Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ACSM2A 123876 hgsc.bcm.edu 37 16 20489924 20489925 + Frame_Shift_Ins INS - - C novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 ADIG 149685 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 37214721 37214721 + Missense_Mutation SNP C C A novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 AKR1B15 441282 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 134261744 134261744 + Missense_Mutation SNP T T G novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 APBA1 320 broad.mit.edu 37 9 72131197 72131197 + Silent SNP G A A novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 ASPN 54829 hgsc.bcm.edu 37 9 95237024 95237024 + Missense_Mutation SNP C C A novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 BAP1 8314 broad.mit.edu 37 3 52436397 52436397 + Frame_Shift_Del DEL C - - novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 C C C - C C Unknown Valid Somatic Phase_I WXS PGM Illumina GAIIx 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 C11orf41 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 33566837 33566837 + Missense_Mutation SNP C C T novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 C20orf108 0 hgsc.bcm.edu;ucsc.edu 37 20 54941313 54941314 + Frame_Shift_Ins INS - - T novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 C4orf37 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 98902354 98902354 + Missense_Mutation SNP C C T novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 DHX36 170506 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 154022915 154022915 + Silent SNP T T A novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 DISC1 27185 broad.mit.edu;hgsc.bcm.edu 37 1 231829671 231829671 + Missense_Mutation SNP T T A novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 DNAJC10 54431 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 183601013 183601013 + Missense_Mutation SNP C C T novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 DPYS 1807 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 105456595 105456595 + Missense_Mutation SNP A A G novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 DSCAM 1826 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 21 41385099 41385099 + Silent SNP G G A novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 ELK3 2004 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 96640767 96640767 + Missense_Mutation SNP C C A novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 FAM188A 80013 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 15879243 15879243 + Missense_Mutation SNP A A G novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 FAT4 79633 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 126328192 126328192 + Missense_Mutation SNP C C T novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 GATA2 2624 broad.mit.edu 37 3 128199926 128199926 + Missense_Mutation SNP T G G novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 GRHL3 57822 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 24666207 24666207 + Silent SNP C C G novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 LILRA2 11027 broad.mit.edu 37 19 55086976 55086976 + Silent SNP C T T novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 MFAP2 4237 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 17303611 17303611 + Missense_Mutation SNP G G C novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 MICAL2 9645 hgsc.bcm.edu 37 11 12243299 12243299 + Missense_Mutation SNP G G A novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 MYH7 4625 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 23894489 23894489 + Splice_Site SNP A A T rs111726379 bycluster TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 ORC4 5000 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 148693265 148693265 + Silent SNP A A T novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 PIGK 10026 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 77627328 77627328 + Missense_Mutation SNP G G T novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 PKD1L1 168507 broad.mit.edu;hgsc.bcm.edu 37 7 47869026 47869026 + Missense_Mutation SNP T T G novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 PTPRN2 5799 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 157475557 157475557 + Missense_Mutation SNP C C G rs144004975 alternate_allele TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 RBM28 55131 broad.mit.edu;hgsc.bcm.edu 37 7 127979814 127979814 + Silent SNP G G A novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 RSPH9 221421 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 43613007 43613007 + Missense_Mutation SNP T T C novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 SASS6 163786 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 100571393 100571393 + Missense_Mutation SNP G G T novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 SH3TC1 54436 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 8217896 8217896 + Missense_Mutation SNP G G T novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 SLC22A16 85413 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 110763477 110763477 + Missense_Mutation SNP C C T novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 SLC35A4 113829 broad.mit.edu;ucsc.edu 37 5 139947164 139947164 + Missense_Mutation SNP G T T novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 SLC38A8 146167 hgsc.bcm.edu;ucsc.edu 37 16 84066953 84066953 + Missense_Mutation SNP G G C rs142587413 bycluster;byfrequency;by1000genomes;alternate_allele TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 SMC5 23137 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 72897437 72897437 + Missense_Mutation SNP A A C novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 SNX14 57231 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 86258029 86258029 + Missense_Mutation SNP A A G novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 TACR3 6870 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 104512654 104512654 + Missense_Mutation SNP G G T novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 TEKT4 150483 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 95537442 95537442 + Missense_Mutation SNP C C A novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 TMEM168 64418 hgsc.bcm.edu;ucsc.edu 37 7 112412960 112412960 + Frame_Shift_Del DEL A A - novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 TMEM39B 55116 broad.mit.edu 37 1 32557586 32557586 + Missense_Mutation SNP G T T novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 TRAT1 50852 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 108572551 108572551 + Missense_Mutation SNP C C A novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 Unknown 0 broad.mit.edu 37 16 70268080 70268080 + RNA SNP T C C novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 VHL 7428 hgsc.bcm.edu;ucsc.edu 37 3 10188204 10188219 + Frame_Shift_Del DEL TTTGGCTCTTCAGAGA TTTGGCTCTTCAGAGA - novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 TTTGGCTCTTCAGAGA TTTGGCTCTTCAGAGA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00 ZNF687 57592 broad.mit.edu 37 1 151262327 151262328 + Frame_Shift_Ins INS - C C novel TCGA-BP-5174-01A-01D-1429-08 TCGA-BP-5174-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 53b5cf8d-f3cf-4e7e-91ec-b0c907d1c13f 7ad1d38e-234e-42e5-8518-258dc6c72e00