Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ASCC3 10973 hgsc.bcm.edu;ucsc.edu 37 6 101296058 101296058 + Missense_Mutation SNP G G C novel TCGA-B0-4849-01A-01D-1361-10 TCGA-B0-4849-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID fb7a0380-5949-46c4-8f7a-c24f91eb31ff e72cee0e-92b2-49b4-926d-1f2b0797672b C10orf118 55088 hgsc.bcm.edu;ucsc.edu 37 10 115891000 115891000 + Missense_Mutation SNP C C G novel TCGA-B0-4849-01A-01D-1361-10 TCGA-B0-4849-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID fb7a0380-5949-46c4-8f7a-c24f91eb31ff e72cee0e-92b2-49b4-926d-1f2b0797672b C10orf118 55088 hgsc.bcm.edu;ucsc.edu 37 10 115891083 115891083 + Silent SNP A A G novel TCGA-B0-4849-01A-01D-1361-10 TCGA-B0-4849-11A-01D-1361-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID fb7a0380-5949-46c4-8f7a-c24f91eb31ff e72cee0e-92b2-49b4-926d-1f2b0797672b CLEC12A 160364 hgsc.bcm.edu;ucsc.edu 37 12 10131627 10131627 + Silent SNP C C T novel TCGA-B0-4849-01A-01D-1361-10 TCGA-B0-4849-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID fb7a0380-5949-46c4-8f7a-c24f91eb31ff e72cee0e-92b2-49b4-926d-1f2b0797672b CNTNAP2 26047 hgsc.bcm.edu;ucsc.edu 37 7 147092819 147092819 + Missense_Mutation SNP G G T novel TCGA-B0-4849-01A-01D-1361-10 TCGA-B0-4849-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID fb7a0380-5949-46c4-8f7a-c24f91eb31ff e72cee0e-92b2-49b4-926d-1f2b0797672b EGFR 1956 hgsc.bcm.edu 37 7 55259454 55259454 + Missense_Mutation SNP C C A novel TCGA-B0-4849-01A-01D-1361-10 TCGA-B0-4849-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID fb7a0380-5949-46c4-8f7a-c24f91eb31ff e72cee0e-92b2-49b4-926d-1f2b0797672b EIF4G2 1982 hgsc.bcm.edu;ucsc.edu 37 11 10825559 10825559 + Nonsense_Mutation SNP C C A novel TCGA-B0-4849-01A-01D-1361-10 TCGA-B0-4849-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID fb7a0380-5949-46c4-8f7a-c24f91eb31ff e72cee0e-92b2-49b4-926d-1f2b0797672b EMILIN2 84034 hgsc.bcm.edu 37 18 2890860 2890860 + Silent SNP G G T novel TCGA-B0-4849-01A-01D-1361-10 TCGA-B0-4849-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID fb7a0380-5949-46c4-8f7a-c24f91eb31ff e72cee0e-92b2-49b4-926d-1f2b0797672b F5 2153 hgsc.bcm.edu 37 1 169510437 169510437 + Silent SNP T T C novel TCGA-B0-4849-01A-01D-1361-10 TCGA-B0-4849-11A-01D-1361-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID fb7a0380-5949-46c4-8f7a-c24f91eb31ff e72cee0e-92b2-49b4-926d-1f2b0797672b FAT4 79633 hgsc.bcm.edu;ucsc.edu 37 4 126373477 126373477 + Missense_Mutation SNP A A C novel TCGA-B0-4849-01A-01D-1361-10 TCGA-B0-4849-11A-01D-1361-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID fb7a0380-5949-46c4-8f7a-c24f91eb31ff e72cee0e-92b2-49b4-926d-1f2b0797672b GBA 2629 hgsc.bcm.edu 37 1 155209553 155209553 + Missense_Mutation SNP C C G novel TCGA-B0-4849-01A-01D-1361-10 TCGA-B0-4849-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID fb7a0380-5949-46c4-8f7a-c24f91eb31ff e72cee0e-92b2-49b4-926d-1f2b0797672b KRT75 9119 hgsc.bcm.edu;ucsc.edu 37 12 52818423 52818423 + Missense_Mutation SNP G G T novel TCGA-B0-4849-01A-01D-1361-10 TCGA-B0-4849-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID fb7a0380-5949-46c4-8f7a-c24f91eb31ff e72cee0e-92b2-49b4-926d-1f2b0797672b LAMB3 3914 hgsc.bcm.edu 37 1 209807972 209807972 + Silent SNP G G A rs1130667 bycluster;byfrequency;byhapmap;by1000genomes TCGA-B0-4849-01A-01D-1361-10 TCGA-B0-4849-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID fb7a0380-5949-46c4-8f7a-c24f91eb31ff e72cee0e-92b2-49b4-926d-1f2b0797672b LRSAM1 90678 hgsc.bcm.edu;ucsc.edu 