Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID AARS 16 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 70296355 70296355 + Frame_Shift_Del DEL C C - novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d AATK 9625 broad.mit.edu;hgsc.bcm.edu 37 17 79094705 79094705 + Missense_Mutation SNP G G T novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d AHNAK 79026 hgsc.bcm.edu 37 11 62303555 62303556 + In_Frame_Ins INS - - CTC novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d ANKRD7 56311 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 117874795 117874795 + Missense_Mutation SNP T T C novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d APOL5 80831 broad.mit.edu;hgsc.bcm.edu 37 22 36123112 36123112 + Missense_Mutation SNP G G T novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d ATIC 471 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 216211658 216211658 + Silent SNP T T C novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d CA11 770 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 49147826 49147826 + Missense_Mutation SNP C C G novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d CACYBP 27101 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 174973753 174973753 + Nonsense_Mutation SNP C C T novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d CCDC73 493860 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 32636393 32636393 + Missense_Mutation SNP A A T novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d CLIC6 54102 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 21 36081036 36081036 + Missense_Mutation SNP C C G novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d CLN8 2055 broad.mit.edu;ucsc.edu 37 8 1728492 1728492 + Missense_Mutation SNP T A A novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d EMR1 2015 hgsc.bcm.edu;ucsc.edu 37 19 6903923 6903923 + Missense_Mutation SNP G G C novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d EPS8 2059 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 15803757 15803757 + Missense_Mutation SNP C C G novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d FBN2 2201 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 127673799 127673799 + Missense_Mutation SNP T T A novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d FGL2 10875 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 76829078 76829078 + Silent SNP T T C novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d FOXK1 221937 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 4780487 4780487 + Silent SNP C C T novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d GBGT1 26301 broad.mit.edu;hgsc.bcm.edu 37 9 136029453 136029453 + Missense_Mutation SNP C C A novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d GFI1B 8328 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 135863634 135863634 + Missense_Mutation SNP G G T rs145562579 alternate_allele TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d GNPTAB 79158 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 102163955 102163955 + Missense_Mutation SNP A A T novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d GOLGA6L10 647042 broad.mit.edu 37 15 82635117 82635117 + RNA SNP T C C novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d GOLGA6L5 374650 broad.mit.edu 37 15 85053188 85053188 + RNA SNP C G G rs76166627 TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d HERC2 8924 broad.mit.edu;hgsc.bcm.edu 37 15 28387457 28387457 + Missense_Mutation SNP C C A novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d HGC6.3 100128124 hgsc.bcm.edu 37 6 168377071 168377071 + Missense_Mutation SNP G G A novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d HNRNPA3P1 10151 broad.mit.edu 37 10 44285141 44285141 + Missense_Mutation SNP C T T novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d HSD3B1 3283 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 120050234 120050234 + Missense_Mutation SNP G G C novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d HVCN1 84329 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 111089162 111089162 + Missense_Mutation SNP T T C novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d IP6K2 51447 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 48732607 48732607 + Missense_Mutation SNP G G T novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d IZUMO1 284359 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 49249008 49249008 + Nonsense_Mutation SNP C C A novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d KCNJ18 100134444 hgsc.bcm.edu 37 17 21318663 21318663 + Silent SNP G G A rs72846666 bycluster;byfrequency;by1000genomes TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d KIAA0528 0 hgsc.bcm.edu;ucsc.edu 37 12 22606900 22606900 + Frame_Shift_Del DEL A A - novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d KIF1B 23095 broad.mit.edu;ucsc.edu 37 1 10412718 10412718 + Missense_Mutation SNP G A A novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d LAMA2 3908 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 129588309 129588309 + Missense_Mutation SNP C C T novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d LIPE 3991 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 42930828 42930828 + Silent SNP C C T novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d LMBR1 64327 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 156518213 156518213 + Silent SNP A A G novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d LOC201651 201651 broad.mit.edu 37 3 151502565 151502566 + RNA INS - AG AG rs10680776 bycluster;by1000genomes TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d LOC283922 283922 broad.mit.edu 37 16 74372753 74372753 + Missense_Mutation SNP T A A novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d LOC645752 645752 broad.mit.edu 37 15 78208251 78208251 + Silent SNP C T T novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d LRGUK 136332 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 133812165 133812165 + Silent SNP T T C novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d MAP4K3 8491 hgsc.bcm.edu;ucsc.edu 37 2 39564675 39564675 + Frame_Shift_Del DEL T T - novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d MAP7D1 55700 broad.mit.edu 37 1 36644331 36644333 + In_Frame_Del DEL GGA - - novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 GGA GGA . