Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID AIDA 64853 hgsc.bcm.edu 37 1 222843559 222843559 + Missense_Mutation SNP T T A novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 ANKRD44 91526 hgsc.bcm.edu;ucsc.edu 37 2 197954719 197954719 + Missense_Mutation SNP C C T novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 ASPH 444 hgsc.bcm.edu;ucsc.edu 37 8 62577970 62577970 + Missense_Mutation SNP T T A novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 ATP13A2 23400 hgsc.bcm.edu 37 1 17318322 17318322 + Missense_Mutation SNP C C T novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 BRD4 23476 hgsc.bcm.edu;ucsc.edu 37 19 15366320 15366320 + Missense_Mutation SNP T T C novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 C3orf30 152405 hgsc.bcm.edu 37 3 118865300 118865300 + Silent SNP C C A novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 CACNA1D 776 hgsc.bcm.edu;ucsc.edu 37 3 53845146 53845146 + Missense_Mutation SNP A A G novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 CCDC88B 283234 hgsc.bcm.edu;ucsc.edu 37 11 64121227 64121227 + Missense_Mutation SNP G G A novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 COL15A1 1306 hgsc.bcm.edu 37 9 101748184 101748184 + Silent SNP C C A rs7045978 bycluster;byfrequency;by1000genomes;alternate_allele TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 CPAMD8 27151 hgsc.bcm.edu 37 19 17086920 17086920 + Missense_Mutation SNP C C G novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 CPSF2 53981 hgsc.bcm.edu;ucsc.edu 37 14 92604675 92604675 + Missense_Mutation SNP A A T novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 CTU2 348180 hgsc.bcm.edu 37 16 88781504 88781504 + Missense_Mutation SNP C C A novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 DCHS1 8642 hgsc.bcm.edu 37 11 6646503 6646503 + Missense_Mutation SNP C C A novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 FAM179B 23116 hgsc.bcm.edu 37 14 45514044 45514044 + Silent SNP A A G novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 FAM83G 644815 hgsc.bcm.edu;ucsc.edu 37 17 18882881 18882881 + Missense_Mutation SNP C C T novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 FGD1 2245 hgsc.bcm.edu;ucsc.edu 37 X 54475346 54475346 + Missense_Mutation SNP G G A novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 HLA-DQB1 3119 hgsc.bcm.edu 37 6 32632777 32632777 + Silent SNP C C T rs79502177 TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 HLX 3142 hgsc.bcm.edu;ucsc.edu 37 1 221055659 221055659 + Missense_Mutation SNP T T C novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 HNRPLL 92906 hgsc.bcm.edu;ucsc.edu 37 2 38800465 38800465 + Missense_Mutation SNP T T C novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 LARS2 23395 hgsc.bcm.edu 37 3 45583404 45583404 + Missense_Mutation SNP C C A novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 LGTN 100529141 hgsc.bcm.edu 37 1 206776435 206776435 + Missense_Mutation SNP C C T novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 MICAL3 57553 hgsc.bcm.edu;ucsc.edu 37 22 18382260 18382260 + Missense_Mutation SNP A A C novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 MORC2 22880 hgsc.bcm.edu 37 22 31328970 31328970 + Missense_Mutation SNP C C A novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 NUP153 9972 hgsc.bcm.edu 37 6 17637570 17637570 + Silent SNP A A G novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 PAK6 56924 hgsc.bcm.edu;ucsc.edu 37 15 40564426 40564426 + Missense_Mutation SNP C C T novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 PLEKHH1 57475 hgsc.bcm.edu;ucsc.edu 37 14 68040063 68040063 + Missense_Mutation SNP T T G novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 PPP6R1 22870 hgsc.bcm.edu 37 19 55751267 55751267 + Missense_Mutation SNP T T A novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 PRDM5 11107 hgsc.bcm.edu;ucsc.edu 37 4 121631520 121631520 + Silent SNP G G T novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 PRSS16 10279 hgsc.bcm.edu 37 6 27216901 27216901 + Silent SNP A A C novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 PTCD1 26024 hgsc.bcm.edu 37 7 99022803 99022803 + Missense_Mutation SNP G G T novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 RHO 6010 hgsc.bcm.edu 37 3 129249846 129249846 + Missense_Mutation SNP G G T novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 RPS3 6188 hgsc.bcm.edu 37 11 75113406 75113406 + Missense_Mutation SNP A A C novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 RS1 6247 hgsc.bcm.edu 37 X 18660196 18660196 + Silent SNP G G A novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 SDCCAG1 0 hgsc.bcm.edu;ucsc.edu 37 14 50312885 50312885 + Nonsense_Mutation SNP G G C novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 SDR9C7 121214 hgsc.bcm.edu 37 12 57323228 57323228 + Missense_Mutation SNP C C T novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 SERPINI1 5274 hgsc.bcm.edu;ucsc.edu 37 3 167508176 167508176 + Silent SNP C C T novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 SETD4 54093 hgsc.bcm.edu 37 21 37418057 37418057 + Silent SNP C C T novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 SKAP2 8935 hgsc.bcm.edu 37 7 26765559 26765559 + Missense_Mutation SNP A A C novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 SLC6A2 6530 hgsc.bcm.edu 37 16 55734212 55734212 + Silent SNP T T C novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 TAS2R38 5726 hgsc.bcm.edu 37 7 141672558 141672558 + Missense_Mutation SNP A A G novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 TIGD2 166815 hgsc.bcm.edu 37 4 90034133 90034133 + Missense_Mutation SNP G G T novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 TLR8 51311 hgsc.bcm.edu;ucsc.edu 37 X 12937473 12937473 + Missense_Mutation SNP G G A novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 TMPRSS12 283471 hgsc.bcm.edu;ucsc.edu 37 12 51252806 51252806 + Missense_Mutation SNP A A G novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 UBN1 29855 hgsc.bcm.edu 37 16 4911047 4911047 + Missense_Mutation SNP T T C novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 URGCP 55665 hgsc.bcm.edu 37 7 43918276 43918276 + Silent SNP G G C rs144106376 alternate_allele TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 VCP 7415 hgsc.bcm.edu;ucsc.edu 37 9 35059494 35059494 + Missense_Mutation SNP G G A novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1 XPNPEP2 7512 hgsc.bcm.edu 37 X 128886126 128886126 + Missense_Mutation SNP G G T novel TCGA-BP-4346-01A-01D-1366-10 TCGA-BP-4346-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 20735253-1ba8-41c9-b4ab-682c1af79b9d 69e027cf-071a-4b3e-97de-c450555f38c1