37 9 130241215 130241215 + Silent SNP C C T novel TCGA-B0-4849-01A-01D-1361-10 TCGA-B0-4849-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID fb7a0380-5949-46c4-8f7a-c24f91eb31ff e72cee0e-92b2-49b4-926d-1f2b0797672b MUC2 4583 hgsc.bcm.edu 37 11 1092620 1092621 + In_Frame_Ins INS - - AAT novel TCGA-B0-4849-01A-01D-1361-10 TCGA-B0-4849-11A-01D-1361-10 - - . . . . Unknown Untested Somatic Phase_I WXS none SOLID fb7a0380-5949-46c4-8f7a-c24f91eb31ff e72cee0e-92b2-49b4-926d-1f2b0797672b MYH13 8735 hgsc.bcm.edu 37 17 10219054 10219054 + Nonsense_Mutation SNP G G A novel TCGA-B0-4849-01A-01D-1361-10 TCGA-B0-4849-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID fb7a0380-5949-46c4-8f7a-c24f91eb31ff e72cee0e-92b2-49b4-926d-1f2b0797672b PBRM1 55193 hgsc.bcm.edu;ucsc.edu 37 3 52678735 52678735 + Nonsense_Mutation SNP G G T novel TCGA-B0-4849-01A-01D-1361-10 TCGA-B0-4849-11A-01D-1361-10 G G G T G G Unknown Valid Somatic Phase_I WXS PGM SOLID fb7a0380-5949-46c4-8f7a-c24f91eb31ff e72cee0e-92b2-49b4-926d-1f2b0797672b SLC4A4 8671 hgsc.bcm.edu;ucsc.edu 37 4 72338634 72338634 + Missense_Mutation SNP T T C novel TCGA-B0-4849-01A-01D-1361-10 TCGA-B0-4849-11A-01D-1361-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID fb7a0380-5949-46c4-8f7a-c24f91eb31ff e72cee0e-92b2-49b4-926d-1f2b0797672b TPH1 7166 hgsc.bcm.edu;ucsc.edu 37 11 18050851 18050851 + Silent SNP G G A rs150277860 bycluster;byfrequency;by1000genomes TCGA-B0-4849-01A-01D-1361-10 TCGA-B0-4849-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID fb7a0380-5949-46c4-8f7a-c24f91eb31ff e72cee0e-92b2-49b4-926d-1f2b0797672b TRPC4 7223 hgsc.bcm.edu;ucsc.edu 37 13 38266223 38266223 + Missense_Mutation SNP C C A novel TCGA-B0-4849-01A-01D-1361-10 TCGA-B0-4849-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID fb7a0380-5949-46c4-8f7a-c24f91eb31ff e72cee0e-92b2-49b4-926d-1f2b0797672b VPS16 64601 hgsc.bcm.edu;ucsc.edu 37 20 2844667 2844667 + Missense_Mutation SNP G G T novel TCGA-B0-4849-01A-01D-1361-10 TCGA-B0-4849-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID fb7a0380-5949-46c4-8f7a-c24f91eb31ff e72cee0e-92b2-49b4-926d-1f2b0797672b WDR47 22911 hgsc.bcm.edu 37 1 109553950 109553950 + Missense_Mutation SNP A A T novel TCGA-B0-4849-01A-01D-1361-10 TCGA-B0-4849-11A-01D-1361-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID fb7a0380-5949-46c4-8f7a-c24f91eb31ff e72cee0e-92b2-49b4-926d-1f2b0797672b ZEB1 6935 hgsc.bcm.edu;ucsc.edu 37 10 31812969 31812969 + Missense_Mutation SNP T T C novel TCGA-B0-4849-01A-01D-1361-10 TCGA-B0-4849-11A-01D-1361-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID fb7a0380-5949-46c4-8f7a-c24f91eb31ff e72cee0e-92b2-49b4-926d-1f2b0797672b ZNF33A 7581 hgsc.bcm.edu;ucsc.edu 37 10 38343549 38343549 + Missense_Mutation SNP A A T novel TCGA-B0-4849-01A-01D-1361-10 TCGA-B0-4849-11A-01D-1361-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID fb7a0380-5949-46c4-8f7a-c24f91eb31ff e72cee0e-92b2-49b4-926d-1f2b0797672b ZNF706 51123 hgsc.bcm.edu;ucsc.edu 37 8 102213933 102213933 + Missense_Mutation SNP T T C novel TCGA-B0-4849-01A-01D-1361-10 TCGA-B0-4849-11A-01D-1361-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID fb7a0380-5949-46c4-8f7a-c24f91eb31ff e72cee0e-92b2-49b4-926d-1f2b0797672b ZNF800 168850 hgsc.bcm.edu;ucsc.edu 37 7 127017270 127017270 + Missense_Mutation SNP A A T novel TCGA-B0-4849-01A-01D-1361-10 TCGA-B0-4849-11A-01D-1361-10 A A A T A A Unknown Valid Somatic Phase_I WXS PGM SOLID fb7a0380-5949-46c4-8f7a-c24f91eb31ff e72cee0e-92b2-49b4-926d-1f2b0797672b