Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ABCA3 21 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 2328063 2328063 + Missense_Mutation SNP C C T novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 C C C T C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc ACACA 31 broad.mit.edu;hgsc.bcm.edu 37 17 35581913 35581913 + Silent SNP C C T novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc ACSS2 55902 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 33500951 33500951 + Missense_Mutation SNP G G T novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc ACTBL2 345651 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 56778275 56778275 + Missense_Mutation SNP C C A novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc ADRBK1 156 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 67050628 67050628 + Silent SNP T T C novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc ARHGEF3 50650 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 56779390 56779390 + Missense_Mutation SNP A A G novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc C10orf79 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 105942200 105942200 + Missense_Mutation SNP G G T novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc C12orf41 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 49047945 49047945 + Missense_Mutation SNP A A C novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc C1orf103 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 111494480 111494480 + Silent SNP A A T novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc CNGA4 1262 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 6262833 6262833 + Missense_Mutation SNP C C A novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc COL18A1 80781 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 21 46912469 46912469 + Silent SNP G G A novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc CUBN 8029 broad.mit.edu;hgsc.bcm.edu 37 10 16882524 16882524 + Silent SNP A A G novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 A A A G A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc DDX10 1662 broad.mit.edu;hgsc.bcm.edu 37 11 108810996 108810996 + Missense_Mutation SNP T T C novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc FGFR3 2261 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 1807850 1807850 + Missense_Mutation SNP G G T novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 G G G T G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc IGFN1 91156 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 201190737 201190737 + Missense_Mutation SNP C C A novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc KIAA1267 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 44248412 44248412 + Silent SNP T T C novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc LOC651250 0 broad.mit.edu 37 17 66123962 66123962 + RNA SNP C T T novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc MLLT1 4298 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 6270745 6270745 + Missense_Mutation SNP A A T novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc MRVI1 10335 broad.mit.edu 37 11 10647673 10647673 + Missense_Mutation SNP C A A novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc MXRA7 439921 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 74673741 74673741 + Missense_Mutation SNP C C G novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc NUP205 23165 hgsc.bcm.edu;ucsc.edu 37 7 135292022 135292022 + Frame_Shift_Del DEL T T - novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc NUPL2 11097 hgsc.bcm.edu 37 7 23221797 23221798 + In_Frame_Ins INS - - CGGCAGCAACCG novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc PBRM1 55193 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 52661377 52661377 + Nonsense_Mutation SNP T T A novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 T T T A T T Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc RDBP 7936 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 31922556 31922556 + Missense_Mutation SNP C C G novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc SCRN2 90507 broad.mit.edu;ucsc.edu 37 17 45918176 45918176 + Missense_Mutation SNP A T T novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc SEMA4D 10507 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 92008488 92008488 + Missense_Mutation SNP G G A novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc SLC35A1 10559 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 88210968 88210968 + Silent SNP T T C novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc SUPT6H 6830 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 27023953 27023953 + Silent SNP T T C novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc TSEN2 80746 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 12544895 12544895 + Missense_Mutation SNP A A C novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc VHL 7428 hgsc.bcm.edu;ucsc.edu 37 3 10188297 10188297 + Frame_Shift_Del DEL T T - novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc VPS28 51160 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 145649316 145649316 + Missense_Mutation SNP A A C novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc VSIG1 340547 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 107319363 107319363 + Missense_Mutation SNP A A T novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc ZMYM6 9204 broad.mit.edu;hgsc.bcm.edu 37 1 35457966 35457966 + Missense_Mutation SNP A A T novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc ZNF354A 6940 hgsc.bcm.edu 37 5 178140409 178140424 + Frame_Shift_Del DEL CTTTCTATAGTGGGGA CTTTCTATAGTGGGGA - novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 CTTTCTATAGTGGGGA CTTTCTATAGTGGGGA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc ZSCAN16 80345 hgsc.bcm.edu;ucsc.edu 37 6 28097728 28097729 + Frame_Shift_Del DEL AT AT - novel TCGA-CJ-4908-01A-01D-1429-08 TCGA-CJ-4908-11A-01D-1429-08 AT AT . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq dbc5420c-5c60-4d1e-8554-9d2f6e55c502 19effa42-4c58-4a24-9cd0-264cf686c9dc