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d MGA 23269 hgsc.bcm.edu;ucsc.edu 37 15 42003437 42003437 + Frame_Shift_Del DEL C C - novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d NBPF10 100132406 broad.mit.edu 37 1 145323667 145323667 + Missense_Mutation SNP C G G novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d NEDD4 4734 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 56208589 56208589 + Silent SNP A A G novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d NFX1 4799 broad.mit.edu 37 9 33351750 33351750 + Missense_Mutation SNP A G G novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d OSBPL5 114879 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 3109542 3109542 + Missense_Mutation SNP G G A rs150730024 TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d PAPOLG 64895 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 61019416 61019416 + Missense_Mutation SNP A A T novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d PBRM1 55193 hgsc.bcm.edu;ucsc.edu 37 3 52682446 52682462 + Frame_Shift_Del DEL TGTAGCTTCCATTCTAC TGTAGCTTCCATTCTAC - novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 TGTAGCTTCCATTCTAC TGTAGCTTCCATTCTAC . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d PFKL 5211 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 21 45742915 45742915 + Missense_Mutation SNP G G A novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d PHACTR3 116154 broad.mit.edu;hgsc.bcm.edu 37 20 58342420 58342420 + Missense_Mutation SNP G G A novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d PI4KA 5297 broad.mit.edu;hgsc.bcm.edu 37 22 21081564 21081564 + Missense_Mutation SNP G G A novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d PLXDC2 84898 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 20106053 20106053 + Missense_Mutation SNP G G A novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d PPP1R2P9 80316 broad.mit.edu 37 X 42637261 42637261 + Frame_Shift_Del DEL A - - novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d PTPRD 5789 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 8500875 8500875 + Silent SNP A A T novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d RAB3GAP1 22930 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 135926271 135926271 + Missense_Mutation SNP C C A novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d RB1CC1 9821 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 53586507 53586507 + Missense_Mutation SNP A A T novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d RBMXL3 139804 broad.mit.edu 37 X 114425790 114425790 + Missense_Mutation SNP G A A novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d RSPH3 83861 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 159420742 159420742 + Silent SNP A A T novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d SAE1 10055 hgsc.bcm.edu 37 19 47646781 47646782 + Frame_Shift_Ins INS - - T novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d SF3A1 10291 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 30736281 30736281 + Missense_Mutation SNP C C G novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d SMC3 9126 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 112360237 112360237 + Missense_Mutation SNP G G C novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d SMC3 9126 broad.mit.edu;ucsc.edu 37 10 112360239 112360239 + Missense_Mutation SNP A T T novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d SPEN 23013 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 16260060 16260060 + Missense_Mutation SNP A A T novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d ST3GAL5 8869 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 86071563 86071563 + Missense_Mutation SNP G G C novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d THOC2 57187 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 122769988 122769988 + Missense_Mutation SNP G G C novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d TP73 7161 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 3599704 3599704 + Missense_Mutation SNP T T C novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d TRIM5 85363 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 5699642 5699642 + Missense_Mutation SNP G G C novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d TRIP11 9321 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 92470128 92470128 + Missense_Mutation SNP G G T novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d TRIP11 9321 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 92470129 92470129 + Silent SNP C C T novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d TTC26 79989 broad.mit.edu;hgsc.bcm.edu 37 7 138822685 138822685 + Silent SNP G G A novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d TYW1 55253 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 66474585 66474585 + Missense_Mutation SNP C C A novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d USH1C 10083 broad.mit.edu;ucsc.edu 37 11 17544964 17544964 + Splice_Site SNP A C C novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d USP38 84640 broad.mit.edu;hgsc.bcm.edu 37 4 144106648 144106648 + Silent SNP G G A novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d VHL 7428 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 10191482 10191482 + Nonsense_Mutation SNP A A T novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d VHL 7428 hgsc.bcm.edu 37 3 10183664 10183664 + Missense_Mutation SNP C C T novel TCGA-B0-5695-01A-11W-1584-10 TCGA-B0-5695-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina MiSeq 06b449c9-8ada-46d7-b772-9898a5df5256 e82fdc8b-d411-410a-9b4c-f66f9077be6d VPS13B 157680 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 100847487 100847487 + Missense_Mutation SNP C C G novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d VSIG1 340547 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 107304759 107304759 + Silent SNP C C T novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d YTHDF1 54915 broad.mit.edu;ucsc.edu 37 20 61834018 61834018 + Missense_Mutation SNP A G G novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d ZKSCAN1 7586 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 99631591 99631591 + Missense_Mutation SNP C C G novel TCGA-B0-5695-01A-11D-1534-10 TCGA-B0-5695-11A-01D-1534-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 0202c44b-88d5-435d-9c25-300ca96537d4 e82fdc8b-d411-410a-9b4c-f66f9077be6d