc.edu 37 X 152936428 152936428 + Silent SNP G G A novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab PSKH1 5681 hgsc.bcm.edu;ucsc.edu 37 16 67942857 67942857 + Missense_Mutation SNP G G A novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab PSMA6 5687 hgsc.bcm.edu;ucsc.edu 37 14 35777217 35777217 + Missense_Mutation SNP A A C novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab QTRT1 81890 hgsc.bcm.edu 37 19 10818183 10818183 + Missense_Mutation SNP C C T novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab RBM15 64783 hgsc.bcm.edu;ucsc.edu 37 1 110888165 110888165 + Silent SNP T T C novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab SACS 26278 hgsc.bcm.edu;ucsc.edu 37 13 23906942 23906942 + Silent SNP G G A novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab SLCO1B3 28234 hgsc.bcm.edu;ucsc.edu 37 12 21014049 21014049 + Missense_Mutation SNP C C T novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab SUGT1 10910 hgsc.bcm.edu;ucsc.edu 37 13 53239772 53239772 + Silent SNP G G A novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab SYNE1 23345 hgsc.bcm.edu;ucsc.edu 37 6 152470618 152470618 + Silent SNP G G A novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab TM2D2 83877 hgsc.bcm.edu;ucsc.edu 37 8 38853913 38853913 + Nonsense_Mutation SNP G G A novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab TNFRSF13B 23495 hgsc.bcm.edu;ucsc.edu 37 17 16852092 16852092 + Missense_Mutation SNP C C G novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab TREML2 79865 hgsc.bcm.edu;ucsc.edu 37 6 41162231 41162231 + Silent SNP C C T novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab VPS13A 23230 hgsc.bcm.edu;ucsc.edu 37 9 79897064 79897064 + Missense_Mutation SNP T T G novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab WDR69 164781 hgsc.bcm.edu;ucsc.edu 37 2 228758531 228758531 + Missense_Mutation SNP A A C novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab ZNF540 163255 hgsc.bcm.edu;ucsc.edu 37 19 38103228 38103228 + Silent SNP T T C novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab ZNF606 80095 hgsc.bcm.edu;ucsc.edu 37 19 58490014 58490014 + Missense_Mutation SNP T T A novel TCGA-DV-5566-01A-01D-1534-10 TCGA-DV-5566-10A-01D-1535-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 39a321cd-dbdf-474b-aead-6e69795470e0 cef01d29-8954-400d-b504-33ce7cc529ab